Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010222

Physical Location & Seq

Genomic Coordinates Reverse (-)

19942489 .. 19947300

Gene Structure 4812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18112

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCAGACACAAGACCTTTGCTTCTGTCTGACCCCGATGCCCTTCCCACCGCCTACACTCCTCTCCCAGGGGGATCCTCCTCTCCGGAGATCCGCCGGATACACGTGAAGGAGGTTCTGGCGATGTTCGCCGGAGTGGTGATGGTTTCTTTGTTGGTGGTCATTATAGGGAATACAGGTCAGGATGGAAATGTGTACCATAGGCACAATAGGAGGGATAAGCCAATGTTATTGGCTGCTTCACCGACCAAGGAAACTGCCACCAAGGCAGAGAAGGCAGAGAAGTTGCAGGCGGTGACACGTGGCATGGCGGCCGGAGTGTCGGAGAAATCGAGCCGGTTGTACAGCAGCGATGTTGGTGCGGGCACGCCGGTGTATCCGTGGAACAATAGCATGTTGTCGTGGCAGAGGACTGCTTTCCATTTTCAGCCGGAGAAGAATTGGATGAATGATCCCAACGGTCCATTATTCTACAAGGGTTGGTACCATTTTTTCTACCAGTACAATCCCAAAGGTGCAGTATGGGGAAACATAGTATGGGGTCATGCAGTATCCAGAGACTTGATCCATTGGCTTCACCTTCCTCTAGCAATGGTAGCTGATCAATGGTATGACATCAATGGAGTCTGGACTGGCTCGGCTACAATTCTCCCAAATGACCAAATTGTCATGCTCTACACTGGTTCAACCAATGAGTCAGTCCAGGTCCAATGTCTTGCATACCCTGCTGACCACAAAGACCCTCTCCTCACCAAGTGGGTCAAGTATTCCGGAAACCCGGTTCTAGTCCCCCCTCCCGGGACCGGAGTCAAGGACTTCCGGGACCCGACCACTGCTTGGTACACTACTGATGGGAAATGGAGGATTACAATTGGGTCCAAGGTTAACAAAACTGGTATATCTTTGGTTTATGACACCAAGGACTTTATTACGTATGAGCAACTAGATGGTGTGCTTCATGCTGTGCCTGGGACTGGAATGTGGGAATGTATCGATTTTTATCCTGTGTCGAAAACTAGTGACAAGGGGTTGGACACTTCTCAGAATGGGGCTGATGTGAAGCATGTGATGAAGGCTAGTCTTGATGATGATAGGAATGATTACTATGCATTGGGGTCTTATAATGAGAAGACTGGAAAATGGGTTCCTGATAATCAAAAGATTGATGTTGGGATTGGGATTAGGTATGATTATGGGAAGTTCTATGCTTCCAAGACCTTCTATGATCAGAACAAGCAGAGAAGGGTGTTGTGGGGTTGGATTGGAGAGTCCGATAGTGAGAATGCTGATGTCAAGAAGGGTTGGGCATCTCTTCAGGGAATTCCAAGAACAGTGTTGTTTGATCAAAAGACTGGTAGCAATCTACTTCAATGGCCAGTGGAGGAGATTGAGAAATTGAGATTGAACAAGAAGAACTTCGACAAGGTACAAGTCAAGGCAGGGTCAGTGGTGCCACTTGACGTTGGCACAGCTACACAGTTGGACATTGTCGTGGAGTTTGAGTTGGATCAGAAGGTTGTAGAGAGCGCAGCTGAATCCAACGAGGAGTTCAGTTGCCAAACTAGTGGTGGAGCTGCCAAACGCGGCGCATTGGGACCCTTTGGTCTTCTTGTTCTTGCAGATGACAGCCTCTCTGAGCGCACTCCTGTCTACTTTTATGTTGTCAAAGGATCTGGTGGCACTGTCAATACCTACTTCTGTGCTGATCAAACAAGGTCTTCTGTGGCAACTGATGTTGTTAAACAAGTTAGTGGTAGCTATGTTCCAGTACTGAAAGGTGAAACGCTATCTCTGAGAATACTGGTTGATCATTCAATAATTGAAAGCTTTGCTCAAGGTGGACGAACAACGATAACAACGCGCGTTTACCCAACTCAGGCAATTTATGGAGCTGCAAGGCTCTTTTTGTTCAACAATGCTACTGACACCAGTTTTACTGCCTCACTCCAGATATGGCAGATGAACTCTGCATTCATACGTCCATTCTCACCTGATGCAGCGAGTCATGCAAGCTTCACCCCTGTTACAGTATTTATCAAATTCATCGTCCCATTTGGGATTTTTTTAACTTTATATTTTGTAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0016787 