FvH4_5g39450

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
29133297 .. 29138943
5647 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g39450.t2

Sequence Viewer

Length: 4104 bp
ATGGACAGCCGTGCTCCGCCGCCCCAAACTTTTCTGGGCGTCCGTTTCGTTCTCCTGGGTTTCGATCCCATCAACGAACGCCAGGTTCGATCTAAGCTGGTAGATCACGGTGGGGTCGATGTTGGTATCTATTCCCCGAATTGCACTCACATCATTGTGGATAGGATTACCTATGATCATCCTGTTTGCGTTGCTGCTCGAAAGGAAGGCAAAACGGTTGTCACCGCTTTGTGGGTTCATCATAGTTATGATGTTGCAATGCCCCTTGATGCCGCTTCTGTTATATACAGACCTCTCAAACAGTTGAATGGTATTCCTGGTGCCAGGAATTTATTAATGTGCTTGACTGGATATCATGGACAAGATAGAGATGACATTATGACAATGGTTGCTTTAATGGGTGCTCAATTTTCTAAACCATTGGTGGCAAGCAAAGTCACTCATCTCATTTGCTATAAATTTGAAGGGGAGAAGTATAGACTTGCCAAACAACTTCCTCAGATCAAAATTGTCAATCATCGCTGGTTGGAAGATTGCTTAAGGGATTGGGTTCTTCTTCGGGAAGATAATTATAACCAGAGTGGCTATGAGTTGGAGATAATGGGGGCTGAGGCTAGGGATTCTGAAGATGAGGCAGAAGACACCTCTATAAAGCAATCTGTGGGGAGAAGCGTGAGTAAGAGTTGCCACAATATACAGGCTGGTTCTCCAGGTCCTTTTCACATTCCGAAGTCAGAGGGAGAGGCCCCTATGGTTCCCCAAAATTCTCTGGAGAAATCTATTTCACAGAATGAAGATAAATTTGATCAAGCTTCAAGATTTTCTGAAGTTCACGTTTCCAAGGTTCCTAGCCCTCATGATGGATGTAAATTTAAAGATGCCATGCTTGTTGGACATAATGATCTCCATCACACAACTCCAGATTCTAAGATGAAAGATGACATGGCATCTACTTTTGGATCTGCTGAAAGGCCGGCCCCTCATTCTGATAGGAAACTAAGCCACTCCAGGCAATCACCATGGAAATCCACACTTCCATTGTACTCGGGAGATAAATCAAGCTATGGAAGTAGGTCTTCTAAAGGGCCTATTCGCAAGTTAAGTGTCAATGATGATTTTGCTTCTTCTTCTTTCAGGACGGAAGAAAATGAAAAAAATGGTTCTAATTGTGCAGAAGCTCTCTTGAAAGTAAATCATGTACAGAATGAAGCAGAGTCAAGTGGTATATTGCCTCAAAAAAGGACACCAGATCATTCTTATGCGAGCTTCAAAATACAGAAGACGAGTTATGATCCAGAGTCAAGCATCGTGAGAAGTCCATCAAGTGATAAACCTGCTAAAGAAATACCAGCATCTTTGATTGATGGTTCATATAAGACTACTATTGACAGAAATGATGAAAACTCTCTGGATAAGAATATGACTCGTTTGAATGCCGCAGAAACCTTAGGTGCTGTTGTGTCACCAACAAAGTCATATAATCTTACCGAGAAGTCATTGACAACTGATGAGCCTTCCTCCCTGACTCTGATCTCAGAGATCAGGCAAGATGGCAATGTCAACAAGAAATCTCCTCTATCATTCCAGAGGTTAAGAAAGTCCCCCATATCCAGCAAGCGTGGAATTGGAGATTTGGCAGTGGAAGAATCTACAACTATAGCGAGCGGAACAGTGGAACCACAAAATCAGCAACAAGACGTTCAGGGTTTGTCTCCAAGAAACAAAATGTCAGTGACTAATAAGTCCAACGACCTTGCTAACTTGGACTTGCATAAAGGTGGAACTGATGTGTTGATAAAATCTGATAGGAAGATGATGCTATCCAAGAAGACTCTTGGTTCTAGGCCCAAGTTAACTTCAGCAAACCAAAAGTTTTCTGTTCACTTGGATGAAGATGCCACCTTAAATGTTGCCACTGGTGATATAAATGCAGCAGACCAGGAGAAATCCCCCTCTGCCATAAAGCATGATCTACTTTCTCCAGATGTTAATGTAAAAGCATTGAAGATGGCAGAGGTTAAAGATGTTACTCCGTCTGGAGATGTTTCTGAGAACAAAATTGACTCTCTGGATGATGACACTGAGGCTCCTGAGGAAGAAGATCAGCATGAATTGGAGAGTGTATGTGAAGCAAAAACGACAGAGATTAAAGCTGCTGTAGTCATGGAAGAGAAATCAGAAGGGGTGCAGCATACATCAAATATCTCCGATCCGTGTGTCCACGGTGCTGCAATGGCCTCAGGGGAAAATATGCTAGAAAATGAACAAGAGACAGTTTCTGTGCTGCTTGGATCAACGTCAAAAGGAGTTGATGATAAAGGAAAGAAGAATAATGGGAGAAAGCATCCTTTGGGTAAAACTAAGTTGAAGACTGTTCCTGCCGTCACTGATAAAATGATCTCGGATGAAGGTGTCTCTAAGGATTTATCAAAACACTCTGATCCCTGTGTCCATAGTGATGCAATGGCCTCAGAAGGAAATATGCAAGAAAATGAACAAGGAGAAACAGTTTCTGAGCAGGTTGAATCAACCTCAAAAGGAGATGGTGTTATAGGAAAGAAGAACAGTGGGAAAAAGGGTCATTTGGTCAAAACTAAGTTGAAGACAGTTCCGGCCGTCAGTGATAAAATGAATTCAGAGAAAGGTGTCTCCAAGGATATAATAAATTACTCCGAGCCCTGTGTCCGTGGTGATGCAACGGCCTCAGTGGAAAATATAAAAGGAAATGAACAAGGAGAGTCAGTTTCTATGCTGGTTGAATCAACCTCGAAAGGAGATGGTGCTAAAGGAAAGAAGAACAGTGGGAAAAAGCGTCCTTTGGGTAGAACCAAGTTGAACACTTCTCCTGCATTAACTGAGACTGAGAACAATGAGGGGACAGGGATGGAAGATGAAGGACTTGAATCTAAGCGCCGCAGTGCACACAAAAGTAAGCCAGAAGACTCATCTGAGCTGAAGGAGAACAGGCCAATTGCCTGTGGAGATCAAAATATAAGCAAGGACAATGAGCAGGCGGGAAAATCACATGTTAAATGTAATTTTACTCCAATGGAGATCAATCAAAAATTGGCGAAGATCAGTCGGAATTCTTCAATACAAGAGGTGAAGGCTTCAGACAGAGTTAATACTCAACCTGAATGGTTTATTTTGAGTGGACATCAGTTGGAAAGGAAGGAGTTTCAGAAAATTATCAAGCGCCTGAAAGGAAGGTGCTGCCGTGATTCCCATAACTGGTCTTACCAGGCAACACATTTCATCATTCCAGAACCAATTCGCAGGATAGAAAAGTTTTTTGCTGCTGCAGCATCTGGAAGGTGGATTCTTAAGAGTGATTATTTGGCAGCTAGTAATCAGGCAGGAAAATTTGTGGCTGAGGAACCTTATGAATGGTACGAGAGTGGCCTAAGTGAAGATGGCACAATCAATTTGGAGGCTCCAAGGAAGTGGCGGCTGTTGAAAGAGAGAACAGGTCATGGTGCCTTTTATGGAATGCACATTGTTATATATGGTGACTGCATTGCACCACGTCTGGATACTCTGAAGCGCGTGGTGAAGGCTGGTGATGGGACGATATTAGCAACTTGTCCTCCTTACACCCGCTTCCTTAACTCGGGAGTTGACTTTGCCATCATTAGCCCAGGCATGCCACGTGTTGATATGTGGGTGCAAGAGTTTTTAAAACATGAGATACCCTGTGTTGTAGCTGATTACTTGGTTGAGTATGTGTGCAAGCCTGGATACCCCCTTGAGAGACATGTGCTATACAATACTCATGCTTGGGCAGAAAAGTCATTTGGCCGTCTGCAGAGCAAGGCAGAAGAGGTTTTGGTTGTGGTGGAGGAAGAGGAGGAGACACCTACGGAGGATTCTGGTAGCAGTGATATACCCTGTGTGGTTTGCGGATCTTGTGACAGAGGAGAGGTGATGCTGATATGTGGCAACGAAAGTGGGTCTGTTGGCTGTGGGATTGGTACTCATATTGACTGCTGCAGTCCGCCACTTGAAGATATTCCAGAGGGTGACTGGTTTTGTCCGAAGTGTTGTAGCCAAAGCAAAAACACCAGTAATCCCTCTAAGAAGAGAAAAAAGGGTAAGAGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1368

Amino Acids

150.3

Weight (kDa)

6.25

Isoelectric Point (pI)

43.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT PF00533 110 - 180 7.3e-09 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 111 - 175 7e-19 twin BRCT domain
BRCT PF00533 1049 - 1116 1.6e-06 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 573
AasI GACNNNNNNGTC 1 cut(s) 1741
Acc36I ACCTGC 2 cut(s) 1342, 2509
AccB1I GGYRCC 2 cut(s) 320, 3476
AccBSI CCGCTC 1 cut(s) 1665
AccII CGCG 1 cut(s) 3546
AclWI GGATC 7 cut(s) 59, 967, 1286, 2204, 2299, 2435, 3910
AcoI YGGCCR 2 cut(s) 2613, 3796
AcsI RAATTY 8 cut(s) 328, 458, 763, 800, 869, 2632, 3085, 3362
AcuI CTGAAG 6 cut(s) 645, 846, 1842, 2975, 3096, 3560
AcvI CACGTG 1 cut(s) 3650
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 4 cut(s) 1043, 1200, 3392, 3973
AfiI CCNNNNNNNGG 4 cut(s) 231, 860, 3231, 3610
AflII CTTAAG 2 cut(s) 538, 3323
AflIII ACRYGT 3 cut(s) 3025, 3649, 3754
AjiI CACGTC 1 cut(s) 3527
AjuI GAANNNNNNNTTGG 2 cut(s) 3777, 3809
AluBI AGCT 9 cut(s) 97, 812, 1062, 1178, 1266, 2153, 2953, 3344, 3704
AluI AGCT 9 cut(s) 97, 812, 1062, 1178, 1266, 2153, 2953, 3344, 3704
Alw21I GWGCWC 3 cut(s) 16, 406, 2923
Alw26I GTCTC 7 cut(s) 1716, 2264, 2419, 2653, 2852, 3745, 3845
Alw44I GTGCAC 1 cut(s) 2919
AlwI GGATC 7 cut(s) 59, 967, 1286, 2204, 2299, 2435, 3910
AlwNI CAGNNNCTG 3 cut(s) 2279, 2513, 3308
Ama87I CYCGRG 2 cut(s) 1045, 3610
ApaLI GTGCAC 1 cut(s) 2919
ApoI RAATTY 8 cut(s) 328, 458, 763, 800, 869, 2632, 3085, 3362
ArsI GACNNNNNNTTYG 2 cut(s) 204, 236
AseI ATTAAT 1 cut(s) 335
Asp700I GAANNNNTTC 2 cut(s) 3270, 4008
AspLEI GCGC 3 cut(s) 2913, 3198, 3546
AspS9I GGNCC 5 cut(s) 713, 745, 976, 1085, 1845
