Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005566.1

Orthogroup ID

OG0009412

Physical Location & Seq

Genomic Coordinates Reverse (-)

36466 .. 40747

Gene Structure 4282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005566.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

atgtttcataggaacttgctaccattgttgtcaaaacaagttacccttcaccttaaacctcgtctcacccgagcaatgagctcccagttccagctccgagtcaacccactcaccggcaactcggagtggatcgtcatcgacgagaacgaaccagaaggcccatcttccaacacttcccaaaatgccctcctcgccacaacctcgtacctcgacatgctcaacgactctcccaggaacagagcttaccgccaagccatagacaagaccgtaactaaaccctgccgtgttcttgatattggcgccggaactgggttgctgtcgatgatggctgcgcgggcaatggggtcgacgacatgtcgtatggtgacggcttgtgagtcttaccttccaatggtgaagctaatgaagaaggttctgcgcttgaacgacatggaaaagcagataaaactgatcaacaagcgttctgatgagctcgagttgggtgttgatatcaattctcgcgctcaagttgttgttagtgagatattggattcagagttgttgggtgaagggttgataccttctctgcaacatgcgcatgacatgttgttggtggagagtcctgaaacggtgccgtatagagcaaccacttatggccagttggttgagagcacatttttgtggaagcttcatgatttacgcggtaatgaggcagaagcgtgtgatgggattcgtcttgttcctaccgggtttgagaatgttttgggtgttaagccgcaacaatatgcgtttcattgtaatgctatagcaaatgaagtgaaattgctgtcggaacccttcaagatctttgaatttgatttttcgaaaaggccagagagtcgtggagaaactgagctatctataaaggcgactaatgatggtcgagttcatgctgtaatttcatggtggatacttcagcttgatcgagaagggacaatcttttattccactgcccctaggtggataaatttgccagtcaacatgagtcacggggattggtgtgaccattggaaacagtgtgtttggtttgtccctggtgaaggtatgtccgtaaacaaggatgaagaagtttgtttgcatgctgttcatacagatattagcatctcatacaatatcaagagccccatatcaagaaacaagagtatgcagtatgacttaactagcagggatctcaagctcatactaccaccagaaagaattgcaatttatggagacagtgaatggaggcatagcatgtttaatgcaataagtaatgcgttacagggaagagttgatccattatgcattgttgcagatgacagcgtcttcttaactctactggtggcgcatctttctaaaacatcacatgtgatgtcattctttccggggttgcaagacaagggtttgcaatatttgcaagctgtcgccaaacctttctactgtggaacagatagcatgcttccatggcagaacctccggttctggaatgagcggacaatgctggattctgttctatctgaagatgcattgataatgccttgtaaggcaatattgaaagcttgtgcattgtctatccctgatctttggaatagtcgtcgtagcttaagtaagatcgaagggtttgaccattctgttgtaaactccaccttaggggcatgtggtgaactacctggggagcaagagggtccttgtctgccctattttatttggcagtgtggaaatgttaagaaactcagtgaagcatttacggtcatggagtttgatttctcaaaacttataatgccatctcatggaaaaacccagattgaatttactgagccagggatatgccacgggtttgcagtatggattgattgggtgatggattcagagcactccattgtattgtctacagggccagataagaggtattggaagcaaggagtaaagcttctggccaagcctgtgggagttggcaaaagttgctcttctgcagtgattgaagcttcgtttgacccatcaagtggcgacctggatgttagacatgctttctcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019918 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035241 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PrmA

Protein Analysis

677

Amino Acids

76.0

Weight (kDa)

5.98

Isoelectric Point (pI)