GO:0016798 GO:0022622 GO:0030312 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071944 GO:0080022 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

DUF3357 Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

695

Amino Acids

77.16

Weight (kDa)

6.9

Isoelectric Point (pI)

32.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
INV_N	PF11837	19 - 133	6.3e-17	Beta-fructofuranosidase, N-terminal domain
Glyco_hydro_32N	PF00251	141 - 459	1.3e-105	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	462 - 653	2.2e-25	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12240 AT1G62660 AT1G62660 AT1G62660 AT1G62660
fragaria_vesca	FvH4_5g00290 FvH4_5g00290 FvH4_5g00290
malus_domestica	MD06G1066600.v1.1
prunus_persica	Prupe.5G075600_v2.0.a1 Prupe.5G075600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0202311
rosa_laevigata	RLG00000003612
rosa_multiflora	Rmu_sc0010249.1_g000001
rosa_roxburghii	Rroxscaffold_3G00254670
rosa_rugosa	Rorug07G0069800
rosa_samantha	Rh7AG196900 Rh7BG198200 Rh7CG208100 Rh7DG203600
rosa_wichuraiana	Rw7G017260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1122
AasI	GACNNNNNNGTC	2 cut(s)	665, 1602
Acc65I	GGTACC	1 cut(s)	483
AccB1I	GGYRCC	2 cut(s)	483, 1450
AccB7I	CCANNNNNTGG	1 cut(s)	837
AccI	GTMKAC	1 cut(s)	1650
AccII	CGCG	3 cut(s)	1584, 1861, 1863
AccIII	TCCGGA	2 cut(s)	85, 770
AciI	CCGC	6 cut(s)	51, 94, 293, 311, 362, 1584
AclWI	GGATC	7 cut(s)	69, 82, 85, 446, 559, 1515, 1678
AcoI	YGGCCR	2 cut(s)	312, 1373
AcsI	RAATTY	2 cut(s)	1320, 2039
AcuI	CTGAAG	1 cut(s)	1298
AcvI	CACGTG	2 cut(s)	106, 302
AdeI	CACNNNGTG	1 cut(s)	756
AfaI	GTAC	7 cut(s)	197, 344, 485, 503, 842, 1428, 1770
AfiI	CCNNNNNNNGG	7 cut(s)	68, 797, 798, 803, 837, 974, 1876
AflIII	ACRYGT	2 cut(s)	103, 299
AgsI	TTSAA	6 cut(s)	687, 1370, 1405, 1815, 1823, 1912
AhlI	ACTAGT	2 cut(s)	1016, 1562
AjnI	CCWGG	3 cut(s)	67, 702, 967
AjuI	GAANNNNNNNTTGG	2 cut(s)	1532, 1564