AvaI CYCGRG 2 cut(s) 1045, 3610
AvaII GGWCC 1 cut(s) 713
AxyI CCTNAGG 3 cut(s) 1447, 2091, 2239
BaeGI GKGCMC 1 cut(s) 2923
BaeI ACNNNNGTAYC 2 cut(s) 3382, 3415
BanI GGYRCC 2 cut(s) 320, 3476
BanII GRGCYC 1 cut(s) 2679
BbrPI CACGTG 1 cut(s) 3650
BbsI GAAGAC 7 cut(s) 645, 1068, 1286, 1835, 2375, 2609, 2946
Bbv12I GWGCWC 3 cut(s) 16, 406, 2923
BbvCI CCTCAGC 2 cut(s) 609, 3372
BceAI ACGGC 5 cut(s) 2366, 2600, 2715, 3201, 3783
BciVI GTATCC 2 cut(s) 3526, 3731
BclI TGATCA 2 cut(s) 175, 805
BcoDI GTCTC 7 cut(s) 1716, 2264, 2419, 2653, 2852, 3745, 3845
BfaI CTAG 5 cut(s) 615, 849, 1842, 2255, 3345
BfmI CTRYAG 5 cut(s) 1656, 2157, 3300, 3803, 3988
BfoI RGCGCY 2 cut(s) 2914, 3199
BfrI CTTAAG 2 cut(s) 538, 3323
BfuAI ACCTGC 2 cut(s) 1342, 2509
BfuI GTATCC 2 cut(s) 3526, 3731
Bme18I GGWCC 1 cut(s) 713
BmeT110I CYCGRG 2 cut(s) 1045, 3610
BmgBI CACGTC 1 cut(s) 3527
BmgT120I GGNCC 5 cut(s) 713, 745, 976, 1085, 1845
BpiI GAAGAC 7 cut(s) 645, 1068, 1286, 1835, 2375, 2609, 2946
BplI GAGNNNNNCTC 2 cut(s) 1502, 1534
BpmI CTGGAG 6 cut(s) 693, 791, 903, 991, 1965, 2058
Bpu10I CCTNAGC 2 cut(s) 609, 3372
BpuEI CTTGAG 1 cut(s) 3767
BsaAI YACGTR 1 cut(s) 3650
BsaBI GATNNNNATC 1 cut(s) 906
BsaHI GRCGYC 1 cut(s) 39
BsaJI CCNNGG 8 cut(s) 55, 840, 1019, 2221, 2652, 2686, 3437, 3637
Bsc4I CCNNNNNNNGG 4 cut(s) 231, 860, 3231, 3610
Bse118I RCCGGY 1 cut(s) 973
Bse1I ACTGG 5 cut(s) 352, 1921, 3236, 4028, 4062
Bse21I CCTNAGG 3 cut(s) 1447, 2091, 2239
Bse3DI GCAATG 5 cut(s) 264, 1561, 2238, 2469, 3516
Bse8I GATNNNNATC 1 cut(s) 906
BseDI CCNNGG 8 cut(s) 55, 840, 1019, 2221, 2652, 2686, 3437, 3637
BseGI GGATG 7 cut(s) 178, 869, 1894, 2077, 2344, 2410, 2889
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 4 cut(s) 231, 860, 3231, 3610
BseMI GCAATG 5 cut(s) 264, 1561, 2238, 2469, 3516
BseNI ACTGG 5 cut(s) 352, 1921, 3236, 4028, 4062
BseRI GAGGAG 4 cut(s) 1563, 3860, 3863, 3930
BseSI GKGCMC 1 cut(s) 2923
BseX3I CGGCCG 1 cut(s) 2613
BsgI GTGCAG 2 cut(s) 1191, 2207
Bsh1236I CGCG 1 cut(s) 3546
Bsh1285I CGRYCG 1 cut(s) 2616
