Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014667.1

Orthogroup ID

OG0009412

Physical Location & Seq

Genomic Coordinates Forward (+)

10760 .. 14954

Gene Structure 4195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014667.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

atgctcaacgactctcccaggaacagagcttaccgccaagccatagacaagaccgtaactaaaccctgccgtgttcttgatattggcgccggaactgggttgctgtcgatgatggctgcgcgggcaatggggtcgacgacatgtcgtatggtgaaggcttgtgagtcttaccttccaatggtgaagctaatgaagaaggttctgcgcttgaacgacatggaaaagcagataaaactgatcaacaagcgttctgatgagctcgagttgggtgttgatatcaattctcgcgctcaagttgttgttagtgagatattggattcagagttgttgggtgaagggttgataccttctctgcaacatgcgcatgacatgttgttggtggagagtcctgaaacggtgccgtatagagcaaccacttatggccagttggttgagagcacatttttgtggaagcttcatgatttacgcggtaatgaggcagaagcgtgtgatgggattcgtcttgttcctaccgggtttgagaatgttttgggtgttaagccgcaacaatatgcgtttcattgtaatgctatagcaaatgaagtgaaattgctgtcggaacccttcaagatctttgaatttgatttttcgaaaaggccagagagtcgtggagaaactgagctatctataaaggcgactaatgatggtcgagttcatgctgtaatttcatggtggatacttcagcttgatcgagaagggacaatcttttattccactgcccctaggtggataaatttgccagtcaacatgagtcacggggattggtgtgaccattggaaacagtgtgtttggtttgtccctggtgaaggtatgtccgtaaacaaggatgaagaagtttgtttgcatgctgttcatacagatattagcatctcatacaatatcaagagccccatatcaagaaacaagagtatgcagtatgacttaactagcagggatctcaagctcatactaccaccagaaagaattgcaatttatggagacagtgaatggaggcatagcatgtttaatgcaataagtaatgcgttacagggaagagttgatccattatgcattgttgcagatgacagcgtcttcttaactctactggtggcgcatctttctaaaacatcacatgtgatgtcattctttccggggttgcaagacaagggtttgcaatatttgcaagctgtcgccaaacctttctactgtggaacagatagcatgcttccatggcagaacctccggttctggaatgagcggacaatgctggattctgttctatctgaagatgcattgataatgccttgtaaggcaatattgaaagcttgtgcattgtctatccctgatctttggaatagtcgtcgtagcttaagtaagatcgaagggtttgaccattctgttgtaaactccaccttaggggcatgtggtgaactacctggggagcaagagggtccttgtctgccctattttatttggcagtgtggaaatgttaagaaactcagtgaagcatttacggtcatggagtttgatttctcaaaacttataatgccatctcatggaaaaacccagattgaatttactgagccagggatatgccacgggtttgcagtatggattgattgggtgatggattcagagcactccattgtattgtctacagggccagataagaggtattggaagcaaggagtaaagcttctggccaagcctgtgggagttggcaaaagttgctcttctgcagtgattgaagcttcgtttgacccatcaagtggcgacctggatgttagacatgctttctcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019918 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035241 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PrmA

Protein Analysis

606

Amino Acids

68.02

Weight (kDa)

5.97

Isoelectric Point (pI)

