Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0010222

Physical Location & Seq

Genomic Coordinates Reverse (-)

19295039 .. 19297701

Gene Structure 2663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG203600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGCTCTGGTTCTGGAATCCTCTTCTTGCTGCTTCAGATCCCAACGGTCCATTATTCTACAAGGGTTGGTACCATTTTTTCTACCAGTACAATCCCAAAGGTGCAGTATGGGGAAACATAGTATGGGGTCATGCAGTATCCAGAGACTTGATCCATTGGCTTCACCTTCCTCTAGCAATGGTAGCTGATCAATGGTATGACATCAATGGAGTCTGGACTGGCTCGGCTACAATTCTCCCAAATGACCAAATTGTCATGCTCTACACTGGTTCAACCAATGAGTCAGTCCAGGTCCAATGTCTTGCATACCCTGCTGACCACAAAGACCCTCTCCTCACCAAGTGGGTCAAGTATTCCGGAAACCCGGTTCTAGTCCCCCCTCCCGGGACCGGAGTCAAGGACTTCCGGGACCCGACCACTGCTTGGTACACTACTGATGGGAAATGGAGGATTACAATTGGGTCCAAGGTTAACAAAACTGGTATATCTTTGGTTTATGACACCAAGGACTTTATTACGTATGAGCAACTAGATGGTGTGCTTCATGCTGTGCCTGGGACTGGAATGTGGGAATGTATCGATTTTTATCCTGTGTCGAAAACTAGTGACAAGGGGTTGGACACTTCTCAGAATGGGGCTGATGTGAAGCATGTGATGAAGGCTAGTCTTGATGATGATAGGAATGATTACTATGCATTGGGGTCTTATAATGAGAAGACTGGAAAATGGGTTCCTGATAATCAAAAGATTGATGTTGGGATTGGGATTAGGTATGATTATGGGAAGTTCTATGCTTCCAAGACCTTCTATGATCAGAACAAGCAGAGAAGGGTGTTGTGGGGTTGGATTGGAGAGTCCGATAGTGAGAATGCTGATGTCAAGAAGGGTTGGGCATCTCTTCAGGGAATTCCAAGAACAGTGTTGTTTGATCAAAAGACTGGTAGCAATCTACTTCAATGGCCAGTGGAGGAGATTGAGAAATTGAGATTGAACAAGAAGAACTTCGACAAGGTACAAGTCAAGGCAGGGTCAGTGGTGCCACTTGACGTTGGCACAGCTACACAGTTGGACATTGTCGTGGAGTTTGAGTTGGATCAGAAGGTTGTAGAGAGCGCAGCTGAATCCAACGAGGAGTTCAGTTGCCAAACTAGTGGTGGAGCTGCCAAACGCGGCGCATTGGGACCCTTTGGTCTTCTTGTTCTTGCAGATGACAGCCTCTCTGAGCGCACTCCTGTCTACTTTTATGTTGTCAAAGGATCTGGTGGCACTGTCAATACCTACTTCTGTGCTGATCAAACAAGGTCTTCTGTGGCAACTGATGTTGTTAAACAAGTTAGTGGTAGCTATGTTCCAGTACTGAAAGGTGAAACGCTATCTCTGAGAATACTGGTTGATCATTCAATAATTGAAAGCTTTGCTCAAGGTGGACGAACAACGATAACAACGCGCGTTTACCCAACTCAGGCAATTTATGGAGCTGCAAGGCTCTTTTTGTTCAACAATGCTACTGACACCAGTTTTACTGCCTCACTCCAGATATGGCAGATGAACTCTGCATTCATACGTCCATTCTCACCTGATGCAGCGAGTCATGCAAGCTTCACCCCTGTTACAGTATTTATCAAATTCATCGTCCCATTTGGGATTTTTTTAACTTTATATTTTGTAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004553 GO:0004564 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0016787 GO:0016798 GO:0022622 GO:0030312 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071944 GO:0080022 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

