RLG00000000547

DnaJ heat shock amino-terminal domain protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0009211
Physical Location & Seq
Reverse (-)
1906517 .. 1909037
2521 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000547

Sequence Viewer

Length: 1764 bp
ATGGCTGCTGCTACTTCTCCTTGTCTCTCTTCTAATGACAAGAAGCACTGGTGGCTTAGCACTAGAAAGATTGTGGACAGGTATATCAGAGACGCCAGAAGCCTGATTGCCAGTCATGAACACAGCGAGATCGCCTCCGCCGTGGGACTACTAGACGCGGCCCTCGCAATCTCACCCCGGCTCGAACAAGCCCTCGAACTCAAAGCCAGGTCTCTGCTCTTTCTCGGCCGATTCAAAGACGTGGCTGATATGCTCCAGGACTACATTCCCAGCCTCAAAATCGGAATCGAAGACTCCTCCGGCTCATCCGACTCTTCGTCGTCTCAGAATCTATCGAGGGAGCAAGTCAAGCTTCTCTCGGCCAACAGCACCAACTCCTCCTCCGACTCGCCATGTCAGGATCCCTCCTTCAAGTGCTTCTCTATCTCCGACTTGAAGAAGAAAGTCATGGCAGGCCTCTGCAAAAATTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTCTGGGGCAGGCTTGCTGCCATTTGGGACTAATGGAGGATGCCATGGCCCTCCTCCAAACCGGCAAACGCCTCGCTGCTGCCGCATTCCGCCGCGAGAGCACGTGCTTATCCGACGACAGTTTCTCCTTCCCCAATTTTTTCGACAACACATCCTCGTCCTCCACCAACAATGCACCCTCAACGCCCCCGCGGACCTTAACCGAGCCTGAAACCGTGACCCACCTCCTCAGCCACATCAAGCAGCTCCTCCGCCGCAGAACTGCCGCCCTCGCTGCCCTTGAAGTTGGTGCATACTCCGAGTCCATCCGCCACTTCAGCAAAATCCTCGACGGCCGGCGAGGTGCACCCCAGGGATTCCTGGCGGAGTGCTACATGCAACGCGCCTCAGCGTACCGGGCTACTGGTCGGATAGCGGAGGCCATTGCGGACTGCAATCGGACTTTGGCTCTTGACCCCAGTTGTATACAAGCATTAGACACAAGAGCTGCACTTCTCGAAGCAATCAGGTGTTTGCCGGATTGCTTGCACGATCTAGAGCACTTGAAGCTTTTGTACAATTCAATTTTGAGGGACCGAAAGCTTCCCGGTCCGGCATGGAAAAGACACAACAATGTCAGGTACAGAGAAATTCCGGGGAAATTATGTGTTCTGACGACGAAGATACAAGAACTGAAACAGAGGGTGGCTTCTGGAGAGACAGGAAATGTGGATTATTATGCTTTGATCGGTTTAAGAAGGGGGTGTTCGAGATCCGAGTTAGACAAGGCTTATTTGTTGCTGTGTTTGAGGCACAAGCCTGATAAGGCCACTGTTTTCATTGATCGGTGTGAGTTAGCTGATGATCGCGATATTGATTCGGTTAGAGATAGAGCAAAGCTATCTGCATTGTTGCTGTACAGATTGCTTCAGAAAGGCTATTCTAGTTTGAGCACCACCATTATGGACGAAGAGGCTTCTGAGAAACAGAGAAAGAAGGCTGTGGCTGCACTTCAAGCAGCTCAAGCTCAAGCACAGGCTCATGCTCAGGCCGCACAGGCTGCAGCAGCGGCAGCAATTCAAATCCAACAGACCCAAGAAGCCATGATTGAATTCGAATCTGCTTCCTCAAATTCGAATTCGAATAGTAATAGGATGGTTCATTCATCGGAAGCGAAAGCGTTCCAAGGGGTGTTTTGCAGAGACATTGCGGTGGTTGGGAATTTGCTGTCGCAAGTAAGGTTTAACCGCCCAATTACAGTCAAGTATGAGGCATTGAGCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

588

Amino Acids

64.76

Weight (kDa)

8.85

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 288 - 321 8.3e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 964
AccII CGCG 5 cut(s) 158, 594, 691, 882, 1347
AclWI GGATC 3 cut(s) 395, 408, 1245
AcoI YGGCCR 3 cut(s) 226, 360, 832
AcsI RAATTY 5 cut(s) 1128, 1589, 1609, 1615, 1699
AcuI CTGAAG 2 cut(s) 799, 1391
AcvI CACGTG 1 cut(s) 603
