Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008311

Physical Location & Seq

Genomic Coordinates Reverse (-)

13347673 .. 13350165

Gene Structure 2493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17486

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGAACAATTCCGGCGTATCGGAGAGGTTTTGGGGAGTATGAAGGCACTGATGGTCTTACAAGATGGTATCAAGATCAATCAAGGGCAGTGCTGTCTATTGCTTGATATCTTGACTTTGGCATTTGAGACAATTGGGGAGGAGATCAGGCTGAACCTGAAATTGGAGGAGAAAAAGACCAAATGGAAGGGCCTAGATGAACCTCTGAGGGAGCTCTACACAGTTTTCAGAGAAAGCGAGATTTACATCAGAAGCTGCATGGATGCCAAAGACTGGTGGGGCAAAGCAGTCATCCTCCATCAGAACAAGGACTGTGTCGAATTTTACATACATAATTTGTTCTGCTACTTCTCGGCTGTCATTGAGGCAATCGAGAACGCTGGAGAGATTGCGGGGCTGGACCAGGATGAGATGCAGAAGAAGAGGATTGTGCTTAAGAGGAAGTATGATAAGGATTGGAATGACCCGAAACTTTTCCAGTGGAGATTTGGGAAGCAGTATTTGGTCCCGAAGACGATGTGCAAAAGGTTGGAGAGTGCTTGGAGGGAAGATAGATGGCGGCTCATTGAAGCACTCAAGGAGAAGAAATTAGCTGTTGGTTTGACAAAGAATGAGCAGCAGCTCGGAGACTTGCTGCTTAAGAAACTACACGGGGCAGAGTTTTTGAATGGGAAACTGTTTCCGAGCTCAATTTTATTAGGAGCTAAGGATTACAACATTAAGCGGCGGTTAGGAAATGGACGGCAGTACAAGGAAATCCACTGGTTGGGGCACAACTTTGCCATGAGACATTTCTTTGGGGAACTTGAACCGTTCAGTTCTGAGATTTCGACTCTCCTTTCACTCTCCCACCCCAGTGTACTGCAATACCTTTGCGGGTTTTATGATGAAGATAAGAAGGAATGCTTCCTTGTTATGGAGTTGATGAGCAAGGATCTCTGTTGCTACATGAAGGAGAATTGCGGCGCAAGAAGGCAGATCTTGTTCTCTCTCCCAGTGGTGGTTGATATCATGCTTCAGATTGCAAGAGGCATGGAGTATCTCCACTCCAGAAAGATATACCATGGTGACTTGAACCCTTTCAATATATTTCTCAAGGCAAGGAGCTCTACAGAAGGTTTCTTTCAAGCAAAAGTCTCCGGTTTTGGTTTGACATCTGCCCAAAAGAAACCTACTTGCCGAAACTCACAGAAACAGCAGCAGAAGAAACATGAAATCGACCCTTTGATTTGGTGTGCCCCGGAAGTCCTAGCTGAGCAAGAACAAACAGGAAATACCTTTGTCCATTCGAAATTCACAGAGAAAGCAGACGTGTACAGCTTTGGGATGCTTTGCTTTGAGCTCTTGACTGGGAAGATCCCTTTTGAAGATTCACATCTCCAAGGGGACAAGATGAGTCACACTATAAGAGCAGGAGGGAGGCCCCTTTTTCCATTCCCTTCACCAAAGTACCTTGTCAATTTAACCAAGAGGTGCTGGCACTCTGACCCGTCTCAGCGCCTGAGTTTCTCATCCATTTGCAGGATCTTACGCTACATAAAGAAATTCCTGGCCTTGAACCCTGATGTTGATCAGCCACCAATACTCCAATCCCCTTCCACGGACTTTTGTGAAATAGAGACATGGTTCCAGAAGCATTACAAGGCAATGGGGCATGCTGATGCAGCCTCCATCTCACAAATTCCATTCCAAATGTTTTCTTATAGACTTGGAGAGATGGACAAGACTCCTGGCTTGATCAGGATCAAGAGTTTGGATTCTGTGAGTGAAACCGCTTCGATGTTTAAGGCTGAAGAAGAAGCCACTCCTGTGATTGACAGTCTCACCGTTACAGATGATACAAGGTCTTTTTTCTCTGATGCGAGGTCACTTTATGATGTGAGATCAGTTTTTTCCGAGGCGCCAATGAAGAAAACTCTCAGTGCAAAGAAACGTTCAGAATTGAGGGGCAGAAAAGCCTCAGGTCCTTCACAAGCACCAACAACATCAAGAATTTCCTTGCCCAAACTTCCGACACCAAAGCTCTCGTCGCCAAAACTTCAGTACTCAAAACTCCCACCGTCGAAAGTTGCTTCGCCAAAAAGTTCATTTGGTCGCAGTTCAATGACTAACAAGACCAGTCCACCACTGAGTTGTATAAGCTCCAGGAACTCCATGAGTATGAGTATGAGCCCAAGGTATCCTATGACTATGAGTATGAGCCCAAGGCATCCTATGAGTGCGACTCGAGGCAATAGCTGCCGACCGAGAGGTCATGTCTCGGATTCCGATTTACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1221 Pkinase_Tyr

Protein Analysis

759

Amino Acids

86.91

Weight (kDa)

9.24

Isoelectric Point (pI)

59.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1221	PF06760	21 - 234	4.8e-103	Protein of unknown function (DUF1221)
PK_Tyr_Ser-Thr	PF07714	270 - 509	6.4e-38	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	272 - 507	1.6e-30	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64300 AT1G64300 AT5G41730 AT5G41730
fragaria_vesca	FvH4_5g03980 FvH4_5g03980 FvH4_5g03980
malus_domestica	MD06G1101300.v1.1 MD14G1121000.v1.1
prunus_persica	Prupe.5G114700_v2.0.a1 Prupe.5G114700_v2.0.a1
pyrus_communis	pycom06g09650
rosa_chinensis	RchiOBHm_Chr7g0195511
rosa_laevigata	RLG00000004113
rosa_multiflora	Rmu_sc0007727.1_g000023 Rmu_ssc0000078.1_g000002
rosa_rugosa	Rorug07G0023900
rosa_samantha	Rh7AG151500 Rh7BG153200 Rh7CG156700 Rh7DG152500
rosa_wichuraiana	Rw2G030980 Rw7G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2250
AccB1I	GGYRCC	1 cut(s)	1900
AccB7I	CCANNNNNTGG	2 cut(s)	273, 766
AciI	CCGC	7 cut(s)	392, 559, 724, 727, 876, 963, 1773
AclI	AACGTT	1 cut(s)	1933
AclWI	GGATC	4 cut(s)	942, 1351, 1532, 1751
AcsI	RAATTY	5 cut(s)	320, 1292, 1544, 1680, 1992
AcuI	CTGAAG	3 cut(s)	1001, 1812, 2024
AcyI	GRCGYC	1 cut(s)	1901
AfaI	GTAC	5 cut(s)	749, 861, 1316, 1451, 2045
AfiI	CCNNNNNNNGG	7 cut(s)	163, 273, 766, 916, 1000, 1521, 1600
AflII	CTTAAG	2 cut(s)	434, 638
AflIII	ACRYGT	1 cut(s)	1311
AgsI	TTSAA	9 cut(s)	569, 667, 809, 1075, 1084, 1127, 1367, 1558, 2103
AjiI	CACGTC	1 cut(s)	1312
AjnI	CCWGG	4 cut(s)	402, 1548, 1729, 2144
AjuI	GAANNNNNNNTTGG	4 cut(s)	146, 178, 485, 517