BshNI GGYRCC 2 cut(s) 320, 3476
BsiEI CGRYCG 1 cut(s) 2616
BsiHKAI GWGCWC 3 cut(s) 16, 406, 2923
BsiHKCI CYCGRG 2 cut(s) 1045, 3610
BsiSI CCGG 2 cut(s) 974, 2612
BslFI GGGAC 3 cut(s) 1585, 2890, 3580
BslI CCNNNNNNNGG 4 cut(s) 231, 860, 3231, 3610
BsmAI GTCTC 7 cut(s) 1716, 2264, 2419, 2653, 2852, 3745, 3845
BsmFI GGGAC 3 cut(s) 1585, 2890, 3580
BsmI GAATGC 2 cut(s) 1438, 3495
BsoBI CYCGRG 2 cut(s) 1045, 3610
Bsp1286I GDGCHC 4 cut(s) 16, 406, 2679, 2923
Bsp1407I TGTACA 1 cut(s) 1198
Bsp19I CCATGG 1 cut(s) 1019
BspFNI CGCG 1 cut(s) 3546
BspHI TCATGA 1 cut(s) 856
BspMAI CTGCAG 3 cut(s) 3304, 3807, 3992
BspMI ACCTGC 2 cut(s) 1342, 2509
BspPI GGATC 7 cut(s) 59, 967, 1286, 2204, 2299, 2435, 3910
BspT107I GGYRCC 2 cut(s) 320, 3476
BspTI CTTAAG 2 cut(s) 538, 3323
BsrBI CCGCTC 1 cut(s) 1665
BsrDI GCAATG 5 cut(s) 264, 1561, 2238, 2469, 3516
BsrFI RCCGGY 1 cut(s) 973
BsrGI TGTACA 1 cut(s) 1198
BsrI ACTGG 5 cut(s) 352, 1921, 3236, 4028, 4062
BssAI RCCGGY 1 cut(s) 973
BssECI CCNNGG 8 cut(s) 55, 840, 1019, 2221, 2652, 2686, 3437, 3637
BssNI GRCGYC 1 cut(s) 39
BssT1I CCWWGG 4 cut(s) 840, 1019, 2652, 3437
Bst6I CTCTTC 4 cut(s) 2163, 3813, 3837, 4073
BstACI GRCGYC 1 cut(s) 39
BstAFI CTTAAG 2 cut(s) 538, 3323
BstAUI TGTACA 1 cut(s) 1198
BstBAI YACGTR 1 cut(s) 3650
BstC8I GCNNGC 8 cut(s) 430, 975, 1264, 1616, 1663, 3012, 3644, 3731
BstDSI CCRYGG 3 cut(s) 1019, 2221, 2686
BstF5I GGATG 7 cut(s) 178, 869, 1894, 2077, 2344, 2410, 2889
BstFNI CGCG 1 cut(s) 3546
BstH2I RGCGCY 2 cut(s) 2914, 3199
BstHHI GCGC 3 cut(s) 2913, 3198, 3546
BstMAI GTCTC 7 cut(s) 1716, 2264, 2419, 2653, 2852, 3745, 3845
BstMCI CGRYCG 1 cut(s) 2616
BstMWI GCNNNNNNNGC 2 cut(s) 2234, 3302
BstNSI RCATGY 3 cut(s) 3029, 3646, 3758
BstSFI CTRYAG 5 cut(s) 1656, 2157, 3300, 3803, 3988
BstSLI GKGCMC 1 cut(s) 2923
BstUI CGCG 1 cut(s) 3546
BstV2I GAAGAC 7 cut(s) 645, 1068, 1286, 1835, 2375, 2609, 2946
BstX2I RGATCY 2 cut(s) 959, 3902
BstXI CCANNNNNNTGG 1 cut(s) 3444
BstYI RGATCY 2 cut(s) 959, 3902
BstZI CGGCCG 1 cut(s) 2613
