Prupe.8G270500_v2.0.a1

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
22443417 .. 22449126
5710 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G270500.2

Sequence Viewer

Length: 3708 bp
ATGTCGGAGGGCAATTCTCCGTCGAAAACGTTTCTCGGCGTCCGTTTCATTCTCTTGGGATTCGACCCCCTTCACGAGCAAAAGGTTCGATCTAAGCTTGTGGGTTGTGGCGCAGTGGATGTCGGCCACTATTCCCCGAATTGCAGTCATGTGGTTGTGGATAAAACTGTGTTTGATGATCCCATATGTGTTGCTGCTCGAAATGACGGCAAAACACTTGTCACGGCTTTATGGGTTCATCATAGTTTTGATGTCGGAGTGCCCGTTGAGTCTACTTCTATTATATACAGACCTCTTAAAGATTTGAATGGTATTCCGGATGCCAAGAGTTTAATTGTATGCTTGACTGGATATCAGCGACAAGATAGAGATGACATTATGACAATGGTGGGTTTAATGGGTGCTCAATTTTCTAAGCCCTTGGTGGCAAACAAAGTCACTCATCTCATATGCTACAAATTTGAGGGGGAGAAGTATGAACTTGCCAAGAAAATCCCAAAGATAAAGCTGGTCAACCATCACTGGTTGGAAGATTGCTTAAGGGATTGGGCGCTCCTTCCTGAAGATGATTATAACAAGAGTGGCTATGAGATGGAGATGATGGAAGCTGAGGCTAGAGATTCAGAAGATGAGGCCGAAAACACCATTATGAAGCAATCTGGGGGGAGAAACATGTATAAGAGTCCTATTAATATAAAAAGTCCCCCAGCAACATCTGGAATGCCTAAATCAGAAGGAGACGTGCCTAAGGTTCCCATGAATTTTTATAATGCTATGGACCATGTATCGATTCCTCAGAATGAGAATAAATTAGGTCAAGCCTCAAGCTTTTCTAATGCTTACGTTTCCAACGGAGTAAGCTGTCAGAATGCATGCAAATTTAGGGATGGTACAGATGGTGAGCTAAATGACCAACATCACAGAACTCCAGATCCTAAGGTGAGAGATGATTTGACATCTAATTTTGGAACTGCTGAAAGGCCTGCTCATTCTGCTAGGACCCTAAGCTACTCAAGGCAAACCCCATTGAAGTCAACACTTCCACTGCACGTGGGAGATAAATCAAGCAATGGAAGTGTGTCTTCTAAAGTACCCATTTGCAAATCAAATGCCAAATTTGGTTTAGCCTCTTATACCTTTAAGGCAGATCAAGAAAATTACAAAATTGACTCCAGTTGTGTTGAAGTCCCCTTAAAAAGAATTCATTCACAGAATGGAGAAGAATCAAGTGGTATATTGCCTCGGAAAAGGACGATGGATCTTTCTCATGATAGCTCCAAATCACAGAAGATGAATCATGATGCAGAAGCAGGCATTATTTGTAGTCCTTCATCAAGTGATAAATCTCCAAAAGCAAAGCCAACATCTATGGTTGATGGTTCATATGAGACTACTAGCCATTATGTCATCAGAAATGATGACCACTCTCTGGATAAGACTGTCAATTTGAATGCTGTAGAAAGCTCATATGCTGGTACTTCACCAATCAAATCATCTACTGTTATCTGGAAGCCATTGGCATGTGATCTGCCTTTCTCTGCAACTGTGACCTCTGAGACAGCGGAAGATGGAAATGGCAACAAGAAAACACCTCCAACAACTTTTCAAAGATCAACAAAGTCCAGCTTAACGAGCAAGGCTGGCATTGTAGATTGTGTTGTGGAAAAACCGACATTTGCAGTCAGCAAAACAGTGGAACTGCAAAATCAGCATCAAGATGTTGAGGGTCTGTCTTCAAATAACAAAAAGTCAGTGACTAATAATTCCAATGACCCTGCTAGTTTGAACTTGCTTAAATATGGAAATAATCACTTAGATACACAATCAGTAAGCAAGAGGACGATTTCCAAGAAGATCCTGGTTTCTAGGCCTAAGTTAACTTCTGCTAACCAAAAGGGGTCTGTGTGCTTAGGTGTAGATGCCTCCTTAAATGATACCACTTTTCATTTAAATTCAGGGGACCATGAGAAATCCCCTCTTGACATGCTTTATCCAGGTGCTACTGCGGAACCCCCAAAGGAGGTGGAGGGAAAAGATGTTACCATGACTGCAGATGTTGCTGAGAATAATATTCAATCTATGGATGATGAAACTGAGGCTCCTGAGGAAGAAAGTGAACATAAGTTAGAGAATGTTCTTCATGAAGCAAAGGCTATAGGGGTTCAATCCACAAGTAAATGTGTCACTACTGAAGAGAAATCGGAAGGGATGCAGCAGATATCAGATCACTCTGATGCCTGTGTTCATGGTGATGCAATGGCCTCAGCAGAAAATACAGATGGAAATGAACGAGAAACGACAGTTTCTGACAGGATTTCCTTGCTGGTTGAGTCAAGCTCAGAAGGAGACGGTGTCAAAGGAAAGAAGAACAAGGGGAAAAGGCGTGCTTTGGGTAAAACCAAGTTTAAAGCTGTTCCTGCTGTGGCTGATGTCATGAAACCTAACAAATTTGTCTGTGATGAAGATACTCAGAATGAGAATATTGGGGAGACAGAGAAGGAACTGGAAAAAATAGTAGGCAAATCTAAGTGCCGTAGTGTGCCCAAAAATAAGTTAGAGAACTCTTCCAAAATGAAGGAAAACAGGCCGATTGTTTGTGGGGATCAATCTGTAAGTACGGCCGAACAGCAGGCAGGAAAATCAACTGTTAAATCTAATATAACTCCATTGAAGATAAATCAGACATCTGTAGAGACCAGTCCTAATTCTTCAATACCAGAGGGGAAGGCTCCAAGCAAAGTTAAAACTGAACCTGTATGGTTTATTTTGAGTGGGGACAAATTTCAAAGAAAGGACTTTCGGCAAGTTATCAGGTGTTTGAAAGGAAGATGTTGCCGTGATTCTCATCACTGGTCTTACCAGGCAACACACTTCATAGCTCCAGGTCCAATAAAGAGGACGGAGAAGTTTTTCGCTGCTACAGCATCTGGAAGGTGGATTCTTAAGAGTGATTATTTGGCAGCTAGTAATCAGGCAGGAAGATTTTTGGCAGAGGAACCTTATGAATGGCACCAGAATGGCCTTAGTGAAGACGGTGCAATCAATTTGGAGGCTCCAAGGAAGTGGCGGCTCTTGAGAGAGAGAACAGGCCATGGTGCCTTCCACGGAATGCGCATTATCATATACGGTGAATGTATTGCACCACCTTTGGATACTCTGAAGCGTGTTGTGAAGGCTGGTGACGGGACAATATTGGCAACTTGTCCTCCTTACACTCGATTCCTTGACTCGGGGGTTGACTTTGCCATTGTCAGCCCAGGCATGCCACGGGTCGATATGTGGGTACAAGAGTTCTTGAAACATGAGATACCTTGCGTTGCAACAGATTACTTGGTTGAGTATGTGTGCAAACCTGGGTACCCACTTGAAAGACATGTGCTGCACAATACTCATGCATGGGCAGAAAATTCGTTTGGGAGGCTGCAGAGGAGGGCAGAAGAGATTGTCGAAGACATTTTTGCACCTCGGGATAATTCTGGTAGTAGTGATATACCTTGCGTGGTTTGCGGATCTGTAGAGAGAGGAGAGGTAATGCTGATATGTGGCAACGAAAGCGGTTCTGTTGGCTGTGGGGTTGGTACTCATATTGACTGCTGCAATCCGCCACTTGAGGTTGTTCCGGAGGGTGATTGGTTTTGTCCGAAGTGTAGTCGGAGCAAAAACAGCACCAGCTCTTCCAAGAAAAGGAAAAAGGGTAAGAGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1236

Amino Acids

135.63

Weight (kDa)

6.78

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 573, 768
Acc16I TGCGCA 1 cut(s) 3113
Acc65I GGTACC 1 cut(s) 3357
AccB1I GGYRCC 3 cut(s) 3009, 3095, 3357
AccB7I CCANNNNNTGG 1 cut(s) 1429
AccI GTMKAC 1 cut(s) 272
AccIII TCCGGA 2 cut(s) 316, 3619
AciI CCGC 6 cut(s) 1562, 2006, 3067, 3507, 3555, 3602
AclI AACGTT 1 cut(s) 29
AclWI GGATC 6 cut(s) 173, 926, 1266, 1849, 2610, 3517
AcoI YGGCCR 2 cut(s) 124, 2619
AcsI RAATTY 9 cut(s) 458, 760, 878, 1115, 1200, 1951, 2447, 2780, 3406
AcuI CTGAAG 3 cut(s) 582, 2211, 3179
AcvI CACGTG 1 cut(s) 1051
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 7 cut(s) 892, 1092, 1477, 2617, 3285, 3359, 3580
AfiI CCNNNNNNNGG 4 cut(s) 1429, 2020, 3229, 3684
AflII CTTAAG 2 cut(s) 538, 2942
AflIII ACRYGT 2 cut(s) 672, 3373