AleI	CACNNNNGTG	2 cut(s)	855, 1808
Alw21I	GWGCWC	4 cut(s)	216, 689, 1109, 1344
Alw26I	GTCTC	8 cut(s)	122, 621, 781, 1141, 1497, 1613, 1826, 2263
AlwI	GGATC	4 cut(s)	942, 1351, 1532, 1751
AlwNI	CAGNNNCTG	2 cut(s)	255, 1501
Ama87I	CYCGRG	1 cut(s)	2226
AoxI	GGCC	3 cut(s)	190, 1421, 1551
ApeKI	GCWGC	7 cut(s)	255, 616, 619, 634, 1198, 1664, 2238
ApoI	RAATTY	5 cut(s)	320, 1292, 1544, 1680, 1992
ArsI	GACNNNNNNTTYG	2 cut(s)	2012, 2044
Asp700I	GAANNNNTTC	2 cut(s)	473, 1079
AspLEI	GCGC	3 cut(s)	968, 1500, 1903
AspS9I	GGNCC	5 cut(s)	190, 400, 505, 1422, 1964
AsuC2I	CCSGG	1 cut(s)	1241
AsuHPI	GGTGA	3 cut(s)	1079, 1434, 1816
AsuII	TTCGAA	1 cut(s)	1289
AvaI	CYCGRG	1 cut(s)	2226
AvaII	GGWCC	3 cut(s)	400, 505, 1964
AxyI	CCTNAGG	1 cut(s)	1960
BaeGI	GKGCMC	2 cut(s)	774, 1240
BaeI	ACNNNNGTAYC	2 cut(s)	1433, 1466
BanI	GGYRCC	1 cut(s)	1900
BanII	GRGCYC	6 cut(s)	216, 689, 1109, 1344, 2174, 2204
BbsI	GAAGAC	1 cut(s)	518
Bbv12I	GWGCWC	4 cut(s)	216, 689, 1109, 1344
BbvI	GCAGC	7 cut(s)	242, 621, 628, 631, 1210, 1676, 2225
BccI	CCATC	6 cut(s)	46, 59, 306, 549, 1679, 1711
BceAI	ACGGC	1 cut(s)	758
BciT130I	CCWGG	4 cut(s)	404, 1550, 1731, 2146
BciVI	GTATCC	1 cut(s)	2190
BclI	TGATCA	2 cut(s)	1570, 1737
BcnI	CCSGG	1 cut(s)	1241
BcoDI	GTCTC	8 cut(s)	122, 621, 781, 1141, 1497, 1613, 1826, 2263
BfaI	CTAG	2 cut(s)	194, 1250
BfmI	CTRYAG	1 cut(s)	1110
BfoI	RGCGCY	2 cut(s)	1501, 1904
BfrI	CTTAAG	2 cut(s)	434, 638
BfuI	GTATCC	1 cut(s)	2190
BglII	AGATCT	1 cut(s)	978
BlpI	GCTNAGC	1 cut(s)	1254
BmcAI	AGTACT	1 cut(s)	2045
Bme1390I	CCNGG	5 cut(s)	404, 1241, 1550, 1731, 2146
Bme18I	GGWCC	3 cut(s)	400, 505, 1964
BmeT110I	CYCGRG	1 cut(s)	2226
BmgBI	CACGTC	1 cut(s)	1312
BmgT120I	GGNCC	5 cut(s)	190, 400, 505, 1422, 1964
BmiI	GGNNCC	4 cut(s)	507, 1424, 1628, 1902
BmrFI	CCNGG	5 cut(s)	404, 1241, 1550, 1731, 2146
BmrI	ACTGGG	3 cut(s)	849, 989, 1359
BmsI	GCATC	6 cut(s)	253, 402, 1317, 1651, 1849, 2218
BmuI	ACTGGG	3 cut(s)	849, 989, 1359
BpiI	GAAGAC	1 cut(s)	518
BplI	GAGNNNNNCTC	2 cut(s)	2209, 2241
BpmI	CTGGAG	3 cut(s)	402, 1033, 2128
Bpu10I	CCTNAGC	1 cut(s)	705
Bpu1102I	GCTNAGC	1 cut(s)	1254
