RLG00000000546

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
1889269 .. 1894537
5269 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000546

Sequence Viewer

Length: 4110 bp
ATGGAAAGCCGTGCTCCGCCGCCCAAAACATTTCTGGGTGTCCGTTTCGTTCTGTTGGGTTTCGACCCCATAAACGAACGCCAGGTTCGATCTAAGCTGCTAGATTGCGGTGGGTCTGATGTTGGTCTCTATTCCCCAAATTGCACTCACCTCATTGTGGATAGGATTACCTATGATCATCCTGTATGTGTTGCTGCTCGAAACGACGGCAAAACGGTTGTCACGGCTTTGTGGGTTCATCATAGTTTTGATGTTGGAATGCCCCTTGATGCCGCCGCTATTATATACAGGCCTCTCAAGCATTTGAATGGTATTCCTGGTGCCAAGAATTTATTAATGTGCTTGACTGGATATCATGGACAAGATAGAGATGACATTATGACAATGGTTGGTTTAATGGGTGCTCAGTTTTCTAAACCATTGGTGGCAAGCAAAGTCACTCATCTCATTTGCTATAAATTTGAAGGGGACAAGTATAAACTTGCCAAACAACTCCCTCAGATTAAGATTGTCAATCATCGCTGGTTGGAAGATTGCTTAAGGGATTGGGTTCTTCTTCAGGAAGATAAATATAACCAGAGTGGCTATGAGTTGGAGATAATGGAGGCTGAGGCTAGGGATTCTGAAGATGAGGCTGAAGACACCTGTACAAAGCAATCTGTTGGGAGAAGCATGAATAAGAGCTGCCACAATATACAGGCTGGTTCTCCAGTTCCTTTTCGAATTCCGAAGTCAGAAGGAGAGGTGCCTATGGTTCCCCAAAATTCTGTTGAGAAATCTATTTCTCGGAATGAAGATGAATTTGATCAAGCTTCAAGATTTTTTGACGTTCACGTTTCCAAGGTACCTAGCCCTCAGGATGCATGTAAATTCAAAGATGGCACGCTTGGTGAGCATAATGACCTCCATCACACAACTCCAGATTCTAAGAAGAAAGGTGACATGGCATCTACATTTGGATCCGCTGAAAGGTCACCCCCTCATTCTGATAGGAAACTAAGCTACTCCAGGCAATCACCATGGAAATCCACACTTCCATTATACTTGGGAGATAAATCAGGCTATGGAAGTAGGTCTTCTAAAGCGCCTATTCGCAAGTCAAGTGTCAATGATGATTTTGCCTCTTCTTCCTTCAGGGCGGAAAATGAAAAAATTGACTCTAATTGTCTGGAAGCTCTCTTGAAAGGAAATCATGTACACAATGAAGAAGAGTCAACTGGTATATTGCCACAAAAAAGGACACCAGATGATTCTTATGCGAGCCCCAAATTACAGAAGACAAGTTACGGTGCAAAGTCAAGCATTGTGAGAAGCCCATCATGTGATACATCTCCTAAAGAAATACCAGCATCTTTGTTTGATCGTTCATATAAGACTACTAGTCAGTGTATTAACAGAAATGATGAAAAATCTCTGGATAAGACTATGACGTGTTTGAATGCTGCAGAAACCTCAAGTGCTGTTGTGTCACCAACAAAATCATCTACTTTAAGCAAGAAGTCATTGACATGTGATGTGCCTTCCTCCACGACTCTGATCTCAGAGATCGGCCAAGATGGCAATGTCAACAAGAAAACACCTCTATCCACATTTCAGAGGTTAAGACAGTCCCCATTATCCAGCAAGCCTGGCATTGGAGATTTGGTAATGGAAGAATCTACAACTACAGTGAGCGAAACATTGGAACCACAAAATCAGCAACAAGATGTGCAGGGTTCATCTCCAAGAAACGAACTGTCGGTGATTAATAATTCCAATGACCTTGCTGACCTGCATAAAGGTGGAACTGATGACTCGACAAAATCAGATAGGAAGAAGATGCTCTCCAAGAAGACTCTAGGTTCTAGGCCGAAGTTAACTTCAGCATACCACAAGTTTTCTGTTTACTTGGATGAAGATGCCTCCTTAAATGTTGCCACTGTTGATACAAATGCAGCAGACCAGGAGAAACCCCCTACTGCCATAAAGCCTGATCTACTTTCTCCAGATGTTAGTGTAAAAGCACTGAAGATGGCAGAGATTAAAGATGTTACTGCATCTGGAAATGTTTCTGAGAATAAAATTGACTCCCTGGATGATGAAACTGAGGCTCCTGCGGAAGAAGATCAACATGAAATGGAGAGTATACTTGAAGCAAAAAAGACAGAGAAATCAGAAGGGGTGCAGCATATATCAAATTACTCCAATCCCCGTGTTCATGGTGATGCAATGGCCTCAGGGGAAAATATGCAAGAAAATGAACAAGCAGAAACAGTTTCTGTGCTGGTTGAATCAACCTCAAAAGGAGTTGGTGATAAAGGGAAGAAGAACAGTGGGAGAAAGCTTCCTTTGGGTAAAACTAAGTTGAAGACTGTTCCTGCCGTCACTGATAAAATGAACTCACGGAAAGGTGTCTCTGAGGATTTATTAAATCACTCTGATCCCTGTGTCCATGGTGATGCAATGGCCTCGATGGGAAATATGCAAGAAAATGAACAAGGAGAATCAATTTCTGTGCTGGTTGAATCAACCTCAAAAGGAGTTGGTGTGATAGGAAAGAAGAACAGTGGGAAAAAGGGTCCTTTGGGTAAAACCAAGTTGAAGACTGTTCCTGCCGTCACTGATAAAATGAACTCGGAGAAAGGTGTCTCTGAGGATATATTAAATCACTCCAAGCCCTGTGTGCATGGTGATTCAATGGCCTCAGTGGAAAAGATAAAAGGAGGTGAACAAGGAGAGTCAGTTTCTATGCTGGTTGAATCAACCTCGAAAGGAGATGGTGCTAAGGGAAAGAAGAACAATGGGAAAAGGCGTCCTTTGGGTAGAACCAAGTTGAAGACTTCTCCTGCCGCCACTGAGACTGAGAACACTGAGGAGACAGAGATGGAAGAGAAAGGACTTGCATGTCCAGTAGGCAAATCTAAGTGCTGCAGTAAACCCAAAAGTAAGCCAGAGGACTCGTCTGAACTGAAGGAAAACAGGCCAATTGCTTGTGGAGATCAAAATATAAGCAAGGCGAAAGAGCAGGCAGAAAAATCACATGTTAAATGTAATTTTACTCCAATGGAGATCAATCAAAAGTTGGCGAAGATCAGTCGGAATTCTTCAATACAAGAGGTGAAGGCTTCAGACAGAGTTAAAACTCAACCTGAATGGTTTATTTTGAGTGGACATCAGTTTGAAAGAAAGGAGTTTCAGCAAATTATCAAGCGCTTGAAGGGAAGGTGCTGCCGTGATTCACATAACTGGTCTTACCAGGCAACACATTTCATCATTCCAGAACCAATTCGCAGGATAGAAAAGTTTTTTGCTGCTGCAGCATCTGGAAGGTGGATTCTTAAGAGTGATTATTTGGCAGCTAGTAATCAGGCAGGAAAATTTGTGGCTGAGGAACCTTATGAATGGTACAAGAGTGGCCTAAGTGAAGATGGCACAATCAATTTAGAGGCTCCAAGAAAGTGGCGGCTCTTGAGAGAGAGAACAGGTCATGGTGCCTTTCATGGAATGCGCATTATTATATATGGCGACTGCATTGCACCACGTCTGGATACTCTGAAGCGCGTGGTGAAGGCTGGTGATGGGACAATATTAGCAACTTGTCCTCCTTACACCCGGTTCCTTAACTCAGGAGTTGACTTTGCCATTGTTAGCCCAGGCATGCCACGTGTGGATATGTGGGTACAGGAGTTTTTAAAACATGAGATACCCTGTGTTGTAGCTGATTACTTGGTTGAGTATGTGTGCAAACCTGGATACCCCCTTGAGAGACATGTGCTATACAATACTCATGCTTGGGCAGAAAAGTCATTTGACCATCTGCAAAACAAGGCAGAAGAGGTTTTGGTTGTGGTGGAGGAAGAGGTGGAGAACCGTACATATACACCTATGGATGATTCTGGTAACAGTGATATACCCTGCGTGGTTTGCGGGTCTTGTGACAGAGGAGAGGTGATGCTGATATGTGGCAACGAAAGTGGCTCTGTTGGCTGTGGGATTGGCACTCATATTGACTGCTGCAGTCCGCCACTTGAAGATGTTCCAGAGGGTGACTGGTTCTGTCCAAAGTGTAGTAGCCAAAGCAAAAACGCCAGTAATCCCTCTAAGAAAAGGAAAAAGGGTAAGAGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1370