46.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16570
fragaria_vesca	FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820 FvH4_5g18820
malus_domestica	MD04G1063800.v1.1
prunus_persica	Prupe.5G069000_v2.0.a1 Prupe.5G069000_v2.0.a1
pyrus_communis	pycom04g05760
rosa_chinensis	RchiOBHm_Chr7g0203171
rosa_laevigata	RLG00000003546
rosa_multiflora	Rmu_sc0005566.1_g000011 Rmu_sc0014667.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254020
rosa_rugosa	Rorug07G0074800
rosa_samantha	Rh7AG204000 Rh7BG203300 Rh7CG214900 Rh7DG210700
rosa_wichuraiana	Rw7G017780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1775
Acc16I	TGCGCA	1 cut(s)	576
AccB1I	GGYRCC	2 cut(s)	299, 610
AccB7I	CCANNNNNTGG	2 cut(s)	1787, 2000
AccBSI	CCGCTC	1 cut(s)	1489
AccI	GTMKAC	2 cut(s)	347, 1886
AccII	CGCG	3 cut(s)	334, 501, 681
AciI	CCGC	5 cut(s)	247, 334, 681, 755, 1489
AclWI	GGATC	3 cut(s)	137, 1194, 1286
AcoI	YGGCCR	2 cut(s)	634, 1932
AcsI	RAATTY	3 cut(s)	830, 985, 1805
AcuI	CTGAAG	2 cut(s)	917, 1536
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	1 cut(s)	206
AfiI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1647, 1787, 2000
AflII	CTTAAG	1 cut(s)	1600
AflIII	ACRYGT	3 cut(s)	353, 582, 1363
AgsI	TTSAA	6 cut(s)	424, 820, 830, 1552, 1805, 1979
AhdI	GACNNNNNGTC	1 cut(s)	354
AjnI	CCWGG	5 cut(s)	230, 1051, 1666, 1816, 2007
Alw21I	GWGCWC	4 cut(s)	83, 474, 653, 1872
Alw26I	GTCTC	2 cut(s)	68, 1224
AlwI	GGATC	3 cut(s)	137, 1194, 1286
Ama87I	CYCGRG	2 cut(s)	69, 473
AoxI	GGCC	5 cut(s)	157, 634, 848, 1892, 1932
ApeKI	GCWGC	1 cut(s)	329
ApoI	RAATTY	3 cut(s)	830, 985, 1805
AspA2I	CCTAGG	1 cut(s)	974
AspLEI	GCGC	6 cut(s)	302, 334, 420, 503, 577, 1345
AspS9I	GGNCC	3 cut(s)	158, 1682, 1892
AsuC2I	CCSGG	2 cut(s)	727, 1383
AsuHPI	GGTGA	9 cut(s)	41, 58, 103, 376, 406, 557, 1067, 1670, 1867
AsuII	TTCGAA	1 cut(s)	842
AvaI	CYCGRG	2 cut(s)	69, 473
AvaII	GGWCC	1 cut(s)	1682
AvrII	CCTAGG	1 cut(s)	974
AxyI	CCTNAGG	1 cut(s)	1645
BalI	TGGCCA	2 cut(s)	636, 1934
BanI	GGYRCC	2 cut(s)	299, 610
BanII	GRGCYC	3 cut(s)	83, 474, 1142
BarI	GAAGNNNNNNTAC	2 cut(s)	540, 572
BbsI	GAAGAC	1 cut(s)	1315
Bbv12I	GWGCWC	4 cut(s)	83, 474, 653, 1872
BbvI	GCAGC	1 cut(s)	316
BccI	CCATC	7 cut(s)	169, 319, 698, 890, 1789, 1852, 2002
BceAI	ACGGC	3 cut(s)	267, 384, 598
BcgI	CGANNNNNNTGC	2 cut(s)	327, 361
BciT130I	CCWGG	5 cut(s)	232, 1053, 1668, 1818, 2009
BciVI	GTATCC	1 cut(s)	921
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	2 cut(s)	727, 1383
BcoDI	GTCTC	2 cut(s)	68, 1224