Bpu14I	TTCGAA	1 cut(s)	1289
BpuEI	CTTGAG	2 cut(s)	560, 1079
BpuMI	CCSGG	1 cut(s)	1241
BsaBI	GATNNNNATC	4 cut(s)	245, 1374, 1569, 1742
BsaHI	GRCGYC	1 cut(s)	1901
BsaJI	CCNNGG	7 cut(s)	1063, 1239, 1381, 1599, 1896, 2174, 2204
BsaWI	WCCGGW	1 cut(s)	1139
BsaXI	ACNNNNNCTCC	2 cut(s)	1569, 1599
Bsc4I	CCNNNNNNNGG	7 cut(s)	163, 273, 766, 916, 1000, 1521, 1600
Bse1I	ACTGG	7 cut(s)	278, 478, 767, 855, 995, 1354, 2118
Bse21I	CCTNAGG	1 cut(s)	1960
Bse3DI	GCAATG	1 cut(s)	1653
Bse8I	GATNNNNATC	4 cut(s)	245, 1374, 1569, 1742
BseBI	CCWGG	4 cut(s)	404, 1550, 1731, 2146
BseDI	CCNNGG	7 cut(s)	1063, 1239, 1381, 1599, 1896, 2174, 2204
BseGI	GGATG	6 cut(s)	268, 291, 412, 1332, 1511, 2209
BseJI	GATNNNNATC	4 cut(s)	245, 1374, 1569, 1742
BseLI	CCNNNNNNNGG	7 cut(s)	163, 273, 766, 916, 1000, 1521, 1600
BseMI	GCAATG	1 cut(s)	1653
BseMII	CTCAG	8 cut(s)	197, 813, 1245, 1493, 1508, 1933, 1974, 2120
BseNI	ACTGG	7 cut(s)	278, 478, 767, 855, 995, 1354, 2118
BseRI	GAGGAG	2 cut(s)	155, 182
BseSI	GKGCMC	2 cut(s)	774, 1240
BseXI	GCAGC	7 cut(s)	242, 621, 628, 631, 1210, 1676, 2225
Bsh1285I	CGRYCG	1 cut(s)	2246
BshFI	GGCC	3 cut(s)	192, 1423, 1553
BshNI	GGYRCC	1 cut(s)	1900
BsiEI	CGRYCG	1 cut(s)	2246
BsiHKAI	GWGCWC	4 cut(s)	216, 689, 1109, 1344
BsiHKCI	CYCGRG	1 cut(s)	2226
BsiSI	CCGG	3 cut(s)	13, 1140, 1241
BslFI	GGGAC	2 cut(s)	491, 1400
BslI	CCNNNNNNNGG	7 cut(s)	163, 273, 766, 916, 1000, 1521, 1600
BsmAI	GTCTC	8 cut(s)	122, 621, 781, 1141, 1497, 1613, 1826, 2263
BsmBI	CGTCTC	1 cut(s)	1497
BsmFI	GGGAC	2 cut(s)	491, 1400
BsmI	GAATGC	1 cut(s)	908
BsnI	GGCC	3 cut(s)	192, 1423, 1553
BsoBI	CYCGRG	1 cut(s)	2226
Bsp119I	TTCGAA	1 cut(s)	1289
Bsp1286I	GDGCHC	8 cut(s)	216, 689, 774, 1109, 1240, 1344, 2174, 2204
Bsp1407I	TGTACA	1 cut(s)	1314
Bsp1720I	GCTNAGC	1 cut(s)	1254
Bsp19I	CCATGG	1 cut(s)	1063
BspACI	CCGC	7 cut(s)	392, 559, 724, 727, 876, 963, 1773
BspANI	GGCC	3 cut(s)	192, 1423, 1553
BspCNI	CTCAG	8 cut(s)	198, 814, 1246, 1494, 1507, 1932, 1973, 2121
BspLI	GGNNCC	4 cut(s)	507, 1424, 1628, 1902
BspPI	GGATC	4 cut(s)	942, 1351, 1532, 1751
BspT104I	TTCGAA	1 cut(s)	1289
BspT107I	GGYRCC	1 cut(s)	1900
BspTI	CTTAAG	2 cut(s)	434, 638