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 5 cut(s) 494, 893, 1055, 1121, 1397
AgsI TTSAA 9 cut(s) 235, 412, 436, 782, 1045, 1062, 1493, 1559, 1589
AhdI GACNNNNNGTC 1 cut(s) 316
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 4 cut(s) 206, 255, 849, 858
Alw21I GWGCWC 4 cut(s) 602, 847, 1041, 1433
Alw26I GTCTC 6 cut(s) 29, 84, 216, 327, 1190, 1674
Alw44I GTGCAC 1 cut(s) 843
AlwI GGATC 3 cut(s) 395, 408, 1245
AoxI GGCC 9 cut(s) 159, 226, 360, 454, 546, 832, 918, 1305, 1527
ApaLI GTGCAC 1 cut(s) 843
ApoI RAATTY 5 cut(s) 1128, 1589, 1609, 1615, 1699
Asp700I GAANNNNTTC 1 cut(s) 1658
AspLEI GCGC 1 cut(s) 884
AspS9I GGNCC 5 cut(s) 160, 547, 693, 1072, 1088
AsuC2I CCSGG 4 cut(s) 178, 896, 1086, 1134
AsuHPI GGTGA 1 cut(s) 165
AsuII TTCGAA 3 cut(s) 1593, 1613, 1619
AvaII GGWCC 3 cut(s) 693, 1072, 1088
BaeGI GKGCMC 1 cut(s) 847
BamHI GGATCC 1 cut(s) 400
BarI GAAGNNNNNNTAC 2 cut(s) 1037, 1069
BbrPI CACGTG 1 cut(s) 603
BbsI GAAGAC 1 cut(s) 297
Bbv12I GWGCWC 4 cut(s) 602, 847, 1041, 1433
BbvCI CCTCAGC 2 cut(s) 728, 886
BccI CCATC 2 cut(s) 812, 1627
BceAI ACGGC 2 cut(s) 125, 847
BcgI CGANNNNNNTGC 4 cut(s) 553, 587, 808, 842
BciT130I CCWGG 4 cut(s) 208, 257, 851, 860
BcnI CCSGG 4 cut(s) 178, 896, 1086, 1134
BcoDI GTCTC 6 cut(s) 29, 84, 216, 327, 1190, 1674
BfaI CTAG 4 cut(s) 63, 152, 1034, 1422
BfmI CTRYAG 1 cut(s) 1539
BglI GCCNNNNNGGC 1 cut(s) 1535
BlpI GCTNAGC 1 cut(s) 56
Bme1390I CCNGG 8 cut(s) 178, 208, 257, 851, 860, 896, 1086, 1134
Bme18I GGWCC 3 cut(s) 693, 1072, 1088
BmeRI GACNNNNNGTC 1 cut(s) 316
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 5 cut(s) 160, 547, 693, 1072, 1088
BmiI GGNNCC 2 cut(s) 402, 1073
BmrFI CCNGG 8 cut(s) 178, 208, 257, 851, 860, 896, 1086, 1134
BmrI ACTGGG 1 cut(s) 951
BmsI GCATC 1 cut(s) 529
BmuI ACTGGG 1 cut(s) 951
BpiI GAAGAC 1 cut(s) 297
BplI GAGNNNNNCTC 2 cut(s) 119, 151
BpmI CTGGAG 2 cut(s) 239, 1212
Bpu10I CCTNAGC 3 cut(s) 728, 886, 1524
Bpu1102I GCTNAGC 1 cut(s) 56
Bpu14I TTCGAA 3 cut(s) 1593, 1613, 1619
BpuEI CTTGAG 2 cut(s) 1485, 1491
BpuMI CCSGG 4 cut(s) 178, 896, 1086, 1134
BsaAI YACGTR 1 cut(s) 603
BsaHI GRCGYC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 216
BsaJI CCNNGG 8 cut(s) 141, 176, 543, 689, 849, 850, 1133, 1663
BsaXI ACNNNNNCTCC 4 cut(s) 365, 395, 608, 638
Bse118I RCCGGY 2 cut(s) 560, 834
Bse1I ACTGG 4 cut(s) 53, 111, 907, 957
Bse3DI GCAATG 3 cut(s) 491, 921, 1683
BseBI CCWGG 4 cut(s) 208, 257, 851, 860
BseDI CCNNGG 8 cut(s) 141, 176, 543, 689, 849, 850, 1133, 1663