DUF3357 Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

557

Amino Acids

62.17

Weight (kDa)

6.03

Isoelectric Point (pI)

30.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	12 - 321	1.1e-98	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	324 - 515	1.4e-25	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12240 AT1G62660 AT1G62660 AT1G62660 AT1G62660
fragaria_vesca	FvH4_5g00290 FvH4_5g00290 FvH4_5g00290
malus_domestica	MD06G1066600.v1.1
prunus_persica	Prupe.5G075600_v2.0.a1 Prupe.5G075600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0202311
rosa_laevigata	RLG00000003612
rosa_multiflora	Rmu_sc0010249.1_g000001
rosa_roxburghii	Rroxscaffold_3G00254670
rosa_rugosa	Rorug07G0069800
rosa_samantha	Rh7AG196900 Rh7BG198200 Rh7CG208100 Rh7DG203600
rosa_wichuraiana	Rw7G017260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	708
AasI	GACNNNNNNGTC	2 cut(s)	251, 1188
Acc65I	GGTACC	1 cut(s)	69
AccB1I	GGYRCC	2 cut(s)	69, 1036
AccB7I	CCANNNNNTGG	1 cut(s)	423
AccI	GTMKAC	1 cut(s)	1236
AccII	CGCG	3 cut(s)	1170, 1447, 1449
AccIII	TCCGGA	1 cut(s)	356
AciI	CCGC	1 cut(s)	1170
AclWI	GGATC	4 cut(s)	32, 145, 1101, 1264
AcoI	YGGCCR	1 cut(s)	959
AcsI	RAATTY	2 cut(s)	906, 1625
AcuI	CTGAAG	2 cut(s)	18, 884
AdeI	CACNNNGTG	1 cut(s)	342
AfaI	GTAC	5 cut(s)	71, 89, 428, 1014, 1356
AfiI	CCNNNNNNNGG	6 cut(s)	383, 384, 389, 423, 560, 1462
AgsI	TTSAA	6 cut(s)	273, 956, 991, 1401, 1409, 1498
AhlI	ACTAGT	2 cut(s)	602, 1148
AjnI	CCWGG	2 cut(s)	288, 553
AjuI	GAANNNNNNNTTGG	2 cut(s)	1118, 1150
AloI	GAACNNNNNNTCC	4 cut(s)	351, 383, 714, 746
AluBI	AGCT	8 cut(s)	185, 1058, 1118, 1160, 1344, 1413, 1478, 1599
AluI	AGCT	8 cut(s)	185, 1058, 1118, 1160, 1344, 1413, 1478, 1599
Alw26I	GTCTC	1 cut(s)	138
AlwI	GGATC	4 cut(s)	32, 145, 1101, 1264
Ama87I	CYCGRG	1 cut(s)	383
Aor13HI	TCCGGA	1 cut(s)	356
AoxI	GGCC	1 cut(s)	959
ApeKI	GCWGC	5 cut(s)	29, 1115, 1160, 1478, 1583
ApoI	RAATTY	2 cut(s)	906, 1625
ArsI	GACNNNNNNTTYG	2 cut(s)	1617, 1649
Asp700I	GAANNNNTTC	1 cut(s)	1001
Asp718I	GGTACC	1 cut(s)	69
AspLEI	GCGC	4 cut(s)	1115, 1175, 1227, 1449
AspS9I	GGNCC	6 cut(s)	47, 292, 387, 409, 462, 1181
AsuC2I	CCSGG	4 cut(s)	365, 384, 385, 407
AsuHPI	GGTGA	5 cut(s)	155, 328, 1376, 1566, 1594
AvaI	CYCGRG	1 cut(s)	383