BsrDI	GCAATG	1 cut(s)	1653
BsrGI	TGTACA	1 cut(s)	1314
BsrI	ACTGG	7 cut(s)	278, 478, 767, 855, 995, 1354, 2118
BssECI	CCNNGG	7 cut(s)	1063, 1239, 1381, 1599, 1896, 2174, 2204
BssNI	GRCGYC	1 cut(s)	1901
BssT1I	CCWWGG	4 cut(s)	1063, 1381, 2174, 2204
Bst2UI	CCWGG	4 cut(s)	404, 1550, 1731, 2146
Bst4CI	ACNGT	7 cut(s)	223, 314, 678, 813, 1820, 1828, 2061
Bst6I	CTCTTC	1 cut(s)	416
BstACI	GRCGYC	1 cut(s)	1901
BstAFI	CTTAAG	2 cut(s)	434, 638
BstAPI	GCANNNNNTGC	1 cut(s)	2238
BstAUI	TGTACA	1 cut(s)	1314
BstBI	TTCGAA	1 cut(s)	1289
BstC8I	GCNNGC	2 cut(s)	1478, 1656
BstDEI	CTNAG	9 cut(s)	206, 705, 822, 1254, 1494, 1502, 1919, 1960, 2129
BstDSI	CCRYGG	2 cut(s)	1063, 1599
BstF5I	GGATG	6 cut(s)	268, 291, 412, 1332, 1511, 2209
BstH2I	RGCGCY	2 cut(s)	1501, 1904
BstHHI	GCGC	3 cut(s)	968, 1500, 1903
BstMAI	GTCTC	8 cut(s)	122, 621, 781, 1141, 1497, 1613, 1826, 2263
BstMCI	CGRYCG	1 cut(s)	2246
BstMWI	GCNNNNNNNGC	3 cut(s)	1664, 2029, 2238
BstNI	CCWGG	4 cut(s)	404, 1550, 1731, 2146
BstNSI	RCATGY	1 cut(s)	1658
BstSCI	CCNGG	5 cut(s)	402, 1239, 1548, 1729, 2144
BstSFI	CTRYAG	1 cut(s)	1110
BstSLI	GKGCMC	2 cut(s)	774, 1240
BstV1I	GCAGC	7 cut(s)	242, 621, 628, 631, 1210, 1676, 2225
BstV2I	GAAGAC	1 cut(s)	518
BstX2I	RGATCY	4 cut(s)	934, 978, 1356, 1524
BstYI	RGATCY	4 cut(s)	934, 978, 1356, 1524
Bsu36I	CCTNAGG	1 cut(s)	1960
BsuI	GTATCC	1 cut(s)	2190
BsuRI	GGCC	3 cut(s)	192, 1423, 1553
BtgI	CCRYGG	2 cut(s)	1063, 1599
BtrI	CACGTC	1 cut(s)	1312
BtsCI	GGATG	6 cut(s)	268, 291, 412, 1332, 1511, 2209
BtsI	GCAGTG	1 cut(s)	95
BtsIMutI	CAGTG	8 cut(s)	47, 95, 485, 760, 862, 1002, 1927, 2126
Cac8I	GCNNGC	2 cut(s)	1478, 1656
CaiI	CAGNNNCTG	2 cut(s)	255, 1501
CfoI	GCGC	3 cut(s)	968, 1500, 1903
Cfr13I	GGNCC	5 cut(s)	190, 400, 505, 1422, 1964
Csp6I	GTAC	5 cut(s)	748, 860, 1315, 1450, 2044
CviQI	GTAC	5 cut(s)	748, 860, 1315, 1450, 2044
DdeI	CTNAG	9 cut(s)	206, 705, 822, 1254, 1494, 1502, 1919, 1960, 2129
DinI	GGCGCC	1 cut(s)	1902
DrdI	GACNNNNNNGTC	1 cut(s)	2250
DseDI	GACNNNNNNGTC	1 cut(s)	2250
Eam1104I	CTCTTC	1 cut(s)	416
EarI	CTCTTC	1 cut(s)	416
Ecl136II	GAGCTC	4 cut(s)	214, 687, 1107, 1342