AjiI CACGTC 1 cut(s) 742
AjnI CCWGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
AjuI GAANNNNNNNTTGG 2 cut(s) 3396, 3428
AloI GAACNNNNNNTCC 2 cut(s) 916, 948
Alw21I GWGCWC 1 cut(s) 406
Alw26I GTCTC 6 cut(s) 732, 1382, 1550, 2340, 2483, 2687
AlwI GGATC 6 cut(s) 173, 926, 1266, 1849, 2610, 3517
AlwNI CAGNNNCTG 2 cut(s) 2306, 2927
Ama87I CYCGRG 2 cut(s) 3229, 3465
Aor13HI TCCGGA 2 cut(s) 316, 3619
AoxI GGCC 9 cut(s) 124, 633, 980, 1868, 2259, 2585, 2619, 3019, 3088
ApeKI GCWGC 7 cut(s) 194, 2212, 2915, 2960, 3379, 3421, 3594
ApoI RAATTY 9 cut(s) 458, 760, 878, 1115, 1200, 1951, 2447, 2780, 3406
ArsI GACNNNNNNTTYG 4 cut(s) 204, 236, 1429, 1461
AseI ATTAAT 1 cut(s) 690
Asp700I GAANNNNTTC 2 cut(s) 1204, 2909
Asp718I GGTACC 1 cut(s) 3357
AspLEI GCGC 3 cut(s) 113, 553, 3114
AspS9I GGNCC 4 cut(s) 778, 999, 1960, 2885
AsuHPI GGTGA 7 cut(s) 911, 952, 1473, 2261, 3140, 3191, 3638
AvaI CYCGRG 2 cut(s) 3229, 3465
AvaII GGWCC 4 cut(s) 778, 999, 1960, 2885
AxyI CCTNAGG 3 cut(s) 747, 936, 2103
BaeGI GKGCMC 2 cut(s) 264, 2544
BaeI ACNNNNGTAYC 4 cut(s) 3275, 3308, 3341, 3374
BanI GGYRCC 3 cut(s) 3009, 3095, 3357
BauI CACGAG 1 cut(s) 74
BbrPI CACGTG 1 cut(s) 1051
BbsI GAAGAC 4 cut(s) 1074, 1725, 3036, 3456
Bbv12I GWGCWC 1 cut(s) 406
BbvCI CCTCAGC 2 cut(s) 609, 2263
BbvI GCAGC 7 cut(s) 181, 2224, 2902, 2972, 3366, 3408, 3581
BccI CCATC 9 cut(s) 525, 586, 595, 881, 890, 1249, 1370, 1562, 2273
BceAI ACGGC 5 cut(s) 223, 240, 2517, 2634, 2820
BcgI CGANNNNNNTGC 4 cut(s) 68, 102, 3390, 3424
BciT130I CCWGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
BciVI GTATCC 1 cut(s) 3145
BcoDI GTCTC 6 cut(s) 732, 1382, 1550, 2340, 2483, 2687
BfaI CTAG 6 cut(s) 615, 996, 1395, 1779, 1866, 2964
BfmI CTRYAG 7 cut(s) 1455, 2049, 2154, 2688, 2919, 3422, 3513
BfoI RGCGCY 1 cut(s) 554
BfrI CTTAAG 2 cut(s) 538, 2942
BfuI GTATCC 1 cut(s) 3145
BisI GCNGC 8 cut(s) 195, 2213, 2916, 2961, 3068, 3380, 3422, 3595
BlsI GCNGC 8 cut(s) 196, 2214, 2917, 2962, 3069, 3381, 3423, 3596
Bme1390I CCNGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
Bme18I GGWCC 4 cut(s) 778, 999, 1960, 2885
BmeT110I CYCGRG 2 cut(s) 3229, 3465
BmgBI CACGTC 1 cut(s) 742
BmgT120I GGNCC 4 cut(s) 778, 999, 1960, 2885
BmrFI CCNGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
BmsI GCATC 8 cut(s) 310, 1291, 1720, 1909, 2199, 2224, 2242, 2933
BpiI GAAGAC 4 cut(s) 1074, 1725, 3036, 3456