47.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16570
fragaria_vesca	FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820
malus_domestica	MD04G1063800.v1.1
prunus_persica	Prupe.5G069000_v2.0.a1 Prupe.5G069000_v2.0.a1
pyrus_communis	pycom04g05760
rosa_chinensis	RchiOBHm_Chr7g0203171
rosa_laevigata	RLG00000003546
rosa_multiflora	Rmu_sc0005566.1_g000011 Rmu_sc0014667.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254020
rosa_rugosa	Rorug07G0074800
rosa_samantha	Rh7AG204000 Rh7BG203300 Rh7CG214900 Rh7DG210700
rosa_wichuraiana	Rw7G017780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1562
Acc16I	TGCGCA	1 cut(s)	363
AccB1I	GGYRCC	2 cut(s)	86, 397
AccB7I	CCANNNNNTGG	2 cut(s)	1574, 1787
AccBSI	CCGCTC	1 cut(s)	1276
AccI	GTMKAC	2 cut(s)	134, 1673
AccII	CGCG	3 cut(s)	121, 288, 468
AciI	CCGC	5 cut(s)	34, 121, 468, 542, 1276
AclWI	GGATC	2 cut(s)	981, 1073
AcoI	YGGCCR	2 cut(s)	421, 1719
AcsI	RAATTY	3 cut(s)	617, 772, 1592
AcuI	CTGAAG	2 cut(s)	704, 1323
AcyI	GRCGYC	1 cut(s)	87
AfiI	CCNNNNNNNGG	7 cut(s)	96, 178, 765, 845, 1434, 1574, 1787
AflII	CTTAAG	1 cut(s)	1387
AflIII	ACRYGT	3 cut(s)	140, 369, 1150
AgsI	TTSAA	6 cut(s)	211, 607, 617, 1339, 1592, 1766
AhdI	GACNNNNNGTC	1 cut(s)	141
AjnI	CCWGG	5 cut(s)	17, 838, 1453, 1603, 1794
Alw21I	GWGCWC	3 cut(s)	261, 440, 1659
Alw26I	GTCTC	1 cut(s)	1011
AlwI	GGATC	2 cut(s)	981, 1073
Ama87I	CYCGRG	1 cut(s)	260
AoxI	GGCC	4 cut(s)	421, 635, 1679, 1719
ApeKI	GCWGC	1 cut(s)	116
ApoI	RAATTY	3 cut(s)	617, 772, 1592
AspA2I	CCTAGG	1 cut(s)	761
AspLEI	GCGC	6 cut(s)	89, 121, 207, 290, 364, 1132
AspS9I	GGNCC	2 cut(s)	1469, 1679
AsuC2I	CCSGG	2 cut(s)	514, 1170
AsuHPI	GGTGA	6 cut(s)	163, 193, 344, 854, 1457, 1654
AsuII	TTCGAA	1 cut(s)	629
AvaI	CYCGRG	1 cut(s)	260
AvaII	GGWCC	1 cut(s)	1469
AvrII	CCTAGG	1 cut(s)	761
AxyI	CCTNAGG	1 cut(s)	1432
BalI	TGGCCA	2 cut(s)	423, 1721
BanI	GGYRCC	2 cut(s)	86, 397
BanII	GRGCYC	2 cut(s)	261, 929
BarI	GAAGNNNNNNTAC	2 cut(s)	327, 359
BbsI	GAAGAC	1 cut(s)	1102
Bbv12I	GWGCWC	3 cut(s)	261, 440, 1659
BbvI	GCAGC	1 cut(s)	103
BccI	CCATC	6 cut(s)	106, 485, 677, 1576, 1639, 1789
BceAI	ACGGC	2 cut(s)	54, 385
BcgI	CGANNNNNNTGC	2 cut(s)	114, 148
BciT130I	CCWGG	5 cut(s)	19, 840, 1455, 1605, 1796
BciVI	GTATCC	1 cut(s)	708
BclI	TGATCA	1 cut(s)	237
BcnI	CCSGG	2 cut(s)	514, 1170
BcoDI	GTCTC	1 cut(s)	1011