AleI	CACNNNNGTG	1 cut(s)	371
AloI	GAACNNNNNNTCC	4 cut(s)	765, 797, 1128, 1160
AluBI	AGCT	8 cut(s)	599, 1472, 1532, 1574, 1758, 1827, 1892, 2013
AluI	AGCT	8 cut(s)	599, 1472, 1532, 1574, 1758, 1827, 1892, 2013
Alw26I	GTCTC	1 cut(s)	552
AlwI	GGATC	7 cut(s)	69, 82, 85, 446, 559, 1515, 1678
Ama87I	CYCGRG	1 cut(s)	797
Aor13HI	TCCGGA	2 cut(s)	85, 770
AoxI	GGCC	2 cut(s)	312, 1373
ApeKI	GCWGC	6 cut(s)	236, 348, 1529, 1574, 1892, 1997
ApoI	RAATTY	2 cut(s)	1320, 2039
ArsI	GACNNNNNNTTYG	2 cut(s)	2031, 2063
Asp700I	GAANNNNTTC	1 cut(s)	1415
Asp718I	GGTACC	1 cut(s)	483
AspLEI	GCGC	4 cut(s)	1529, 1589, 1641, 1863
AspS9I	GGNCC	6 cut(s)	461, 706, 801, 823, 876, 1595
AsuC2I	CCSGG	4 cut(s)	779, 798, 799, 821
AsuHPI	GGTGA	8 cut(s)	151, 234, 307, 569, 742, 1790, 1980, 2008
AvaI	CYCGRG	1 cut(s)	797
AvaII	GGWCC	6 cut(s)	461, 706, 801, 823, 876, 1595
BaeGI	GKGCMC	1 cut(s)	368
BalI	TGGCCA	1 cut(s)	1375
BamHI	GGATCC	1 cut(s)	74
BanI	GGYRCC	2 cut(s)	483, 1450
BbrPI	CACGTG	2 cut(s)	106, 302
BbsI	GAAGAC	3 cut(s)	1136, 1598, 1710
BbvI	GCAGC	6 cut(s)	223, 360, 1541, 1561, 1879, 2009
BccI	CCATC	4 cut(s)	136, 179, 845, 941
BcgI	CGANNNNNNTGC	2 cut(s)	341, 375
BciT130I	CCWGG	3 cut(s)	69, 704, 969
BciVI	GTATCC	3 cut(s)	93, 387, 562
BclI	TGATCA	5 cut(s)	601, 1225, 1342, 1705, 1807
BcnI	CCSGG	4 cut(s)	779, 798, 799, 821
BcoDI	GTCTC	1 cut(s)	552
BcuI	ACTAGT	2 cut(s)	1016, 1562
BfaI	CTAG	6 cut(s)	587, 785, 944, 1017, 1077, 1563
BfuI	GTATCC	3 cut(s)	93, 387, 562
BglI	GCCNNNNNGGC	1 cut(s)	266
BisI	GCNGC	8 cut(s)	237, 312, 349, 1530, 1575, 1585, 1893, 1998
BlsI	GCNGC	8 cut(s)	238, 313, 350, 1531, 1576, 1586, 1894, 1999
BmcAI	AGTACT	1 cut(s)	1770
Bme1390I	CCNGG	7 cut(s)	69, 704, 779, 798, 799, 821, 969
Bme18I	GGWCC	6 cut(s)	461, 706, 801, 823, 876, 1595
BmeT110I	CYCGRG	1 cut(s)	797
BmgT120I	GGNCC	6 cut(s)	461, 706, 801, 823, 876, 1595
BmrFI	CCNGG	7 cut(s)	69, 704, 779, 798, 799, 821, 969
BmsI	GCATC	3 cut(s)	28, 1316, 1984
BoxI	GACNNNNGTC	1 cut(s)	806
BpiI	GAAGAC	3 cut(s)	1136, 1598, 1710
BpmI	CTGGAG	1 cut(s)	1931
BpuEI	CTTGAG	1 cut(s)	1818
BpuMI	CCSGG	4 cut(s)	779, 798, 799, 821
Bsa29I	ATCGAT	1 cut(s)	993
BsaAI	YACGTR	3 cut(s)	106, 302, 933
BsaBI	GATNNNNATC	1 cut(s)	999