BfaI	CTAG	2 cut(s)	975, 1179
BfmI	CTRYAG	3 cut(s)	783, 1887, 1968
BfoI	RGCGCY	1 cut(s)	303
BfrI	CTTAAG	1 cut(s)	1600
BfuI	GTATCC	1 cut(s)	921
BglII	AGATCT	1 cut(s)	822
BisI	GCNGC	2 cut(s)	330, 755
BlnI	CCTAGG	1 cut(s)	974
BlsI	GCNGC	2 cut(s)	331, 756
Bme1390I	CCNGG	7 cut(s)	232, 727, 1053, 1383, 1668, 1818, 2009
Bme18I	GGWCC	1 cut(s)	1682
BmeRI	GACNNNNNGTC	1 cut(s)	354
BmeT110I	CYCGRG	2 cut(s)	69, 473
BmgT120I	GGNCC	3 cut(s)	158, 1682, 1892
BmiI	GGNNCC	4 cut(s)	301, 612, 813, 1683
BmrFI	CCNGG	7 cut(s)	232, 727, 1053, 1383, 1668, 1818, 2009
BmrI	ACTGGG	2 cut(s)	79, 318
BmsI	GCATC	3 cut(s)	1128, 1354, 1510
BmuI	ACTGGG	2 cut(s)	79, 318
BpiI	GAAGAC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	842
BpuEI	CTTGAG	2 cut(s)	489, 1175
BpuMI	CCSGG	2 cut(s)	727, 1383
BsaBI	GATNNNNATC	1 cut(s)	134
BsaHI	GRCGYC	1 cut(s)	300
BsaJI	CCNNGG	8 cut(s)	230, 974, 1051, 1382, 1460, 1667, 1817, 1828
BsaWI	WCCGGW	1 cut(s)	1473
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1647, 1787, 2000
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	5 cut(s)	85, 313, 637, 992, 1341
Bse21I	CCTNAGG	1 cut(s)	1645
Bse3DI	GCAATG	2 cut(s)	81, 345
Bse8I	GATNNNNATC	1 cut(s)	134
BseBI	CCWGG	5 cut(s)	232, 1053, 1668, 1818, 2009
BseDI	CCNNGG	8 cut(s)	230, 974, 1051, 1382, 1460, 1667, 1817, 1828
BseGI	GGATG	2 cut(s)	1084, 2017
BseJI	GATNNNNATC	1 cut(s)	134
BseLI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1647, 1787, 2000
BseMI	GCAATG	2 cut(s)	81, 345
BseMII	CTCAG	3 cut(s)	861, 1744, 1803
BseNI	ACTGG	5 cut(s)	85, 313, 637, 992, 1341
BseRI	GAGGAG	1 cut(s)	179
BseXI	GCAGC	1 cut(s)	316
Bsh1236I	CGCG	3 cut(s)	334, 501, 681
BshFI	GGCC	5 cut(s)	159, 636, 850, 1894, 1934
BshNI	GGYRCC	2 cut(s)	299, 610
BsiHKAI	GWGCWC	4 cut(s)	83, 474, 653, 1872
BsiHKCI	CYCGRG	2 cut(s)	69, 473
BsiSI	CCGG	5 cut(s)	114, 303, 726, 1382, 1474
BslFI	GGGAC	2 cut(s)	964, 1034
BslI	CCNNNNNNNGG	8 cut(s)	113, 309, 391, 978, 1058, 1647, 1787, 2000
BsmAI	GTCTC	2 cut(s)	68, 1224
BsmBI	CGTCTC	1 cut(s)	68
BsmFI	GGGAC	2 cut(s)	964, 1034
BsnI	GGCC	5 cut(s)	159, 636, 850, 1894, 1934
BsoBI	CYCGRG	2 cut(s)	69, 473
Bsp119I	TTCGAA	1 cut(s)	842
Bsp1286I	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1872
Bsp143I	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
Bsp19I	CCATGG	1 cut(s)	1460
BspACI	CCGC	5 cut(s)	247, 334, 681, 755, 1489
BspANI	GGCC	5 cut(s)	159, 636, 850, 1894, 1934
BspCNI	CTCAG	3 cut(s)	862, 1743, 1804
BspFNI	CGCG	3 cut(s)	334, 501, 681