Bsu36I CCTNAGG 3 cut(s) 1447, 2091, 2239
BsuI GTATCC 2 cut(s) 3526, 3731
BtgI CCRYGG 3 cut(s) 1019, 2221, 2686
BtgZI GCGATG 1 cut(s) 503
BtrI CACGTC 1 cut(s) 3527
BtsCI GGATG 7 cut(s) 178, 869, 1894, 2077, 2344, 2410, 2889
BtsI GCAGTG 3 cut(s) 1644, 2923, 3883
BveI ACCTGC 2 cut(s) 1342, 2509
Cac8I GCNNGC 8 cut(s) 430, 975, 1264, 1616, 1663, 3012, 3644, 3731
CaiI CAGNNNCTG 3 cut(s) 2279, 2513, 3308
CciI TCATGA 1 cut(s) 856
CfoI GCGC 3 cut(s) 2913, 3198, 3546
Cfr10I RCCGGY 1 cut(s) 973
Cfr13I GGNCC 5 cut(s) 713, 745, 976, 1085, 1845
CseI GACGC 2 cut(s) 28, 2801
Csp6I GTAC 4 cut(s) 1042, 1199, 3391, 3972
CspCI CAANNNNNGTGG 2 cut(s) 3928, 3963
CviQI GTAC 4 cut(s) 1042, 1199, 3391, 3972
DraI TTTAAA 2 cut(s) 874, 3678
DrdI GACNNNNNNGTC 1 cut(s) 1741
DseDI GACNNNNNNGTC 1 cut(s) 1741
EaeI YGGCCR 2 cut(s) 2613, 3796
EagI CGGCCG 1 cut(s) 2613
Eam1104I CTCTTC 4 cut(s) 2163, 3813, 3837, 4073
EarI CTCTTC 4 cut(s) 2163, 3813, 3837, 4073
EciI GGCGGA 2 cut(s) 6, 3984
EclXI CGGCCG 1 cut(s) 2613
Eco130I CCWWGG 4 cut(s) 840, 1019, 2652, 3437
Eco24I GRGCYC 1 cut(s) 2679
Eco32I GATATC 1 cut(s) 353
Eco47I GGWCC 1 cut(s) 713
Eco52I CGGCCG 1 cut(s) 2613
Eco57I CTGAAG 6 cut(s) 645, 846, 1842, 2975, 3096, 3560
Eco72I CACGTG 1 cut(s) 3650
Eco81I CCTNAGG 3 cut(s) 1447, 2091, 2239
Eco88I CYCGRG 2 cut(s) 1045, 3610
EcoO109I RGGNCCY 3 cut(s) 713, 745, 1085
EcoRI GAATTC 2 cut(s) 2632, 3085
EcoRV GATATC 1 cut(s) 353
EcoT14I CCWWGG 4 cut(s) 840, 1019, 2652, 3437
EcoT38I GRGCYC 1 cut(s) 2679
ErhI CCWWGG 4 cut(s) 840, 1019, 2652, 3437
FalI AAGNNNNNCTT 2 cut(s) 1060, 1092
FaqI GGGAC 3 cut(s) 1585, 2890, 3580
FauI CCCGC 2 cut(s) 3007, 3605
FbaI TGATCA 2 cut(s) 175, 805
FokI GGATG 7 cut(s) 165, 876, 1901, 2084, 2331, 2417, 2896
FriOI GRGCYC 1 cut(s) 2679
FseI GGCCGGCC 1 cut(s) 977
FspBI CTAG 5 cut(s) 615, 849, 1842, 2255, 3345
GlaI GCGC 3 cut(s) 2912, 3197, 3545
GsuI CTGGAG 6 cut(s) 693, 791, 903, 991, 1965, 2058
HaeII RGCGCY 2 cut(s) 2914, 3199
HapII CCGG 2 cut(s) 974, 2612
HgaI GACGC 2 cut(s) 28, 2801
