RchiOBHm_Chr7g0241761

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
67791101 .. 67796777
5677 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21666

Sequence Viewer

Length: 4122 bp
ATGATGGAGAGCCGTGCTCCGCCGCCCAAAACGTTTCTGGGCGTCCGTTTCGTTCTCTTGGGTTTCGACCCCATGAACGAACGCCAGGTTCGATCTAAGCTGCTAGATTGCGGTGGATCTGATGTCGGTCTCTATTCCCCAAACTGCACTCACCTCATTGTGGATAGGATTACCTATGATCATCCTGTATGTGTTGCTGCTCGAAACGACGGCAAAACGGTTGTCACGGCTTTGTGGGTTCACCATAGTTTTGATGTTGGAATGCCCCTTGATGCCGCTGCTATTATATACAGGCCTCTCAAGCATTTGAATGGTATTCCTGGTGCCAAGAATTTACTGATGTGCTTGACTGGATATCATGGACAAGATAGAGATGACATTATGACAATGGTTGGTTTAATGGGTGCTCAGTTTTCTAAACCATTGGTGGCAAGCAAAGTCACTCATCTCATTTGCTACAAATTTGAAGGGGACAAGTATAAACTTGCCAAACAACTCCCTCAGATTAAGATTGTCAATCATCGCTGGTTGGAAGATTGCTTAAGGGATTGGGTTCTTCTTCAGGAAGATAAATATAACCAGAGTGGCTATGAGTTGGAGATAATGGAGGCTGAGGCTAGGGATTCTGAAGATGAGGCTGAAGACACCTTTATAAAGCAATCTGTTGGGAGAAGCATGAATAAGAGTTGCCACAATATACAGGCTGGTTCTCCAGTTCCTTTTCGAATTCCGAAGTCAGAAGGAGAGGTGACTATGGTTCCCCAAAATTCTGTTGAGAAATCTATTTCTCGGAATGAAGATGAATTTGATCAAGCTTCAAGATTTTTTGACGTTCACGTTTCCAAGGTACCTAGCCCTCAGGATGCATGTAAATTTAAAGATGCTCCACTTGGTGAGCATAATGACCTCCATCACACAACTCCAGATTCTAAGAAGAAAGATGACATGGCATCTACATTTGGATCTGCTGAAAGGTCACCCCCTCATTCTGATAGGAAACTAAGCTACTCCAGGCAATCACCATGGAAATCCACACTTCCATTATACTTGGGAGATAAATCAAGCTATGGAAGTAGGTCGTCTAAAGCGCCTATTCGCAAGTTAAGTGTCAATGATGATTTTGCCTCTTCTCCCTTCAGGGCGGAAGAAAATGAAAAAATTGACTCTAATTGTGTGGAAGCTCTCGTGAAAGGAAATCATGTACACAATGAAGAAGAGTCAACTGGTATATTGCCACAAAAATGGACACCAGATCATTCTTATGCAAGCCCCAAATTACAGAAGACAAGTTATGATGCAAAGTCAAGCATTGTGAGAAGTCCAACATGTGATACATCCCCCAAAGAAATACCAGCATCTTTGATTGATCGTTCATATAAGACTACTAGTCATTGTATTAACAGATGTGATGAAAAATCTCTGCATAAGACTACGACGTGTTTGAATGCTGCAGAAACCTCAGGTGCTGTTGTGTCACCAACAAAATCATCTACTTTAACCAAGAAGTCATTGACATGTGACGTGCCTTCCTCCACGACTCTGATCTCAGAGATCGGCCATGATGGCAATGTCAACAAGAAAACACCTCTATCCACATTTCAGAGGTTAAGAAAGTCCCCCTTATCCAGCAAGCCTGGCATTGGAGATTTGGCAATGGAAGAATCTACAACTACAGTGAGCGAAACATTGGAACCACAAAATCAGCAACAAGATGTTCAGGGTTCATCTCCAAGAAACGAACTGTCGGTGATTAATAATTCCAACGACCTTGCTAACTTGGACCTGCATAAAGGTGGAACTGATGACTCGACAAAATCAGATAGGAAGAAGATGCTCTCCAAGAAGACTCTAGGTTCTAGGCCGAAGTTAACTTCAGCAAACCTCAAGTTTTCTGTTTACTTGGATGAAGATGCCTCCTTAAATGTTGCCACTGTTGATACCAATGCAGCAGATCAGGAGAAACCCCCCACTGCCTTAAAGCCTGATCTGCTTTCTCCAGATGTTAGTGTAAAAGCACTGAAGATGGCAGAGGTTAAAGATGTTACTACATCTGGAAATGTTTCTGAGAGTAAAATCGACTCTCTGGATGATGAAACTGAGGCTCCTGCAGAAGAAGATCAACATGAATTAGAGAGTATACTTGAAGCAAAAATGACAGAGAAATCAGAAGGGGTGCAGCATATGTCAAATTACTCCAATCCCCGTGTTCAAGGTGATGCAATGGCCTCAGGGGAAAATATGCAAGAAAATGAACAAGCAGAGACAGTTTCTGTGCTGGTTGAATCAACCTCAAATGGAGTTGGTGATAAAGGGAAGAAGAACAGTGGGAGAAAGCGTCGTTTGGGTAAAACTAAGTTGAAGACTGTTCCTGCCGTCACTGATAAAATGAACTCACGGAAAGGTGTCTCTGAGGATTTATTAAATCACTCCGATCCCTGTGTCCATGGTGATGGAATGGCCTCGATGGGAAATATGCAAGAAAATGAACAAGGAGAATCAATTTCTGTGCTGGTTGAATCAACCTCAAAAGGAGTTGGTGTTATAGGAAAGAAGAACAGTGGGAAAAAGGGTCCTTTGGGTAAAACTAAGTTGAAGACTGTTCCTGCCGTCACTGATAAAATGAACTCAGAGAAAGGTGTCTCTGAGGATATATTAAATCACTCCAAGCCCTGTGTCCATGGTGATTTAATGGCCTCAGTGGAAAAGATAAAAGGAAATGAACAAGGAGAGTCAGTTTCTATGCTGGTTGAAACAACCTCGAAAGGAGATGGTGCTAAAGGAAAGAAGAACTATGGGAAAAAGTGTCCTTTGGGCAGAACCAAGTTGAAGACTTCTCCTGCCGCCACTGAGACTGAGAACACTGAGGAGACAGAGATGGAAGAGGAAGGACTTGCATGTCCAGTAGGCAAATCTAAGTGCTGCAGTGAACCCAAAAGTAAGCCAGTGGACTCGTCTGAACTGAAGGAAAACAGGCCAATTGCTTGTGGAGATCAAAATATAAGCAAGGCAAAAGAGCAGGCAGAAAAGTCACATGTTAAATGTAATTATACTCCAATGGAGATCAATCAAAAGTTGGCGAAGATCAGTCGGAATTCTTCAATGCAAGAGGTGAAGGCTTCAGACAGAGTTAAAACTCAACCTGAATGGTTTATTTTGAGTGGACATCAGTTCGAAAGAAAGGAGTTTCAGCAAATTATCAAGCGCTTGAAGGGAAGGTGCTGCCGTGATTCACATAACTGGTCTTACCAGGCAACACATTTCATCATTCCAGGACCAATTCGCAGGATAGAAAAGTTTTTTGCTGCTGCAGCATCTGGAAGGTGGATTCTTAAAAGTGATTATTTGGCAGCTAGTAATCAGGCAGGAAAATTTGTGGCTGAGGAACCTTATGAATGGTACAAGAGTGGCCTAAGTGAAGATGGCACAATCAATTTAGAGGCTCCAAGAAAGTGGCGGCTCTTGAGAGAGAGAACAGGTCATGGTGCCTTTCATGGAATGCGCATTATTATATATGGTGACTGCATTGCACCACGTCTGGATACTCTGAAGCGCGTGGTGAAGGCTGGTGATGGGACAATATTAGCAACTTGTCCTCCTTACACCCGCTTCCTTAACTCGGGAGTCGACTTTGCCATTGTTAGCCCAGGCATGCCGCGTGTGGATATGTGGGTACAGGAGTTTTTAAAACATGAGATACCCTGTGTTGTAGCTGATTACTTGGTCGAGTACGTGTGCAAACCTGGATACCCCCTTGAGAGACATGTGCTATACAATACTCATGCTTGGGCAGAAAAGTCATTTAGCCGTCTGCAAAACAAGGCAGAAGAGGTTTTGGTTGTGGTGGAGGAAGAGGAGGAGAACCGTACATATACACCTATGGATGATTCTGGTAACAGTGATATACCCTGCGTGGTTTGCAGGTCTTGTGACAGAGGAGAGGTGATGCTGATATGTGGCAACGAAAGTGGCTCTGTTGGCTGTGGGATTGGCACTCATATTGACTGCTGCAGTCCGCCACTTGAAGATGTTCCAGAGGGTGACTGGTTCTGTCCAAAGTGTAGTAGCCAAAGCAAAAACGCCAGTAATCCCTCTAAGAAAAGGAAAAAGGGTAAGAGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1373

Amino Acids

151.42

Weight (kDa)

6.78

Isoelectric Point (pI)