Amino Acids

150.6

Weight (kDa)

6.95

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT PF00533 110 - 180 1.5e-09 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 111 - 175 2e-18 twin BRCT domain
BRCT PF00533 1047 - 1114 7.9e-07 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2883
Acc16I TGCGCA 1 cut(s) 3488
Acc36I ACCTGC 1 cut(s) 1779
Acc65I GGTACC 1 cut(s) 844
AccB1I GGYRCC 4 cut(s) 320, 745, 844, 3470
AccI GTMKAC 1 cut(s) 2125
AccII CGCG 1 cut(s) 3540
AclWI GGATC 3 cut(s) 954, 967, 2414
AcoI YGGCCR 1 cut(s) 1549
AcsI RAATTY 8 cut(s) 328, 458, 723, 763, 800, 869, 3079, 3356
AcuI CTGAAG 9 cut(s) 542, 645, 657, 1117, 1845, 2027, 2969, 3090, 3554
AcvI CACGTG 1 cut(s) 3644
AcyI GRCGYC 1 cut(s) 2791
AfaI GTAC 6 cut(s) 649, 846, 1197, 3386, 3660, 3853
AfeI AGCGCT 1 cut(s) 3191
AfiI CCNNNNNNNGG 3 cut(s) 157, 969, 1634
AflII CTTAAG 2 cut(s) 538, 3317
AflIII ACRYGT 5 cut(s) 1430, 1508, 3019, 3643, 3748
AhdI GACNNNNNGTC 1 cut(s) 1380
AhlI ACTAGT 1 cut(s) 1379
AjiI CACGTC 2 cut(s) 1431, 3521
AjnI CCWGG 9 cut(s) 81, 316, 1007, 1627, 1941, 2070, 3234, 3631, 3727
AluBI AGCT 8 cut(s) 97, 684, 812, 1002, 1175, 2323, 3338, 3698
AluI AGCT 8 cut(s) 97, 684, 812, 1002, 1175, 2323, 3338, 3698
Alw21I GWGCWC 2 cut(s) 16, 406
Alw26I GTCTC 6 cut(s) 131, 2398, 2632, 2831, 2849, 3739
AlwI GGATC 3 cut(s) 954, 967, 2414
AlwNI CAGNNNCTG 2 cut(s) 2258, 3302
Aor51HI AGCGCT 1 cut(s) 3191
AoxI GGCC 8 cut(s) 290, 1549, 1847, 2211, 2445, 2679, 2960, 3394
ApoI RAATTY 8 cut(s) 328, 458, 723, 763, 800, 869, 3079, 3356
ArsI GACNNNNNNTTYG 2 cut(s) 204, 236
AseI ATTAAT 2 cut(s) 335, 1746
Asp700I GAANNNNTTC 3 cut(s) 2047, 3264, 4014
Asp718I GGTACC 1 cut(s) 844
AspLEI GCGC 4 cut(s) 1087, 3192, 3489, 3540
AspS9I GGNCC 1 cut(s) 2558
AsuC2I CCSGG 1 cut(s) 3592
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 1 cut(s) 2558
AxyI CCTNAGG 2 cut(s) 855, 2215
BaeI ACNNNNGTAYC 4 cut(s) 3376, 3409, 3650, 3683
BamHI GGATCC 1 cut(s) 959
BanI GGYRCC 4 cut(s) 320, 745, 844, 3470
BanII GRGCYC 1 cut(s) 1265
BarI GAAGNNNNNNTAC 2 cut(s) 1268, 1300
BbrPI CACGTG 1 cut(s) 3644