BsaJI	CCNNGG	9 cut(s)	67, 68, 249, 264, 380, 797, 879, 918, 968
BsaWI	WCCGGW	3 cut(s)	85, 770, 803
BsaXI	ACNNNNNCTCC	2 cut(s)	1487, 1517
Bsc4I	CCNNNNNNNGG	7 cut(s)	68, 797, 798, 803, 837, 974, 1876
Bse118I	RCCGGY	2 cut(s)	336, 370
Bse3DI	GCAATG	1 cut(s)	597
Bse8I	GATNNNNATC	1 cut(s)	999
BseAI	TCCGGA	2 cut(s)	85, 770
BseBI	CCWGG	3 cut(s)	69, 704, 969
BseCI	ATCGAT	1 cut(s)	993
BseDI	CCNNGG	9 cut(s)	67, 68, 249, 264, 380, 797, 879, 918, 968
BseGI	GGATG	2 cut(s)	190, 450
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	7 cut(s)	68, 797, 798, 803, 837, 974, 1876
BseMI	GCAATG	1 cut(s)	597
BseMII	CTCAG	4 cut(s)	1055, 1626, 1784, 1889
BseRI	GAGGAG	5 cut(s)	51, 70, 737, 1397, 1559
BseSI	GKGCMC	1 cut(s)	368
BseX3I	CGGCCG	1 cut(s)	312
BseXI	GCAGC	6 cut(s)	223, 360, 1541, 1561, 1879, 2009
BsgI	GTGCAG	1 cut(s)	537
Bsh1236I	CGCG	3 cut(s)	1584, 1861, 1863
Bsh1285I	CGRYCG	1 cut(s)	315
BshFI	GGCC	2 cut(s)	314, 1375
BshNI	GGYRCC	2 cut(s)	483, 1450
BshVI	ATCGAT	1 cut(s)	993
BsiEI	CGRYCG	1 cut(s)	315
BsiHKCI	CYCGRG	1 cut(s)	797
BslFI	GGGAC	6 cut(s)	773, 814, 836, 985, 1608, 2033
BslI	CCNNNNNNNGG	7 cut(s)	68, 797, 798, 803, 837, 974, 1876
BsmAI	GTCTC	1 cut(s)	552
BsmFI	GGGAC	6 cut(s)	773, 814, 836, 985, 1608, 2033
BsmI	GAATGC	2 cut(s)	1288, 1970
BsnI	GGCC	2 cut(s)	314, 1375
BsoBI	CYCGRG	1 cut(s)	797
Bsp1286I	GDGCHC	1 cut(s)	368
Bsp13I	TCCGGA	2 cut(s)	85, 770
Bsp1407I	TGTACA	1 cut(s)	342
BspACI	CCGC	6 cut(s)	51, 94, 293, 311, 362, 1584
BspANI	GGCC	2 cut(s)	314, 1375
BspCNI	CTCAG	4 cut(s)	1054, 1627, 1785, 1888
BspDI	ATCGAT	1 cut(s)	993
BspEI	TCCGGA	2 cut(s)	85, 770
BspFNI	CGCG	3 cut(s)	1584, 1861, 1863
BspPI	GGATC	7 cut(s)	69, 82, 85, 446, 559, 1515, 1678
BspT107I	GGYRCC	2 cut(s)	483, 1450
BsrDI	GCAATG	1 cut(s)	597
BsrFI	RCCGGY	2 cut(s)	336, 370
BsrGI	TGTACA	1 cut(s)	342
BssAI	RCCGGY	2 cut(s)	336, 370
BssECI	CCNNGG	9 cut(s)	67, 68, 249, 264, 380, 797, 879, 918, 968
BssT1I	CCWWGG	4 cut(s)	249, 264, 879, 918
Bst2UI	CCWGG	3 cut(s)	69, 704, 969
Bst4CI	ACNGT	5 cut(s)	461, 1333, 1479, 1684, 2029
Bst6I	CTCTTC	1 cut(s)	1317
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstAUI	TGTACA	1 cut(s)	342
BstBAI	YACGTR	3 cut(s)	106, 302, 933
