Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007323

Physical Location & Seq

Genomic Coordinates Forward (+)

38463604 .. 38469435

Gene Structure 5832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0346900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTTTAAGCAAGCCTCTGATTCCCGTCACATCTTCACAATGCCTTCCATCGCCGACCTCAGCGTTGAACTTGAATCCAACGCCGTCGGATCTGCCGGAGTTTCTACTCCTCCGAAACGGAGGCTGAGATCCAATTCGTCGCCGATGAAGCTGAGTCCGATGAAATGCAAGCGCATTGGAGTTTCTTCCGTCGCGAAATTACGCAACGTTGAGGTCGAATCGGAGAGGAGCGTGGAGGAGGTAGTCGGATCCGGCGGTGATTTGACTCCTCAGAAGCGGAAGTTGAGGTCCGATTCGTCGTCGCCGATGAAGCCGAGACCTGTCTCGTCGCCGATGAAGTGTAAATCGGCTCGCCGGAACCTCAGTGCTTGCACCAGCACTCCTGCAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCCTCAAGCCTTTTGCAAACCACCGATTGTTGCTAAGCCGAATTGGAATCCCAGAGATAAGGAGCAGATGAGGATAGTGAAGGAGGCATTGCACTTGTCAACGGTCCCCTCTACTGTTGCGTGCCGCGATGTGGAGCAGAAGAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCCGGGAGTTTATATGTATGCGGGTGTCCTGGGACCGGAAAGTCCTTGTCCATGGAGAAAGTGAAACAGCTTTTGGTGAATTGGGCAGGAGAGGGTGGATTTCAGGAACCGGATGTGTTGGAATTGAACTGTACATCGCTAACAAAAACTTCTGATATTTTCGCTAAGATACTTGGTAAATACCAACCTCAAAAGAAAGCTAATGGCACTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAAAAGCCTCAGTCAGATGGGACTAAGATGATGTTGATAATAGCTGATGAGTTGGATTACTTAATCACTAAAGACCGGGTAGTGCTCCATGACCTTTTCATGCTCACAACATACCCATTCTCAAGATGTATACTTTTAGGAGTAGCAAATGCAATCGACTTAGCTGATCGTTTTGTTCCAAAACTTCAGTCATTAAATTGTAAGCCTATGGTTATAACTTTTCGGGCATACTCTAAGGATCAGATTCTCAAGATTCTCCAAGAGAGGCTTATGGCACTACCTTACACTGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCCAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAATTCATCAACAGCAGAGAATCCATTCTCTGAGCAACAGACAGCTCCAGCTCTTGCTCTGGTGAAAAAACAGGAGATTGATATTGTGAGAATTGATCACATGGCCATTGCTTTGTCAAAGACATTCAAGTCACCAGTAGTGGATACCATACAATGTCTTCCTCAACATCAACAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGATACAACTATAGGAGAGTTAAACAAATCTTACATAGACATCTGCAAAGCAACACTAATTCCCCCGGTTGGGAGTTTTGAATTTTCAAGTATGTGCAAAGTGCTAAATGACCAGGGCCTCCTCAAACTCAGTGGCCAATCCAGAGATATAAAATCCAAGAGAGTGACATTGAATGTAGATGAAGGGGACATCACATTTGCATTGCAGGGAATCCGGTTTTTTCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

576

Amino Acids

63.9

Weight (kDa)

9.33

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	201 - 317	3.1e-12	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	359 - 416	2.2e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	472 - 564	4.8e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02110 AT4G02110
