Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009412

Physical Location & Seq

Genomic Coordinates Forward (+)

20850954 .. 20855846

Gene Structure 4893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18184

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGTTTCATAGGAACTTGCTACCATTGTTGTCAAAACAAGTCACCCTTCAGCTTAAACCTCGTCTCACCCGAGCAATGAGCTCCCAGTTCCAGCTCCGAGTCAACCCACTCACCGGCAACTCGGAGTGGATCGTCATCGACGAGAACGAACCAGAAGGCCCAACTTCCAACACTTCCCAAAATGCCCTCCTCGCCACAACTTCGTACCTCGACATGCTCAACGACTCTCCCAGGAACAGAGCTTACCGCCAAGCCATAGACAAGACCGTAACTAAACCCTGCCGTGTTCTTGATATTGGCGCCGGAACTGGGTTGCTGTCGATGATGGCTGCGCGGGCAATGGGGTCGACGACATGTCGTATGGTGACGGCTTGTGAGTCTTACCTTCCAATGGTGAAGCTAATGAAGAAGGTTCTGCGCTTGAACGACATGGAAAAGCAGATAAAACTGATCAACAAGCGTTCTGATGAGCTCGAGTTGGGTGTTGATATCAATTCTCGCGCTCAAGTTCTTGTTAGTGAGATATTGGATTCAGAGTTGTTGGGTGAAGGGTTGATACCTTCTCTGCAACATGCGCATGACATGTTGTTGGTGGAGAGTCCTGAAACGGTGCCGTATAGAGCAACCACTTATGGCCAGTTGGTTGAGAGCACATTTTTGTGGAAGCTTCACGATTTACGCGGTAATGAGGCAGAAGCGTGTGATGGGATTCGTCTTGTTCCGACCGGGTTTGAGAATGTTTTGGGTGTTAAGCAGCAACAATATGCGCTTCATTGTAATGCTATAGCAAATGAAGTGAAATTGCTGTCGGAACCCTTCAAGATCTTTGAATTTGATTTTTCGAAACGGCCAGAGAGTCGTGGAGAAACTGAGCTATCTATAAAGGCAACTAATGATGGTCGAGTTCATGCTGTAATTTCATGGTGGATACTTCAGCTTGATCGAGAAGGGACAATCTTTTATTCCACTGCCCCTAGGTGGATAAATTTGCCAGTCAACATGAGTCACGGGGATTGGTGTGACCATTGGAAACAGTGTGTTTGGTTTGTCCCCGGTGGAGGTATGTCCGTAAACAAGGATGAAGAAGTTTGTTTGCATGCTGTTCATACAGATATTAGCATCTCATACAATATCAAGAGCCCCATATCAAGAAACAAGAGTATGCAGTATGACTTAACTAGCAGGGATCTCAAGCTCATACTACCACCAGAAAGAATTGCAATTTATGGAGACAGTGAATGGAGGCATACCATGTTTAATGCAATAAGTAATGCGTTACAGGGAAGAGTTGATCCATTATGCATTGTTGCAGATGACAGCGTCTTCTTAACTCTACTGGTGGCGCATCTTTCTAAAACATCACATGTGATGTCATTCTTTCCGGGGTTGCAAGACAAGGGTTTGCAATATTTGCAAGCTGTCGCCAGTGCCAACAATTTCTCAGTGGATCGTGTAGAGTATATTAAAAAGAAGAAAACTATGTTAACTCTGCATGACACACATCAGAAAAAGGTTGACCTGTTGATTGCAGAACCTTTCTACTATGGAACAGATAACATGCTTCCATGGCAGAACCTCCGGTTCTGGAATGAGCGGACAATGCTGGATTCTGTCCTATCTGAAGATGCATTGATAATGCCTTGTAAGGCAATATTGAAAGCTTGTGCATTGTCTATCCCTGATCTTTGGAATAGTCGTCGTAGCTTAAGTAAGATCGAAGGGTTTGACCATTCTGTTGTAAACTCCACCTTAGGGGCATGTGGTGAACTACCTGGGGAGCAAGAGGGTCCTTGTCTGCCCTATTTTATTTGGCAGTGTGGAAATGTTAAGAAACTCAGTGAAGCATTTACGGTCATGGAGTTTGATTTCTCAAAACTTATAATGCCATCTCATGGAAAAACCCAGATTGAATTTACTGTGTCAGGGATATGCCACGGGTTTGCAGTATGGATTGATTGGGTGATGGATTCAGAGCACTCCATTGTATTGTCTACAGGGCCAGATAAGAGGTATTGGAAGCAAGGAGTAAAGCTTCTGGCCAAGCCTGTGGGAGTTGGCAAAAGTTGCTCTTCTGCAGTTATTGAAGCTTCGTTTGACCCATCAAGTGGCGACCTGGATGTTAGACATGCTTTCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019918 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035241 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PrmA