44.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT PF00533 111 - 181 1.5e-09 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 112 - 176 2e-18 twin BRCT domain
BRCT PF00533 1051 - 1118 7e-06 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
AasI GACNNNNNNGTC 1 cut(s) 2895
Acc16I TGCGCA 1 cut(s) 3500
Acc36I ACCTGC 2 cut(s) 1791, 3909
Acc65I GGTACC 1 cut(s) 847
AccB1I GGYRCC 3 cut(s) 323, 847, 3482
AccI GTMKAC 2 cut(s) 2137, 3624
AccII CGCG 2 cut(s) 3552, 3655
AclI AACGTT 1 cut(s) 32
AclWI GGATC 3 cut(s) 124, 970, 2426
AcoI YGGCCR 1 cut(s) 1555
AcsI RAATTY 8 cut(s) 331, 461, 726, 766, 803, 872, 3091, 3368
AcuI CTGAAG 9 cut(s) 545, 648, 660, 1120, 1857, 2039, 2981, 3102, 3566
AcyI GRCGYC 1 cut(s) 42
AdeI CACNNNGTG 1 cut(s) 893
AfaI GTAC 6 cut(s) 849, 1203, 3398, 3672, 3728, 3865
AfeI AGCGCT 1 cut(s) 3203
AfiI CCNNNNNNNGG 3 cut(s) 160, 1640, 3616
AflII CTTAAG 1 cut(s) 541
AflIII ACRYGT 6 cut(s) 1325, 1436, 1514, 3031, 3729, 3760
AhdI GACNNNNNGTC 1 cut(s) 1386
AhlI ACTAGT 1 cut(s) 1385
AjiI CACGTC 3 cut(s) 1437, 1522, 3533
AjnI CCWGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
AluBI AGCT 7 cut(s) 100, 815, 1005, 1065, 1181, 3350, 3710
AluI AGCT 7 cut(s) 100, 815, 1005, 1065, 1181, 3350, 3710
Alw21I GWGCWC 2 cut(s) 19, 409
Alw26I GTCTC 7 cut(s) 134, 2255, 2410, 2644, 2843, 2861, 3751
AlwI GGATC 3 cut(s) 124, 970, 2426
AlwNI CAGNNNCTG 3 cut(s) 1466, 2270, 3314
Ama87I CYCGRG 1 cut(s) 3616
Aor51HI AGCGCT 1 cut(s) 3203
AoxI GGCC 8 cut(s) 293, 1555, 1859, 2223, 2457, 2691, 2972, 3406
ApoI RAATTY 8 cut(s) 331, 461, 726, 766, 803, 872, 3091, 3368
ArsI GACNNNNNNTTYG 2 cut(s) 207, 239
AseI ATTAAT 1 cut(s) 1752
Asp700I GAANNNNTTC 2 cut(s) 2059, 4026
Asp718I GGTACC 1 cut(s) 847
AspLEI GCGC 4 cut(s) 1090, 3204, 3501, 3552
AspS9I GGNCC 3 cut(s) 1780, 2570, 3272
AsuII TTCGAA 2 cut(s) 724, 3171
AvaI CYCGRG 1 cut(s) 3616
AvaII GGWCC 3 cut(s) 1780, 2570, 3272
AxyI CCTNAGG 3 cut(s) 858, 1459, 2227
BaeI ACNNNNGTAYC 4 cut(s) 3388, 3421, 3662, 3695
BanI GGYRCC 3 cut(s) 323, 847, 3482
BauI CACGAG 1 cut(s) 1184
BbsI GAAGAC 6 cut(s) 648, 1289, 1850, 2366, 2600, 2834
Bbv12I GWGCWC 2 cut(s) 19, 409
BbvCI CCTCAGC 2 cut(s) 612, 3378
BccI CCATC 9 cut(s) 918, 1556, 2017, 2444, 2458, 2762, 2869, 3413, 3563
BceAI ACGGC 6 cut(s) 226, 243, 2357, 2591, 3207, 3789
BciT130I CCWGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