BspHI	TCATGA	1 cut(s)	670
BspLI	GGNNCC	4 cut(s)	301, 612, 813, 1683
BspMAI	CTGCAG	1 cut(s)	1972
BspPI	GGATC	3 cut(s)	137, 1194, 1286
BspQI	GCTCTTC	1 cut(s)	1969
BspT104I	TTCGAA	1 cut(s)	842
BspT107I	GGYRCC	2 cut(s)	299, 610
BspTI	CTTAAG	1 cut(s)	1600
BsrBI	CCGCTC	1 cut(s)	1489
BsrDI	GCAATG	2 cut(s)	81, 345
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	5 cut(s)	85, 313, 637, 992, 1341
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	8 cut(s)	230, 974, 1051, 1382, 1460, 1667, 1817, 1828
BssMI	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
BssNI	GRCGYC	1 cut(s)	300
BssT1I	CCWWGG	2 cut(s)	974, 1460
Bst2UI	CCWGG	5 cut(s)	232, 1053, 1668, 1818, 2009
Bst4CI	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1439, 1747
Bst6I	CTCTTC	2 cut(s)	1279, 1969
BstACI	GRCGYC	1 cut(s)	300
BstAFI	CTTAAG	1 cut(s)	1600
BstAPI	GCANNNNNTGC	2 cut(s)	1411, 1959
BstBI	TTCGAA	1 cut(s)	842
BstC8I	GCNNGC	4 cut(s)	336, 1098, 1416, 1454
BstDEI	CTNAG	4 cut(s)	870, 1645, 1730, 1812
BstDSI	CCRYGG	2 cut(s)	1460, 1828
BstENI	CCTNNNNNAGG	1 cut(s)	1056
BstF5I	GGATG	2 cut(s)	1084, 2017
BstFNI	CGCG	3 cut(s)	334, 501, 681
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	6 cut(s)	302, 334, 420, 503, 577, 1345
BstKTI	GATC	8 cut(s)	132, 453, 825, 943, 1189, 1294, 1579, 1611
BstMAI	GTCTC	2 cut(s)	68, 1224
BstMBI	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
BstMWI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1462, 1495, 1959
BstNI	CCWGG	5 cut(s)	232, 1053, 1668, 1818, 2009
BstSCI	CCNGG	7 cut(s)	230, 725, 1051, 1381, 1666, 1816, 2007
BstSFI	CTRYAG	3 cut(s)	783, 1887, 1968
BstUI	CGCG	3 cut(s)	334, 501, 681
BstV1I	GCAGC	1 cut(s)	316
BstV2I	GAAGAC	1 cut(s)	1315
BstX2I	RGATCY	2 cut(s)	822, 1186
BstXI	CCANNNNNNTGG	1 cut(s)	1942
BstYI	RGATCY	2 cut(s)	822, 1186
Bsu36I	CCTNAGG	1 cut(s)	1645
BsuI	GTATCC	1 cut(s)	921
BsuRI	GGCC	5 cut(s)	159, 636, 850, 1894, 1934
BtgI	CCRYGG	2 cut(s)	1460, 1828
BtsCI	GGATG	2 cut(s)	1084, 2017
BtsI	GCAGTG	3 cut(s)	966, 1715, 1977
BtsIMutI	CAGTG	6 cut(s)	966, 1040, 1240, 1715, 1738, 1977
Cac8I	GCNNGC	4 cut(s)	336, 1098, 1416, 1454
CciI	TCATGA	1 cut(s)	670
CfoI	GCGC	6 cut(s)	302, 334, 420, 503, 577, 1345
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	158, 1682, 1892
CseI	GACGC	1 cut(s)	1309
Csp6I	GTAC	1 cut(s)	205
CviQI	GTAC	1 cut(s)	205
DdeI	CTNAG	4 cut(s)	870, 1645, 1730, 1812
DinI	GGCGCC	1 cut(s)	301
DpnI	GATC	8 cut(s)	131, 452, 824, 942, 1188, 1293, 1578, 1610