Protein Analysis

712

Amino Acids

80.07

Weight (kDa)

6.23

Isoelectric Point (pI)

43.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRMT_C	PF22528	265 - 380	1.1e-13	Arginine methyltransferase oligomerization subdomain
PRMT_C	PF22528	610 - 690	2.5e-07	Arginine methyltransferase oligomerization subdomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16570
fragaria_vesca	FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820
malus_domestica	MD04G1063800.v1.1
prunus_persica	Prupe.5G069000_v2.0.a1 Prupe.5G069000_v2.0.a1
pyrus_communis	pycom04g05760
rosa_chinensis	RchiOBHm_Chr7g0203171
rosa_laevigata	RLG00000003546
rosa_multiflora	Rmu_sc0005566.1_g000011 Rmu_sc0014667.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254020
rosa_rugosa	Rorug07G0074800
rosa_samantha	Rh7AG204000 Rh7BG203300 Rh7CG214900 Rh7DG210700
rosa_wichuraiana	Rw7G017780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1880
Acc16I	TGCGCA	1 cut(s)	576
AccB1I	GGYRCC	2 cut(s)	299, 610
AccB7I	CCANNNNNTGG	2 cut(s)	1892, 2105
AccBSI	CCGCTC	1 cut(s)	1594
AccI	GTMKAC	2 cut(s)	347, 1991
AccII	CGCG	3 cut(s)	334, 501, 681
AciI	CCGC	4 cut(s)	247, 334, 681, 1594
AclWI	GGATC	4 cut(s)	137, 1194, 1286, 1455
AcoI	YGGCCR	3 cut(s)	634, 848, 2037
AcsI	RAATTY	3 cut(s)	830, 985, 1910
AcuI	CTGAAG	3 cut(s)	32, 917, 1641
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	1 cut(s)	206
AfiI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
AflII	CTTAAG	1 cut(s)	1705
AflIII	ACRYGT	3 cut(s)	353, 582, 1363
AgsI	TTSAA	6 cut(s)	424, 820, 830, 1657, 1910, 2084
AhdI	GACNNNNNGTC	1 cut(s)	354
AjnI	CCWGG	3 cut(s)	230, 1771, 2112
Alw21I	GWGCWC	4 cut(s)	83, 474, 653, 1977
Alw26I	GTCTC	2 cut(s)	68, 1224
AlwI	GGATC	4 cut(s)	137, 1194, 1286, 1455
Ama87I	CYCGRG	2 cut(s)	69, 473
AoxI	GGCC	5 cut(s)	157, 634, 848, 1997, 2037
ApeKI	GCWGC	2 cut(s)	329, 754
ApoI	RAATTY	3 cut(s)	830, 985, 1910
AspA2I	CCTAGG	1 cut(s)	974
AspLEI	GCGC	7 cut(s)	302, 334, 420, 503, 577, 769, 1345
AspS9I	GGNCC	3 cut(s)	158, 1787, 1997
AsuC2I	CCSGG	3 cut(s)	727, 1053, 1383
AsuHPI	GGTGA	8 cut(s)	34, 58, 103, 376, 406, 557, 1775, 1972
AsuII	TTCGAA	1 cut(s)	842
AvaI	CYCGRG	2 cut(s)	69, 473
AvaII	GGWCC	1 cut(s)	1787
AvrII	CCTAGG	1 cut(s)	974
AxyI	CCTNAGG	1 cut(s)	1750
BalI	TGGCCA	2 cut(s)	636, 2039
BanI	GGYRCC	2 cut(s)	299, 610
BanII	GRGCYC	3 cut(s)	83, 474, 1142
BarI	GAAGNNNNNNTAC	2 cut(s)	540, 572
BbsI	GAAGAC	1 cut(s)	1315
Bbv12I	GWGCWC	4 cut(s)	83, 474, 653, 1977
BbvI	GCAGC	2 cut(s)	316, 766
BccI	CCATC	6 cut(s)	319, 698, 890, 1894, 1957, 2107
BceAI	ACGGC	4 cut(s)	267, 384, 598, 863