BplI GAGNNNNNCTC 2 cut(s) 2321, 2353
BpmI CTGGAG 3 cut(s) 912, 1156, 2865
Bpu10I CCTNAGC 4 cut(s) 609, 1004, 1909, 2263
BpuEI CTTGAG 4 cut(s) 808, 997, 3094, 3629
Bsa29I ATCGAT 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 1051
BsaBI GATNNNNATC 1 cut(s) 2844
BsaHI GRCGYC 1 cut(s) 39
BsaI GGTCTC 1 cut(s) 2687
BsaJI CCNNGG 9 cut(s) 420, 1241, 3056, 3091, 3103, 3256, 3266, 3353, 3464
BsaWI WCCGGW 2 cut(s) 316, 3619
BsaXI ACNNNNNCTCC 8 cut(s) 249, 279, 2083, 2113, 2337, 2367, 3190, 3220
Bsc4I CCNNNNNNNGG 4 cut(s) 1429, 2020, 3229, 3684
Bse1I ACTGG 6 cut(s) 352, 527, 1173, 2508, 2697, 2855
Bse21I CCTNAGG 3 cut(s) 747, 936, 2103
Bse3DI GCAATG 2 cut(s) 1075, 2262
Bse8I GATNNNNATC 1 cut(s) 2844
BseAI TCCGGA 2 cut(s) 316, 3619
BseBI CCWGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
BseCI ATCGAT 1 cut(s) 788
BseDI CCNNGG 9 cut(s) 420, 1241, 3056, 3091, 3103, 3256, 3266, 3353, 3464
BseGI GGATG 5 cut(s) 124, 325, 892, 2089, 2214
BseJI GATNNNNATC 1 cut(s) 2844
BseLI CCNNNNNNNGG 4 cut(s) 1429, 2020, 3229, 3684
BseMI GCAATG 2 cut(s) 1075, 2262
BseMII CTCAG 9 cut(s) 600, 809, 1545, 2052, 2085, 2094, 2277, 2352, 2483
BseNI ACTGG 6 cut(s) 352, 527, 1173, 2508, 2697, 2855
BseRI GAGGAG 2 cut(s) 3442, 3537
BseSI GKGCMC 2 cut(s) 264, 2544
BseX3I CGGCCG 1 cut(s) 2619
BseXI GCAGC 7 cut(s) 181, 2224, 2902, 2972, 3366, 3408, 3581
BseYI CCCAGC 1 cut(s) 706
BsgI GTGCAG 2 cut(s) 1031, 3365
Bsh1285I CGRYCG 1 cut(s) 2622
BshFI GGCC 9 cut(s) 126, 635, 982, 1870, 2261, 2587, 2621, 3021, 3090
BshNI GGYRCC 3 cut(s) 3009, 3095, 3357
BshVI ATCGAT 1 cut(s) 788
BsiEI CGRYCG 1 cut(s) 2622
BsiHKAI GWGCWC 1 cut(s) 406
BsiHKCI CYCGRG 2 cut(s) 3229, 3465
BsiSI CCGG 2 cut(s) 317, 3620
BslFI GGGAC 5 cut(s) 687, 1172, 1973, 2789, 3199
BslI CCNNNNNNNGG 4 cut(s) 1429, 2020, 3229, 3684
BsmAI GTCTC 6 cut(s) 732, 1382, 1550, 2340, 2483, 2687
BsmBI CGTCTC 2 cut(s) 732, 2340
BsmFI GGGAC 5 cut(s) 687, 1172, 1973, 2789, 3199
BsmI GAATGC 4 cut(s) 726, 874, 1456, 3114
BsnI GGCC 9 cut(s) 126, 635, 982, 1870, 2261, 2587, 2621, 3021, 3090
Bso31I GGTCTC 1 cut(s) 2687
BsoBI CYCGRG 2 cut(s) 3229, 3465
Bsp1286I GDGCHC 3 cut(s) 264, 406, 2544
Bsp13I TCCGGA 2 cut(s) 316, 3619
Bsp19I CCATGG 1 cut(s) 3091
BspACI CCGC 6 cut(s) 1562, 2006, 3067, 3507, 3555, 3602
BspANI GGCC 9 cut(s) 126, 635, 982, 1870, 2261, 2587, 2621, 3021, 3090
BspCNI CTCAG 9 cut(s) 601, 808, 1546, 2053, 2086, 2095, 2276, 2351, 2482