fragaria_vesca	FvH4_5g39450 FvH4_5g39450 FvH4_5g39450 FvH4_5g39450
malus_domestica	MD03G1296700.v1.1 MD11G1316200.v1.1 MD11G1316300.v1.1
prunus_persica	Prupe.8G270500_v2.0.a1 Prupe.8G270500_v2.0.a1
pyrus_communis	pycom03g23520 pycom11g27600
rosa_chinensis	RchiOBHm_Chr7g0241761
rosa_laevigata	RLG00000000546
rosa_multiflora	Rmu_co8474925.1_g000001 Rmu_sc0010095.1_g000004
rosa_roxburghii	Rroxscaffold_3G00218690
rosa_rugosa	Rorug07G0346900 Rorug07G0347000
rosa_samantha	Rh7AG501500 Rh7BG472800 Rh7CG517800 Rh7DG486600
rosa_wichuraiana	Rw7G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1061, 1451
AasI	GACNNNNNNGTC	2 cut(s)	643, 1399
AccI	GTMKAC	1 cut(s)	976
AccII	CGCG	2 cut(s)	194, 546
AciI	CCGC	4 cut(s)	255, 277, 544, 624
AclI	AACGTT	1 cut(s)	207
AclWI	GGATC	5 cut(s)	97, 123, 243, 256, 1092
AcoI	YGGCCR	2 cut(s)	1374, 1624
AcsI	RAATTY	2 cut(s)	1273, 1571
AcuI	CTGAAG	2 cut(s)	815, 1016
AfaI	GTAC	1 cut(s)	736
AfiI	CCNNNNNNNGG	5 cut(s)	389, 550, 638, 1559, 1560
AgsI	TTSAA	8 cut(s)	68, 74, 730, 1142, 1399, 1571, 1578, 1663
AjnI	CCWGG	3 cut(s)	631, 1217, 1602
AjuI	GAANNNNNNNTTGG	2 cut(s)	659, 691
AluBI	AGCT	8 cut(s)	151, 673, 803, 890, 1010, 1205, 1316, 1322
AluI	AGCT	8 cut(s)	151, 673, 803, 890, 1010, 1205, 1316, 1322
Alw21I	GWGCWC	2 cut(s)	933, 1460
Alw26I	GTCTC	2 cut(s)	310, 328
AlwI	GGATC	5 cut(s)	97, 123, 243, 256, 1092
AoxI	GGCC	4 cut(s)	603, 1374, 1606, 1624
ApeKI	GCWGC	3 cut(s)	1178, 1181, 1463
ApoI	RAATTY	2 cut(s)	1273, 1571
ArsI	GACNNNNNNTTYG	4 cut(s)	1019, 1051, 1670, 1702
Asp700I	GAANNNNTTC	2 cut(s)	404, 1295
AspLEI	GCGC	1 cut(s)	174
AspS9I	GGNCC	4 cut(s)	288, 523, 636, 1606
AsuC2I	CCSGG	3 cut(s)	607, 923, 1556
AsuHPI	GGTGA	4 cut(s)	269, 691, 1345, 1395
AvaII	GGWCC	3 cut(s)	288, 523, 636
BalI	TGGCCA	2 cut(s)	1376, 1626
BamHI	GGATCC	1 cut(s)	248
BbsI	GAAGAC	1 cut(s)	1421
Bbv12I	GWGCWC	2 cut(s)	933, 1460
BbvCI	CCTCAGC	1 cut(s)	59
BbvI	GCAGC	3 cut(s)	1165, 1168, 1450
BccI	CCATC	2 cut(s)	56, 857
BceAI	ACGGC	1 cut(s)	68
BciT130I	CCWGG	3 cut(s)	633, 1219, 1604
BciVI	GTATCC	1 cut(s)	1408
BclI	TGATCA	1 cut(s)	1366
BcnI	CCSGG	3 cut(s)	607, 923, 1556
BcoDI	GTCTC	2 cut(s)	310, 328
BfmI	CTRYAG	1 cut(s)	1500
BfuI	GTATCC	1 cut(s)	1408
BisI	GCNGC	4 cut(s)	544, 1179, 1182, 1464
BlpI	GCTNAGC	1 cut(s)	453
BlsI	GCNGC	4 cut(s)	545, 1180, 1183, 1465
Bme1390I	CCNGG	6 cut(s)	607, 633, 923, 1219, 1556, 1604
Bme18I	GGWCC	3 cut(s)	288, 523, 636
BmgT120I	GGNCC	4 cut(s)	288, 523, 636, 1606
BmiI	GGNNCC	5 cut(s)	250, 359, 525, 637, 711
BmrFI	CCNGG	6 cut(s)	607, 633, 923, 1219, 1556, 1604
BmsI	GCATC	2 cut(s)	1193, 1224
BpiI	GAAGAC	1 cut(s)	1421
BplI	GAGNNNNNCTC	2 cut(s)	1189, 1221
BpmI	CTGGAG	3 cut(s)	590, 1209, 1302
Bpu10I	CCTNAGC	1 cut(s)	59
Bpu1102I	GCTNAGC	1 cut(s)	453
BpuEI	CTTGAG	3 cut(s)	408, 952, 1079
BpuMI	CCSGG	3 cut(s)	607, 923, 1556
BsaI	GGTCTC	1 cut(s)	310
BsaJI	CCNNGG	5 cut(s)	632, 654, 1477, 1554, 1603
BsaWI	WCCGGW	3 cut(s)	638, 712, 1704
BsaXI	ACNNNNNCTCC	2 cut(s)	364, 394
Bsc4I	CCNNNNNNNGG	5 cut(s)	389, 550, 638, 1559, 1560
Bse1I	ACTGG	1 cut(s)	1406
Bse3DI	GCAATG	3 cut(s)	506, 1377, 1691
BseBI	CCWGG	3 cut(s)	633, 1219, 1604
BseDI	CCNNGG	5 cut(s)	632, 654, 1477, 1554, 1603
BseGI	GGATG	1 cut(s)	721
BseLI	CCNNNNNNNGG	5 cut(s)	389, 550, 638, 1559, 1560
BseMI	GCAATG	3 cut(s)	506, 1377, 1691
BseMII	CTCAG	8 cut(s)	73, 116, 143, 284, 376, 869, 1293, 1633
BseNI	ACTGG	1 cut(s)	1406
BseRI	GAGGAG	5 cut(s)	99, 241, 251, 258, 1601
BseXI	GCAGC	3 cut(s)	1165, 1168, 1450
Bsh1236I	CGCG	2 cut(s)	194, 546
BshFI	GGCC	4 cut(s)	605, 1376, 1608, 1626
BsiHKAI	GWGCWC	2 cut(s)	933, 1460
BsiSI	CCGG	9 cut(s)	96, 252, 355, 606, 639, 713, 922, 1556, 1705
BslFI	GGGAC	4 cut(s)	509, 649, 880, 1691
BslI	CCNNNNNNNGG	5 cut(s)	389, 550, 638, 1559, 1560
BsmAI	GTCTC	2 cut(s)	310, 328
BsmFI	GGGAC	4 cut(s)	509, 649, 880, 1691
BsnI	GGCC	4 cut(s)	605, 1376, 1608, 1626
Bso31I	GGTCTC	1 cut(s)	310
Bsp1286I	GDGCHC	2 cut(s)	933, 1460
Bsp1407I	TGTACA	1 cut(s)	734
Bsp143I	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
Bsp1720I	GCTNAGC	1 cut(s)	453
Bsp19I	CCATGG	1 cut(s)	654
Bsp68I	TCGCGA	1 cut(s)	194
BspACI	CCGC	4 cut(s)	255, 277, 544, 624
BspANI	GGCC	4 cut(s)	605, 1376, 1608, 1626
BspCNI	CTCAG	8 cut(s)	72, 117, 144, 283, 375, 868, 1294, 1632
BspFNI	CGCG	2 cut(s)	194, 546
BspLI	GGNNCC	5 cut(s)	250, 359, 525, 637, 711
BspPI	GGATC	5 cut(s)	97, 123, 243, 256, 1092
BspTNI	GGTCTC	1 cut(s)	310
BsrDI	GCAATG	3 cut(s)	506, 1377, 1691
BsrGI	TGTACA	1 cut(s)	734
BsrI	ACTGG	1 cut(s)	1406
BssECI	CCNNGG	5 cut(s)	632, 654, 1477, 1554, 1603