BcgI	CGANNNNNNTGC	2 cut(s)	327, 361
BciT130I	CCWGG	3 cut(s)	232, 1773, 2114
BciVI	GTATCC	1 cut(s)	921
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	3 cut(s)	727, 1053, 1383
BcoDI	GTCTC	2 cut(s)	68, 1224
BfaI	CTAG	2 cut(s)	975, 1179
BfmI	CTRYAG	3 cut(s)	783, 1992, 2073
BfoI	RGCGCY	1 cut(s)	303
BfrI	CTTAAG	1 cut(s)	1705
BfuI	GTATCC	1 cut(s)	921
BglII	AGATCT	1 cut(s)	822
BisI	GCNGC	2 cut(s)	330, 755
BlnI	CCTAGG	1 cut(s)	974
BlsI	GCNGC	2 cut(s)	331, 756
Bme1390I	CCNGG	6 cut(s)	232, 727, 1053, 1383, 1773, 2114
Bme18I	GGWCC	1 cut(s)	1787
BmeRI	GACNNNNNGTC	1 cut(s)	354
BmeT110I	CYCGRG	2 cut(s)	69, 473
BmgT120I	GGNCC	3 cut(s)	158, 1787, 1997
BmiI	GGNNCC	4 cut(s)	301, 612, 813, 1788
BmrFI	CCNGG	6 cut(s)	232, 727, 1053, 1383, 1773, 2114
BmrI	ACTGGG	2 cut(s)	79, 318
BmsI	GCATC	3 cut(s)	1128, 1354, 1615
BmuI	ACTGGG	2 cut(s)	79, 318
BpiI	GAAGAC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	842
BpuEI	CTTGAG	2 cut(s)	489, 1175
BpuMI	CCSGG	3 cut(s)	727, 1053, 1383
BsaBI	GATNNNNATC	1 cut(s)	134
BsaHI	GRCGYC	1 cut(s)	300
BsaJI	CCNNGG	7 cut(s)	230, 974, 1051, 1382, 1565, 1772, 1933
BsaWI	WCCGGW	1 cut(s)	1578
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	6 cut(s)	85, 313, 637, 992, 1341, 1425
Bse21I	CCTNAGG	1 cut(s)	1750
Bse3DI	GCAATG	2 cut(s)	81, 345
Bse8I	GATNNNNATC	1 cut(s)	134
BseBI	CCWGG	3 cut(s)	232, 1773, 2114
BseDI	CCNNGG	7 cut(s)	230, 974, 1051, 1382, 1565, 1772, 1933
BseGI	GGATG	2 cut(s)	1084, 2122
BseJI	GATNNNNATC	1 cut(s)	134
BseLI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
BseMI	GCAATG	2 cut(s)	81, 345
BseMII	CTCAG	3 cut(s)	861, 1455, 1849
BseNI	ACTGG	6 cut(s)	85, 313, 637, 992, 1341, 1425
BseRI	GAGGAG	1 cut(s)	179
BseXI	GCAGC	2 cut(s)	316, 766
Bsh1236I	CGCG	3 cut(s)	334, 501, 681
Bsh1285I	CGRYCG	1 cut(s)	726
BshFI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BshNI	GGYRCC	2 cut(s)	299, 610
BsiEI	CGRYCG	1 cut(s)	726
BsiHKAI	GWGCWC	4 cut(s)	83, 474, 653, 1977
BsiHKCI	CYCGRG	2 cut(s)	69, 473
BsiSI	CCGG	6 cut(s)	114, 303, 726, 1053, 1382, 1579
BslFI	GGGAC	2 cut(s)	964, 1034
BslI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1752, 1892, 2105
BsmAI	GTCTC	2 cut(s)	68, 1224
BsmBI	CGTCTC	1 cut(s)	68
BsmFI	GGGAC	2 cut(s)	964, 1034
BsnI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BsoBI	CYCGRG	2 cut(s)	69, 473
Bsp119I	TTCGAA	1 cut(s)	842
Bsp1286I	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1977
Bsp143I	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
Bsp19I	CCATGG	1 cut(s)	1565
BspACI	CCGC	4 cut(s)	247, 334, 681, 1594
BspANI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BspCNI	CTCAG	3 cut(s)	862, 1454, 1848