BspDI ATCGAT 1 cut(s) 788
BspEI TCCGGA 2 cut(s) 316, 3619
BspHI TCATGA 4 cut(s) 1267, 1297, 2140, 2433
BspMAI CTGCAG 2 cut(s) 2053, 3426
BspPI GGATC 6 cut(s) 173, 926, 1266, 1849, 2610, 3517
BspQI GCTCTTC 1 cut(s) 3679
BspT107I GGYRCC 3 cut(s) 3009, 3095, 3357
BspTI CTTAAG 2 cut(s) 538, 2942
BspTNI GGTCTC 1 cut(s) 2687
BsrDI GCAATG 2 cut(s) 1075, 2262
BsrI ACTGG 6 cut(s) 352, 527, 1173, 2508, 2697, 2855
BssECI CCNNGG 9 cut(s) 420, 1241, 3056, 3091, 3103, 3256, 3266, 3353, 3464
BssNI GRCGYC 1 cut(s) 39
BssSI CACGAG 1 cut(s) 74
BssT1I CCWWGG 3 cut(s) 420, 3056, 3091
Bst2BI CACGAG 1 cut(s) 74
Bst2UI CCWGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
Bst6I CTCTTC 4 cut(s) 2187, 2569, 3432, 3679
BstACI GRCGYC 1 cut(s) 39
BstAFI CTTAAG 2 cut(s) 538, 2942
BstAPI GCANNNNNTGC 1 cut(s) 2057
BstBAI YACGTR 1 cut(s) 1051
BstC8I GCNNGC 7 cut(s) 874, 984, 1312, 1642, 2385, 2631, 3263
BstDSI CCRYGG 3 cut(s) 3091, 3103, 3266
BstF5I GGATG 5 cut(s) 124, 325, 892, 2089, 2214
BstH2I RGCGCY 1 cut(s) 554
BstHHI GCGC 3 cut(s) 113, 553, 3114
BstMAI GTCTC 6 cut(s) 732, 1382, 1550, 2340, 2483, 2687
BstMCI CGRYCG 1 cut(s) 2622
BstNI CCWGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
BstNSI RCATGY 6 cut(s) 676, 876, 1524, 1987, 3265, 3377
BstSCI CCNGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
BstSFI CTRYAG 7 cut(s) 1455, 2049, 2154, 2688, 2919, 3422, 3513
BstSLI GKGCMC 2 cut(s) 264, 2544
BstV1I GCAGC 7 cut(s) 181, 2224, 2902, 2972, 3366, 3408, 3581
BstV2I GAAGAC 4 cut(s) 1074, 1725, 3036, 3456
BstX2I RGATCY 4 cut(s) 931, 1258, 1854, 3509
BstXI CCANNNNNNTGG 1 cut(s) 3063
BstYI RGATCY 4 cut(s) 931, 1258, 1854, 3509
BstZI CGGCCG 1 cut(s) 2619
Bsu15I ATCGAT 1 cut(s) 788
Bsu36I CCTNAGG 3 cut(s) 747, 936, 2103
BsuI GTATCC 1 cut(s) 3145
BsuRI GGCC 9 cut(s) 126, 635, 982, 1870, 2261, 2587, 2621, 3021, 3090
BsuTUI ATCGAT 1 cut(s) 788
BtgI CCRYGG 3 cut(s) 3091, 3103, 3266
BtrI CACGTC 1 cut(s) 742
BtsCI GGATG 5 cut(s) 124, 325, 892, 2089, 2214
BtsI GCAGTG 2 cut(s) 120, 1043
BtsIMutI CAGTG 6 cut(s) 120, 520, 1043, 1698, 1758, 2848
Cac8I GCNNGC 7 cut(s) 874, 984, 1312, 1642, 2385, 2631, 3263
CaiI CAGNNNCTG 2 cut(s) 2306, 2927
CciI TCATGA 4 cut(s) 1267, 1297, 2140, 2433
CfoI GCGC 3 cut(s) 113, 553, 3114
Cfr13I GGNCC 4 cut(s) 778, 999, 1960, 2885
ClaI ATCGAT 1 cut(s) 788
CseI GACGC 1 cut(s) 28
Csp6I GTAC 7 cut(s) 891, 1091, 1476, 2616, 3284, 3358, 3579