Eco130I	CCWWGG	4 cut(s)	1063, 1381, 2174, 2204
Eco24I	GRGCYC	6 cut(s)	216, 689, 1109, 1344, 2174, 2204
Eco32I	GATATC	2 cut(s)	109, 1009
Eco47I	GGWCC	3 cut(s)	400, 505, 1964
Eco53kI	GAGCTC	4 cut(s)	214, 687, 1107, 1342
Eco57I	CTGAAG	3 cut(s)	1001, 1812, 2024
Eco81I	CCTNAGG	1 cut(s)	1960
Eco88I	CYCGRG	1 cut(s)	2226
EcoICRI	GAGCTC	4 cut(s)	214, 687, 1107, 1342
EcoO109I	RGGNCCY	3 cut(s)	190, 1422, 1964
EcoRII	CCWGG	4 cut(s)	402, 1548, 1729, 2144
EcoRV	GATATC	2 cut(s)	109, 1009
EcoT14I	CCWWGG	4 cut(s)	1063, 1381, 2174, 2204
EcoT38I	GRGCYC	6 cut(s)	216, 689, 1109, 1344, 2174, 2204
EgeI	GGCGCC	1 cut(s)	1902
EheI	GGCGCC	1 cut(s)	1902
ErhI	CCWWGG	4 cut(s)	1063, 1381, 2174, 2204
Esp3I	CGTCTC	1 cut(s)	1497
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	2 cut(s)	491, 1400
FauI	CCCGC	2 cut(s)	385, 869
FbaI	TGATCA	2 cut(s)	1570, 1737
FokI	GGATG	6 cut(s)	275, 278, 419, 1339, 1498, 2196
FriOI	GRGCYC	6 cut(s)	216, 689, 1109, 1344, 2174, 2204
FspBI	CTAG	2 cut(s)	194, 1250
GlaI	GCGC	3 cut(s)	967, 1499, 1902
GsuI	CTGGAG	3 cut(s)	402, 1033, 2128
HaeII	RGCGCY	2 cut(s)	1501, 1904
HaeIII	GGCC	3 cut(s)	192, 1423, 1553
HapII	CCGG	3 cut(s)	13, 1140, 1241
HhaI	GCGC	3 cut(s)	968, 1500, 1903
Hin1I	GRCGYC	1 cut(s)	1901
Hin6I	GCGC	3 cut(s)	966, 1498, 1901
HinP1I	GCGC	3 cut(s)	966, 1498, 1901
HinfI	GANTC	7 cut(s)	832, 1370, 1396, 1726, 1757, 2224, 2264
HpaII	CCGG	3 cut(s)	13, 1140, 1241
HphI	GGTGA	3 cut(s)	1079, 1434, 1816
Hpy166II	GTNNAC	3 cut(s)	860, 1315, 2123
Hpy8I	GTNNAC	3 cut(s)	860, 1315, 2123
Hpy99I	CGWCG	2 cut(s)	2032, 2065
HpyAV	CCTTC	9 cut(s)	37, 181, 892, 946, 966, 1109, 1449, 1605, 1977
HpyCH4III	ACNGT	7 cut(s)	223, 314, 678, 813, 1820, 1828, 2061
HpyCH4IV	ACGT	2 cut(s)	1311, 1933
HpyCH4V	TGCA	8 cut(s)	258, 415, 522, 865, 1025, 1521, 1664, 1925
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1664, 2029, 2238
HpyF3I	CTNAG	9 cut(s)	206, 705, 822, 1254, 1494, 1502, 1919, 1960, 2129
HpySE526I	ACGT	2 cut(s)	1311, 1933
Hsp92I	GRCGYC	1 cut(s)	1901
HspAI	GCGC	3 cut(s)	966, 1498, 1901
KasI	GGCGCC	1 cut(s)	1900
Ksp22I	TGATCA	2 cut(s)	1570, 1737
LmnI	GCTCC	4 cut(s)	211, 701, 1104, 2147