BbsI GAAGAC 7 cut(s) 645, 1068, 1283, 1838, 2354, 2588, 2822
Bbv12I GWGCWC 2 cut(s) 16, 406
BbvCI CCTCAGC 2 cut(s) 609, 3366
BceAI ACGGC 5 cut(s) 223, 240, 2345, 2579, 3195
BcgI CGANNNNNNTGC 4 cut(s) 2430, 2464, 3494, 3528
BciT130I CCWGG 9 cut(s) 83, 318, 1009, 1629, 1943, 2072, 3236, 3633, 3729
BciVI GTATCC 2 cut(s) 3520, 3725
BclI TGATCA 2 cut(s) 175, 805
BcnI CCSGG 1 cut(s) 3592
BcoDI GTCTC 6 cut(s) 131, 2398, 2632, 2831, 2849, 3739
BcuI ACTAGT 1 cut(s) 1379
BfaI CTAG 7 cut(s) 101, 615, 849, 1380, 1838, 1845, 3339
BfmI CTRYAG 5 cut(s) 1443, 1665, 2908, 3294, 3994
BfoI RGCGCY 2 cut(s) 1088, 3193
BfrI CTTAAG 2 cut(s) 538, 3317
BfuAI ACCTGC 1 cut(s) 1779
BfuI GTATCC 2 cut(s) 3520, 3725
BglI GCCNNNNNGGC 1 cut(s) 1557
Bme18I GGWCC 1 cut(s) 2558
BmeRI GACNNNNNGTC 1 cut(s) 1380
BmgBI CACGTC 2 cut(s) 1431, 3521
BmgT120I GGNCC 1 cut(s) 2558
BpiI GAAGAC 7 cut(s) 645, 1068, 1283, 1838, 2354, 2588, 2822
BpmI CTGGAG 4 cut(s) 693, 903, 991, 1968
Bpu10I CCTNAGC 3 cut(s) 609, 2763, 3366
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 4 cut(s) 281, 1438, 3469, 3761
BpuMI CCSGG 1 cut(s) 3592
BsaAI YACGTR 1 cut(s) 3644
BsaHI GRCGYC 1 cut(s) 2791
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 5 cut(s) 840, 1019, 2070, 2431, 3631
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 969, 1634
Bse1I ACTGG 7 cut(s) 352, 710, 1222, 2888, 3230, 4034, 4068
Bse21I CCTNAGG 2 cut(s) 855, 2215
Bse3DI GCAATG 4 cut(s) 1567, 2214, 2448, 3510
BseBI CCWGG 9 cut(s) 83, 318, 1009, 1629, 1943, 2072, 3236, 3633, 3729
BseDI CCNNGG 5 cut(s) 840, 1019, 2070, 2431, 3631
BseGI GGATG 5 cut(s) 178, 865, 1897, 2080, 3874
BseLI CCNNNNNNNGG 3 cut(s) 157, 969, 1634
BseMI GCAATG 4 cut(s) 1567, 2214, 2448, 3510
BseNI ACTGG 7 cut(s) 352, 710, 1222, 2888, 3230, 4034, 4068
BseRI GAGGAG 2 cut(s) 2867, 3936
BsgI GTGCAG 2 cut(s) 1730, 2183
Bsh1236I CGCG 1 cut(s) 3540
BshFI GGCC 8 cut(s) 292, 1551, 1849, 2213, 2447, 2681, 2962, 3396
BshNI GGYRCC 4 cut(s) 320, 745, 844, 3470
BsiHKAI GWGCWC 2 cut(s) 16, 406
BsiSI CCGG 1 cut(s) 3592
BslFI GGGAC 3 cut(s) 482, 1594, 3574
BslI CCNNNNNNNGG 3 cut(s) 157, 969, 1634