BseGI GGATG 5 cut(s) 305, 544, 650, 804, 1638
BseMI GCAATG 3 cut(s) 491, 921, 1683
BseMII CTCAG 5 cut(s) 338, 742, 900, 1449, 1538
BseNI ACTGG 4 cut(s) 53, 111, 907, 957
BseRI GAGGAG 6 cut(s) 286, 367, 370, 542, 716, 737
BseSI GKGCMC 1 cut(s) 847
BseX3I CGGCCG 2 cut(s) 226, 832
BseYI CCCAGC 1 cut(s) 269
BsgI GTGCAG 2 cut(s) 972, 1470
Bsh1236I CGCG 5 cut(s) 158, 594, 691, 882, 1347
Bsh1285I CGRYCG 2 cut(s) 229, 835
BshFI GGCC 9 cut(s) 161, 228, 362, 456, 548, 834, 920, 1307, 1529
BsiEI CGRYCG 2 cut(s) 229, 835
BsiHKAI GWGCWC 4 cut(s) 602, 847, 1041, 1433
BsiSI CCGG 9 cut(s) 178, 300, 561, 835, 895, 1016, 1086, 1091, 1133
BslFI GGGAC 3 cut(s) 159, 540, 1085
BsmAI GTCTC 6 cut(s) 29, 84, 216, 327, 1190, 1674
BsmBI CGTCTC 2 cut(s) 84, 327
BsmFI GGGAC 3 cut(s) 159, 540, 1085
BsmI GAATGC 1 cut(s) 584
BsnI GGCC 9 cut(s) 161, 228, 362, 456, 548, 834, 920, 1307, 1529
Bso31I GGTCTC 1 cut(s) 216
Bsp119I TTCGAA 3 cut(s) 1593, 1613, 1619
Bsp1286I GDGCHC 4 cut(s) 602, 847, 1041, 1433
Bsp1407I TGTACA 2 cut(s) 1053, 1395
Bsp143I GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
Bsp1720I GCTNAGC 1 cut(s) 56
Bsp19I CCATGG 1 cut(s) 543
Bsp68I TCGCGA 1 cut(s) 1347
BspANI GGCC 9 cut(s) 161, 228, 362, 456, 548, 834, 920, 1307, 1529
BspCNI CTCAG 5 cut(s) 337, 741, 899, 1450, 1537
BspFNI CGCG 5 cut(s) 158, 594, 691, 882, 1347
BspHI TCATGA 1 cut(s) 115
BspLI GGNNCC 2 cut(s) 402, 1073
BspMAI CTGCAG 1 cut(s) 1543
BspPI GGATC 3 cut(s) 395, 408, 1245
BspT104I TTCGAA 3 cut(s) 1593, 1613, 1619
BspTNI GGTCTC 1 cut(s) 216
BsrDI GCAATG 3 cut(s) 491, 921, 1683
BsrFI RCCGGY 2 cut(s) 560, 834
BsrGI TGTACA 2 cut(s) 1053, 1395
BsrI ACTGG 4 cut(s) 53, 111, 907, 957
BssAI RCCGGY 2 cut(s) 560, 834
BssECI CCNNGG 8 cut(s) 141, 176, 543, 689, 849, 850, 1133, 1663
BssMI GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
BssNAI GTATAC 1 cut(s) 965
BssNI GRCGYC 1 cut(s) 93
BssT1I CCWWGG 2 cut(s) 543, 1663
Bst1107I GTATAC 1 cut(s) 965
Bst2UI CCWGG 4 cut(s) 208, 257, 851, 860
Bst4CI ACNGT 4 cut(s) 620, 715, 1312, 1738
Bst6I CTCTTC 3 cut(s) 34, 319, 1443
BstACI GRCGYC 1 cut(s) 93
BstAPI GCANNNNNTGC 2 cut(s) 468, 1538
BstAUI TGTACA 2 cut(s) 1053, 1395
BstBAI YACGTR 1 cut(s) 603
BstBI TTCGAA 3 cut(s) 1593, 1613, 1619
BstC8I GCNNGC 5 cut(s) 454, 510, 514, 836, 1025
BstDEI CTNAG 6 cut(s) 56, 324, 728, 886, 1458, 1524
BstDSI CCRYGG 3 cut(s) 141, 543, 689
BstF5I GGATG 5 cut(s) 305, 544, 650, 804, 1638
BstFNI CGCG 5 cut(s) 158, 594, 691, 882, 1347
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 7 cut(s) 132, 403, 1033, 1227, 1253, 1324, 1345