BfaI	CTAG	2 cut(s)	762, 966
BfmI	CTRYAG	3 cut(s)	570, 1674, 1755
BfoI	RGCGCY	1 cut(s)	90
BfrI	CTTAAG	1 cut(s)	1387
BfuI	GTATCC	1 cut(s)	708
BglII	AGATCT	1 cut(s)	609
BisI	GCNGC	2 cut(s)	117, 542
BlnI	CCTAGG	1 cut(s)	761
BlsI	GCNGC	2 cut(s)	118, 543
Bme1390I	CCNGG	7 cut(s)	19, 514, 840, 1170, 1455, 1605, 1796
Bme18I	GGWCC	1 cut(s)	1469
BmeRI	GACNNNNNGTC	1 cut(s)	141
BmeT110I	CYCGRG	1 cut(s)	260
BmgT120I	GGNCC	2 cut(s)	1469, 1679
BmiI	GGNNCC	4 cut(s)	88, 399, 600, 1470
BmrFI	CCNGG	7 cut(s)	19, 514, 840, 1170, 1455, 1605, 1796
BmrI	ACTGGG	1 cut(s)	105
BmsI	GCATC	3 cut(s)	915, 1141, 1297
BmuI	ACTGGG	1 cut(s)	105
BpiI	GAAGAC	1 cut(s)	1102
Bpu14I	TTCGAA	1 cut(s)	629
BpuEI	CTTGAG	2 cut(s)	276, 962
BpuMI	CCSGG	2 cut(s)	514, 1170
BsaHI	GRCGYC	1 cut(s)	87
BsaJI	CCNNGG	8 cut(s)	17, 761, 838, 1169, 1247, 1454, 1604, 1615
BsaWI	WCCGGW	1 cut(s)	1260
Bsc4I	CCNNNNNNNGG	7 cut(s)	96, 178, 765, 845, 1434, 1574, 1787
Bse1I	ACTGG	4 cut(s)	100, 424, 779, 1128
Bse21I	CCTNAGG	1 cut(s)	1432
Bse3DI	GCAATG	1 cut(s)	132
BseBI	CCWGG	5 cut(s)	19, 840, 1455, 1605, 1796
BseDI	CCNNGG	8 cut(s)	17, 761, 838, 1169, 1247, 1454, 1604, 1615
BseGI	GGATG	2 cut(s)	871, 1804
BseLI	CCNNNNNNNGG	7 cut(s)	96, 178, 765, 845, 1434, 1574, 1787
BseMI	GCAATG	1 cut(s)	132
BseMII	CTCAG	3 cut(s)	648, 1531, 1590
BseNI	ACTGG	4 cut(s)	100, 424, 779, 1128
BseXI	GCAGC	1 cut(s)	103
Bsh1236I	CGCG	3 cut(s)	121, 288, 468
BshFI	GGCC	4 cut(s)	423, 637, 1681, 1721
BshNI	GGYRCC	2 cut(s)	86, 397
BsiHKAI	GWGCWC	3 cut(s)	261, 440, 1659
BsiHKCI	CYCGRG	1 cut(s)	260
BsiSI	CCGG	4 cut(s)	90, 513, 1169, 1261
BslFI	GGGAC	2 cut(s)	751, 821
BslI	CCNNNNNNNGG	7 cut(s)	96, 178, 765, 845, 1434, 1574, 1787
BsmAI	GTCTC	1 cut(s)	1011
BsmFI	GGGAC	2 cut(s)	751, 821
BsnI	GGCC	4 cut(s)	423, 637, 1681, 1721
BsoBI	CYCGRG	1 cut(s)	260
Bsp119I	TTCGAA	1 cut(s)	629
Bsp1286I	GDGCHC	4 cut(s)	261, 440, 929, 1659
Bsp143I	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
Bsp19I	CCATGG	1 cut(s)	1247
BspACI	CCGC	5 cut(s)	34, 121, 468, 542, 1276
BspANI	GGCC	4 cut(s)	423, 637, 1681, 1721
BspCNI	CTCAG	3 cut(s)	649, 1530, 1591
BspFNI	CGCG	3 cut(s)	121, 288, 468
BspHI	TCATGA	1 cut(s)	457
BspLI	GGNNCC	4 cut(s)	88, 399, 600, 1470
BspMAI	CTGCAG	1 cut(s)	1759
BspPI	GGATC	2 cut(s)	981, 1073
BspQI	GCTCTTC	1 cut(s)	1756
BspT104I	TTCGAA	1 cut(s)	629