BsmAI GTCTC 6 cut(s) 131, 2398, 2632, 2831, 2849, 3739
BsmFI GGGAC 3 cut(s) 482, 1594, 3574
BsmI GAATGC 3 cut(s) 264, 1444, 3489
BsnI GGCC 8 cut(s) 292, 1551, 1849, 2213, 2447, 2681, 2962, 3396
Bso31I GGTCTC 1 cut(s) 131
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 3 cut(s) 16, 406, 1265
Bsp1407I TGTACA 2 cut(s) 647, 1195
Bsp19I CCATGG 2 cut(s) 1019, 2431
BspANI GGCC 8 cut(s) 292, 1551, 1849, 2213, 2447, 2681, 2962, 3396
BspFNI CGCG 1 cut(s) 3540
BspMAI CTGCAG 4 cut(s) 1447, 2912, 3298, 3998
BspMI ACCTGC 1 cut(s) 1779
BspPI GGATC 3 cut(s) 954, 967, 2414
BspT104I TTCGAA 1 cut(s) 721
BspT107I GGYRCC 4 cut(s) 320, 745, 844, 3470
BspTI CTTAAG 2 cut(s) 538, 3317
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 4 cut(s) 1567, 2214, 2448, 3510
BsrGI TGTACA 2 cut(s) 647, 1195
BsrI ACTGG 7 cut(s) 352, 710, 1222, 2888, 3230, 4034, 4068
BssECI CCNNGG 5 cut(s) 840, 1019, 2070, 2431, 3631
BssNAI GTATAC 1 cut(s) 2126
BssNI GRCGYC 1 cut(s) 2791
BssT1I CCWWGG 3 cut(s) 840, 1019, 2431
Bst1107I GTATAC 1 cut(s) 2126
Bst2UI CCWGG 9 cut(s) 83, 318, 1009, 1629, 1943, 2072, 3236, 3633, 3729
Bst6I CTCTTC 5 cut(s) 1129, 1203, 2862, 3807, 3831
BstACI GRCGYC 1 cut(s) 2791
BstAFI CTTAAG 2 cut(s) 538, 3317
BstAUI TGTACA 2 cut(s) 647, 1195
BstBAI YACGTR 1 cut(s) 3644
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 6 cut(s) 430, 884, 1261, 1625, 3006, 3638
BstDSI CCRYGG 2 cut(s) 1019, 2431
BstEII GGTNACC 1 cut(s) 972
BstF5I GGATG 5 cut(s) 178, 865, 1897, 2080, 3874
BstFNI CGCG 1 cut(s) 3540
BstH2I RGCGCY 2 cut(s) 1088, 3193
BstHHI GCGC 4 cut(s) 1087, 3192, 3489, 3540
BstMAI GTCTC 6 cut(s) 131, 2398, 2632, 2831, 2849, 3739
BstMWI GCNNNNNNNGC 8 cut(s) 298, 892, 1557, 1629, 2662, 3296, 3903, 3963
BstNI CCWGG 9 cut(s) 83, 318, 1009, 1629, 1943, 2072, 3236, 3633, 3729
BstNSI RCATGY 6 cut(s) 867, 1512, 2886, 3023, 3640, 3752
BstPI GGTNACC 1 cut(s) 972
BstSFI CTRYAG 5 cut(s) 1443, 1665, 2908, 3294, 3994
BstUI CGCG 1 cut(s) 3540
BstV2I GAAGAC 7 cut(s) 645, 1068, 1283, 1838, 2354, 2588, 2822
BstX2I RGATCY 1 cut(s) 959
BstXI CCANNNNNNTGG 1 cut(s) 3438
BstYI RGATCY 1 cut(s) 959
BstZ17I GTATAC 1 cut(s) 2126
Bsu36I CCTNAGG 2 cut(s) 855, 2215