AvaII	GGWCC	6 cut(s)	47, 292, 387, 409, 462, 1181
BalI	TGGCCA	1 cut(s)	961
BanI	GGYRCC	2 cut(s)	69, 1036
BbsI	GAAGAC	3 cut(s)	722, 1184, 1296
BbvI	GCAGC	5 cut(s)	16, 1127, 1147, 1465, 1595
BccI	CCATC	2 cut(s)	431, 527
BciT130I	CCWGG	2 cut(s)	290, 555
BciVI	GTATCC	1 cut(s)	148
BclI	TGATCA	5 cut(s)	187, 811, 928, 1291, 1393
BcnI	CCSGG	4 cut(s)	365, 384, 385, 407
BcoDI	GTCTC	1 cut(s)	138
BcuI	ACTAGT	2 cut(s)	602, 1148
BfaI	CTAG	6 cut(s)	173, 371, 530, 603, 663, 1149
BfuI	GTATCC	1 cut(s)	148
BisI	GCNGC	6 cut(s)	30, 1116, 1161, 1171, 1479, 1584
BlsI	GCNGC	6 cut(s)	31, 1117, 1162, 1172, 1480, 1585
BmcAI	AGTACT	1 cut(s)	1356
Bme1390I	CCNGG	6 cut(s)	290, 365, 384, 385, 407, 555
Bme18I	GGWCC	6 cut(s)	47, 292, 387, 409, 462, 1181
BmeT110I	CYCGRG	1 cut(s)	383
BmgT120I	GGNCC	6 cut(s)	47, 292, 387, 409, 462, 1181
BmiI	GGNNCC	9 cut(s)	71, 388, 410, 411, 463, 732, 1038, 1182, 1183
BmrFI	CCNGG	6 cut(s)	290, 365, 384, 385, 407, 555
BmsI	GCATC	2 cut(s)	902, 1570
BoxI	GACNNNNGTC	1 cut(s)	392
BpiI	GAAGAC	3 cut(s)	722, 1184, 1296
BpmI	CTGGAG	1 cut(s)	1517
BpuEI	CTTGAG	1 cut(s)	1404
BpuMI	CCSGG	4 cut(s)	365, 384, 385, 407
Bsa29I	ATCGAT	1 cut(s)	579
BsaAI	YACGTR	1 cut(s)	519
BsaBI	GATNNNNATC	1 cut(s)	585
BsaJI	CCNNGG	4 cut(s)	383, 465, 504, 554
BsaWI	WCCGGW	2 cut(s)	356, 389
BsaXI	ACNNNNNCTCC	2 cut(s)	1073, 1103
Bsc4I	CCNNNNNNNGG	6 cut(s)	383, 384, 389, 423, 560, 1462
Bse3DI	GCAATG	1 cut(s)	183
Bse8I	GATNNNNATC	1 cut(s)	585
BseAI	TCCGGA	1 cut(s)	356
BseBI	CCWGG	2 cut(s)	290, 555
BseCI	ATCGAT	1 cut(s)	579
BseDI	CCNNGG	4 cut(s)	383, 465, 504, 554
BseJI	GATNNNNATC	1 cut(s)	585
BseLI	CCNNNNNNNGG	6 cut(s)	383, 384, 389, 423, 560, 1462
BseMI	GCAATG	1 cut(s)	183
BseMII	CTCAG	4 cut(s)	641, 1212, 1370, 1475
BseRI	GAGGAG	3 cut(s)	323, 983, 1145
BseXI	GCAGC	5 cut(s)	16, 1127, 1147, 1465, 1595
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	3 cut(s)	1170, 1447, 1449
BshFI	GGCC	1 cut(s)	961
BshNI	GGYRCC	2 cut(s)	69, 1036
BshVI	ATCGAT	1 cut(s)	579
BsiHKCI	CYCGRG	1 cut(s)	383
BsiSI	CCGG	5 cut(s)	357, 365, 384, 390, 406
BslFI	GGGAC	6 cut(s)	359, 400, 422, 571, 1194, 1619
BslI	CCNNNNNNNGG	6 cut(s)	383, 384, 389, 423, 560, 1462
BsmAI	GTCTC	1 cut(s)	138
BsmFI	GGGAC	6 cut(s)	359, 400, 422, 571, 1194, 1619
BsmI	GAATGC	2 cut(s)	874, 1556