BspFNI	CGCG	3 cut(s)	334, 501, 681
BspLI	GGNNCC	4 cut(s)	301, 612, 813, 1788
BspMAI	CTGCAG	1 cut(s)	2077
BspPI	GGATC	4 cut(s)	137, 1194, 1286, 1455
BspQI	GCTCTTC	1 cut(s)	2074
BspT104I	TTCGAA	1 cut(s)	842
BspT107I	GGYRCC	2 cut(s)	299, 610
BspTI	CTTAAG	1 cut(s)	1705
BsrBI	CCGCTC	1 cut(s)	1594
BsrDI	GCAATG	2 cut(s)	81, 345
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	6 cut(s)	85, 313, 637, 992, 1341, 1425
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	7 cut(s)	230, 974, 1051, 1382, 1565, 1772, 1933
BssMI	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
BssNI	GRCGYC	1 cut(s)	300
BssT1I	CCWWGG	2 cut(s)	974, 1565
Bst2UI	CCWGG	3 cut(s)	232, 1773, 2114
Bst4CI	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1852, 1918
Bst6I	CTCTTC	2 cut(s)	1279, 2074
BstACI	GRCGYC	1 cut(s)	300
BstAFI	CTTAAG	1 cut(s)	1705
BstAPI	GCANNNNNTGC	2 cut(s)	1411, 2064
BstBI	TTCGAA	1 cut(s)	842
BstC8I	GCNNGC	3 cut(s)	336, 1098, 1416
BstDEI	CTNAG	4 cut(s)	870, 1441, 1750, 1835
BstDSI	CCRYGG	2 cut(s)	1565, 1933
BstF5I	GGATG	2 cut(s)	1084, 2122
BstFNI	CGCG	3 cut(s)	334, 501, 681
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	7 cut(s)	302, 334, 420, 503, 577, 769, 1345
BstKTI	GATC	9 cut(s)	132, 453, 825, 943, 1189, 1294, 1450, 1684, 1716
BstMAI	GTCTC	2 cut(s)	68, 1224
BstMBI	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
BstMCI	CGRYCG	1 cut(s)	726
BstMWI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1567, 1600, 2064
BstNI	CCWGG	3 cut(s)	232, 1773, 2114
BstNSI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
BstSCI	CCNGG	6 cut(s)	230, 725, 1051, 1381, 1771, 2112
BstSFI	CTRYAG	3 cut(s)	783, 1992, 2073
BstUI	CGCG	3 cut(s)	334, 501, 681
BstV1I	GCAGC	2 cut(s)	316, 766
BstV2I	GAAGAC	1 cut(s)	1315
BstX2I	RGATCY	2 cut(s)	822, 1186
BstXI	CCANNNNNNTGG	1 cut(s)	2047
BstYI	RGATCY	2 cut(s)	822, 1186
Bsu36I	CCTNAGG	1 cut(s)	1750
BsuI	GTATCC	1 cut(s)	921
BsuRI	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
BtgI	CCRYGG	2 cut(s)	1565, 1933
BtsCI	GGATG	2 cut(s)	1084, 2122
BtsI	GCAGTG	2 cut(s)	966, 1820
BtsIMutI	CAGTG	7 cut(s)	966, 1040, 1240, 1432, 1449, 1820, 1843
Cac8I	GCNNGC	3 cut(s)	336, 1098, 1416
CfoI	GCGC	7 cut(s)	302, 334, 420, 503, 577, 769, 1345
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	158, 1787, 1997
CseI	GACGC	1 cut(s)	1309
Csp6I	GTAC	1 cut(s)	205
CviQI	GTAC	1 cut(s)	205
DdeI	CTNAG	4 cut(s)	870, 1441, 1750, 1835
DinI	GGCGCC	1 cut(s)	301
DpnI	GATC	9 cut(s)	131, 452, 824, 942, 1188, 1293, 1449, 1683, 1715
DpnII	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