BstMAI GTCTC 6 cut(s) 29, 84, 216, 327, 1190, 1674
BstMBI GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
BstMCI CGRYCG 2 cut(s) 229, 835
BstNI CCWGG 4 cut(s) 208, 257, 851, 860
BstNSI RCATGY 1 cut(s) 877
BstSCI CCNGG 8 cut(s) 176, 206, 255, 849, 858, 894, 1084, 1132
BstSFI CTRYAG 1 cut(s) 1539
BstSLI GKGCMC 1 cut(s) 847
BstUI CGCG 5 cut(s) 158, 594, 691, 882, 1347
BstV2I GAAGAC 1 cut(s) 297
BstX2I RGATCY 2 cut(s) 400, 1250
BstXI CCANNNNNNTGG 1 cut(s) 1441
BstYI RGATCY 2 cut(s) 400, 1250
BstZ17I GTATAC 1 cut(s) 965
BstZI CGGCCG 2 cut(s) 226, 832
BsuRI GGCC 9 cut(s) 161, 228, 362, 456, 548, 834, 920, 1307, 1529
BtgI CCRYGG 3 cut(s) 141, 543, 689
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 5 cut(s) 305, 544, 650, 804, 1638
BtsIMutI CAGTG 2 cut(s) 46, 1308
BtuMI TCGCGA 1 cut(s) 1347
Cac8I GCNNGC 5 cut(s) 454, 510, 514, 836, 1025
CciI TCATGA 1 cut(s) 115
CfoI GCGC 1 cut(s) 884
Cfr10I RCCGGY 2 cut(s) 560, 834
Cfr13I GGNCC 5 cut(s) 160, 547, 693, 1072, 1088
Cfr42I CCGCGG 1 cut(s) 692
CpoI CGGWCCG 1 cut(s) 1088
CseI GACGC 2 cut(s) 101, 164
Csp6I GTAC 5 cut(s) 493, 892, 1054, 1120, 1396
CspI CGGWCCG 1 cut(s) 1088
CviAII CATG 8 cut(s) 116, 393, 448, 544, 874, 1095, 1520, 1582
CviQI GTAC 5 cut(s) 493, 892, 1054, 1120, 1396
DdeI CTNAG 6 cut(s) 56, 324, 728, 886, 1458, 1524
DpnI GATC 7 cut(s) 131, 402, 1032, 1226, 1252, 1323, 1344
DpnII GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
DriI GACNNNNNGTC 1 cut(s) 316
EaeI YGGCCR 3 cut(s) 226, 360, 832
EagI CGGCCG 2 cut(s) 226, 832
Eam1104I CTCTTC 3 cut(s) 34, 319, 1443
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 3 cut(s) 34, 319, 1443
EciI GGCGGA 5 cut(s) 127, 578, 740, 797, 878
EclXI CGGCCG 2 cut(s) 226, 832
Eco130I CCWWGG 2 cut(s) 543, 1663
Eco147I AGGCCT 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 216
Eco47I GGWCC 3 cut(s) 693, 1072, 1088
Eco52I CGGCCG 2 cut(s) 226, 832
Eco57I CTGAAG 2 cut(s) 799, 1391
Eco72I CACGTG 1 cut(s) 603
EcoRI GAATTC 2 cut(s) 1589, 1615
EcoRII CCWGG 4 cut(s) 206, 255, 849, 858
EcoT14I CCWWGG 2 cut(s) 543, 1663
ErhI CCWWGG 2 cut(s) 543, 1663
Esp3I CGTCTC 2 cut(s) 84, 327
FaeI CATG 8 cut(s) 119, 396, 451, 547, 877, 1098, 1523, 1585
FalI AAGNNNNNCTT 2 cut(s) 336, 368
FaqI GGGAC 3 cut(s) 159, 540, 1085
FatI CATG 8 cut(s) 115, 392, 447, 543, 873, 1094, 1519, 1581
FauI CCCGC 1 cut(s) 696
FblI GTMKAC 1 cut(s) 964
FokI GGATG 5 cut(s) 292, 551, 637, 791, 1645
FspBI CTAG 4 cut(s) 63, 152, 1034, 1422
GlaI GCGC 1 cut(s) 883