BsnI	GGCC	1 cut(s)	961
BsoBI	CYCGRG	1 cut(s)	383
Bsp13I	TCCGGA	1 cut(s)	356
Bsp143I	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
BspACI	CCGC	1 cut(s)	1170
BspANI	GGCC	1 cut(s)	961
BspCNI	CTCAG	4 cut(s)	640, 1213, 1371, 1474
BspDI	ATCGAT	1 cut(s)	579
BspEI	TCCGGA	1 cut(s)	356
BspFNI	CGCG	3 cut(s)	1170, 1447, 1449
BspLI	GGNNCC	9 cut(s)	71, 388, 410, 411, 463, 732, 1038, 1182, 1183
BspPI	GGATC	4 cut(s)	32, 145, 1101, 1264
BspT107I	GGYRCC	2 cut(s)	69, 1036
BsrDI	GCAATG	1 cut(s)	183
BssECI	CCNNGG	4 cut(s)	383, 465, 504, 554
BssMI	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
BssT1I	CCWWGG	2 cut(s)	465, 504
Bst2UI	CCWGG	2 cut(s)	290, 555
Bst4CI	ACNGT	5 cut(s)	47, 919, 1065, 1270, 1615
Bst6I	CTCTTC	2 cut(s)	27, 903
BstAPI	GCANNNNNTGC	1 cut(s)	311
BstBAI	YACGTR	1 cut(s)	519
BstC8I	GCNNGC	1 cut(s)	1597
BstDEI	CTNAG	4 cut(s)	627, 1221, 1379, 1461
BstFNI	CGCG	3 cut(s)	1170, 1447, 1449
BstHHI	GCGC	4 cut(s)	1115, 1175, 1227, 1449
BstKTI	GATC	9 cut(s)	40, 153, 190, 814, 931, 1096, 1259, 1294, 1396
BstMAI	GTCTC	1 cut(s)	138
BstMBI	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
BstMWI	GCNNNNNNNGC	3 cut(s)	182, 311, 1592
BstNI	CCWGG	2 cut(s)	290, 555
BstNSI	RCATGY	1 cut(s)	653
BstPAI	GACNNNNGTC	1 cut(s)	392
BstSCI	CCNGG	6 cut(s)	288, 363, 382, 383, 405, 553
BstSNI	TACGTA	1 cut(s)	519
BstUI	CGCG	3 cut(s)	1170, 1447, 1449
BstV1I	GCAGC	5 cut(s)	16, 1127, 1147, 1465, 1595
BstV2I	GAAGAC	3 cut(s)	722, 1184, 1296
BstX2I	RGATCY	2 cut(s)	37, 1256
BstXI	CCANNNNNNTGG	1 cut(s)	1151
BstYI	RGATCY	2 cut(s)	37, 1256
Bsu15I	ATCGAT	1 cut(s)	579
BsuI	GTATCC	1 cut(s)	148
BsuRI	GGCC	1 cut(s)	961
BsuTUI	ATCGAT	1 cut(s)	579
BtsI	GCAGTG	1 cut(s)	417
BtsIMutI	CAGTG	6 cut(s)	264, 417, 924, 969, 1038, 1266
Cac8I	GCNNGC	1 cut(s)	1597
CfoI	GCGC	4 cut(s)	1115, 1175, 1227, 1449
Cfr13I	GGNCC	6 cut(s)	47, 292, 387, 409, 462, 1181
Cfr9I	CCCGGG	1 cut(s)	383
ClaI	ATCGAT	1 cut(s)	579
Csp6I	GTAC	5 cut(s)	70, 88, 427, 1013, 1355
CviAII	CATG	5 cut(s)	131, 256, 545, 650, 1592
CviQI	GTAC	5 cut(s)	70, 88, 427, 1013, 1355
DdeI	CTNAG	4 cut(s)	627, 1221, 1379, 1461
DpnI	GATC	9 cut(s)	39, 152, 189, 813, 930, 1095, 1258, 1293, 1395
DpnII	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
DraIII	CACNNNGTG	1 cut(s)	342