BciVI GTATCC 2 cut(s) 3532, 3737
BclI TGATCA 2 cut(s) 178, 808
BcoDI GTCTC 7 cut(s) 134, 2255, 2410, 2644, 2843, 2861, 3751
BcuI ACTAGT 1 cut(s) 1385
BfaI CTAG 7 cut(s) 104, 618, 852, 1386, 1850, 1857, 3351
BfmI CTRYAG 6 cut(s) 1449, 1671, 2106, 2920, 3306, 4006
BfoI RGCGCY 2 cut(s) 1091, 3205
BfrI CTTAAG 1 cut(s) 541
BfuAI ACCTGC 2 cut(s) 1791, 3909
BfuI GTATCC 2 cut(s) 3532, 3737
BglI GCCNNNNNGGC 1 cut(s) 1563
Bme1390I CCNGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
Bme18I GGWCC 3 cut(s) 1780, 2570, 3272
BmeRI GACNNNNNGTC 1 cut(s) 1386
BmeT110I CYCGRG 1 cut(s) 3616
BmgBI CACGTC 3 cut(s) 1437, 1522, 3533
BmgT120I GGNCC 3 cut(s) 1780, 2570, 3272
BmiI GGNNCC 9 cut(s) 325, 759, 849, 1692, 2103, 2571, 3384, 3441, 3484
BmrFI CCNGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
BpiI GAAGAC 6 cut(s) 648, 1289, 1850, 2366, 2600, 2834
BplI GAGNNNNNCTC 1 cut(s) 33
BpmI CTGGAG 4 cut(s) 696, 906, 994, 1980
Bpu10I CCTNAGC 2 cut(s) 612, 3378
Bpu14I TTCGAA 2 cut(s) 724, 3171
BpuEI CTTGAG 4 cut(s) 284, 1868, 3481, 3773
BsaAI YACGTR 1 cut(s) 3730
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 134
BsaJI CCNNGG 5 cut(s) 843, 1022, 2443, 2677, 3643
Bsc4I CCNNNNNNNGG 3 cut(s) 160, 1640, 3616
Bse1I ACTGG 8 cut(s) 355, 713, 1228, 2900, 2942, 3242, 4046, 4080
Bse21I CCTNAGG 3 cut(s) 858, 1459, 2227
Bse3DI GCAATG 4 cut(s) 1573, 1659, 2226, 3522
BseBI CCWGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
BseDI CCNNGG 5 cut(s) 843, 1022, 2443, 2677, 3643
BseGI GGATG 6 cut(s) 181, 868, 1334, 1909, 2092, 3886
BseLI CCNNNNNNNGG 3 cut(s) 160, 1640, 3616
BseMI GCAATG 4 cut(s) 1573, 1659, 2226, 3522
BseNI ACTGG 8 cut(s) 355, 713, 1228, 2900, 2942, 3242, 4046, 4080
BseRI GAGGAG 4 cut(s) 2879, 3866, 3869, 3948
BsgI GTGCAG 2 cut(s) 130, 2195
Bsh1236I CGCG 2 cut(s) 3552, 3655
BshFI GGCC 8 cut(s) 295, 1557, 1861, 2225, 2459, 2693, 2974, 3408
BshNI GGYRCC 3 cut(s) 323, 847, 3482
BsiHKAI GWGCWC 2 cut(s) 19, 409
BsiHKCI CYCGRG 1 cut(s) 3616
BslFI GGGAC 3 cut(s) 485, 1600, 3586
BslI CCNNNNNNNGG 3 cut(s) 160, 1640, 3616
BsmAI GTCTC 7 cut(s) 134, 2255, 2410, 2644, 2843, 2861, 3751
BsmFI GGGAC 3 cut(s) 485, 1600, 3586
BsmI GAATGC 3 cut(s) 267, 1450, 3501
BsnI GGCC 8 cut(s) 295, 1557, 1861, 2225, 2459, 2693, 2974, 3408