HhaI GCGC 3 cut(s) 2913, 3198, 3546
Hin1I GRCGYC 1 cut(s) 39
Hin6I GCGC 3 cut(s) 2911, 3196, 3544
HinP1I GCGC 3 cut(s) 2911, 3196, 3544
HincII GTYRAC 3 cut(s) 1561, 1854, 3619
HindII GTYRAC 3 cut(s) 1561, 1854, 3619
HindIII AAGCTT 1 cut(s) 810
HpaI GTTAAC 1 cut(s) 1854
HpaII CCGG 2 cut(s) 974, 2612
Hpy166II GTNNAC 8 cut(s) 832, 1561, 1854, 1882, 2221, 2921, 3155, 3619
Hpy8I GTNNAC 8 cut(s) 832, 1561, 1854, 1882, 2221, 2921, 3155, 3619
HpyCH4IV ACGT 5 cut(s) 834, 1698, 2297, 3526, 3649
HpyF10VI GCNNNNNNNGC 2 cut(s) 2234, 3302
HpySE526I ACGT 5 cut(s) 834, 1698, 2297, 3526, 3649
Hsp92I GRCGYC 1 cut(s) 39
HspAI GCGC 3 cut(s) 2911, 3196, 3544
KroI GCCGGC 1 cut(s) 973
KroNI GCCGGC 1 cut(s) 975
Ksp22I TGATCA 2 cut(s) 175, 805
KspAI GTTAAC 1 cut(s) 1854
LmnI GCTCC 3 cut(s) 19, 2092, 3439
MaeI CTAG 5 cut(s) 615, 849, 1842, 2255, 3345
MaeII ACGT 5 cut(s) 834, 1698, 2297, 3526, 3649
MaeIII GTNAC 9 cut(s) 220, 436, 1461, 1732, 2026, 2383, 3509, 3908, 4019
MbiI CCGCTC 1 cut(s) 1665
MfeI CAATTG 1 cut(s) 2970
MflI RGATCY 2 cut(s) 959, 3902
MhlI GDGCHC 4 cut(s) 16, 406, 2679, 2923
MlyI GAGTC 8 cut(s) 1223, 1307, 1417, 1519, 1825, 2057, 2747, 2936
MmeI TCCRAC 6 cut(s) 507, 573, 871, 1770, 3062, 3144
MroNI GCCGGC 1 cut(s) 973
MroXI GAANNNNTTC 2 cut(s) 3270, 4008
MslI CAYNNNNRTG 6 cut(s) 155, 246, 1257, 1776, 1887, 2457
MspCI CTTAAG 2 cut(s) 538, 3323
MspI CCGG 2 cut(s) 974, 2612
MunI CAATTG 1 cut(s) 2970
Mva1269I GAATGC 2 cut(s) 1438, 3495
MvnI CGCG 1 cut(s) 3546
MwoI GCNNNNNNNGC 2 cut(s) 2234, 3302
NaeI GCCGGC 1 cut(s) 975
NcoI CCATGG 1 cut(s) 1019
NgoMIV GCCGGC 1 cut(s) 973
NmuCI GTSAC 8 cut(s) 220, 436, 1461, 1732, 2383, 3509, 3908, 4019
NspI RCATGY 3 cut(s) 3029, 3646, 3758
PaeI GCATGC 1 cut(s) 3646
PagI TCATGA 1 cut(s) 856
PciI ACATGT 2 cut(s) 3025, 3754
PcsI WCGNNNNNNNCGW 2 cut(s) 85, 114
PctI GAATGC 2 cut(s) 1438, 3495
PdiI GCCGGC 1 cut(s) 975
PdmI GAANNNNTTC 2 cut(s) 3270, 4008
PfeI GAWTC 9 cut(s) 620, 923, 1646, 2525, 2759, 2903, 3221, 3319, 3866
PleI GAGTC 8 cut(s) 1222, 1306, 1417, 1519, 1825, 2057, 2746, 2936