DpnII	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
DriI	GACNNNNNGTC	1 cut(s)	354
EaeI	YGGCCR	2 cut(s)	634, 1932
Eam1104I	CTCTTC	2 cut(s)	1279, 1969
Eam1105I	GACNNNNNGTC	1 cut(s)	354
EarI	CTCTTC	2 cut(s)	1279, 1969
Ecl136II	GAGCTC	2 cut(s)	81, 472
Eco130I	CCWWGG	2 cut(s)	974, 1460
Eco24I	GRGCYC	3 cut(s)	83, 474, 1142
Eco32I	GATATC	1 cut(s)	490
Eco47I	GGWCC	1 cut(s)	1682
Eco53kI	GAGCTC	2 cut(s)	81, 472
Eco57I	CTGAAG	2 cut(s)	917, 1536
Eco81I	CCTNAGG	1 cut(s)	1645
Eco88I	CYCGRG	2 cut(s)	69, 473
EcoICRI	GAGCTC	2 cut(s)	81, 472
EcoNI	CCTNNNNNAGG	1 cut(s)	1056
EcoO109I	RGGNCCY	1 cut(s)	1682
EcoRII	CCWGG	5 cut(s)	230, 1051, 1666, 1816, 2007
EcoRV	GATATC	1 cut(s)	490
EcoT14I	CCWWGG	2 cut(s)	974, 1460
EcoT22I	ATGCAT	2 cut(s)	1304, 1525
EcoT38I	GRGCYC	3 cut(s)	83, 474, 1142
EgeI	GGCGCC	1 cut(s)	301
EheI	GGCGCC	1 cut(s)	301
ErhI	CCWWGG	2 cut(s)	974, 1460
Esp3I	CGTCTC	1 cut(s)	68
FalI	AAGNNNNNCTT	4 cut(s)	30, 62, 1948, 1980
FaqI	GGGAC	2 cut(s)	964, 1034
FauI	CCCGC	1 cut(s)	327
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	2 cut(s)	347, 1886
Fnu4HI	GCNGC	2 cut(s)	330, 755
FokI	GGATG	2 cut(s)	1091, 2024
FriOI	GRGCYC	3 cut(s)	83, 474, 1142
Fsp4HI	GCNGC	2 cut(s)	330, 755
FspAI	RTGCGCAY	1 cut(s)	576
FspBI	CTAG	2 cut(s)	975, 1179
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	6 cut(s)	301, 333, 419, 502, 576, 1344
GluI	GCNGC	2 cut(s)	330, 755
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	5 cut(s)	159, 636, 850, 1894, 1934
HapII	CCGG	5 cut(s)	114, 303, 726, 1382, 1474
HgaI	GACGC	1 cut(s)	1309
HhaI	GCGC	6 cut(s)	302, 334, 420, 503, 577, 1345
Hin1I	GRCGYC	1 cut(s)	300
Hin6I	GCGC	6 cut(s)	300, 332, 418, 501, 575, 1343
HinP1I	GCGC	6 cut(s)	300, 332, 418, 501, 575, 1343
HincII	GTYRAC	3 cut(s)	103, 348, 997
HindII	GTYRAC	3 cut(s)	103, 348, 997
HindIII	AAGCTT	4 cut(s)	665, 1554, 1925, 1980
HpaII	CCGG	5 cut(s)	114, 303, 726, 1382, 1474
HphI	GGTGA	9 cut(s)	41, 58, 103, 376, 406, 557, 1067, 1670, 1867
Hpy166II	GTNNAC	7 cut(s)	103, 348, 997, 1072, 1636, 1661, 1887
Hpy188I	TCNGA	7 cut(s)	98, 124, 466, 535, 811, 1516, 1867
Hpy188III	TCNNGA	8 cut(s)	290, 602, 671, 820, 944, 1135, 1149, 1480
Hpy8I	GTNNAC	7 cut(s)	103, 348, 997, 1072, 1636, 1661, 1887
Hpy99I	CGWCG	3 cut(s)	143, 352, 1596
HpyCH4III	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1439, 1747
HpyF10VI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1462, 1495, 1959
HpyF3I	CTNAG	4 cut(s)	870, 1645, 1730, 1812
Hsp92I	GRCGYC	1 cut(s)	300
HspAI	GCGC	6 cut(s)	300, 332, 418, 501, 575, 1343
