RchiOBHm_Chr7g0194171

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
12328494 .. 12331079
2586 bp
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UTR
Exon/CDS
Intron
PRQ17364

Sequence Viewer

Length: 186 bp
ATGCAAGAAACACTTTATCTCATGGTGACATTGTTAGACCAATATCTTTCTGAAGTCCCAATTAAGAAGAATGAAATGCAATTAGTCAAAGAGTTGATTAGCATCTCAGATGAGTCATACACTAGAGACCAGGTGCTTGGAATGGCAATATGTGTCCGTACTATTAAGGGATTTTCATTCCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

7.07

Weight (kDa)

4.81

Isoelectric Point (pI)

10.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019780)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 72
AfaI GTAC 1 cut(s) 160
AjnI CCWGG 1 cut(s) 129
Alw26I GTCTC 1 cut(s) 120
AsuHPI GGTGA 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 131
BcoDI GTCTC 1 cut(s) 120
BfaI CTAG 1 cut(s) 123
Bme1390I CCNGG 1 cut(s) 131
BmrFI CCNGG 1 cut(s) 131
BmsI GCATC 1 cut(s) 111
BsaBI GATNNNNATC 1 cut(s) 101
BsaI GGTCTC 1 cut(s) 120
Bse8I GATNNNNATC 1 cut(s) 101
BseBI CCWGG 1 cut(s) 131
BseJI GATNNNNATC 1 cut(s) 101
BseMII CTCAG 1 cut(s) 120
BslFI GGGAC 1 cut(s) 41
BsmAI GTCTC 1 cut(s) 120
BsmFI GGGAC 1 cut(s) 41
Bso31I GGTCTC 1 cut(s) 120
BspCNI CTCAG 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 120
Bst2UI CCWGG 1 cut(s) 131
BstDEI CTNAG 1 cut(s) 106
BstMAI GTCTC 1 cut(s) 120
BstNI CCWGG 1 cut(s) 131
BstSCI CCNGG 1 cut(s) 129
BstXI CCANNNNNNTGG 1 cut(s) 137
CsiI ACCWGGT 1 cut(s) 129
Csp6I GTAC 1 cut(s) 159
CviAII CATG 1 cut(s) 22
CviQI GTAC 1 cut(s) 159
DdeI CTNAG 1 cut(s) 106
Eco31I GGTCTC 1 cut(s) 120
Eco57I CTGAAG 1 cut(s) 72
EcoRII CCWGG 1 cut(s) 129
FaeI CATG 1 cut(s) 25
FaiI YATR 4 cut(s) 23, 118, 151, 184
FalI AAGNNNNNCTT 1 cut(s) 29
FaqI GGGAC 1 cut(s) 41
FatI CATG 1 cut(s) 21
FspBI CTAG 1 cut(s) 123
Hin1II CATG 1 cut(s) 25
HinfI GANTC 1 cut(s) 113
HphI GGTGA 1 cut(s) 37
Hpy188I TCNGA 2 cut(s) 52, 109
HpyCH4V TGCA 2 cut(s) 4, 79
HpyF3I CTNAG 1 cut(s) 106
Hsp92II CATG 1 cut(s) 25
LpnPI CCDG 2 cut(s) 116, 143
LweI GCATC 1 cut(s) 111
MabI ACCWGGT 1 cut(s) 129
MaeI CTAG 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 25
MboII GAAGA 1 cut(s) 79
MluCI AATT 2 cut(s) 60, 80
MlyI GAGTC 1 cut(s) 122
MseI TTAA 2 cut(s) 63, 165
MslI CAYNNNNRTG 1 cut(s) 181
MspR9I CCNGG 1 cut(s) 131
MvaI CCWGG 1 cut(s) 131
NlaIII CATG 1 cut(s) 25
NmuCI GTSAC 1 cut(s) 25
PleI GAGTC 1 cut(s) 121
PpsI GAGTC 1 cut(s) 121
Psp6I CCWGG 1 cut(s) 129
PspGI CCWGG 1 cut(s) 129
RsaI GTAC 1 cut(s) 160
RsaNI GTAC 1 cut(s) 159
RseI CAYNNNNRTG 1 cut(s) 181
SaqAI TTAA 2 cut(s) 63, 165
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 1 cut(s) 131
SetI ASST 1 cut(s) 135
SexAI ACCWGGT 1 cut(s) 129
SfaNI GCATC 1 cut(s) 111
SgeI CNNG 6 cut(s) 17, 34, 135, 142, 143, 149
SmiMI CAYNNNNRTG 1 cut(s) 181
Sse9I AATT 2 cut(s) 60, 80
SspMI CTAG 1 cut(s) 123
StyD4I CCNGG 1 cut(s) 129
TasI AATT 2 cut(s) 60, 80
Tru1I TTAA 2 cut(s) 63, 165
Tru9I TTAA 2 cut(s) 63, 165
TseFI GTSAC 1 cut(s) 25
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 2 cut(s) 87, 165
TspGWI ACGGA 1 cut(s) 146
XspI CTAG 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.