DriI	GACNNNNNGTC	1 cut(s)	354
EaeI	YGGCCR	3 cut(s)	634, 848, 2037
Eam1104I	CTCTTC	2 cut(s)	1279, 2074
Eam1105I	GACNNNNNGTC	1 cut(s)	354
EarI	CTCTTC	2 cut(s)	1279, 2074
Ecl136II	GAGCTC	2 cut(s)	81, 472
Eco130I	CCWWGG	2 cut(s)	974, 1565
Eco24I	GRGCYC	3 cut(s)	83, 474, 1142
Eco32I	GATATC	1 cut(s)	490
Eco47I	GGWCC	1 cut(s)	1787
Eco53kI	GAGCTC	2 cut(s)	81, 472
Eco57I	CTGAAG	3 cut(s)	32, 917, 1641
Eco81I	CCTNAGG	1 cut(s)	1750
Eco88I	CYCGRG	2 cut(s)	69, 473
EcoICRI	GAGCTC	2 cut(s)	81, 472
EcoO109I	RGGNCCY	1 cut(s)	1787
EcoRII	CCWGG	3 cut(s)	230, 1771, 2112
EcoRV	GATATC	1 cut(s)	490
EcoT14I	CCWWGG	2 cut(s)	974, 1565
EcoT22I	ATGCAT	2 cut(s)	1304, 1630
EcoT38I	GRGCYC	3 cut(s)	83, 474, 1142
EgeI	GGCGCC	1 cut(s)	301
EheI	GGCGCC	1 cut(s)	301
ErhI	CCWWGG	2 cut(s)	974, 1565
Esp3I	CGTCTC	1 cut(s)	68
FalI	AAGNNNNNCTT	4 cut(s)	30, 62, 2053, 2085
FaqI	GGGAC	2 cut(s)	964, 1034
FauI	CCCGC	1 cut(s)	327
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	2 cut(s)	347, 1991
Fnu4HI	GCNGC	2 cut(s)	330, 755
FokI	GGATG	2 cut(s)	1091, 2129
FriOI	GRGCYC	3 cut(s)	83, 474, 1142
Fsp4HI	GCNGC	2 cut(s)	330, 755
FspAI	RTGCGCAY	1 cut(s)	576
FspBI	CTAG	2 cut(s)	975, 1179
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	7 cut(s)	301, 333, 419, 502, 576, 768, 1344
GluI	GCNGC	2 cut(s)	330, 755
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	5 cut(s)	159, 636, 850, 1999, 2039
HapII	CCGG	6 cut(s)	114, 303, 726, 1053, 1382, 1579
HgaI	GACGC	1 cut(s)	1309
HhaI	GCGC	7 cut(s)	302, 334, 420, 503, 577, 769, 1345
Hin1I	GRCGYC	1 cut(s)	300
Hin6I	GCGC	7 cut(s)	300, 332, 418, 501, 575, 767, 1343
HinP1I	GCGC	7 cut(s)	300, 332, 418, 501, 575, 767, 1343
HincII	GTYRAC	5 cut(s)	103, 348, 997, 1485, 1516
HindII	GTYRAC	5 cut(s)	103, 348, 997, 1485, 1516
HindIII	AAGCTT	4 cut(s)	665, 1659, 2030, 2085
HpaI	GTTAAC	1 cut(s)	1485
HpaII	CCGG	6 cut(s)	114, 303, 726, 1053, 1382, 1579
HphI	GGTGA	8 cut(s)	34, 58, 103, 376, 406, 557, 1775, 1972
Hpy166II	GTNNAC	9 cut(s)	103, 348, 997, 1072, 1485, 1516, 1741, 1766, 1992
Hpy188I	TCNGA	9 cut(s)	98, 124, 466, 535, 723, 811, 1506, 1621, 1972
Hpy188III	TCNNGA	8 cut(s)	290, 602, 671, 820, 944, 1135, 1149, 1585
Hpy8I	GTNNAC	9 cut(s)	103, 348, 997, 1072, 1485, 1516, 1741, 1766, 1992
Hpy99I	CGWCG	3 cut(s)	143, 352, 1701
HpyAV	CCTTC	9 cut(s)	56, 149, 395, 403, 542, 570, 826, 941, 1712
HpyCH4III	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1852, 1918
HpyF10VI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1567, 1600, 2064
HpyF3I	CTNAG	4 cut(s)	870, 1441, 1750, 1835
Hsp92I	GRCGYC	1 cut(s)	300