BsuI GTATCC 2 cut(s) 3520, 3725
BsuRI GGCC 8 cut(s) 292, 1551, 1849, 2213, 2447, 2681, 2962, 3396
BtgI CCRYGG 2 cut(s) 1019, 2431
BtgZI GCGATG 1 cut(s) 503
BtrI CACGTC 2 cut(s) 1431, 3521
BtsCI GGATG 5 cut(s) 178, 865, 1897, 2080, 3874
BveI ACCTGC 1 cut(s) 1779
Cac8I GCNNGC 6 cut(s) 430, 884, 1261, 1625, 3006, 3638
CaiI CAGNNNCTG 2 cut(s) 2258, 3302
CfoI GCGC 4 cut(s) 1087, 3192, 3489, 3540
Cfr13I GGNCC 1 cut(s) 2558
CseI GACGC 1 cut(s) 2780
Csp6I GTAC 6 cut(s) 648, 845, 1196, 3385, 3659, 3852
CspCI CAANNNNNGTGG 2 cut(s) 3934, 3969
CviQI GTAC 6 cut(s) 648, 845, 1196, 3385, 3659, 3852
DraI TTTAAA 1 cut(s) 3672
DrdI GACNNNNNNGTC 1 cut(s) 2883
DriI GACNNNNNGTC 1 cut(s) 1380
DseDI GACNNNNNNGTC 1 cut(s) 2883
EaeI YGGCCR 1 cut(s) 1549
Eam1104I CTCTTC 5 cut(s) 1129, 1203, 2862, 3807, 3831
Eam1105I GACNNNNNGTC 1 cut(s) 1380
EarI CTCTTC 5 cut(s) 1129, 1203, 2862, 3807, 3831
EciI GGCGGA 3 cut(s) 6, 1154, 3990
Eco130I CCWWGG 3 cut(s) 840, 1019, 2431
Eco147I AGGCCT 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 1265
Eco31I GGTCTC 1 cut(s) 131
Eco32I GATATC 1 cut(s) 353
Eco47I GGWCC 1 cut(s) 2558
Eco47III AGCGCT 1 cut(s) 3191
Eco57I CTGAAG 9 cut(s) 542, 645, 657, 1117, 1845, 2027, 2969, 3090, 3554
Eco72I CACGTG 1 cut(s) 3644
Eco81I CCTNAGG 2 cut(s) 855, 2215
Eco91I GGTNACC 1 cut(s) 972
EcoO109I RGGNCCY 1 cut(s) 2558
EcoO65I GGTNACC 1 cut(s) 972
EcoRI GAATTC 2 cut(s) 723, 3079
EcoRII CCWGG 9 cut(s) 81, 316, 1007, 1627, 1941, 2070, 3234, 3631, 3727
EcoRV GATATC 1 cut(s) 353
EcoT14I CCWWGG 3 cut(s) 840, 1019, 2431
EcoT22I ATGCAT 1 cut(s) 865
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 3 cut(s) 840, 1019, 2431
FalI AAGNNNNNCTT 4 cut(s) 1060, 1092, 2779, 2811
FaqI GGGAC 3 cut(s) 482, 1594, 3574
FauI CCCGC 1 cut(s) 3899
FbaI TGATCA 2 cut(s) 175, 805
FblI GTMKAC 1 cut(s) 2125
FokI GGATG 5 cut(s) 165, 872, 1904, 2087, 3881
FriOI GRGCYC 1 cut(s) 1265
FspAI RTGCGCAY 1 cut(s) 3488
FspBI CTAG 7 cut(s) 101, 615, 849, 1380, 1838, 1845, 3339
FspI TGCGCA 1 cut(s) 3488
GlaI GCGC 4 cut(s) 1086, 3191, 3488, 3539
GsuI CTGGAG 4 cut(s) 693, 903, 991, 1968
HaeII RGCGCY 2 cut(s) 1088, 3193
HaeIII GGCC 8 cut(s) 292, 1551, 1849, 2213, 2447, 2681, 2962, 3396