BspT107I	GGYRCC	2 cut(s)	86, 397
BspTI	CTTAAG	1 cut(s)	1387
BsrBI	CCGCTC	1 cut(s)	1276
BsrDI	GCAATG	1 cut(s)	132
BsrI	ACTGG	4 cut(s)	100, 424, 779, 1128
BssECI	CCNNGG	8 cut(s)	17, 761, 838, 1169, 1247, 1454, 1604, 1615
BssMI	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	2 cut(s)	761, 1247
Bst2UI	CCWGG	5 cut(s)	19, 840, 1455, 1605, 1796
Bst4CI	ACNGT	6 cut(s)	55, 397, 822, 1022, 1226, 1534
Bst6I	CTCTTC	2 cut(s)	1066, 1756
BstACI	GRCGYC	1 cut(s)	87
BstAFI	CTTAAG	1 cut(s)	1387
BstAPI	GCANNNNNTGC	2 cut(s)	1198, 1746
BstBI	TTCGAA	1 cut(s)	629
BstC8I	GCNNGC	4 cut(s)	123, 885, 1203, 1241
BstDEI	CTNAG	4 cut(s)	657, 1432, 1517, 1599
BstDSI	CCRYGG	2 cut(s)	1247, 1615
BstENI	CCTNNNNNAGG	1 cut(s)	843
BstF5I	GGATG	2 cut(s)	871, 1804
BstFNI	CGCG	3 cut(s)	121, 288, 468
BstH2I	RGCGCY	1 cut(s)	90
BstHHI	GCGC	6 cut(s)	89, 121, 207, 290, 364, 1132
BstKTI	GATC	7 cut(s)	240, 612, 730, 976, 1081, 1366, 1398
BstMAI	GTCTC	1 cut(s)	1011
BstMBI	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 361, 1198, 1249, 1282, 1746
BstNI	CCWGG	5 cut(s)	19, 840, 1455, 1605, 1796
BstNSI	RCATGY	9 cut(s)	144, 362, 373, 887, 1042, 1154, 1243, 1443, 1811
BstSCI	CCNGG	7 cut(s)	17, 512, 838, 1168, 1453, 1603, 1794
BstSFI	CTRYAG	3 cut(s)	570, 1674, 1755
BstUI	CGCG	3 cut(s)	121, 288, 468
BstV1I	GCAGC	1 cut(s)	103
BstV2I	GAAGAC	1 cut(s)	1102
BstX2I	RGATCY	2 cut(s)	609, 973
BstXI	CCANNNNNNTGG	1 cut(s)	1729
BstYI	RGATCY	2 cut(s)	609, 973
Bsu36I	CCTNAGG	1 cut(s)	1432
BsuI	GTATCC	1 cut(s)	708
BsuRI	GGCC	4 cut(s)	423, 637, 1681, 1721
BtgI	CCRYGG	2 cut(s)	1247, 1615
BtsCI	GGATG	2 cut(s)	871, 1804
BtsI	GCAGTG	3 cut(s)	753, 1502, 1764
BtsIMutI	CAGTG	6 cut(s)	753, 827, 1027, 1502, 1525, 1764
Cac8I	GCNNGC	4 cut(s)	123, 885, 1203, 1241
CciI	TCATGA	1 cut(s)	457
CfoI	GCGC	6 cut(s)	89, 121, 207, 290, 364, 1132
Cfr13I	GGNCC	2 cut(s)	1469, 1679
CseI	GACGC	1 cut(s)	1096
DdeI	CTNAG	4 cut(s)	657, 1432, 1517, 1599
DinI	GGCGCC	1 cut(s)	88
DpnI	GATC	7 cut(s)	239, 611, 729, 975, 1080, 1365, 1397
DpnII	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
DriI	GACNNNNNGTC	1 cut(s)	141
EaeI	YGGCCR	2 cut(s)	421, 1719
Eam1104I	CTCTTC	2 cut(s)	1066, 1756
Eam1105I	GACNNNNNGTC	1 cut(s)	141
EarI	CTCTTC	2 cut(s)	1066, 1756
Ecl136II	GAGCTC	1 cut(s)	259
Eco130I	CCWWGG	2 cut(s)	761, 1247
Eco24I	GRGCYC	2 cut(s)	261, 929