BssMI	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
BssNAI	GTATAC	1 cut(s)	977
BssT1I	CCWWGG	1 cut(s)	654
Bst1107I	GTATAC	1 cut(s)	977
Bst2UI	CCWGG	3 cut(s)	633, 1219, 1604
Bst4CI	ACNGT	4 cut(s)	523, 535, 734, 1135
Bst6I	CTCTTC	1 cut(s)	554
BstAPI	GCANNNNNTGC	1 cut(s)	585
BstAUI	TGTACA	1 cut(s)	734
BstC8I	GCNNGC	5 cut(s)	12, 170, 352, 370, 541
BstDSI	CCRYGG	2 cut(s)	654, 1477
BstF5I	GGATG	1 cut(s)	721
BstFNI	CGCG	2 cut(s)	194, 546
BstHHI	GCGC	1 cut(s)	174
BstKTI	GATC	6 cut(s)	92, 131, 251, 1015, 1087, 1369
BstMAI	GTCTC	2 cut(s)	310, 328
BstMBI	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
BstMWI	GCNNNNNNNGC	3 cut(s)	148, 310, 585
BstNI	CCWGG	3 cut(s)	633, 1219, 1604
BstNSI	RCATGY	1 cut(s)	1151
BstSCI	CCNGG	6 cut(s)	605, 631, 921, 1217, 1554, 1602
BstSFI	CTRYAG	1 cut(s)	1500
BstUI	CGCG	2 cut(s)	194, 546
BstV1I	GCAGC	3 cut(s)	1165, 1168, 1450
BstV2I	GAAGAC	1 cut(s)	1421
BstX2I	RGATCY	3 cut(s)	89, 128, 248
BstYI	RGATCY	3 cut(s)	89, 128, 248
BstZ17I	GTATAC	1 cut(s)	977
BsuI	GTATCC	1 cut(s)	1408
BsuRI	GGCC	4 cut(s)	605, 1376, 1608, 1626
BtgI	CCRYGG	2 cut(s)	654, 1477
BtgZI	GCGATG	3 cut(s)	34, 561, 723
BtsCI	GGATG	1 cut(s)	721
BtsIMutI	CAGTG	3 cut(s)	370, 1131, 1627
BtuMI	TCGCGA	1 cut(s)	194
Cac8I	GCNNGC	5 cut(s)	12, 170, 352, 370, 541
CfoI	GCGC	1 cut(s)	174
Cfr13I	GGNCC	4 cut(s)	288, 523, 636, 1606
Csp6I	GTAC	1 cut(s)	735
CspCI	CAANNNNNGTGG	4 cut(s)	1134, 1169, 1603, 1638
CviAII	CATG	6 cut(s)	585, 655, 935, 946, 1148, 1372
CviQI	GTAC	1 cut(s)	735
DpnI	GATC	6 cut(s)	91, 130, 250, 1014, 1086, 1368
DpnII	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
DrdI	GACNNNNNNGTC	2 cut(s)	643, 1399
DseDI	GACNNNNNNGTC	2 cut(s)	643, 1399
EaeI	YGGCCR	2 cut(s)	1374, 1624
Eam1104I	CTCTTC	1 cut(s)	554
EarI	CTCTTC	1 cut(s)	554
Eco130I	CCWWGG	1 cut(s)	654
Eco31I	GGTCTC	1 cut(s)	310
Eco47I	GGWCC	3 cut(s)	288, 523, 636
Eco57I	CTGAAG	2 cut(s)	815, 1016
EcoO109I	RGGNCCY	1 cut(s)	1606
EcoRII	CCWGG	3 cut(s)	631, 1217, 1602
EcoT14I	CCWWGG	1 cut(s)	654
EcoT22I	ATGCAT	2 cut(s)	590, 1153
ErhI	CCWWGG	1 cut(s)	654
FaeI	CATG	6 cut(s)	588, 658, 938, 949, 1151, 1375
FalI	AAGNNNNNCTT	2 cut(s)	1098, 1130
FaqI	GGGAC	4 cut(s)	509, 649, 880, 1691
FatI	CATG	6 cut(s)	584, 654, 934, 945, 1147, 1371
FauI	CCCGC	1 cut(s)	617
FbaI	TGATCA	1 cut(s)	1366