HapII CCGG 1 cut(s) 3592
HgaI GACGC 1 cut(s) 2780
HhaI GCGC 4 cut(s) 1087, 3192, 3489, 3540
Hin1I GRCGYC 1 cut(s) 2791
Hin6I GCGC 4 cut(s) 1085, 3190, 3487, 3538
HinP1I GCGC 4 cut(s) 1085, 3190, 3487, 3538
HincII GTYRAC 4 cut(s) 1215, 1567, 1857, 3613
HindII GTYRAC 4 cut(s) 1215, 1567, 1857, 3613
HindIII AAGCTT 2 cut(s) 810, 2321
HpaI GTTAAC 1 cut(s) 1857
HpaII CCGG 1 cut(s) 3592
Hpy99I CGWCG 1 cut(s) 209
HpyCH4IV ACGT 5 cut(s) 828, 834, 1430, 3520, 3643
HpyF10VI GCNNNNNNNGC 8 cut(s) 298, 892, 1557, 1629, 2662, 3296, 3903, 3963
HpySE526I ACGT 5 cut(s) 828, 834, 1430, 3520, 3643
Hsp92I GRCGYC 1 cut(s) 2791
HspAI GCGC 4 cut(s) 1085, 3190, 3487, 3538
KpnI GGTACC 1 cut(s) 848
Ksp22I TGATCA 2 cut(s) 175, 805
KspAI GTTAAC 1 cut(s) 1857
LmnI GCTCC 3 cut(s) 19, 2095, 3433
MaeI CTAG 7 cut(s) 101, 615, 849, 1380, 1838, 1845, 3339
MaeII ACGT 5 cut(s) 828, 834, 1430, 3520, 3643
MfeI CAATTG 1 cut(s) 2964
MflI RGATCY 1 cut(s) 959
MhlI GDGCHC 3 cut(s) 16, 406, 1265
MlyI GAGTC 8 cut(s) 1151, 1220, 1525, 1787, 1828, 2060, 2726, 2930
MmeI TCCRAC 4 cut(s) 235, 507, 573, 3056
Mph1103I ATGCAT 1 cut(s) 865
MroXI GAANNNNTTC 3 cut(s) 2047, 3264, 4014
MslI CAYNNNNRTG 5 cut(s) 306, 1507, 1779, 2202, 2436
MspA1I CMGCKG 1 cut(s) 965
MspCI CTTAAG 2 cut(s) 538, 3317
MspI CCGG 1 cut(s) 3592
MunI CAATTG 1 cut(s) 2964
Mva1269I GAATGC 3 cut(s) 264, 1444, 3489
MvaI CCWGG 9 cut(s) 83, 318, 1009, 1629, 1943, 2072, 3236, 3633, 3729
MvnI CGCG 1 cut(s) 3540
MwoI GCNNNNNNNGC 8 cut(s) 298, 892, 1557, 1629, 2662, 3296, 3903, 3963
NciI CCSGG 1 cut(s) 3592
NcoI CCATGG 2 cut(s) 1019, 2431
NmuCI GTSAC 9 cut(s) 220, 436, 938, 972, 1467, 2362, 2596, 3914, 4025
NsbI TGCGCA 1 cut(s) 3488
NsiI ATGCAT 1 cut(s) 865
NspI RCATGY 6 cut(s) 867, 1512, 2886, 3023, 3640, 3752
NspV TTCGAA 1 cut(s) 721
PaeI GCATGC 1 cut(s) 3640
PceI AGGCCT 1 cut(s) 292
PciI ACATGT 3 cut(s) 1508, 3019, 3748
PcsI WCGNNNNNNNCGW 1 cut(s) 85
PctI GAATGC 3 cut(s) 264, 1444, 3489
PdmI GAANNNNTTC 3 cut(s) 2047, 3264, 4014
PleI GAGTC 8 cut(s) 1151, 1219, 1525, 1787, 1828, 2060, 2725, 2930
PmaCI CACGTG 1 cut(s) 3644
PmlI CACGTG 1 cut(s) 3644