CspCI CAANNNNNGTGG 2 cut(s) 2004, 2039
CviQI GTAC 7 cut(s) 891, 1091, 1476, 2616, 3284, 3358, 3579
DraI TTTAAA 2 cut(s) 1950, 2407
EaeI YGGCCR 2 cut(s) 124, 2619
EagI CGGCCG 1 cut(s) 2619
Eam1104I CTCTTC 4 cut(s) 2187, 2569, 3432, 3679
EarI CTCTTC 4 cut(s) 2187, 2569, 3432, 3679
EciI GGCGGA 1 cut(s) 3591
EclXI CGGCCG 1 cut(s) 2619
Eco130I CCWWGG 3 cut(s) 420, 3056, 3091
Eco147I AGGCCT 2 cut(s) 982, 1870
Eco31I GGTCTC 1 cut(s) 2687
Eco32I GATATC 2 cut(s) 353, 2220
Eco47I GGWCC 4 cut(s) 778, 999, 1960, 2885
Eco52I CGGCCG 1 cut(s) 2619
Eco57I CTGAAG 3 cut(s) 582, 2211, 3179
Eco72I CACGTG 1 cut(s) 1051
Eco81I CCTNAGG 3 cut(s) 747, 936, 2103
Eco88I CYCGRG 2 cut(s) 3229, 3465
EcoO109I RGGNCCY 1 cut(s) 999
EcoRI GAATTC 1 cut(s) 1200
EcoRII CCWGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
EcoRV GATATC 2 cut(s) 353, 2220
EcoT14I CCWWGG 3 cut(s) 420, 3056, 3091
EcoT22I ATGCAT 2 cut(s) 874, 3397
ErhI CCWWGG 3 cut(s) 420, 3056, 3091
Esp3I CGTCTC 2 cut(s) 732, 2340
FalI AAGNNNNNCTT 6 cut(s) 1066, 1098, 1610, 1642, 2371, 2403
FaqI GGGAC 5 cut(s) 687, 1172, 1973, 2789, 3199
FauNDI CATATG 4 cut(s) 185, 449, 1384, 1468
FblI GTMKAC 1 cut(s) 272
Fnu4HI GCNGC 8 cut(s) 195, 2213, 2916, 2961, 3068, 3380, 3422, 3595
FokI GGATG 5 cut(s) 131, 332, 899, 2096, 2221
Fsp4HI GCNGC 8 cut(s) 195, 2213, 2916, 2961, 3068, 3380, 3422, 3595
FspAI RTGCGCAY 1 cut(s) 3113
FspBI CTAG 6 cut(s) 615, 996, 1395, 1779, 1866, 2964
FspI TGCGCA 1 cut(s) 3113
GlaI GCGC 3 cut(s) 112, 552, 3113
GluI GCNGC 8 cut(s) 195, 2213, 2916, 2961, 3068, 3380, 3422, 3595
GsaI CCCAGC 1 cut(s) 710
GsuI CTGGAG 3 cut(s) 912, 1156, 2865
HaeII RGCGCY 1 cut(s) 554
HaeIII GGCC 9 cut(s) 126, 635, 982, 1870, 2261, 2587, 2621, 3021, 3090
HapII CCGG 2 cut(s) 317, 3620
HgaI GACGC 1 cut(s) 28
HhaI GCGC 3 cut(s) 113, 553, 3114
Hin1I GRCGYC 1 cut(s) 39
Hin6I GCGC 3 cut(s) 111, 551, 3112
HinP1I GCGC 3 cut(s) 111, 551, 3112
HincII GTYRAC 4 cut(s) 514, 1035, 1878, 3238
HindII GTYRAC 4 cut(s) 514, 1035, 1878, 3238
HindIII AAGCTT 2 cut(s) 95, 826
HpaI GTTAAC 1 cut(s) 1878
HpaII CCGG 2 cut(s) 317, 3620
HphI GGTGA 7 cut(s) 911, 952, 1473, 2261, 3140, 3191, 3638
Hpy166II GTNNAC 6 cut(s) 273, 514, 1035, 1878, 2117, 3238
Hpy8I GTNNAC 6 cut(s) 273, 514, 1035, 1878, 2117, 3238
Hpy99I CGWCG 1 cut(s) 25
HpyCH4IV ACGT 4 cut(s) 29, 741, 843, 1050
HpySE526I ACGT 4 cut(s) 29, 741, 843, 1050
Hsp92I GRCGYC 1 cut(s) 39
HspAI GCGC 3 cut(s) 111, 551, 3112