KasI	GGCGCC	1 cut(s)	299
Ksp22I	TGATCA	1 cut(s)	450
Kzo9I	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
LguI	GCTCTTC	1 cut(s)	1969
LmnI	GCTCC	3 cut(s)	86, 99, 1672
Lsp1109I	GCAGC	1 cut(s)	316
LweI	GCATC	3 cut(s)	1128, 1354, 1510
MaeI	CTAG	2 cut(s)	975, 1179
MaeIII	GTNAC	6 cut(s)	40, 268, 364, 1004, 1019, 1275
MalI	GATC	8 cut(s)	131, 452, 824, 942, 1188, 1293, 1578, 1610
MbiI	CCGCTC	1 cut(s)	1489
MboI	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
MboII	GAAGA	7 cut(s)	156, 418, 1094, 1296, 1315, 1529, 1956
MflI	RGATCY	2 cut(s)	822, 1186
MhlI	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1872
MlsI	TGGCCA	2 cut(s)	636, 1934
MluCI	AATT	8 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1805
MluNI	TGGCCA	2 cut(s)	636, 1934
Mly113I	GGCGCC	1 cut(s)	300
MlyI	GAGTC	6 cut(s)	108, 218, 386, 607, 865, 1012
MmeI	TCCRAC	2 cut(s)	192, 789
Mox20I	TGGCCA	2 cut(s)	636, 1934
Mph1103I	ATGCAT	2 cut(s)	1304, 1525
MscI	TGGCCA	2 cut(s)	636, 1934
MseI	TTAA	7 cut(s)	54, 750, 1175, 1257, 1328, 1601, 1722
MslI	CAYNNNNRTG	3 cut(s)	576, 658, 777
Msp20I	TGGCCA	2 cut(s)	636, 1934
MspCI	CTTAAG	1 cut(s)	1600
MspI	CCGG	5 cut(s)	114, 303, 726, 1382, 1474
MspR9I	CCNGG	7 cut(s)	232, 727, 1053, 1383, 1668, 1818, 2009
MvaI	CCWGG	5 cut(s)	232, 1053, 1668, 1818, 2009
MvnI	CGCG	3 cut(s)	334, 501, 681
MwoI	GCNNNNNNNGC	7 cut(s)	191, 335, 574, 1411, 1462, 1495, 1959
NarI	GGCGCC	1 cut(s)	300
NciI	CCSGG	2 cut(s)	727, 1383
NcoI	CCATGG	1 cut(s)	1460
NdeII	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
NlaIV	GGNNCC	4 cut(s)	301, 612, 813, 1683
NmuCI	GTSAC	3 cut(s)	364, 1004, 1019
NsbI	TGCGCA	1 cut(s)	576
NsiI	ATGCAT	2 cut(s)	1304, 1525
NspV	TTCGAA	1 cut(s)	842
PaeI	GCATGC	2 cut(s)	1100, 1456
PaeR7I	CTCGAG	1 cut(s)	473
PagI	TCATGA	1 cut(s)	670
PciI	ACATGT	3 cut(s)	353, 582, 1363
PciSI	GCTCTTC	1 cut(s)	1969
PcsI	WCGNNNNNNNCGW	3 cut(s)	67, 138, 144
PfeI	GAWTC	4 cut(s)	530, 709, 1502, 1862
PflFI	GACNNNGTC	1 cut(s)	1319
PflMI	CCANNNNNTGG	2 cut(s)	1787, 2000
PkrI	GCNGC	2 cut(s)	331, 756
PleI	GAGTC	6 cut(s)	107, 218, 385, 606, 864, 1011
PluTI	GGCGCC	1 cut(s)	303
PpsI	GAGTC	6 cut(s)	107, 218, 385, 606, 864, 1011
PpuMI	RGGWCCY	1 cut(s)	1682
PscI	ACATGT	3 cut(s)	353, 582, 1363
PsiI	TTATAA	1 cut(s)	1775
Psp124BI	GAGCTC	2 cut(s)	83, 474
Psp5II	RGGWCCY	1 cut(s)	1682
Psp6I	CCWGG	5 cut(s)	230, 1051, 1666, 1816, 2007
PspGI	CCWGG	5 cut(s)	230, 1051, 1666, 1816, 2007
PspN4I	GGNNCC	4 cut(s)	301, 612, 813, 1683