PpsI GAGTC 8 cut(s) 1151, 1219, 1525, 1787, 1828, 2060, 2725, 2930
Ppu21I YACGTR 1 cut(s) 3644
PpuMI RGGWCCY 1 cut(s) 2558
PscI ACATGT 3 cut(s) 1508, 3019, 3748
PshBI ATTAAT 2 cut(s) 335, 1746
Psp5II RGGWCCY 1 cut(s) 2558
Psp6I CCWGG 9 cut(s) 81, 316, 1007, 1627, 1941, 2070, 3234, 3631, 3727
PspCI CACGTG 1 cut(s) 3644
PspEI GGTNACC 1 cut(s) 972
PspGI CCWGG 9 cut(s) 81, 316, 1007, 1627, 1941, 2070, 3234, 3631, 3727
PspPI GGNCC 1 cut(s) 2558
PspPPI RGGWCCY 1 cut(s) 2558
PstI CTGCAG 4 cut(s) 1447, 2912, 3298, 3998
PstNI CAGNNNCTG 2 cut(s) 2258, 3302
PsuI RGATCY 1 cut(s) 959
RsaI GTAC 6 cut(s) 649, 846, 1197, 3386, 3660, 3853
RsaNI GTAC 6 cut(s) 648, 845, 1196, 3385, 3659, 3852
RseI CAYNNNNRTG 5 cut(s) 306, 1507, 1779, 2202, 2436
Sau96I GGNCC 1 cut(s) 2558
SchI GAGTC 8 cut(s) 1151, 1220, 1525, 1787, 1828, 2060, 2726, 2930
SduI GDGCHC 3 cut(s) 16, 406, 1265
SfcI CTRYAG 5 cut(s) 1443, 1665, 2908, 3294, 3994
SfuI TTCGAA 1 cut(s) 721
SinI GGWCC 1 cut(s) 2558
SmiMI CAYNNNNRTG 5 cut(s) 306, 1507, 1779, 2202, 2436
SmlI CTYRAG 6 cut(s) 296, 538, 1453, 3317, 3448, 3740
SmoI CTYRAG 6 cut(s) 296, 538, 1453, 3317, 3448, 3740
SpeI ACTAGT 1 cut(s) 1379
SphI GCATGC 1 cut(s) 3640
SseBI AGGCCT 1 cut(s) 292
SspI AATATT 1 cut(s) 3567
SspMI CTAG 7 cut(s) 101, 615, 849, 1380, 1838, 1845, 3339
StuI AGGCCT 1 cut(s) 292
StyI CCWWGG 3 cut(s) 840, 1019, 2431
TaiI ACGT 5 cut(s) 831, 837, 1433, 3523, 3646
TaqI TCGA 7 cut(s) 63, 88, 199, 721, 1796, 2450, 2747
TatI WGTACW 2 cut(s) 647, 1195
TauI GCSGC 5 cut(s) 22, 275, 278, 2831, 3445
TseFI GTSAC 9 cut(s) 220, 436, 938, 972, 1467, 2362, 2596, 3914, 4025
Tsp45I GTSAC 9 cut(s) 220, 436, 938, 972, 1467, 2362, 2596, 3914, 4025
TspGWI ACGGA 2 cut(s) 32, 2398
Vha464I CTTAAG 2 cut(s) 538, 3317
VpaK11BI GGWCC 1 cut(s) 2558
VspI ATTAAT 2 cut(s) 335, 1746
XapI RAATTY 8 cut(s) 328, 458, 723, 763, 800, 869, 3079, 3356
XceI RCATGY 6 cut(s) 867, 1512, 2886, 3023, 3640, 3752
XcmI CCANNNNNNNNNTGG 2 cut(s) 31, 4026
XmiI GTMKAC 1 cut(s) 2125
XmnI GAANNNNTTC 3 cut(s) 2047, 3264, 4014
XspI CTAG 7 cut(s) 101, 615, 849, 1380, 1838, 1845, 3339
Zsp2I ATGCAT 1 cut(s) 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.