DrdI	GACNNNNNNGTC	2 cut(s)	251, 1188
DseDI	GACNNNNNNGTC	2 cut(s)	251, 1188
EaeI	YGGCCR	1 cut(s)	959
Eam1104I	CTCTTC	2 cut(s)	27, 903
EarI	CTCTTC	2 cut(s)	27, 903
Eco105I	TACGTA	1 cut(s)	519
Eco130I	CCWWGG	2 cut(s)	465, 504
Eco47I	GGWCC	6 cut(s)	47, 292, 387, 409, 462, 1181
Eco57I	CTGAAG	2 cut(s)	18, 884
Eco88I	CYCGRG	1 cut(s)	383
EcoO109I	RGGNCCY	2 cut(s)	409, 1181
EcoRI	GAATTC	1 cut(s)	906
EcoRII	CCWGG	2 cut(s)	288, 553
EcoT14I	CCWWGG	2 cut(s)	465, 504
EcoT22I	ATGCAT	1 cut(s)	697
ErhI	CCWWGG	2 cut(s)	465, 504
FaeI	CATG	5 cut(s)	134, 259, 548, 653, 1595
FalI	AAGNNNNNCTT	2 cut(s)	986, 1018
FaqI	GGGAC	6 cut(s)	359, 400, 422, 571, 1194, 1619
FatI	CATG	5 cut(s)	130, 255, 544, 649, 1591
FbaI	TGATCA	5 cut(s)	187, 811, 928, 1291, 1393
FblI	GTMKAC	1 cut(s)	1236
Fnu4HI	GCNGC	6 cut(s)	30, 1116, 1161, 1171, 1479, 1584
Fsp4HI	GCNGC	6 cut(s)	30, 1116, 1161, 1171, 1479, 1584
FspBI	CTAG	6 cut(s)	173, 371, 530, 603, 663, 1149
GlaI	GCGC	4 cut(s)	1114, 1174, 1226, 1448
GluI	GCNGC	6 cut(s)	30, 1116, 1161, 1171, 1479, 1584
GsuI	CTGGAG	1 cut(s)	1517
HaeIII	GGCC	1 cut(s)	961
HapII	CCGG	5 cut(s)	357, 365, 384, 390, 406
HhaI	GCGC	4 cut(s)	1115, 1175, 1227, 1449
Hin1II	CATG	5 cut(s)	134, 259, 548, 653, 1595
Hin6I	GCGC	4 cut(s)	1113, 1173, 1225, 1447
HinP1I	GCGC	4 cut(s)	1113, 1173, 1225, 1447
HincII	GTYRAC	1 cut(s)	472
HindII	GTYRAC	1 cut(s)	472
HindIII	AAGCTT	2 cut(s)	1411, 1597
HinfI	GANTC	7 cut(s)	16, 210, 281, 393, 854, 1121, 1588
HpaI	GTTAAC	1 cut(s)	472
HpaII	CCGG	5 cut(s)	357, 365, 384, 390, 406
HphI	GGTGA	5 cut(s)	155, 328, 1376, 1566, 1594
Hpy166II	GTNNAC	5 cut(s)	429, 472, 1237, 1427, 1453
Hpy188I	TCNGA	7 cut(s)	37, 630, 816, 859, 1098, 1222, 1380
Hpy188III	TCNNGA	8 cut(s)	13, 141, 214, 357, 668, 734, 880, 1534
Hpy8I	GTNNAC	5 cut(s)	429, 472, 1237, 1427, 1453
HpyAV	CCTTC	6 cut(s)	176, 652, 814, 822, 877, 1093
HpyCH4III	ACNGT	5 cut(s)	47, 919, 1065, 1270, 1615
HpyCH4IV	ACGT	3 cut(s)	518, 1047, 1564
HpyCH4V	TGCA	9 cut(s)	104, 134, 305, 695, 1205, 1481, 1556, 1583, 1595
HpyF10VI	GCNNNNNNNGC	3 cut(s)	182, 311, 1592
HpyF3I	CTNAG	4 cut(s)	627, 1221, 1379, 1461
HpySE526I	ACGT	3 cut(s)	518, 1047, 1564
Hsp92II	CATG	5 cut(s)	134, 259, 548, 653, 1595
HspAI	GCGC	4 cut(s)	1113, 1173, 1225, 1447