Bso31I GGTCTC 1 cut(s) 134
BsoBI CYCGRG 1 cut(s) 3616
Bsp119I TTCGAA 2 cut(s) 724, 3171
Bsp1286I GDGCHC 2 cut(s) 19, 409
Bsp1407I TGTACA 1 cut(s) 1201
Bsp19I CCATGG 3 cut(s) 1022, 2443, 2677
BspANI GGCC 8 cut(s) 295, 1557, 1861, 2225, 2459, 2693, 2974, 3408
BspFNI CGCG 2 cut(s) 3552, 3655
BspLI GGNNCC 9 cut(s) 325, 759, 849, 1692, 2103, 2571, 3384, 3441, 3484
BspMAI CTGCAG 5 cut(s) 1453, 2110, 2924, 3310, 4010
BspMI ACCTGC 2 cut(s) 1791, 3909
BspPI GGATC 3 cut(s) 124, 970, 2426
BspT104I TTCGAA 2 cut(s) 724, 3171
BspT107I GGYRCC 3 cut(s) 323, 847, 3482
BspTI CTTAAG 1 cut(s) 541
BspTNI GGTCTC 1 cut(s) 134
BsrDI GCAATG 4 cut(s) 1573, 1659, 2226, 3522
BsrGI TGTACA 1 cut(s) 1201
BsrI ACTGG 8 cut(s) 355, 713, 1228, 2900, 2942, 3242, 4046, 4080
BssECI CCNNGG 5 cut(s) 843, 1022, 2443, 2677, 3643
BssNAI GTATAC 1 cut(s) 2138
BssNI GRCGYC 1 cut(s) 42
BssSI CACGAG 1 cut(s) 1184
BssT1I CCWWGG 4 cut(s) 843, 1022, 2443, 2677
Bst1107I GTATAC 1 cut(s) 2138
Bst2BI CACGAG 1 cut(s) 1184
Bst2UI CCWGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
Bst6I CTCTTC 5 cut(s) 1132, 1209, 2874, 3819, 3843
BstACI GRCGYC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 541
BstAUI TGTACA 1 cut(s) 1201
BstBAI YACGTR 1 cut(s) 3730
BstBI TTCGAA 2 cut(s) 724, 3171
BstC8I GCNNGC 5 cut(s) 433, 1267, 1631, 3018, 3650
BstDSI CCRYGG 3 cut(s) 1022, 2443, 2677
BstEII GGTNACC 1 cut(s) 975
BstF5I GGATG 6 cut(s) 181, 868, 1334, 1909, 2092, 3886
BstFNI CGCG 2 cut(s) 3552, 3655
BstH2I RGCGCY 2 cut(s) 1091, 3205
BstHHI GCGC 4 cut(s) 1090, 3204, 3501, 3552
BstMAI GTCTC 7 cut(s) 134, 2255, 2410, 2644, 2843, 2861, 3751
BstMWI GCNNNNNNNGC 7 cut(s) 301, 1563, 1635, 1987, 3308, 3915, 3975
BstNI CCWGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
BstNSI RCATGY 7 cut(s) 870, 1329, 1518, 2898, 3035, 3652, 3764
BstPI GGTNACC 1 cut(s) 975
BstSCI CCNGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
BstSFI CTRYAG 6 cut(s) 1449, 1671, 2106, 2920, 3306, 4006
BstUI CGCG 2 cut(s) 3552, 3655
BstV2I GAAGAC 6 cut(s) 648, 1289, 1850, 2366, 2600, 2834
BstX2I RGATCY 2 cut(s) 116, 962
BstXI CCANNNNNNTGG 3 cut(s) 1242, 2450, 3450
BstYI RGATCY 2 cut(s) 116, 962
BstZ17I GTATAC 1 cut(s) 2138
Bsu36I CCTNAGG 3 cut(s) 858, 1459, 2227
BsuI GTATCC 2 cut(s) 3532, 3737