Eco32I	GATATC	1 cut(s)	277
Eco47I	GGWCC	1 cut(s)	1469
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	2 cut(s)	704, 1323
Eco81I	CCTNAGG	1 cut(s)	1432
Eco88I	CYCGRG	1 cut(s)	260
EcoICRI	GAGCTC	1 cut(s)	259
EcoNI	CCTNNNNNAGG	1 cut(s)	843
EcoO109I	RGGNCCY	1 cut(s)	1469
EcoRII	CCWGG	5 cut(s)	17, 838, 1453, 1603, 1794
EcoRV	GATATC	1 cut(s)	277
EcoT14I	CCWWGG	2 cut(s)	761, 1247
EcoT22I	ATGCAT	2 cut(s)	1091, 1312
EcoT38I	GRGCYC	2 cut(s)	261, 929
EgeI	GGCGCC	1 cut(s)	88
EheI	GGCGCC	1 cut(s)	88
ErhI	CCWWGG	2 cut(s)	761, 1247
FalI	AAGNNNNNCTT	2 cut(s)	1735, 1767
FaqI	GGGAC	2 cut(s)	751, 821
FauI	CCCGC	1 cut(s)	114
FbaI	TGATCA	1 cut(s)	237
FblI	GTMKAC	2 cut(s)	134, 1673
Fnu4HI	GCNGC	2 cut(s)	117, 542
FokI	GGATG	2 cut(s)	878, 1811
FriOI	GRGCYC	2 cut(s)	261, 929
Fsp4HI	GCNGC	2 cut(s)	117, 542
FspAI	RTGCGCAY	1 cut(s)	363
FspBI	CTAG	2 cut(s)	762, 966
FspI	TGCGCA	1 cut(s)	363
GlaI	GCGC	6 cut(s)	88, 120, 206, 289, 363, 1131
GluI	GCNGC	2 cut(s)	117, 542
HaeII	RGCGCY	1 cut(s)	90
HaeIII	GGCC	4 cut(s)	423, 637, 1681, 1721
HapII	CCGG	4 cut(s)	90, 513, 1169, 1261
HgaI	GACGC	1 cut(s)	1096
HhaI	GCGC	6 cut(s)	89, 121, 207, 290, 364, 1132
Hin1I	GRCGYC	1 cut(s)	87
Hin6I	GCGC	6 cut(s)	87, 119, 205, 288, 362, 1130
HinP1I	GCGC	6 cut(s)	87, 119, 205, 288, 362, 1130
HincII	GTYRAC	2 cut(s)	135, 784
HindII	GTYRAC	2 cut(s)	135, 784
HindIII	AAGCTT	4 cut(s)	452, 1341, 1712, 1767
HinfI	GANTC	9 cut(s)	11, 164, 317, 385, 496, 643, 790, 1289, 1649
HpaII	CCGG	4 cut(s)	90, 513, 1169, 1261
HphI	GGTGA	6 cut(s)	163, 193, 344, 854, 1457, 1654
Hpy166II	GTNNAC	6 cut(s)	135, 784, 859, 1423, 1448, 1674
Hpy188I	TCNGA	5 cut(s)	253, 322, 598, 1303, 1654
Hpy188III	TCNNGA	8 cut(s)	77, 389, 458, 607, 731, 922, 936, 1267
Hpy8I	GTNNAC	6 cut(s)	135, 784, 859, 1423, 1448, 1674
Hpy99I	CGWCG	2 cut(s)	139, 1383
HpyAV	CCTTC	9 cut(s)	148, 182, 190, 329, 357, 613, 728, 839, 1394
HpyCH4III	ACNGT	6 cut(s)	55, 397, 822, 1022, 1226, 1534
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 361, 1198, 1249, 1282, 1746
HpyF3I	CTNAG	4 cut(s)	657, 1432, 1517, 1599
Hsp92I	GRCGYC	1 cut(s)	87
HspAI	GCGC	6 cut(s)	87, 119, 205, 288, 362, 1130
KasI	GGCGCC	1 cut(s)	86
Ksp22I	TGATCA	1 cut(s)	237
Kzo9I	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
LguI	GCTCTTC	1 cut(s)	1756
LmnI	GCTCC	1 cut(s)	1459