HspAI	GCGC	7 cut(s)	300, 332, 418, 501, 575, 767, 1343
KasI	GGCGCC	1 cut(s)	299
Ksp22I	TGATCA	1 cut(s)	450
KspAI	GTTAAC	1 cut(s)	1485
Kzo9I	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
LguI	GCTCTTC	1 cut(s)	2074
LmnI	GCTCC	3 cut(s)	86, 99, 1777
Lsp1109I	GCAGC	2 cut(s)	316, 766
LweI	GCATC	3 cut(s)	1128, 1354, 1615
MaeI	CTAG	2 cut(s)	975, 1179
MaeIII	GTNAC	6 cut(s)	40, 268, 364, 1004, 1019, 1275
MalI	GATC	9 cut(s)	131, 452, 824, 942, 1188, 1293, 1449, 1683, 1715
MbiI	CCGCTC	1 cut(s)	1594
MboI	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
MboII	GAAGA	7 cut(s)	418, 1094, 1296, 1315, 1483, 1634, 2061
MflI	RGATCY	2 cut(s)	822, 1186
MhlI	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1977
MlsI	TGGCCA	2 cut(s)	636, 2039
MluCI	AATT	9 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1435, 1910
MluNI	TGGCCA	2 cut(s)	636, 2039
Mly113I	GGCGCC	1 cut(s)	300
MlyI	GAGTC	6 cut(s)	108, 218, 386, 607, 865, 1012
MmeI	TCCRAC	3 cut(s)	192, 746, 789
Mox20I	TGGCCA	2 cut(s)	636, 2039
Mph1103I	ATGCAT	2 cut(s)	1304, 1630
MscI	TGGCCA	2 cut(s)	636, 2039
MseI	TTAA	9 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1706, 1827
MslI	CAYNNNNRTG	3 cut(s)	576, 658, 777
Msp20I	TGGCCA	2 cut(s)	636, 2039
MspCI	CTTAAG	1 cut(s)	1705
MspI	CCGG	6 cut(s)	114, 303, 726, 1053, 1382, 1579
MspR9I	CCNGG	6 cut(s)	232, 727, 1053, 1383, 1773, 2114
MvaI	CCWGG	3 cut(s)	232, 1773, 2114
MvnI	CGCG	3 cut(s)	334, 501, 681
MwoI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1567, 1600, 2064
NarI	GGCGCC	1 cut(s)	300
NciI	CCSGG	3 cut(s)	727, 1053, 1383
NcoI	CCATGG	1 cut(s)	1565
NdeII	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
NlaIV	GGNNCC	4 cut(s)	301, 612, 813, 1788
NmuCI	GTSAC	4 cut(s)	40, 364, 1004, 1019
NsbI	TGCGCA	1 cut(s)	576
NsiI	ATGCAT	2 cut(s)	1304, 1630
NspI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
NspV	TTCGAA	1 cut(s)	842
PaeI	GCATGC	1 cut(s)	1100
PaeR7I	CTCGAG	1 cut(s)	473
PciI	ACATGT	3 cut(s)	353, 582, 1363
PciSI	GCTCTTC	1 cut(s)	2074
PcsI	WCGNNNNNNNCGW	3 cut(s)	67, 138, 144
PfeI	GAWTC	4 cut(s)	530, 709, 1607, 1967
PflFI	GACNNNGTC	1 cut(s)	1319
PflMI	CCANNNNNTGG	2 cut(s)	1892, 2105
PkrI	GCNGC	2 cut(s)	331, 756
PleI	GAGTC	6 cut(s)	107, 218, 385, 606, 864, 1011
PluTI	GGCGCC	1 cut(s)	303
PpsI	GAGTC	6 cut(s)	107, 218, 385, 606, 864, 1011
PpuMI	RGGWCCY	1 cut(s)	1787
PscI	ACATGT	3 cut(s)	353, 582, 1363
PsiI	TTATAA	1 cut(s)	1880
Psp124BI	GAGCTC	2 cut(s)	83, 474
Psp5II	RGGWCCY	1 cut(s)	1787
Psp6I	CCWGG	3 cut(s)	230, 1771, 2112
PspGI	CCWGG	3 cut(s)	230, 1771, 2112
PspN4I	GGNNCC	4 cut(s)	301, 612, 813, 1788
PspPI	GGNCC	3 cut(s)	158, 1787, 1997
