WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g08370 FvH4_4g08370 FvH4_4g08370 FvH4_4g08370 FvH4_4g08370 FvH4_4g08370 |
| pyrus_communis | pycom12g10530 pycom12g16180 |
| rosa_chinensis | RchiOBHm_Chr6g0296391 |
| rosa_laevigata | RLG00000027043 |
| rosa_multiflora | Rmu_co8421439.1_g000001 Rmu_sc0011275.1_g000003 |
| rosa_samantha | Rh2BG113800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 83 |
| Acc36I | ACCTGC | 1 cut(s) | 105 |
| AciI | CCGC | 1 cut(s) | 163 |
| AcoI | YGGCCR | 1 cut(s) | 171 |
| AcyI | GRCGYC | 2 cut(s) | 80, 134 |
| AfaI | GTAC | 2 cut(s) | 266, 278 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AluBI | AGCT | 1 cut(s) | 110 |
| AluI | AGCT | 1 cut(s) | 110 |
| AoxI | GGCC | 2 cut(s) | 27, 171 |
| ApeKI | GCWGC | 1 cut(s) | 107 |
| AspS9I | GGNCC | 1 cut(s) | 94 |
| AvaII | GGWCC | 1 cut(s) | 94 |
| BalI | TGGCCA | 1 cut(s) | 173 |
| BbvI | GCAGC | 1 cut(s) | 119 |
| BccI | CCATC | 2 cut(s) | 133, 182 |
| BceAI | ACGGC | 2 cut(s) | 14, 147 |
| BfuAI | ACCTGC | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 108, 164 |
| BlsI | GCNGC | 2 cut(s) | 109, 165 |
| BmcAI | AGTACT | 1 cut(s) | 278 |
| Bme18I | GGWCC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 1 cut(s) | 94 |
| BsaHI | GRCGYC | 2 cut(s) | 80, 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseMII | CTCAG | 1 cut(s) | 65 |
| BseXI | GCAGC | 1 cut(s) | 119 |
| BshFI | GGCC | 2 cut(s) | 29, 173 |
| BslFI | GGGAC | 1 cut(s) | 193 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BsmFI | GGGAC | 1 cut(s) | 193 |
| BsnI | GGCC | 2 cut(s) | 29, 173 |
| BspACI | CCGC | 1 cut(s) | 163 |
| BspANI | GGCC | 2 cut(s) | 29, 173 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BspMI | ACCTGC | 1 cut(s) | 105 |
| BssNI | GRCGYC | 2 cut(s) | 80, 134 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 281 |
| BstACI | GRCGYC | 2 cut(s) | 80, 134 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 61 |
| BstDEI | CTNAG | 2 cut(s) | 51, 215 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 61, 269 |
| BstV1I | GCAGC | 1 cut(s) | 119 |
| BsuRI | GGCC | 2 cut(s) | 29, 173 |
| BveI | ACCTGC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 1 cut(s) | 94 |
| CseI | GACGC | 1 cut(s) | 123 |
| Csp6I | GTAC | 2 cut(s) | 265, 277 |
| CviJI | RGCY | 5 cut(s) | 29, 110, 166, 173, 247 |
| CviKI_1 | RGCY | 5 cut(s) | 29, 110, 166, 173, 247 |
| CviQI | GTAC | 2 cut(s) | 265, 277 |
| DdeI | CTNAG | 2 cut(s) | 51, 215 |
| EaeI | YGGCCR | 1 cut(s) | 171 |
| Eco47I | GGWCC | 1 cut(s) | 94 |
| FaiI | YATR | 2 cut(s) | 77, 117 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 34 |
| FaqI | GGGAC | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 164 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 164 |
| GluI | GCNGC | 2 cut(s) | 108, 164 |
| HaeIII | GGCC | 2 cut(s) | 29, 173 |
| HgaI | GACGC | 1 cut(s) | 123 |
| Hin1I | GRCGYC | 2 cut(s) | 80, 134 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HinfI | GANTC | 1 cut(s) | 15 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 226 |
| Hpy188I | TCNGA | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 1 cut(s) | 178 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 226 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 281 |
| HpyCH4IV | ACGT | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 107, 240 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 61, 269 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 215 |
| HpySE526I | ACGT | 1 cut(s) | 80 |
| Hsp92I | GRCGYC | 2 cut(s) | 80, 134 |
| LpnPI | CCDG | 2 cut(s) | 110, 155 |
| Lsp1109I | GCAGC | 1 cut(s) | 119 |
| MaeII | ACGT | 1 cut(s) | 80 |
| MlsI | TGGCCA | 1 cut(s) | 173 |
| MluNI | TGGCCA | 1 cut(s) | 173 |
| MlyI | GAGTC | 1 cut(s) | 9 |
| Mox20I | TGGCCA | 1 cut(s) | 173 |
| MscI | TGGCCA | 1 cut(s) | 173 |
| MseI | TTAA | 1 cut(s) | 251 |
| Msp20I | TGGCCA | 1 cut(s) | 173 |
| MspA1I | CMGCKG | 1 cut(s) | 163 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 61, 269 |
| PkrI | GCNGC | 2 cut(s) | 109, 165 |
| PleI | GAGTC | 1 cut(s) | 9 |
| PpsI | GAGTC | 1 cut(s) | 9 |
| PspPI | GGNCC | 1 cut(s) | 94 |
| RsaI | GTAC | 2 cut(s) | 266, 278 |
| RsaNI | GTAC | 2 cut(s) | 265, 277 |
| SaqAI | TTAA | 1 cut(s) | 251 |
| SatI | GCNGC | 2 cut(s) | 108, 164 |
| Sau96I | GGNCC | 1 cut(s) | 94 |
| ScaI | AGTACT | 1 cut(s) | 278 |
| SchI | GAGTC | 1 cut(s) | 9 |
| SetI | ASST | 3 cut(s) | 83, 99, 112 |
| SgeI | CNNG | 9 cut(s) | 22, 80, 103, 109, 113, 155, 182, 190, 241 |
| SinI | GGWCC | 1 cut(s) | 94 |
| SsiI | CCGC | 1 cut(s) | 163 |
| TaaI | ACNGT | 2 cut(s) | 59, 281 |
| TaiI | ACGT | 1 cut(s) | 83 |
| TaqI | TCGA | 1 cut(s) | 150 |
| TatI | WGTACW | 1 cut(s) | 276 |
| TauI | GCSGC | 1 cut(s) | 166 |
| Tru1I | TTAA | 1 cut(s) | 251 |
| Tru9I | TTAA | 1 cut(s) | 251 |
| TseI | GCWGC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 94 |
| ZraI | GACGTC | 1 cut(s) | 81 |
| ZrmI | AGTACT | 1 cut(s) | 278 |