PmaCI CACGTG 1 cut(s) 3650
PmlI CACGTG 1 cut(s) 3650
PpsI GAGTC 8 cut(s) 1222, 1306, 1417, 1519, 1825, 2057, 2746, 2936
Ppu21I YACGTR 1 cut(s) 3650
PpuMI RGGWCCY 1 cut(s) 713
PscI ACATGT 2 cut(s) 3025, 3754
PshBI ATTAAT 1 cut(s) 335
PsiI TTATAA 1 cut(s) 573
Psp5II RGGWCCY 1 cut(s) 713
PspCI CACGTG 1 cut(s) 3650
PspPI GGNCC 5 cut(s) 713, 745, 976, 1085, 1845
PspPPI RGGWCCY 1 cut(s) 713
PstI CTGCAG 3 cut(s) 3304, 3807, 3992
PstNI CAGNNNCTG 3 cut(s) 2279, 2513, 3308
PsuI RGATCY 2 cut(s) 959, 3902
RigI GGCCGGCC 1 cut(s) 977
RsaI GTAC 4 cut(s) 1043, 1200, 3392, 3973
RsaNI GTAC 4 cut(s) 1042, 1199, 3391, 3972
RseI CAYNNNNRTG 6 cut(s) 155, 246, 1257, 1776, 1887, 2457
Sau96I GGNCC 5 cut(s) 713, 745, 976, 1085, 1845
SchI GAGTC 8 cut(s) 1223, 1307, 1417, 1519, 1825, 2057, 2747, 2936
SduI GDGCHC 4 cut(s) 16, 406, 2679, 2923
SfcI CTRYAG 5 cut(s) 1656, 2157, 3300, 3803, 3988
SinI GGWCC 1 cut(s) 713
SmiMI CAYNNNNRTG 6 cut(s) 155, 246, 1257, 1776, 1887, 2457
SmlI CTYRAG 3 cut(s) 538, 3323, 3746
SmoI CTYRAG 3 cut(s) 538, 3323, 3746
SphI GCATGC 1 cut(s) 3646
SspMI CTAG 5 cut(s) 615, 849, 1842, 2255, 3345
StyI CCWWGG 4 cut(s) 840, 1019, 2652, 3437
TaiI ACGT 5 cut(s) 837, 1701, 2300, 3529, 3652
TaqI TCGA 5 cut(s) 63, 88, 117, 199, 2768
TatI WGTACW 2 cut(s) 1041, 1198
TauI GCSGC 5 cut(s) 22, 275, 1439, 2916, 3451
TfiI GAWTC 9 cut(s) 620, 923, 1646, 2525, 2759, 2903, 3221, 3319, 3866
TseFI GTSAC 8 cut(s) 220, 436, 1461, 1732, 2383, 3509, 3908, 4019
Tsp45I GTSAC 8 cut(s) 220, 436, 1461, 1732, 2383, 3509, 3908, 4019
TspGWI ACGGA 6 cut(s) 32, 1154, 2022, 2202, 2675, 3875
Vha464I CTTAAG 2 cut(s) 538, 3323
VneI GTGCAC 1 cut(s) 2919
VpaK11BI GGWCC 1 cut(s) 713
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 8 cut(s) 328, 458, 763, 800, 869, 2632, 3085, 3362
XceI RCATGY 3 cut(s) 3029, 3646, 3758
XcmI CCANNNNNNNNNTGG 1 cut(s) 4020
XmnI GAANNNNTTC 2 cut(s) 3270, 4008
XspI CTAG 5 cut(s) 615, 849, 1842, 2255, 3345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.