Lsp1109I	GCAGC	7 cut(s)	242, 621, 628, 631, 1210, 1676, 2225
LweI	GCATC	6 cut(s)	253, 402, 1317, 1651, 1849, 2218
MaeI	CTAG	2 cut(s)	194, 1250
MaeII	ACGT	2 cut(s)	1311, 1933
MaeIII	GTNAC	4 cut(s)	1067, 1397, 1828, 1866
MfeI	CAATTG	1 cut(s)	132
MflI	RGATCY	4 cut(s)	934, 978, 1356, 1524
MhlI	GDGCHC	8 cut(s)	216, 689, 774, 1109, 1240, 1344, 2174, 2204
Mly113I	GGCGCC	1 cut(s)	1901
MlyI	GAGTC	4 cut(s)	826, 1405, 1720, 2218
MmeI	TCCRAC	2 cut(s)	510, 2036
MroXI	GAANNNNTTC	2 cut(s)	473, 1079
MseI	TTAA	5 cut(s)	435, 639, 720, 1463, 1785
MslI	CAYNNNNRTG	4 cut(s)	855, 1659, 1808, 2159
MspCI	CTTAAG	2 cut(s)	434, 638
MspI	CCGG	3 cut(s)	13, 1140, 1241
MspR9I	CCNGG	5 cut(s)	404, 1241, 1550, 1731, 2146
MunI	CAATTG	1 cut(s)	132
Mva1269I	GAATGC	1 cut(s)	908
MvaI	CCWGG	4 cut(s)	404, 1550, 1731, 2146
MwoI	GCNNNNNNNGC	3 cut(s)	1664, 2029, 2238
NarI	GGCGCC	1 cut(s)	1901
NciI	CCSGG	1 cut(s)	1241
NcoI	CCATGG	1 cut(s)	1063
NlaIV	GGNNCC	4 cut(s)	507, 1424, 1628, 1902
NmeAIII	GCCGAG	1 cut(s)	332
NmuCI	GTSAC	3 cut(s)	1067, 1397, 1866
NspI	RCATGY	1 cut(s)	1658
NspV	TTCGAA	1 cut(s)	1289
OliI	CACNNNNGTG	2 cut(s)	855, 1808
PaeI	GCATGC	1 cut(s)	1658
PaeR7I	CTCGAG	1 cut(s)	2226
PctI	GAATGC	1 cut(s)	908
PdmI	GAANNNNTTC	2 cut(s)	473, 1079
PfeI	GAWTC	3 cut(s)	1370, 1757, 2264
PflFI	GACNNNGTC	1 cut(s)	314
PflMI	CCANNNNNTGG	2 cut(s)	273, 766
PfoI	TCCNGGA	1 cut(s)	2144
PleI	GAGTC	4 cut(s)	826, 1404, 1720, 2218
PluTI	GGCGCC	1 cut(s)	1904
PpsI	GAGTC	4 cut(s)	826, 1404, 1720, 2218
PpuMI	RGGWCCY	1 cut(s)	1964
Psp124BI	GAGCTC	4 cut(s)	216, 689, 1109, 1344
Psp1406I	AACGTT	1 cut(s)	1933
Psp5II	RGGWCCY	1 cut(s)	1964
Psp6I	CCWGG	4 cut(s)	402, 1548, 1729, 2144
PspGI	CCWGG	4 cut(s)	402, 1548, 1729, 2144
PspN4I	GGNNCC	4 cut(s)	507, 1424, 1628, 1902
PspPI	GGNCC	5 cut(s)	190, 400, 505, 1422, 1964
PspPPI	RGGWCCY	1 cut(s)	1964
PspXI	VCTCGAGB	1 cut(s)	2226
PstNI	CAGNNNCTG	2 cut(s)	255, 1501
PsuI	RGATCY	4 cut(s)	934, 978, 1356, 1524
PsyI	GACNNNGTC	1 cut(s)	314
RsaI	GTAC	5 cut(s)	749, 861, 1316, 1451, 2045
RsaNI	GTAC	5 cut(s)	748, 860, 1315, 1450, 2044
RseI	CAYNNNNRTG	4 cut(s)	855, 1659, 1808, 2159