BsuRI GGCC 8 cut(s) 295, 1557, 1861, 2225, 2459, 2693, 2974, 3408
BtgI CCRYGG 3 cut(s) 1022, 2443, 2677
BtgZI GCGATG 1 cut(s) 506
BtrI CACGTC 3 cut(s) 1437, 1522, 3533
BtsCI GGATG 6 cut(s) 181, 868, 1334, 1909, 2092, 3886
BtsI GCAGTG 2 cut(s) 1968, 2929
BveI ACCTGC 2 cut(s) 1791, 3909
Cac8I GCNNGC 5 cut(s) 433, 1267, 1631, 3018, 3650
CaiI CAGNNNCTG 3 cut(s) 1466, 2270, 3314
CfoI GCGC 4 cut(s) 1090, 3204, 3501, 3552
Cfr13I GGNCC 3 cut(s) 1780, 2570, 3272
CseI GACGC 2 cut(s) 31, 2324
Csp6I GTAC 6 cut(s) 848, 1202, 3397, 3671, 3727, 3864
CspCI CAANNNNNGTGG 2 cut(s) 3946, 3981
CviQI GTAC 6 cut(s) 848, 1202, 3397, 3671, 3727, 3864
DraI TTTAAA 2 cut(s) 877, 3684
DraIII CACNNNGTG 1 cut(s) 893
DrdI GACNNNNNNGTC 1 cut(s) 2895
DriI GACNNNNNGTC 1 cut(s) 1386
DseDI GACNNNNNNGTC 1 cut(s) 2895
EaeI YGGCCR 1 cut(s) 1555
Eam1104I CTCTTC 5 cut(s) 1132, 1209, 2874, 3819, 3843
Eam1105I GACNNNNNGTC 1 cut(s) 1386
EarI CTCTTC 5 cut(s) 1132, 1209, 2874, 3819, 3843
EciI GGCGGA 3 cut(s) 9, 1157, 4002
Eco130I CCWWGG 4 cut(s) 843, 1022, 2443, 2677
Eco147I AGGCCT 1 cut(s) 295
Eco31I GGTCTC 1 cut(s) 134
Eco32I GATATC 1 cut(s) 356
Eco47I GGWCC 3 cut(s) 1780, 2570, 3272
Eco47III AGCGCT 1 cut(s) 3203
Eco57I CTGAAG 9 cut(s) 545, 648, 660, 1120, 1857, 2039, 2981, 3102, 3566
Eco81I CCTNAGG 3 cut(s) 858, 1459, 2227
Eco88I CYCGRG 1 cut(s) 3616
Eco91I GGTNACC 1 cut(s) 975
EcoO109I RGGNCCY 1 cut(s) 2570
EcoO65I GGTNACC 1 cut(s) 975
EcoRI GAATTC 2 cut(s) 726, 3091
EcoRII CCWGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
EcoRV GATATC 1 cut(s) 356
EcoT14I CCWWGG 4 cut(s) 843, 1022, 2443, 2677
EcoT22I ATGCAT 1 cut(s) 868
ErhI CCWWGG 4 cut(s) 843, 1022, 2443, 2677
FalI AAGNNNNNCTT 2 cut(s) 1604, 1636
FaqI GGGAC 3 cut(s) 485, 1600, 3586
FauI CCCGC 1 cut(s) 3611
FauNDI CATATG 1 cut(s) 2181
FbaI TGATCA 2 cut(s) 178, 808
FblI GTMKAC 2 cut(s) 2137, 3624
FokI GGATG 6 cut(s) 168, 875, 1321, 1916, 2099, 3893
FspAI RTGCGCAY 1 cut(s) 3500
FspBI CTAG 7 cut(s) 104, 618, 852, 1386, 1850, 1857, 3351
FspI TGCGCA 1 cut(s) 3500
GlaI GCGC 4 cut(s) 1089, 3203, 3500, 3551
GsuI CTGGAG 4 cut(s) 696, 906, 994, 1980
HaeII RGCGCY 2 cut(s) 1091, 3205
HaeIII GGCC 8 cut(s) 295, 1557, 1861, 2225, 2459, 2693, 2974, 3408
HgaI GACGC 2 cut(s) 31, 2324
HhaI GCGC 4 cut(s) 1090, 3204, 3501, 3552