BstC8I	GCNNGC	4 cut(s)	291, 364, 368, 2011
BstDEI	CTNAG	4 cut(s)	1041, 1635, 1793, 1875
BstDSI	CCRYGG	1 cut(s)	380
BstENI	CCTNNNNNAGG	1 cut(s)	66
BstF5I	GGATG	2 cut(s)	190, 450
BstFNI	CGCG	3 cut(s)	1584, 1861, 1863
BstHHI	GCGC	4 cut(s)	1529, 1589, 1641, 1863
BstMAI	GTCTC	1 cut(s)	552
BstMCI	CGRYCG	1 cut(s)	315
BstMWI	GCNNNNNNNGC	6 cut(s)	128, 266, 275, 596, 725, 2006
BstNI	CCWGG	3 cut(s)	69, 704, 969
BstNSI	RCATGY	2 cut(s)	397, 1067
BstPAI	GACNNNNGTC	1 cut(s)	806
BstSCI	CCNGG	7 cut(s)	67, 702, 777, 796, 797, 819, 967
BstSLI	GKGCMC	1 cut(s)	368
BstSNI	TACGTA	1 cut(s)	933
BstUI	CGCG	3 cut(s)	1584, 1861, 1863
BstV1I	GCAGC	6 cut(s)	223, 360, 1541, 1561, 1879, 2009
BstV2I	GAAGAC	3 cut(s)	1136, 1598, 1710
BstX2I	RGATCY	3 cut(s)	74, 90, 1670
BstXI	CCANNNNNNTGG	1 cut(s)	1565
BstYI	RGATCY	3 cut(s)	74, 90, 1670
BstZI	CGGCCG	1 cut(s)	312
Bsu15I	ATCGAT	1 cut(s)	993
BsuI	GTATCC	3 cut(s)	93, 387, 562
BsuRI	GGCC	2 cut(s)	314, 1375
BsuTUI	ATCGAT	1 cut(s)	993
BtgI	CCRYGG	1 cut(s)	380
BtgZI	GCGATG	2 cut(s)	137, 366
BtsCI	GGATG	2 cut(s)	190, 450
BtsI	GCAGTG	1 cut(s)	831
BtsIMutI	CAGTG	6 cut(s)	678, 831, 1338, 1383, 1452, 1680
Cac8I	GCNNGC	4 cut(s)	291, 364, 368, 2011
CfoI	GCGC	4 cut(s)	1529, 1589, 1641, 1863
Cfr10I	RCCGGY	2 cut(s)	336, 370
Cfr13I	GGNCC	6 cut(s)	461, 706, 801, 823, 876, 1595
Cfr9I	CCCGGG	1 cut(s)	797
ClaI	ATCGAT	1 cut(s)	993
Csp6I	GTAC	7 cut(s)	196, 343, 484, 502, 841, 1427, 1769
CviAII	CATG	7 cut(s)	307, 394, 545, 670, 959, 1064, 2006
CviQI	GTAC	7 cut(s)	196, 343, 484, 502, 841, 1427, 1769
DdeI	CTNAG	4 cut(s)	1041, 1635, 1793, 1875
DraIII	CACNNNGTG	1 cut(s)	756
DrdI	GACNNNNNNGTC	2 cut(s)	665, 1602
DseDI	GACNNNNNNGTC	2 cut(s)	665, 1602
EaeI	YGGCCR	2 cut(s)	312, 1373
EagI	CGGCCG	1 cut(s)	312
Eam1104I	CTCTTC	1 cut(s)	1317
EarI	CTCTTC	1 cut(s)	1317
EciI	GGCGGA	1 cut(s)	83
EclXI	CGGCCG	1 cut(s)	312
Eco105I	TACGTA	1 cut(s)	933
Eco130I	CCWWGG	4 cut(s)	249, 264, 879, 918
Eco47I	GGWCC	6 cut(s)	461, 706, 801, 823, 876, 1595
Eco52I	CGGCCG	1 cut(s)	312
Eco57I	CTGAAG	1 cut(s)	1298
Eco72I	CACGTG	2 cut(s)	106, 302
Eco88I	CYCGRG	1 cut(s)	797
EcoNI	CCTNNNNNAGG	1 cut(s)	66
EcoO109I	RGGNCCY	2 cut(s)	823, 1595
EcoRI	GAATTC	1 cut(s)	1320
EcoRII	CCWGG	3 cut(s)	67, 702, 967