SacI	GAGCTC	4 cut(s)	216, 689, 1109, 1344
SaqAI	TTAA	5 cut(s)	435, 639, 720, 1463, 1785
Sau96I	GGNCC	5 cut(s)	190, 400, 505, 1422, 1964
ScaI	AGTACT	1 cut(s)	2045
SchI	GAGTC	4 cut(s)	826, 1405, 1720, 2218
ScrFI	CCNGG	5 cut(s)	404, 1241, 1550, 1731, 2146
SduI	GDGCHC	8 cut(s)	216, 689, 774, 1109, 1240, 1344, 2174, 2204
SfaNI	GCATC	6 cut(s)	253, 402, 1317, 1651, 1849, 2218
SfcI	CTRYAG	1 cut(s)	1110
SfoI	GGCGCC	1 cut(s)	1902
Sfr274I	CTCGAG	1 cut(s)	2226
SfuI	TTCGAA	1 cut(s)	1289
SinI	GGWCC	3 cut(s)	400, 505, 1964
SlaI	CTCGAG	1 cut(s)	2226
SmiMI	CAYNNNNRTG	4 cut(s)	855, 1659, 1808, 2159
SmlI	CTYRAG	5 cut(s)	434, 575, 638, 1094, 2226
SmoI	CTYRAG	5 cut(s)	434, 575, 638, 1094, 2226
SphI	GCATGC	1 cut(s)	1658
SsiI	CCGC	7 cut(s)	392, 559, 724, 727, 876, 963, 1773
SspDI	GGCGCC	1 cut(s)	1900
SspMI	CTAG	2 cut(s)	194, 1250
SstI	GAGCTC	4 cut(s)	216, 689, 1109, 1344
StyD4I	CCNGG	5 cut(s)	402, 1239, 1548, 1729, 2144
StyI	CCWWGG	4 cut(s)	1063, 1381, 2174, 2204
TaaI	ACNGT	7 cut(s)	223, 314, 678, 813, 1820, 1828, 2061
TaiI	ACGT	2 cut(s)	1314, 1936
TaqI	TCGA	8 cut(s)	318, 372, 830, 1218, 1289, 1778, 2063, 2227
TaqII	GACCGA	1 cut(s)	2260
TatI	WGTACW	4 cut(s)	747, 859, 1314, 2043
TauI	GCSGC	3 cut(s)	562, 727, 966
TfiI	GAWTC	3 cut(s)	1370, 1757, 2264
Tru1I	TTAA	5 cut(s)	435, 639, 720, 1463, 1785
Tru9I	TTAA	5 cut(s)	435, 639, 720, 1463, 1785
TscAI	CASTG	8 cut(s)	54, 95, 485, 767, 862, 1002, 1927, 2133
TseFI	GTSAC	3 cut(s)	1067, 1397, 1866
TseI	GCWGC	7 cut(s)	255, 616, 619, 634, 1198, 1664, 2238
Tsp45I	GTSAC	3 cut(s)	1067, 1397, 1866
TspDTI	ATGAA	7 cut(s)	56, 213, 903, 965, 1227, 1922, 2076
TspGWI	ACGGA	1 cut(s)	1616
TspRI	CASTG	8 cut(s)	54, 95, 485, 767, 862, 1002, 1927, 2133
Tth111I	GACNNNGTC	1 cut(s)	314
Van91I	CCANNNNNTGG	2 cut(s)	273, 766
Vha464I	CTTAAG	2 cut(s)	434, 638
VpaK11BI	GGWCC	3 cut(s)	400, 505, 1964
XapI	RAATTY	5 cut(s)	320, 1292, 1544, 1680, 1992
XceI	RCATGY	1 cut(s)	1658
XcmI	CCANNNNNNNNNTGG	1 cut(s)	485
XhoI	CTCGAG	1 cut(s)	2226
XmnI	GAANNNNTTC	2 cut(s)	473, 1079
XspI	CTAG	2 cut(s)	194, 1250
ZrmI	AGTACT	1 cut(s)	2045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.