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 239, 1212
HaeIII GGCC 9 cut(s) 161, 228, 362, 456, 548, 834, 920, 1307, 1529
HapII CCGG 9 cut(s) 178, 300, 561, 835, 895, 1016, 1086, 1091, 1133
HgaI GACGC 2 cut(s) 101, 164
HhaI GCGC 1 cut(s) 884
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 8 cut(s) 119, 396, 451, 547, 877, 1098, 1523, 1585
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HindIII AAGCTT 3 cut(s) 350, 1046, 1079
HpaII CCGG 9 cut(s) 178, 300, 561, 835, 895, 1016, 1086, 1091, 1133
HphI GGTGA 1 cut(s) 165
Hpy166II GTNNAC 3 cut(s) 76, 845, 965
Hpy188III TCNNGA 8 cut(s) 116, 398, 950, 995, 1034, 1191, 1248, 1346
Hpy8I GTNNAC 3 cut(s) 76, 845, 965
Hpy99I CGWCG 4 cut(s) 322, 617, 833, 1159
HpyAV CCTTC 5 cut(s) 418, 473, 637, 1230, 1468
HpyCH4III ACNGT 4 cut(s) 620, 715, 1312, 1738
HpyCH4IV ACGT 2 cut(s) 240, 602
HpyF3I CTNAG 6 cut(s) 56, 324, 728, 886, 1458, 1524
HpySE526I ACGT 2 cut(s) 240, 602
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 8 cut(s) 119, 396, 451, 547, 877, 1098, 1523, 1585
HspAI GCGC 1 cut(s) 882
KroI GCCGGC 1 cut(s) 834
KroNI GCCGGC 1 cut(s) 836
KspI CCGCGG 1 cut(s) 692
Kzo9I GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
LmnI GCTCC 3 cut(s) 258, 340, 750
LweI GCATC 1 cut(s) 529
MaeI CTAG 4 cut(s) 63, 152, 1034, 1422
MaeII ACGT 2 cut(s) 240, 602
MaeIII GTNAC 1 cut(s) 715
MalI GATC 7 cut(s) 131, 402, 1032, 1226, 1252, 1323, 1344
MboI GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
MboII GAAGA 7 cut(s) 21, 302, 306, 448, 451, 1171, 1460
MflI RGATCY 2 cut(s) 400, 1250
MhlI GDGCHC 4 cut(s) 602, 847, 1041, 1433
MlyI GAGTC 4 cut(s) 287, 305, 380, 809
MmeI TCCRAC 6 cut(s) 333, 408, 453, 636, 887, 1588
MroNI GCCGGC 1 cut(s) 834
MroXI GAANNNNTTC 1 cut(s) 1658
MseI TTAA 3 cut(s) 698, 1232, 1722
MslI CAYNNNNRTG 3 cut(s) 1110, 1439, 1688
MspA1I CMGCKG 2 cut(s) 691, 1547
MspI CCGG 9 cut(s) 178, 300, 561, 835, 895, 1016, 1086, 1091, 1133
MspR9I CCNGG 8 cut(s) 178, 208, 257, 851, 860, 896, 1086, 1134
Mva1269I GAATGC 1 cut(s) 584
MvaI CCWGG 4 cut(s) 208, 257, 851, 860
MvnI CGCG 5 cut(s) 158, 594, 691, 882, 1347
NaeI GCCGGC 1 cut(s) 836
NciI CCSGG 4 cut(s) 178, 896, 1086, 1134
NcoI CCATGG 1 cut(s) 543
NdeII GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
NgoMIV GCCGGC 1 cut(s) 834
NlaIII CATG 8 cut(s) 119, 396, 451, 547, 877, 1098, 1523, 1585
NlaIV GGNNCC 2 cut(s) 402, 1073
NmeAIII GCCGAG 2 cut(s) 204, 338
NmuCI GTSAC 1 cut(s) 715
NruI TCGCGA 1 cut(s) 1347
NspI RCATGY 1 cut(s) 877
NspV TTCGAA 3 cut(s) 1593, 1613, 1619