EcoT14I	CCWWGG	4 cut(s)	249, 264, 879, 918
EcoT22I	ATGCAT	1 cut(s)	1111
ErhI	CCWWGG	4 cut(s)	249, 264, 879, 918
FaeI	CATG	7 cut(s)	310, 397, 548, 673, 962, 1067, 2009
FalI	AAGNNNNNCTT	2 cut(s)	1400, 1432
FaqI	GGGAC	6 cut(s)	773, 814, 836, 985, 1608, 2033
FatI	CATG	7 cut(s)	306, 393, 544, 669, 958, 1063, 2005
FauI	CCCGC	1 cut(s)	355
FbaI	TGATCA	5 cut(s)	601, 1225, 1342, 1705, 1807
FblI	GTMKAC	1 cut(s)	1650
Fnu4HI	GCNGC	8 cut(s)	237, 312, 349, 1530, 1575, 1585, 1893, 1998
FokI	GGATG	2 cut(s)	197, 457
Fsp4HI	GCNGC	8 cut(s)	237, 312, 349, 1530, 1575, 1585, 1893, 1998
FspBI	CTAG	6 cut(s)	587, 785, 944, 1017, 1077, 1563
GlaI	GCGC	4 cut(s)	1528, 1588, 1640, 1862
GluI	GCNGC	8 cut(s)	237, 312, 349, 1530, 1575, 1585, 1893, 1998
GsuI	CTGGAG	1 cut(s)	1931
HaeIII	GGCC	2 cut(s)	314, 1375
HhaI	GCGC	4 cut(s)	1529, 1589, 1641, 1863
Hin1II	CATG	7 cut(s)	310, 397, 548, 673, 962, 1067, 2009
Hin6I	GCGC	4 cut(s)	1527, 1587, 1639, 1861
HinP1I	GCGC	4 cut(s)	1527, 1587, 1639, 1861
HincII	GTYRAC	1 cut(s)	886
HindII	GTYRAC	1 cut(s)	886
HindIII	AAGCTT	2 cut(s)	1825, 2011
HinfI	GANTC	6 cut(s)	624, 695, 807, 1268, 1535, 2002
HpaI	GTTAAC	1 cut(s)	886
HphI	GGTGA	8 cut(s)	151, 234, 307, 569, 742, 1790, 1980, 2008
Hpy166II	GTNNAC	6 cut(s)	196, 843, 886, 1651, 1841, 1867
Hpy188I	TCNGA	8 cut(s)	31, 325, 1044, 1230, 1273, 1512, 1636, 1794
Hpy188III	TCNNGA	9 cut(s)	86, 182, 555, 628, 771, 1082, 1148, 1294, 1948
Hpy8I	GTNNAC	6 cut(s)	196, 843, 886, 1651, 1841, 1867
HpyAV	CCTTC	9 cut(s)	53, 103, 268, 590, 1066, 1228, 1236, 1291, 1507
HpyCH4III	ACNGT	5 cut(s)	461, 1333, 1479, 1684, 2029
HpyCH4IV	ACGT	5 cut(s)	105, 301, 932, 1461, 1978
HpyF10VI	GCNNNNNNNGC	6 cut(s)	128, 266, 275, 596, 725, 2006
HpyF3I	CTNAG	4 cut(s)	1041, 1635, 1793, 1875
HpySE526I	ACGT	5 cut(s)	105, 301, 932, 1461, 1978
Hsp92II	CATG	7 cut(s)	310, 397, 548, 673, 962, 1067, 2009
HspAI	GCGC	4 cut(s)	1527, 1587, 1639, 1861
KflI	GGGWCCC	2 cut(s)	823, 1595
Kpn2I	TCCGGA	2 cut(s)	85, 770
KpnI	GGTACC	1 cut(s)	487
Ksp22I	TGATCA	5 cut(s)	601, 1225, 1342, 1705, 1807
KspAI	GTTAAC	1 cut(s)	886
LmnI	GCTCC	2 cut(s)	1571, 1889
Lsp1109I	GCAGC	6 cut(s)	223, 360, 1541, 1561, 1879, 2009