FblI	GTMKAC	1 cut(s)	976
Fnu4HI	GCNGC	4 cut(s)	544, 1179, 1182, 1464
FokI	GGATG	1 cut(s)	728
Fsp4HI	GCNGC	4 cut(s)	544, 1179, 1182, 1464
GlaI	GCGC	1 cut(s)	173
GluI	GCNGC	4 cut(s)	544, 1179, 1182, 1464
GsuI	CTGGAG	3 cut(s)	590, 1209, 1302
HaeIII	GGCC	4 cut(s)	605, 1376, 1608, 1626
HapII	CCGG	9 cut(s)	96, 252, 355, 606, 639, 713, 922, 1556, 1705
HhaI	GCGC	1 cut(s)	174
Hin1II	CATG	6 cut(s)	588, 658, 938, 949, 1151, 1375
Hin6I	GCGC	1 cut(s)	172
HinP1I	GCGC	1 cut(s)	172
HincII	GTYRAC	1 cut(s)	519
HindII	GTYRAC	1 cut(s)	519
HpaII	CCGG	9 cut(s)	96, 252, 355, 606, 639, 713, 922, 1556, 1705
HphI	GGTGA	4 cut(s)	269, 691, 1345, 1395
Hpy166II	GTNNAC	2 cut(s)	519, 977
Hpy188III	TCNNGA	8 cut(s)	193, 569, 707, 969, 1096, 1188, 1632, 1724
Hpy8I	GTNNAC	2 cut(s)	519, 977
Hpy99I	CGWCG	6 cut(s)	89, 142, 194, 301, 304, 331
HpyAV	CCTTC	4 cut(s)	54, 493, 595, 1667
HpyCH4III	ACNGT	4 cut(s)	523, 535, 734, 1135
HpyCH4IV	ACGT	1 cut(s)	207
HpyF10VI	GCNNNNNNNGC	3 cut(s)	148, 310, 585
HpySE526I	ACGT	1 cut(s)	207
Hsp92II	CATG	6 cut(s)	588, 658, 938, 949, 1151, 1375
HspAI	GCGC	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	1366
Kzo9I	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
LmnI	GCTCC	5 cut(s)	228, 481, 553, 936, 1321
Lsp1109I	GCAGC	3 cut(s)	1165, 1168, 1450
LweI	GCATC	2 cut(s)	1193, 1224
MaeII	ACGT	1 cut(s)	207
MaeIII	GTNAC	3 cut(s)	26, 1401, 1654
MalI	GATC	6 cut(s)	91, 130, 250, 1014, 1086, 1368
MboI	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
MboII	GAAGA	6 cut(s)	25, 177, 571, 821, 1421, 1498
MfeI	CAATTG	1 cut(s)	1227
MflI	RGATCY	3 cut(s)	89, 128, 248
MhlI	GDGCHC	2 cut(s)	933, 1460
MlsI	TGGCCA	2 cut(s)	1376, 1626
MluNI	TGGCCA	2 cut(s)	1376, 1626
MlyI	GAGTC	2 cut(s)	163, 259
MmeI	TCCRAC	5 cut(s)	67, 102, 226, 702, 879
Mox20I	TGGCCA	2 cut(s)	1376, 1626
Mph1103I	ATGCAT	2 cut(s)	590, 1153
MroXI	GAANNNNTTC	2 cut(s)	404, 1295
MscI	TGGCCA	2 cut(s)	1376, 1626
MseI	TTAA	5 cut(s)	6, 908, 1040, 1271, 1511
MslI	CAYNNNNRTG	1 cut(s)	1476
Msp20I	TGGCCA	2 cut(s)	1376, 1626
MspI	CCGG	9 cut(s)	96, 252, 355, 606, 639, 713, 922, 1556, 1705
MspR9I	CCNGG	6 cut(s)	607, 633, 923, 1219, 1556, 1604
MunI	CAATTG	1 cut(s)	1227
MvaI	CCWGG	3 cut(s)	633, 1219, 1604
MvnI	CGCG	2 cut(s)	194, 546
MwoI	GCNNNNNNNGC	3 cut(s)	148, 310, 585
NciI	CCSGG	3 cut(s)	607, 923, 1556