PagI TCATGA 1 cut(s) 115
PasI CCCWGGG 1 cut(s) 850
PceI AGGCCT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 1 cut(s) 584
PdiI GCCGGC 1 cut(s) 836
PdmI GAANNNNTTC 1 cut(s) 1658
PfeI GAWTC 6 cut(s) 231, 285, 328, 855, 1355, 1595
PfoI TCCNGGA 1 cut(s) 255
PleI GAGTC 4 cut(s) 287, 305, 380, 808
PmaCI CACGTG 1 cut(s) 603
PmlI CACGTG 1 cut(s) 603
PpsI GAGTC 4 cut(s) 287, 305, 380, 808
Ppu21I YACGTR 1 cut(s) 603
Psp6I CCWGG 4 cut(s) 206, 255, 849, 858
PspCI CACGTG 1 cut(s) 603
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 4 cut(s) 206, 255, 849, 858
PspN4I GGNNCC 2 cut(s) 402, 1073
PspPI GGNCC 5 cut(s) 160, 547, 693, 1072, 1088
PstI CTGCAG 1 cut(s) 1543
PsuI RGATCY 2 cut(s) 400, 1250
RruI TCGCGA 1 cut(s) 1347
RsaI GTAC 5 cut(s) 494, 893, 1055, 1121, 1397
RsaNI GTAC 5 cut(s) 493, 892, 1054, 1120, 1396
RseI CAYNNNNRTG 3 cut(s) 1110, 1439, 1688
Rsr2I CGGWCCG 1 cut(s) 1088
RsrII CGGWCCG 1 cut(s) 1088
SacII CCGCGG 1 cut(s) 692
SaqAI TTAA 3 cut(s) 698, 1232, 1722
Sau3AI GATC 7 cut(s) 129, 400, 1030, 1224, 1250, 1321, 1342
Sau96I GGNCC 5 cut(s) 160, 547, 693, 1072, 1088
SchI GAGTC 4 cut(s) 287, 305, 380, 809
ScrFI CCNGG 8 cut(s) 178, 208, 257, 851, 860, 896, 1086, 1134
SduI GDGCHC 4 cut(s) 602, 847, 1041, 1433
SfaNI GCATC 1 cut(s) 529
SfcI CTRYAG 1 cut(s) 1539
Sfr303I CCGCGG 1 cut(s) 692
SfuI TTCGAA 3 cut(s) 1593, 1613, 1619
SgrBI CCGCGG 1 cut(s) 692
SinI GGWCC 3 cut(s) 693, 1072, 1088
SmiMI CAYNNNNRTG 3 cut(s) 1110, 1439, 1688
SmlI CTYRAG 2 cut(s) 1500, 1506
SmoI CTYRAG 2 cut(s) 1500, 1506
SseBI AGGCCT 1 cut(s) 456
SspMI CTAG 4 cut(s) 63, 152, 1034, 1422
StuI AGGCCT 1 cut(s) 456
StyD4I CCNGG 8 cut(s) 176, 206, 255, 849, 858, 894, 1084, 1132
StyI CCWWGG 2 cut(s) 543, 1663
TaaI ACNGT 4 cut(s) 620, 715, 1312, 1738
TaiI ACGT 2 cut(s) 243, 605
TaqII GACCGA 1 cut(s) 1089
TatI WGTACW 2 cut(s) 1053, 1395
TauI GCSGC 7 cut(s) 161, 584, 594, 756, 767, 1532, 1550
TfiI GAWTC 6 cut(s) 231, 285, 328, 855, 1355, 1595
Tru1I TTAA 3 cut(s) 698, 1232, 1722
Tru9I TTAA 3 cut(s) 698, 1232, 1722
TscAI CASTG 2 cut(s) 53, 1315
TseFI GTSAC 1 cut(s) 715
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 4 cut(s) 132, 1306, 1628, 1632
TspRI CASTG 2 cut(s) 53, 1315
VneI GTGCAC 1 cut(s) 843
VpaK11BI GGWCC 3 cut(s) 693, 1072, 1088
XapI RAATTY 5 cut(s) 1128, 1589, 1609, 1615, 1699
XbaI TCTAGA 1 cut(s) 1033
XceI RCATGY 1 cut(s) 877
XmiI GTMKAC 1 cut(s) 964
XmnI GAANNNNTTC 1 cut(s) 1658
XspI CTAG 4 cut(s) 63, 152, 1034, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.