Hin1I GRCGYC 1 cut(s) 42
Hin6I GCGC 4 cut(s) 1088, 3202, 3499, 3550
HinP1I GCGC 4 cut(s) 1088, 3202, 3499, 3550
HincII GTYRAC 4 cut(s) 1221, 1573, 1869, 3625
HindII GTYRAC 4 cut(s) 1221, 1573, 1869, 3625
HindIII AAGCTT 1 cut(s) 813
HpaI GTTAAC 1 cut(s) 1869
Hpy99I CGWCG 3 cut(s) 212, 1438, 2340
HpyCH4IV ACGT 7 cut(s) 32, 831, 837, 1436, 1521, 3532, 3729
HpyF10VI GCNNNNNNNGC 7 cut(s) 301, 1563, 1635, 1987, 3308, 3915, 3975
HpySE526I ACGT 7 cut(s) 32, 831, 837, 1436, 1521, 3532, 3729
Hsp92I GRCGYC 1 cut(s) 42
HspAI GCGC 4 cut(s) 1088, 3202, 3499, 3550
KpnI GGTACC 1 cut(s) 851
Ksp22I TGATCA 2 cut(s) 178, 808
KspAI GTTAAC 1 cut(s) 1869
LmnI GCTCC 4 cut(s) 22, 889, 2107, 3445
MaeI CTAG 7 cut(s) 104, 618, 852, 1386, 1850, 1857, 3351
MaeII ACGT 7 cut(s) 32, 831, 837, 1436, 1521, 3532, 3729
MfeI CAATTG 1 cut(s) 2976
MflI RGATCY 2 cut(s) 116, 962
MhlI GDGCHC 2 cut(s) 19, 409
MlyI GAGTC 9 cut(s) 1157, 1226, 1531, 1799, 1840, 2072, 2738, 2942, 3630
MmeI TCCRAC 6 cut(s) 238, 510, 576, 1346, 1785, 3068
Mph1103I ATGCAT 1 cut(s) 868
MroXI GAANNNNTTC 2 cut(s) 2059, 4026
MslI CAYNNNNRTG 6 cut(s) 309, 1240, 1260, 1513, 1791, 2448
MspA1I CMGCKG 1 cut(s) 278
MspCI CTTAAG 1 cut(s) 541
MspR9I CCNGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
MunI CAATTG 1 cut(s) 2976
Mva1269I GAATGC 3 cut(s) 267, 1450, 3501
MvaI CCWGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
MvnI CGCG 2 cut(s) 3552, 3655
MwoI GCNNNNNNNGC 7 cut(s) 301, 1563, 1635, 1987, 3308, 3915, 3975
NcoI CCATGG 3 cut(s) 1022, 2443, 2677
NdeI CATATG 1 cut(s) 2181
NlaIV GGNNCC 9 cut(s) 325, 759, 849, 1692, 2103, 2571, 3384, 3441, 3484
NsbI TGCGCA 1 cut(s) 3500
NsiI ATGCAT 1 cut(s) 868
NspI RCATGY 7 cut(s) 870, 1329, 1518, 2898, 3035, 3652, 3764
NspV TTCGAA 2 cut(s) 724, 3171
PaeI GCATGC 1 cut(s) 3652
PceI AGGCCT 1 cut(s) 295
PciI ACATGT 4 cut(s) 1325, 1514, 3031, 3760
PcsI WCGNNNNNNNCGW 1 cut(s) 88
PctI GAATGC 3 cut(s) 267, 1450, 3501
PdmI GAANNNNTTC 2 cut(s) 2059, 4026
PfeI GAWTC 9 cut(s) 623, 926, 1661, 2282, 2495, 2516, 3227, 3325, 3884
PfoI TCCNGGA 1 cut(s) 3268
PleI GAGTC 9 cut(s) 1157, 1225, 1531, 1799, 1840, 2072, 2737, 2942, 3629
PpsI GAGTC 9 cut(s) 1157, 1225, 1531, 1799, 1840, 2072, 2737, 2942, 3629
Ppu21I YACGTR 1 cut(s) 3730
PpuMI RGGWCCY 1 cut(s) 2570