NcoI	CCATGG	1 cut(s)	654
NdeII	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
NlaIII	CATG	6 cut(s)	588, 658, 938, 949, 1151, 1375
NlaIV	GGNNCC	5 cut(s)	250, 359, 525, 637, 711
NmeAIII	GCCGAG	1 cut(s)	339
NmuCI	GTSAC	3 cut(s)	26, 1401, 1654
NruI	TCGCGA	1 cut(s)	194
NsiI	ATGCAT	2 cut(s)	590, 1153
NspI	RCATGY	1 cut(s)	1151
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 302
PdmI	GAANNNNTTC	2 cut(s)	404, 1295
PfoI	TCCNGGA	1 cut(s)	1217
PkrI	GCNGC	4 cut(s)	545, 1180, 1183, 1465
PleI	GAGTC	2 cut(s)	162, 259
PpsI	GAGTC	2 cut(s)	162, 259
PsiI	TTATAA	2 cut(s)	1061, 1451
Psp1406I	AACGTT	1 cut(s)	207
Psp6I	CCWGG	3 cut(s)	631, 1217, 1602
PspGI	CCWGG	3 cut(s)	631, 1217, 1602
PspN4I	GGNNCC	5 cut(s)	250, 359, 525, 637, 711
PspPI	GGNCC	4 cut(s)	288, 523, 636, 1606
PsuI	RGATCY	3 cut(s)	89, 128, 248
RruI	TCGCGA	1 cut(s)	194
RsaI	GTAC	1 cut(s)	736
RsaNI	GTAC	1 cut(s)	735
RseI	CAYNNNNRTG	1 cut(s)	1476
SaqAI	TTAA	5 cut(s)	6, 908, 1040, 1271, 1511
SatI	GCNGC	4 cut(s)	544, 1179, 1182, 1464
Sau3AI	GATC	6 cut(s)	89, 128, 248, 1012, 1084, 1366
Sau96I	GGNCC	4 cut(s)	288, 523, 636, 1606
SchI	GAGTC	2 cut(s)	163, 259
ScrFI	CCNGG	6 cut(s)	607, 633, 923, 1219, 1556, 1604
SduI	GDGCHC	2 cut(s)	933, 1460
SfaNI	GCATC	2 cut(s)	1193, 1224
SfcI	CTRYAG	1 cut(s)	1500
SinI	GGWCC	3 cut(s)	288, 523, 636
SmiMI	CAYNNNNRTG	1 cut(s)	1476
SmlI	CTYRAG	4 cut(s)	423, 967, 1094, 1724
SmoI	CTYRAG	4 cut(s)	423, 967, 1094, 1724
SsiI	CCGC	4 cut(s)	255, 277, 544, 624
StyD4I	CCNGG	6 cut(s)	605, 631, 921, 1217, 1554, 1602
StyI	CCWWGG	1 cut(s)	654
TaaI	ACNGT	4 cut(s)	523, 535, 734, 1135
TaiI	ACGT	1 cut(s)	210
TaqI	TCGA	2 cut(s)	216, 1002
TatI	WGTACW	1 cut(s)	734
TauI	GCSGC	1 cut(s)	546
Tru1I	TTAA	5 cut(s)	6, 908, 1040, 1271, 1511
Tru9I	TTAA	5 cut(s)	6, 908, 1040, 1271, 1511
TscAI	CASTG	3 cut(s)	370, 1138, 1627
TseFI	GTSAC	3 cut(s)	26, 1401, 1654
TseI	GCWGC	3 cut(s)	1178, 1181, 1463
Tsp45I	GTSAC	3 cut(s)	26, 1401, 1654
TspDTI	ATGAA	7 cut(s)	161, 176, 323, 350, 934, 1266, 1686
TspGWI	ACGGA	3 cut(s)	133, 178, 1466
TspRI	CASTG	3 cut(s)	370, 1138, 1627
VpaK11BI	GGWCC	3 cut(s)	288, 523, 636
XapI	RAATTY	2 cut(s)	1273, 1571
XceI	RCATGY	1 cut(s)	1151
XmiI	GTMKAC	1 cut(s)	976
XmnI	GAANNNNTTC	2 cut(s)	404, 1295
Zsp2I	ATGCAT	2 cut(s)	590, 1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.