PspPI	GGNCC	3 cut(s)	158, 1682, 1892
PspPPI	RGGWCCY	1 cut(s)	1682
PspXI	VCTCGAGB	1 cut(s)	473
PsrI	GAACNNNNNNTAC	2 cut(s)	227, 259
PstI	CTGCAG	1 cut(s)	1972
PsuI	RGATCY	2 cut(s)	822, 1186
PsyI	GACNNNGTC	1 cut(s)	1319
RsaI	GTAC	1 cut(s)	206
RsaNI	GTAC	1 cut(s)	205
RseI	CAYNNNNRTG	3 cut(s)	576, 658, 777
SacI	GAGCTC	2 cut(s)	83, 474
SalI	GTCGAC	1 cut(s)	346
SapI	GCTCTTC	1 cut(s)	1969
SaqAI	TTAA	7 cut(s)	54, 750, 1175, 1257, 1328, 1601, 1722
SatI	GCNGC	2 cut(s)	330, 755
Sau3AI	GATC	8 cut(s)	129, 450, 822, 940, 1186, 1291, 1576, 1608
Sau96I	GGNCC	3 cut(s)	158, 1682, 1892
SchI	GAGTC	6 cut(s)	108, 218, 386, 607, 865, 1012
ScrFI	CCNGG	7 cut(s)	232, 727, 1053, 1383, 1668, 1818, 2009
SduI	GDGCHC	5 cut(s)	83, 474, 653, 1142, 1872
SfaNI	GCATC	3 cut(s)	1128, 1354, 1510
SfcI	CTRYAG	3 cut(s)	783, 1887, 1968
SfoI	GGCGCC	1 cut(s)	301
Sfr274I	CTCGAG	1 cut(s)	473
SfuI	TTCGAA	1 cut(s)	842
SinI	GGWCC	1 cut(s)	1682
SlaI	CTCGAG	1 cut(s)	473
SmiMI	CAYNNNNRTG	3 cut(s)	576, 658, 777
SmlI	CTYRAG	4 cut(s)	473, 504, 1190, 1600
SmoI	CTYRAG	4 cut(s)	473, 504, 1190, 1600
SphI	GCATGC	2 cut(s)	1100, 1456
Sse9I	AATT	8 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1805
SsiI	CCGC	5 cut(s)	247, 334, 681, 755, 1489
SspDI	GGCGCC	1 cut(s)	299
SspI	AATATT	2 cut(s)	1409, 1548
SspMI	CTAG	2 cut(s)	975, 1179
SstI	GAGCTC	2 cut(s)	83, 474
StyD4I	CCNGG	7 cut(s)	230, 725, 1051, 1381, 1666, 1816, 2007
StyI	CCWWGG	2 cut(s)	974, 1460
TaaI	ACNGT	6 cut(s)	268, 610, 1035, 1235, 1439, 1747
TaqI	TCGA	9 cut(s)	138, 210, 320, 347, 474, 842, 901, 943, 1611
TasI	AATT	8 cut(s)	493, 800, 830, 915, 985, 1215, 1221, 1805
TauI	GCSGC	1 cut(s)	757
TfiI	GAWTC	4 cut(s)	530, 709, 1502, 1862
Tru1I	TTAA	7 cut(s)	54, 750, 1175, 1257, 1328, 1601, 1722
Tru9I	TTAA	7 cut(s)	54, 750, 1175, 1257, 1328, 1601, 1722
TscAI	CASTG	6 cut(s)	973, 1040, 1240, 1715, 1738, 1977
TseFI	GTSAC	3 cut(s)	364, 1004, 1019
TseI	GCWGC	1 cut(s)	329
Tsp45I	GTSAC	3 cut(s)	364, 1004, 1019
TspDTI	ATGAA	8 cut(s)	419, 659, 761, 807, 896, 909, 1094, 1095
TspGWI	ACGGA	1 cut(s)	1057
TspRI	CASTG	6 cut(s)	973, 1040, 1240, 1715, 1738, 1977
Tth111I	GACNNNGTC	1 cut(s)	1319
Van91I	CCANNNNNTGG	2 cut(s)	1787, 2000
Vha464I	CTTAAG	1 cut(s)	1600
VpaK11BI	GGWCC	1 cut(s)	1682
XagI	CCTNNNNNAGG	1 cut(s)	1056
XapI	RAATTY	3 cut(s)	830, 985, 1805
XhoI	CTCGAG	1 cut(s)	473
XmaJI	CCTAGG	1 cut(s)	974
XmiI	GTMKAC	2 cut(s)	347, 1886
XspI	CTAG	2 cut(s)	975, 1179
Zsp2I	ATGCAT	2 cut(s)	1304, 1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.