Kpn2I TCCGGA 2 cut(s) 316, 3619
KpnI GGTACC 1 cut(s) 3361
KspAI GTTAAC 1 cut(s) 1878
LguI GCTCTTC 1 cut(s) 3679
LmnI GCTCC 7 cut(s) 558, 1280, 2104, 2734, 2884, 3058, 3654
Lsp1109I GCAGC 7 cut(s) 181, 2224, 2902, 2972, 3366, 3408, 3581
LweI GCATC 8 cut(s) 310, 1291, 1720, 1909, 2199, 2224, 2242, 2933
MaeI CTAG 6 cut(s) 615, 996, 1395, 1779, 1866, 2964
MaeII ACGT 4 cut(s) 29, 741, 843, 1050
MaeIII GTNAC 7 cut(s) 220, 436, 1546, 1753, 2038, 2182, 3179
MflI RGATCY 4 cut(s) 931, 1258, 1854, 3509
MhlI GDGCHC 3 cut(s) 264, 406, 2544
MlyI GAGTC 5 cut(s) 278, 691, 1163, 2339, 3221
MmeI TCCRAC 5 cut(s) 235, 507, 873, 1619, 3632
Mph1103I ATGCAT 2 cut(s) 874, 3397
MroI TCCGGA 2 cut(s) 316, 3619
MroXI GAANNNNTTC 2 cut(s) 1204, 2909
MslI CAYNNNNRTG 6 cut(s) 647, 1519, 1716, 2232, 2250, 3015
MspA1I CMGCKG 1 cut(s) 1562
MspCI CTTAAG 2 cut(s) 538, 2942
MspI CCGG 2 cut(s) 317, 3620
MspR9I CCNGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
Mva1269I GAATGC 4 cut(s) 726, 874, 1456, 3114
MvaI CCWGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
NcoI CCATGG 1 cut(s) 3091
NdeI CATATG 4 cut(s) 185, 449, 1384, 1468
NmeAIII GCCGAG 1 cut(s) 15
NmuCI GTSAC 6 cut(s) 220, 436, 1546, 1753, 2182, 3179
NsbI TGCGCA 1 cut(s) 3113
NsiI ATGCAT 2 cut(s) 874, 3397
NspI RCATGY 6 cut(s) 676, 876, 1524, 1987, 3265, 3377
PaeI GCATGC 2 cut(s) 876, 3265
PagI TCATGA 4 cut(s) 1267, 1297, 2140, 2433
PceI AGGCCT 2 cut(s) 982, 1870
PciI ACATGT 2 cut(s) 672, 3373
PciSI GCTCTTC 1 cut(s) 3679
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PctI GAATGC 4 cut(s) 726, 874, 1456, 3114
PdmI GAANNNNTTC 2 cut(s) 1204, 2909
PfeI GAWTC 8 cut(s) 60, 620, 790, 1223, 1294, 2840, 2938, 3219
PflFI GACNNNGTC 1 cut(s) 2351
PflMI CCANNNNNTGG 1 cut(s) 1429
PkrI GCNGC 8 cut(s) 196, 2214, 2917, 2962, 3069, 3381, 3423, 3596
PleI GAGTC 5 cut(s) 277, 690, 1163, 2338, 3221
PmaCI CACGTG 1 cut(s) 1051
PmlI CACGTG 1 cut(s) 1051
PpsI GAGTC 5 cut(s) 277, 690, 1163, 2338, 3221
Ppu21I YACGTR 1 cut(s) 1051
PpuMI RGGWCCY 1 cut(s) 999
PscI ACATGT 2 cut(s) 672, 3373
PshBI ATTAAT 1 cut(s) 690
PsiI TTATAA 2 cut(s) 573, 768
Psp1406I AACGTT 1 cut(s) 29
Psp5II RGGWCCY 1 cut(s) 999
Psp6I CCWGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
PspCI CACGTG 1 cut(s) 1051
PspFI CCCAGC 1 cut(s) 706
PspGI CCWGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
PspPI GGNCC 4 cut(s) 778, 999, 1960, 2885