Lsp1109I	GCAGC	1 cut(s)	103
LweI	GCATC	3 cut(s)	915, 1141, 1297
MaeI	CTAG	2 cut(s)	762, 966
MaeIII	GTNAC	4 cut(s)	55, 791, 806, 1062
MalI	GATC	7 cut(s)	239, 611, 729, 975, 1080, 1365, 1397
MbiI	CCGCTC	1 cut(s)	1276
MboI	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
MboII	GAAGA	6 cut(s)	205, 881, 1083, 1102, 1316, 1743
MflI	RGATCY	2 cut(s)	609, 973
MhlI	GDGCHC	4 cut(s)	261, 440, 929, 1659
MlsI	TGGCCA	2 cut(s)	423, 1721
MluCI	AATT	8 cut(s)	280, 587, 617, 702, 772, 1002, 1008, 1592
MluNI	TGGCCA	2 cut(s)	423, 1721
Mly113I	GGCGCC	1 cut(s)	87
MlyI	GAGTC	5 cut(s)	5, 173, 394, 652, 799
MmeI	TCCRAC	1 cut(s)	576
MnlI	CCTC	5 cut(s)	469, 1023, 1268, 1459, 1683
Mox20I	TGGCCA	2 cut(s)	423, 1721
Mph1103I	ATGCAT	2 cut(s)	1091, 1312
MscI	TGGCCA	2 cut(s)	423, 1721
MseI	TTAA	6 cut(s)	537, 962, 1044, 1115, 1388, 1509
MslI	CAYNNNNRTG	3 cut(s)	363, 445, 564
Msp20I	TGGCCA	2 cut(s)	423, 1721
MspCI	CTTAAG	1 cut(s)	1387
MspI	CCGG	4 cut(s)	90, 513, 1169, 1261
MspR9I	CCNGG	7 cut(s)	19, 514, 840, 1170, 1455, 1605, 1796
MvaI	CCWGG	5 cut(s)	19, 840, 1455, 1605, 1796
MvnI	CGCG	3 cut(s)	121, 288, 468
MwoI	GCNNNNNNNGC	6 cut(s)	122, 361, 1198, 1249, 1282, 1746
NarI	GGCGCC	1 cut(s)	87
NciI	CCSGG	2 cut(s)	514, 1170
NcoI	CCATGG	1 cut(s)	1247
NdeII	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
NlaIV	GGNNCC	4 cut(s)	88, 399, 600, 1470
NmuCI	GTSAC	2 cut(s)	791, 806
NsbI	TGCGCA	1 cut(s)	363
NsiI	ATGCAT	2 cut(s)	1091, 1312
NspI	RCATGY	9 cut(s)	144, 362, 373, 887, 1042, 1154, 1243, 1443, 1811
NspV	TTCGAA	1 cut(s)	629
PaeI	GCATGC	2 cut(s)	887, 1243
PaeR7I	CTCGAG	1 cut(s)	260
PagI	TCATGA	1 cut(s)	457
PciI	ACATGT	3 cut(s)	140, 369, 1150
PciSI	GCTCTTC	1 cut(s)	1756
PfeI	GAWTC	4 cut(s)	317, 496, 1289, 1649
PflFI	GACNNNGTC	1 cut(s)	1106
PflMI	CCANNNNNTGG	2 cut(s)	1574, 1787
PkrI	GCNGC	2 cut(s)	118, 543
PleI	GAGTC	5 cut(s)	5, 172, 393, 651, 798
PluTI	GGCGCC	1 cut(s)	90
PpsI	GAGTC	5 cut(s)	5, 172, 393, 651, 798
PpuMI	RGGWCCY	1 cut(s)	1469
PscI	ACATGT	3 cut(s)	140, 369, 1150
PsiI	TTATAA	1 cut(s)	1562
Psp124BI	GAGCTC	1 cut(s)	261
Psp5II	RGGWCCY	1 cut(s)	1469
Psp6I	CCWGG	5 cut(s)	17, 838, 1453, 1603, 1794
PspGI	CCWGG	5 cut(s)	17, 838, 1453, 1603, 1794
PspN4I	GGNNCC	4 cut(s)	88, 399, 600, 1470
PspPI	GGNCC	2 cut(s)	1469, 1679
PspPPI	RGGWCCY	1 cut(s)	1469
PspXI	VCTCGAGB	1 cut(s)	260