KflI	GGGWCCC	2 cut(s)	409, 1181
Kpn2I	TCCGGA	1 cut(s)	356
KpnI	GGTACC	1 cut(s)	73
Ksp22I	TGATCA	5 cut(s)	187, 811, 928, 1291, 1393
KspAI	GTTAAC	1 cut(s)	472
Kzo9I	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
LmnI	GCTCC	2 cut(s)	1157, 1475
Lsp1109I	GCAGC	5 cut(s)	16, 1127, 1147, 1465, 1595
LweI	GCATC	2 cut(s)	902, 1570
MaeI	CTAG	6 cut(s)	173, 371, 530, 603, 663, 1149
MaeII	ACGT	3 cut(s)	518, 1047, 1564
MaeIII	GTNAC	2 cut(s)	605, 1609
MalI	GATC	9 cut(s)	39, 152, 189, 813, 930, 1095, 1258, 1293, 1395
MboI	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
MboII	GAAGA	6 cut(s)	14, 727, 890, 1009, 1184, 1296
MfeI	CAATTG	1 cut(s)	456
MflI	RGATCY	2 cut(s)	37, 1256
MlsI	TGGCCA	1 cut(s)	961
MluCI	AATT	8 cut(s)	231, 249, 456, 906, 980, 1404, 1467, 1625
MluNI	TGGCCA	1 cut(s)	961
MlyI	GAGTC	5 cut(s)	219, 290, 402, 863, 1597
MmeI	TCCRAC	5 cut(s)	597, 824, 1047, 1071, 1149
Mox20I	TGGCCA	1 cut(s)	961
Mph1103I	ATGCAT	1 cut(s)	697
MroI	TCCGGA	1 cut(s)	356
MroXI	GAANNNNTTC	1 cut(s)	1001
MscI	TGGCCA	1 cut(s)	961
MseI	TTAA	3 cut(s)	471, 1326, 1652
MslI	CAYNNNNRTG	1 cut(s)	1076
Msp20I	TGGCCA	1 cut(s)	961
MspA1I	CMGCKG	1 cut(s)	1118
MspI	CCGG	5 cut(s)	357, 365, 384, 390, 406
MspR9I	CCNGG	6 cut(s)	290, 365, 384, 385, 407, 555
MunI	CAATTG	1 cut(s)	456
Mva1269I	GAATGC	2 cut(s)	874, 1556
MvaI	CCWGG	2 cut(s)	290, 555
MvnI	CGCG	3 cut(s)	1170, 1447, 1449
MwoI	GCNNNNNNNGC	3 cut(s)	182, 311, 1592
NciI	CCSGG	4 cut(s)	365, 384, 385, 407
NdeII	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
NlaIII	CATG	5 cut(s)	134, 259, 548, 653, 1595
NlaIV	GGNNCC	9 cut(s)	71, 388, 410, 411, 463, 732, 1038, 1182, 1183
NmeAIII	GCCGAG	1 cut(s)	203
NmuCI	GTSAC	1 cut(s)	605
NsiI	ATGCAT	1 cut(s)	697
NspI	RCATGY	1 cut(s)	653
PctI	GAATGC	2 cut(s)	874, 1556
PdmI	GAANNNNTTC	1 cut(s)	1001
PfeI	GAWTC	2 cut(s)	16, 1121
PflFI	GACNNNGTC	1 cut(s)	1073
PflMI	CCANNNNNTGG	1 cut(s)	423
PfoI	TCCNGGA	1 cut(s)	405
PkrI	GCNGC	6 cut(s)	31, 1117, 1162, 1172, 1480, 1585
PleI	GAGTC	5 cut(s)	218, 289, 401, 862, 1596
PpsI	GAGTC	5 cut(s)	218, 289, 401, 862, 1596
Ppu21I	YACGTR	1 cut(s)	519
PpuMI	RGGWCCY	2 cut(s)	409, 1181
PshAI	GACNNNNGTC	1 cut(s)	392
PsiI	TTATAA	1 cut(s)	708
Psp5II	RGGWCCY	2 cut(s)	409, 1181
Psp6I	CCWGG	2 cut(s)	288, 553
PspGI	CCWGG	2 cut(s)	288, 553