PscI ACATGT 4 cut(s) 1325, 1514, 3031, 3760
PshBI ATTAAT 1 cut(s) 1752
PsiI TTATAA 1 cut(s) 653
Psp1406I AACGTT 1 cut(s) 32
Psp5II RGGWCCY 1 cut(s) 2570
Psp6I CCWGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
PspEI GGTNACC 1 cut(s) 975
PspGI CCWGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
PspN4I GGNNCC 9 cut(s) 325, 759, 849, 1692, 2103, 2571, 3384, 3441, 3484
PspPI GGNCC 3 cut(s) 1780, 2570, 3272
PspPPI RGGWCCY 1 cut(s) 2570
PstI CTGCAG 5 cut(s) 1453, 2110, 2924, 3310, 4010
PstNI CAGNNNCTG 3 cut(s) 1466, 2270, 3314
PsuI RGATCY 2 cut(s) 116, 962
RsaI GTAC 6 cut(s) 849, 1203, 3398, 3672, 3728, 3865
RsaNI GTAC 6 cut(s) 848, 1202, 3397, 3671, 3727, 3864
RseI CAYNNNNRTG 6 cut(s) 309, 1240, 1260, 1513, 1791, 2448
SalI GTCGAC 1 cut(s) 3623
Sau96I GGNCC 3 cut(s) 1780, 2570, 3272
SchI GAGTC 9 cut(s) 1157, 1226, 1531, 1799, 1840, 2072, 2738, 2942, 3630
ScrFI CCNGG 8 cut(s) 86, 321, 1012, 1635, 3248, 3270, 3645, 3741
SduI GDGCHC 2 cut(s) 19, 409
SfcI CTRYAG 6 cut(s) 1449, 1671, 2106, 2920, 3306, 4006
SfuI TTCGAA 2 cut(s) 724, 3171
SinI GGWCC 3 cut(s) 1780, 2570, 3272
SmiMI CAYNNNNRTG 6 cut(s) 309, 1240, 1260, 1513, 1791, 2448
SmlI CTYRAG 5 cut(s) 299, 541, 1883, 3460, 3752
SmoI CTYRAG 5 cut(s) 299, 541, 1883, 3460, 3752
SpeI ACTAGT 1 cut(s) 1385
SphI GCATGC 1 cut(s) 3652
SseBI AGGCCT 1 cut(s) 295
SspI AATATT 1 cut(s) 3579
SspMI CTAG 7 cut(s) 104, 618, 852, 1386, 1850, 1857, 3351
StuI AGGCCT 1 cut(s) 295
StyD4I CCNGG 8 cut(s) 84, 319, 1010, 1633, 3246, 3268, 3643, 3739
StyI CCWWGG 4 cut(s) 843, 1022, 2443, 2677
TaiI ACGT 7 cut(s) 35, 834, 840, 1439, 1524, 3535, 3732
TaqII GACCGA 1 cut(s) 116
TatI WGTACW 1 cut(s) 1201
TauI GCSGC 5 cut(s) 25, 278, 2843, 3457, 3655
TfiI GAWTC 9 cut(s) 623, 926, 1661, 2282, 2495, 2516, 3227, 3325, 3884
TspGWI ACGGA 2 cut(s) 35, 2410
Vha464I CTTAAG 1 cut(s) 541
VpaK11BI GGWCC 3 cut(s) 1780, 2570, 3272
VspI ATTAAT 1 cut(s) 1752
XapI RAATTY 8 cut(s) 331, 461, 726, 766, 803, 872, 3091, 3368
XceI RCATGY 7 cut(s) 870, 1329, 1518, 2898, 3035, 3652, 3764
XcmI CCANNNNNNNNNTGG 2 cut(s) 34, 4038
XmiI GTMKAC 2 cut(s) 2137, 3624
XmnI GAANNNNTTC 2 cut(s) 2059, 4026
XspI CTAG 7 cut(s) 104, 618, 852, 1386, 1850, 1857, 3351
Zsp2I ATGCAT 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.