PsrI	GAACNNNNNNTAC	2 cut(s)	14, 46
PstI	CTGCAG	1 cut(s)	1759
PsuI	RGATCY	2 cut(s)	609, 973
PsyI	GACNNNGTC	1 cut(s)	1106
RseI	CAYNNNNRTG	3 cut(s)	363, 445, 564
SacI	GAGCTC	1 cut(s)	261
SalI	GTCGAC	1 cut(s)	133
SapI	GCTCTTC	1 cut(s)	1756
SaqAI	TTAA	6 cut(s)	537, 962, 1044, 1115, 1388, 1509
SatI	GCNGC	2 cut(s)	117, 542
Sau3AI	GATC	7 cut(s)	237, 609, 727, 973, 1078, 1363, 1395
Sau96I	GGNCC	2 cut(s)	1469, 1679
SchI	GAGTC	5 cut(s)	5, 173, 394, 652, 799
ScrFI	CCNGG	7 cut(s)	19, 514, 840, 1170, 1455, 1605, 1796
SduI	GDGCHC	4 cut(s)	261, 440, 929, 1659
SfaNI	GCATC	3 cut(s)	915, 1141, 1297
SfcI	CTRYAG	3 cut(s)	570, 1674, 1755
SfoI	GGCGCC	1 cut(s)	88
Sfr274I	CTCGAG	1 cut(s)	260
SfuI	TTCGAA	1 cut(s)	629
SinI	GGWCC	1 cut(s)	1469
SlaI	CTCGAG	1 cut(s)	260
SmiMI	CAYNNNNRTG	3 cut(s)	363, 445, 564
SmlI	CTYRAG	4 cut(s)	260, 291, 977, 1387
SmoI	CTYRAG	4 cut(s)	260, 291, 977, 1387
SphI	GCATGC	2 cut(s)	887, 1243
Sse9I	AATT	8 cut(s)	280, 587, 617, 702, 772, 1002, 1008, 1592
SsiI	CCGC	5 cut(s)	34, 121, 468, 542, 1276
SspDI	GGCGCC	1 cut(s)	86
SspI	AATATT	2 cut(s)	1196, 1335
SspMI	CTAG	2 cut(s)	762, 966
SstI	GAGCTC	1 cut(s)	261
StyD4I	CCNGG	7 cut(s)	17, 512, 838, 1168, 1453, 1603, 1794
StyI	CCWWGG	2 cut(s)	761, 1247
TaaI	ACNGT	6 cut(s)	55, 397, 822, 1022, 1226, 1534
TaqI	TCGA	7 cut(s)	107, 134, 261, 629, 688, 730, 1398
TasI	AATT	8 cut(s)	280, 587, 617, 702, 772, 1002, 1008, 1592
TauI	GCSGC	1 cut(s)	544
TfiI	GAWTC	4 cut(s)	317, 496, 1289, 1649
Tru1I	TTAA	6 cut(s)	537, 962, 1044, 1115, 1388, 1509
Tru9I	TTAA	6 cut(s)	537, 962, 1044, 1115, 1388, 1509
TscAI	CASTG	6 cut(s)	760, 827, 1027, 1502, 1525, 1764
TseFI	GTSAC	2 cut(s)	791, 806
TseI	GCWGC	1 cut(s)	116
Tsp45I	GTSAC	2 cut(s)	791, 806
TspDTI	ATGAA	8 cut(s)	206, 446, 548, 594, 683, 696, 881, 882
TspGWI	ACGGA	1 cut(s)	844
TspRI	CASTG	6 cut(s)	760, 827, 1027, 1502, 1525, 1764
Tth111I	GACNNNGTC	1 cut(s)	1106
Van91I	CCANNNNNTGG	2 cut(s)	1574, 1787
Vha464I	CTTAAG	1 cut(s)	1387
VpaK11BI	GGWCC	1 cut(s)	1469
XagI	CCTNNNNNAGG	1 cut(s)	843
XapI	RAATTY	3 cut(s)	617, 772, 1592
XceI	RCATGY	9 cut(s)	144, 362, 373, 887, 1042, 1154, 1243, 1443, 1811
XhoI	CTCGAG	1 cut(s)	260
XmaJI	CCTAGG	1 cut(s)	761
XmiI	GTMKAC	2 cut(s)	134, 1673
XspI	CTAG	2 cut(s)	762, 966
Zsp2I	ATGCAT	2 cut(s)	1091, 1312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.