PspN4I	GGNNCC	9 cut(s)	71, 388, 410, 411, 463, 732, 1038, 1182, 1183
PspPI	GGNCC	6 cut(s)	47, 292, 387, 409, 462, 1181
PspPPI	RGGWCCY	2 cut(s)	409, 1181
PsuI	RGATCY	2 cut(s)	37, 1256
PsyI	GACNNNGTC	1 cut(s)	1073
PvuII	CAGCTG	1 cut(s)	1118
RsaI	GTAC	5 cut(s)	71, 89, 428, 1014, 1356
RsaNI	GTAC	5 cut(s)	70, 88, 427, 1013, 1355
RseI	CAYNNNNRTG	1 cut(s)	1076
SaqAI	TTAA	3 cut(s)	471, 1326, 1652
SatI	GCNGC	6 cut(s)	30, 1116, 1161, 1171, 1479, 1584
Sau3AI	GATC	9 cut(s)	37, 150, 187, 811, 928, 1093, 1256, 1291, 1393
Sau96I	GGNCC	6 cut(s)	47, 292, 387, 409, 462, 1181
ScaI	AGTACT	1 cut(s)	1356
SchI	GAGTC	5 cut(s)	219, 290, 402, 863, 1597
ScrFI	CCNGG	6 cut(s)	290, 365, 384, 385, 407, 555
SfaNI	GCATC	2 cut(s)	902, 1570
SinI	GGWCC	6 cut(s)	47, 292, 387, 409, 462, 1181
SmaI	CCCGGG	1 cut(s)	385
SmiMI	CAYNNNNRTG	1 cut(s)	1076
SmlI	CTYRAG	1 cut(s)	1419
SmoI	CTYRAG	1 cut(s)	1419
SnaBI	TACGTA	1 cut(s)	519
SpeI	ACTAGT	2 cut(s)	602, 1148
Sse9I	AATT	8 cut(s)	231, 249, 456, 906, 980, 1404, 1467, 1625
SsiI	CCGC	1 cut(s)	1170
SspMI	CTAG	6 cut(s)	173, 371, 530, 603, 663, 1149
StyD4I	CCNGG	6 cut(s)	288, 363, 382, 383, 405, 553
StyI	CCWWGG	2 cut(s)	465, 504
TaaI	ACNGT	5 cut(s)	47, 919, 1065, 1270, 1615
TaiI	ACGT	3 cut(s)	521, 1050, 1567
TaqI	TCGA	3 cut(s)	579, 596, 1005
TasI	AATT	8 cut(s)	231, 249, 456, 906, 980, 1404, 1467, 1625
TatI	WGTACW	2 cut(s)	87, 1354
TauI	GCSGC	1 cut(s)	1173
TfiI	GAWTC	2 cut(s)	16, 1121
Tru1I	TTAA	3 cut(s)	471, 1326, 1652
Tru9I	TTAA	3 cut(s)	471, 1326, 1652
TscAI	CASTG	6 cut(s)	271, 424, 924, 969, 1038, 1273
TseFI	GTSAC	1 cut(s)	605
TseI	GCWGC	5 cut(s)	29, 1115, 1160, 1478, 1583
Tsp45I	GTSAC	1 cut(s)	605
TspDTI	ATGAA	5 cut(s)	533, 671, 1549, 1562, 1618
TspMI	CCCGGG	1 cut(s)	383
TspRI	CASTG	6 cut(s)	271, 424, 924, 969, 1038, 1273
Tth111I	GACNNNGTC	1 cut(s)	1073
Van91I	CCANNNNNTGG	1 cut(s)	423
VpaK11BI	GGWCC	6 cut(s)	47, 292, 387, 409, 462, 1181
XapI	RAATTY	2 cut(s)	906, 1625
XceI	RCATGY	1 cut(s)	653
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1151
XmaI	CCCGGG	1 cut(s)	383
XmiI	GTMKAC	1 cut(s)	1236
XmnI	GAANNNNTTC	1 cut(s)	1001
XspI	CTAG	6 cut(s)	173, 371, 530, 603, 663, 1149
ZrmI	AGTACT	1 cut(s)	1356
Zsp2I	ATGCAT	1 cut(s)	697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.