PspPPI	RGGWCCY	1 cut(s)	1787
PspXI	VCTCGAGB	1 cut(s)	473
PsrI	GAACNNNNNNTAC	2 cut(s)	227, 259
PstI	CTGCAG	1 cut(s)	2077
PsuI	RGATCY	2 cut(s)	822, 1186
PsyI	GACNNNGTC	1 cut(s)	1319
RsaI	GTAC	1 cut(s)	206
RsaNI	GTAC	1 cut(s)	205
RseI	CAYNNNNRTG	3 cut(s)	576, 658, 777
SacI	GAGCTC	2 cut(s)	83, 474
SalI	GTCGAC	1 cut(s)	346
SapI	GCTCTTC	1 cut(s)	2074
SaqAI	TTAA	9 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1706, 1827
SatI	GCNGC	2 cut(s)	330, 755
Sau3AI	GATC	9 cut(s)	129, 450, 822, 940, 1186, 1291, 1447, 1681, 1713
Sau96I	GGNCC	3 cut(s)	158, 1787, 1997
SchI	GAGTC	6 cut(s)	108, 218, 386, 607, 865, 1012
ScrFI	CCNGG	6 cut(s)	232, 727, 1053, 1383, 1773, 2114
SduI	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1977
SfaNI	GCATC	3 cut(s)	1128, 1354, 1615
SfcI	CTRYAG	3 cut(s)	783, 1992, 2073
SfoI	GGCGCC	1 cut(s)	301
Sfr274I	CTCGAG	1 cut(s)	473
SfuI	TTCGAA	1 cut(s)	842
SinI	GGWCC	1 cut(s)	1787
SlaI	CTCGAG	1 cut(s)	473
SmiMI	CAYNNNNRTG	3 cut(s)	576, 658, 777
SmlI	CTYRAG	4 cut(s)	473, 504, 1190, 1705
SmoI	CTYRAG	4 cut(s)	473, 504, 1190, 1705
SphI	GCATGC	1 cut(s)	1100
Sse9I	AATT	9 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1435, 1910
SsiI	CCGC	4 cut(s)	247, 334, 681, 1594
SspDI	GGCGCC	1 cut(s)	299
SspI	AATATT	2 cut(s)	1409, 1653
SspMI	CTAG	2 cut(s)	975, 1179
SstI	GAGCTC	2 cut(s)	83, 474
StyD4I	CCNGG	6 cut(s)	230, 725, 1051, 1381, 1771, 2112
StyI	CCWWGG	2 cut(s)	974, 1565
TaaI	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1852, 1918
TaqI	TCGA	9 cut(s)	138, 210, 320, 347, 474, 842, 901, 943, 1716
TasI	AATT	9 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1435, 1910
TfiI	GAWTC	4 cut(s)	530, 709, 1607, 1967
Tru1I	TTAA	9 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1706, 1827
Tru9I	TTAA	9 cut(s)	54, 750, 1175, 1257, 1328, 1464, 1484, 1706, 1827
TscAI	CASTG	7 cut(s)	973, 1040, 1240, 1432, 1449, 1820, 1843
TseFI	GTSAC	4 cut(s)	40, 364, 1004, 1019
TseI	GCWGC	2 cut(s)	329, 754
Tsp45I	GTSAC	4 cut(s)	40, 364, 1004, 1019
TspDTI	ATGAA	7 cut(s)	419, 761, 807, 896, 909, 1094, 1095
TspGWI	ACGGA	1 cut(s)	1057
TspRI	CASTG	7 cut(s)	973, 1040, 1240, 1432, 1449, 1820, 1843
Tth111I	GACNNNGTC	1 cut(s)	1319
Van91I	CCANNNNNTGG	2 cut(s)	1892, 2105
Vha464I	CTTAAG	1 cut(s)	1705
VpaK11BI	GGWCC	1 cut(s)	1787
XapI	RAATTY	3 cut(s)	830, 985, 1910
XceI	RCATGY	9 cut(s)	217, 357, 575, 586, 1100, 1367, 1561, 1761, 2129
XhoI	CTCGAG	1 cut(s)	473
XmaJI	CCTAGG	1 cut(s)	974
XmiI	GTMKAC	2 cut(s)	347, 1991
XspI	CTAG	2 cut(s)	975, 1179
Zsp2I	ATGCAT	2 cut(s)	1304, 1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.