LweI	GCATC	3 cut(s)	28, 1316, 1984
MaeI	CTAG	6 cut(s)	587, 785, 944, 1017, 1077, 1563
MaeII	ACGT	5 cut(s)	105, 301, 932, 1461, 1978
MaeIII	GTNAC	3 cut(s)	295, 1019, 2023
MboII	GAAGA	6 cut(s)	448, 1141, 1304, 1423, 1598, 1710
MfeI	CAATTG	1 cut(s)	870
MflI	RGATCY	3 cut(s)	74, 90, 1670
MhlI	GDGCHC	1 cut(s)	368
MlsI	TGGCCA	1 cut(s)	1375
MluCI	AATT	9 cut(s)	439, 645, 663, 870, 1320, 1394, 1818, 1881, 2039
MluNI	TGGCCA	1 cut(s)	1375
MlyI	GAGTC	5 cut(s)	633, 704, 816, 1277, 2011
MmeI	TCCRAC	6 cut(s)	303, 1011, 1238, 1461, 1485, 1563
Mox20I	TGGCCA	1 cut(s)	1375
Mph1103I	ATGCAT	1 cut(s)	1111
MroI	TCCGGA	2 cut(s)	85, 770
MroXI	GAANNNNTTC	1 cut(s)	1415
MscI	TGGCCA	1 cut(s)	1375
MseI	TTAA	3 cut(s)	885, 1740, 2066
MslI	CAYNNNNRTG	2 cut(s)	371, 1490
Msp20I	TGGCCA	1 cut(s)	1375
MspA1I	CMGCKG	1 cut(s)	1532
MspR9I	CCNGG	7 cut(s)	69, 704, 779, 798, 799, 821, 969
MunI	CAATTG	1 cut(s)	870
Mva1269I	GAATGC	2 cut(s)	1288, 1970
MvaI	CCWGG	3 cut(s)	69, 704, 969
MvnI	CGCG	3 cut(s)	1584, 1861, 1863
MwoI	GCNNNNNNNGC	6 cut(s)	128, 266, 275, 596, 725, 2006
NciI	CCSGG	4 cut(s)	779, 798, 799, 821
NlaIII	CATG	7 cut(s)	310, 397, 548, 673, 962, 1067, 2009
NmeAIII	GCCGAG	1 cut(s)	617
NmuCI	GTSAC	2 cut(s)	295, 1019
NsiI	ATGCAT	1 cut(s)	1111
NspI	RCATGY	2 cut(s)	397, 1067
OliI	CACNNNNGTG	1 cut(s)	371
PasI	CCCWGGG	1 cut(s)	68
PcsI	WCGNNNNNNNCGW	1 cut(s)	329
PctI	GAATGC	2 cut(s)	1288, 1970
PdmI	GAANNNNTTC	1 cut(s)	1415
PfeI	GAWTC	1 cut(s)	1535
PflFI	GACNNNGTC	1 cut(s)	1487
PflMI	CCANNNNNTGG	1 cut(s)	837
PfoI	TCCNGGA	1 cut(s)	819
PkrI	GCNGC	8 cut(s)	238, 313, 350, 1531, 1576, 1586, 1894, 1999
PleI	GAGTC	5 cut(s)	632, 703, 815, 1276, 2010
PmaCI	CACGTG	2 cut(s)	106, 302
PmlI	CACGTG	2 cut(s)	106, 302
PpsI	GAGTC	5 cut(s)	632, 703, 815, 1276, 2010
Ppu21I	YACGTR	3 cut(s)	106, 302, 933
PpuMI	RGGWCCY	2 cut(s)	823, 1595
PshAI	GACNNNNGTC	1 cut(s)	806
PsiI	TTATAA	1 cut(s)	1122
Psp5II	RGGWCCY	2 cut(s)	823, 1595
Psp6I	CCWGG	3 cut(s)	67, 702, 967
PspCI	CACGTG	2 cut(s)	106, 302
PspGI	CCWGG	3 cut(s)	67, 702, 967
PspPI	GGNCC	6 cut(s)	461, 706, 801, 823, 876, 1595
PspPPI	RGGWCCY	2 cut(s)	823, 1595
PsuI	RGATCY	3 cut(s)	74, 90, 1670
PsyI	GACNNNGTC	1 cut(s)	1487
PvuII	CAGCTG	1 cut(s)	1532