PspPPI RGGWCCY 1 cut(s) 999
PstI CTGCAG 2 cut(s) 2053, 3426
PstNI CAGNNNCTG 2 cut(s) 2306, 2927
PsuI RGATCY 4 cut(s) 931, 1258, 1854, 3509
PsyI GACNNNGTC 1 cut(s) 2351
RsaI GTAC 7 cut(s) 892, 1092, 1477, 2617, 3285, 3359, 3580
RsaNI GTAC 7 cut(s) 891, 1091, 1476, 2616, 3284, 3358, 3579
RseI CAYNNNNRTG 6 cut(s) 647, 1519, 1716, 2232, 2250, 3015
SapI GCTCTTC 1 cut(s) 3679
SatI GCNGC 8 cut(s) 195, 2213, 2916, 2961, 3068, 3380, 3422, 3595
Sau96I GGNCC 4 cut(s) 778, 999, 1960, 2885
SchI GAGTC 5 cut(s) 278, 691, 1163, 2339, 3221
ScrFI CCNGG 6 cut(s) 1859, 1995, 2861, 2883, 3258, 3354
SduI GDGCHC 3 cut(s) 264, 406, 2544
SfaNI GCATC 8 cut(s) 310, 1291, 1720, 1909, 2199, 2224, 2242, 2933
SfcI CTRYAG 7 cut(s) 1455, 2049, 2154, 2688, 2919, 3422, 3513
SinI GGWCC 4 cut(s) 778, 999, 1960, 2885
SmiI ATTTAAAT 1 cut(s) 1950
SmiMI CAYNNNNRTG 6 cut(s) 647, 1519, 1716, 2232, 2250, 3015
SmlI CTYRAG 6 cut(s) 538, 823, 1012, 2942, 3073, 3608
SmoI CTYRAG 6 cut(s) 538, 823, 1012, 2942, 3073, 3608
SphI GCATGC 2 cut(s) 876, 3265
SseBI AGGCCT 2 cut(s) 982, 1870
SsiI CCGC 6 cut(s) 1562, 2006, 3067, 3507, 3555, 3602
SspI AATATT 3 cut(s) 2071, 2482, 3192
SspMI CTAG 6 cut(s) 615, 996, 1395, 1779, 1866, 2964
StuI AGGCCT 2 cut(s) 982, 1870
StyD4I CCNGG 6 cut(s) 1857, 1993, 2859, 2881, 3256, 3352
StyI CCWWGG 3 cut(s) 420, 3056, 3091
SwaI ATTTAAAT 1 cut(s) 1950
TaiI ACGT 4 cut(s) 32, 744, 846, 1053
TaqI TCGA 8 cut(s) 23, 63, 88, 199, 788, 3217, 3273, 3447
TauI GCSGC 1 cut(s) 3070
TfiI GAWTC 8 cut(s) 60, 620, 790, 1223, 1294, 2840, 2938, 3219
TscAI CASTG 6 cut(s) 120, 527, 1050, 1698, 1758, 2855
TseFI GTSAC 6 cut(s) 220, 436, 1546, 1753, 2182, 3179
TseI GCWGC 7 cut(s) 194, 2212, 2915, 2960, 3379, 3421, 3594
Tsp45I GTSAC 6 cut(s) 220, 436, 1546, 1753, 2182, 3179
TspGWI ACGGA 5 cut(s) 9, 32, 867, 2915, 3120
TspRI CASTG 6 cut(s) 120, 527, 1050, 1698, 1758, 2855
Tth111I GACNNNGTC 1 cut(s) 2351
Van91I CCANNNNNTGG 1 cut(s) 1429
Vha464I CTTAAG 2 cut(s) 538, 2942
VpaK11BI GGWCC 4 cut(s) 778, 999, 1960, 2885
VspI ATTAAT 1 cut(s) 690
XapI RAATTY 9 cut(s) 458, 760, 878, 1115, 1200, 1951, 2447, 2780, 3406
XceI RCATGY 6 cut(s) 676, 876, 1524, 1987, 3265, 3377
XcmI CCANNNNNNNNNTGG 1 cut(s) 1855
XmiI GTMKAC 1 cut(s) 272
XmnI GAANNNNTTC 2 cut(s) 1204, 2909
XspI CTAG 6 cut(s) 615, 996, 1395, 1779, 1866, 2964
Zsp2I ATGCAT 2 cut(s) 874, 3397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.