RsaI	GTAC	7 cut(s)	197, 344, 485, 503, 842, 1428, 1770
RsaNI	GTAC	7 cut(s)	196, 343, 484, 502, 841, 1427, 1769
RseI	CAYNNNNRTG	2 cut(s)	371, 1490
SaqAI	TTAA	3 cut(s)	885, 1740, 2066
SatI	GCNGC	8 cut(s)	237, 312, 349, 1530, 1575, 1585, 1893, 1998
Sau96I	GGNCC	6 cut(s)	461, 706, 801, 823, 876, 1595
ScaI	AGTACT	1 cut(s)	1770
SchI	GAGTC	5 cut(s)	633, 704, 816, 1277, 2011
ScrFI	CCNGG	7 cut(s)	69, 704, 779, 798, 799, 821, 969
SduI	GDGCHC	1 cut(s)	368
SfaNI	GCATC	3 cut(s)	28, 1316, 1984
SgrAI	CRCCGGYG	1 cut(s)	370
SinI	GGWCC	6 cut(s)	461, 706, 801, 823, 876, 1595
SmaI	CCCGGG	1 cut(s)	799
SmiMI	CAYNNNNRTG	2 cut(s)	371, 1490
SmlI	CTYRAG	1 cut(s)	1833
SmoI	CTYRAG	1 cut(s)	1833
SnaBI	TACGTA	1 cut(s)	933
SpeI	ACTAGT	2 cut(s)	1016, 1562
Sse9I	AATT	9 cut(s)	439, 645, 663, 870, 1320, 1394, 1818, 1881, 2039
SsiI	CCGC	6 cut(s)	51, 94, 293, 311, 362, 1584
SspMI	CTAG	6 cut(s)	587, 785, 944, 1017, 1077, 1563
StyD4I	CCNGG	7 cut(s)	67, 702, 777, 796, 797, 819, 967
StyI	CCWWGG	4 cut(s)	249, 264, 879, 918
TaaI	ACNGT	5 cut(s)	461, 1333, 1479, 1684, 2029
TaiI	ACGT	5 cut(s)	108, 304, 935, 1464, 1981
TaqI	TCGA	4 cut(s)	332, 993, 1010, 1419
TasI	AATT	9 cut(s)	439, 645, 663, 870, 1320, 1394, 1818, 1881, 2039
TatI	WGTACW	3 cut(s)	342, 501, 1768
TauI	GCSGC	2 cut(s)	314, 1587
TfiI	GAWTC	1 cut(s)	1535
Tru1I	TTAA	3 cut(s)	885, 1740, 2066
Tru9I	TTAA	3 cut(s)	885, 1740, 2066
TscAI	CASTG	6 cut(s)	685, 838, 1338, 1383, 1452, 1687
TseFI	GTSAC	2 cut(s)	295, 1019
TseI	GCWGC	6 cut(s)	236, 348, 1529, 1574, 1892, 1997
Tsp45I	GTSAC	2 cut(s)	295, 1019
TspDTI	ATGAA	6 cut(s)	461, 947, 1085, 1963, 1976, 2032
TspGWI	ACGGA	1 cut(s)	369
TspMI	CCCGGG	1 cut(s)	797
TspRI	CASTG	6 cut(s)	685, 838, 1338, 1383, 1452, 1687
Tth111I	GACNNNGTC	1 cut(s)	1487
Van91I	CCANNNNNTGG	1 cut(s)	837
VpaK11BI	GGWCC	6 cut(s)	461, 706, 801, 823, 876, 1595
XagI	CCTNNNNNAGG	1 cut(s)	66
XapI	RAATTY	2 cut(s)	1320, 2039
XceI	RCATGY	2 cut(s)	397, 1067
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1565
XmaI	CCCGGG	1 cut(s)	797
XmiI	GTMKAC	1 cut(s)	1650
XmnI	GAANNNNTTC	1 cut(s)	1415
XspI	CTAG	6 cut(s)	587, 785, 944, 1017, 1077, 1563
ZrmI	AGTACT	1 cut(s)	1770
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.