AT4G02110

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
935006 .. 940328
5323 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G02110.2

Sequence Viewer

Length: 3990 bp
ATGCAATCGGATTCGGGTTTGCCTCCCAAGACGTATTCGGGTGTCAAATTCGCTCTCGTTGGATTCAATCCCATCCATGGAAACTCGTTACGGTCGAAGCTAGTGAGTGGTGGTGGTGTTGATGTTGGCCAATTCACTCAGTCATGTACTCACCTCATCGTAGATAAGCTTCTCTATGATGATCCGATTTGCGTTGCTGCTCGAAACAGCGGGAAGGTAGTTGTCACCGGGTCATGGGTTGATCACAGCTTCGACATTGGAATGCTTGACAATGCAAATTCGATATTGTATAGGCCTCTTAGAGATTTGAATGGGATTCCAGGGTCCAAAGCCTTAGTTGTGTGCTTGACTGGCTACCAAGGTCATGATAGAGAAGATATTATGAGAATGGTTGAGTTGATGGGTGGGCAGTTCTCCAAGCCGTTGGTTGCTAACAGAGTGACCCATCTTATATGCTACAAGTTTGAGGGAGAAAAGTATGAGCTAGCCAAGCGGATTAAGAGGATTAAACTTGTGAACCACCGTTGGTTAGAGGACTGCTTAAAGAATTGGAAGCTCCTACCTGAGGTTGATTACGAGATAAGTGGCTATGAGTTGGACATAATGGAGGCTTCAGCTAGGGATTCTGAGGACGAAGCAGAAGATGCCTCTGTCAAGCCTGCAAATACCAGTCCTCTTGGTCTTAGGGTTGGTGCCGTGCCTGCAGTTGAAATCTCTAAGCCGGGAGGAAAAGATTTCCCTCTTGAGGAAGGGTCATCATTATGTAATACGTCCAAAGATAATTGGTTAACTCCTAAAAGGACGGACAGACCTTTTGAAGCAATGGTCTCTACTGATCTAGGTGTTGCTCAGCAGCATAATTACGTGTCCCCCATTAGGGTTGCAAACAAGACTCCTGAGCAAGGGATGAGCAAAATGGAGACTGATGGCTCGACGTCTATTAACAGGAGTATCAGAAGGCATTCTTCTCTAGCCACTTATTCAAGGAAAACACTTCAGAGATCGCCAGAGACTGATACTTTGGGAAAAGAGTCAAGTGGCCAAAACCGTTCCTTGAGAATGGATGACAAGGGCCTAAAAGCTTCGTCTGCCTTTAATACCTCTGCATCAAAATCTGGTTCTTCCATGGAAAGAACGTCACTCTTTCGAGATCTTGGCAAGATTGATATGTTGCATGGCGAGGAGTTCCCTCCGATGATGCCTCAGGCAAAATTTACAGATGGATCTGTCAGTAGGAAAGATTCACTGAGAGTACACCACAACAGTGAGGCAAGTATTCCACCACCGTCTAGTTTGTTATTGCAGGAACTAAGACCAAGTTCGCCTAACGACAACCTTAGGCCTGTGATGAGCATTAGTGACCCAACTGAAAGTGAGGAAGCTGGCCATAAATCACCCACGAGTGAGTTAAACACTAAACTGTTGAGCTCTAATGTGGTACCCATGGTCGATGCTCTTTCAACTGCGGAGAATATCATTTCAAATTGTGCGTGGGATGAAATACCGGAGAAATCATTGACTGAGAGAATGACAGAAAATGTCTTATTGCAGGAACAAAGATCAGGCTCACCTAAGCAAAACCTTAGTGTTGTGCCAAACCTCAGGGAAGCTGCACATGAGTTGGATCTGAGTGATTCAGCAGCTAGGTTGTTCAATTCAGGTGTTGTTCCCATGGAAGCTGATATCAGAACTCCAGAAAATTCTACTATGAAGGGTGCATTGGATGAAGTACCTGAAAGATCTGTAACTGACCCTGTGATGAGGAGATCTAGCACCTCTCCTGGATCGGGTTTAATCAGAATGAAAGACAAGCAAGAAACAGAGCTGACCACGAAGAAAACAGCTCCAAAAAAGAGCCTAGGCACCAGAGGCAGGAAGAAGAACCCCATTAACCAAAAGGGATCAATATACTTGAGCGAACCTTCCCCAACGGACGAGCGCAATGTTTGTCTAAACAAAGGAAAAGTTTCAGCGCCAGTAACAGGTAATAGCAATCAAAAAGAGATATCAAGCCCTGTCCTAAATACTGAGGTTGTACAAGACATGGCAAAACATATTGACACAGAGACTGAAGCCCTCCAGGGAATTGACTCTGTAGATAATAAATCTTTAGCCCCAGAAGAGAAAGACCATCTTGTGTTGGATCTGATGGTGAACCAAGATAAGCTGCAGGCTAAGACCCCAGAGGCAGCTGATGCAGAGGTGGAAATTACGGTGCTAGAACGGGAGCTTAATGATGTTCCAACTGAAGATCCAAGTGATGGTGCATTACAATCCGAGGTTGATAAGAATACAAGTAAACGCAAAAGGGAGGCTGGTGTAGGTAAAAATAGCCTTCAAAGAGGGAAGAAAGGAAGTTCTTTTACAGCCAAAGTAGGAAAATCCAGAGTCAAGAAGACCAAAATATCTAGAAAAGAAAATGATATCAAAGCAAATGGTACTCTGATGAAAGATGGAGGGGATAACTCTGCGGATGGGAAGGAGAACTTAGCATTGGAACATGAAAATGGGAAGGTCAGTTCTGGTGGAGACCAAAGCCTTGTTGCGGGGGAAACATTAACAAGAAAGGAAGCTGCCACTAAAGATCCAAGCTATGCTGCAGCGCAATTAGAGGTTGATACAAAGAAAGGTAAACGCAGAAAGCAGGCCACTGTAGAAGAAAATAGGCTTCAAACACCTAGTGTCAAAAAGGCGAAAGTTTCTAAAAAAGAAGATGGCGCCAAAGCAAACAATACTGTGAAGAAAGATATATGGATTCACTCTGCAGAAGTGAAGGAGAATGTAGCAGTAGATGAAAATTGTGGAGATGTCAGTTCTGATGGAGCTCAAAGCCTGGTTGTGGAGAAATCTTTAGCTAAAAAGGAGGCTGCAGCTAAGGATCCAAGTAATGCTGCAATGCAATTAGAGTTTGATGATAATAAATGTAAACACGGAAAGGAGGGTATTGTAGAAAGAAGTAGCCTTCAAAGTGGAAAGAAAGGAAGTTCTTCTAGAGTTGAAGTAGGGAAATCAAGTGTCAAGAAGACTAAAAAATCTGAAAAAGGAAGTGGCACCGAAGCAACCGACACTGTGATGAAAGATGTAGGGGATAATTCTGCAAAAGAGAAGGAGAACATTGCAGTGGATAATGAATCTAGAAAGGTGGGATCTGGTGGAGACCAAAGCCCGGTAGCAAGAAAGAAAGTTGCAAAGTCAGCTAAAACAGGTACAAAGGCGGAGAAAGAGTCTAAGCAGCTCAGGGTTAATCCTTTGGCTAGTAGAAAAGTCTTCCAGGACCAAGAACATGAGCCGAAATTTTTTATTGTCAGTGGTCCTAGGTCCCAGAGAAACGAATACCAGCAGATCATTAGGCGTTTAAAAGGAAAATGTTGCCGGGATTCTCATCAGTGGTCTTATCAAGCAACACATTTCATTGCTCCTGAAATCCGTAGGACCGAAAAGTTTTTCGCTGCTGCTGCATCTGGAAGTTGGATTCTGAAGACTGACTATGTGGCTGATTCAAAGGAAGCTGGGAAACTATTACAAGAGGAGCCTTATGAATGGCACAGTTCTGGTCTTAGTGCTGATGGTGCGATAAACCTCGAGTCCCCAAAGAAATGGCGGCTCGTCAGGGAGAAAACAGGACACGGTGCTTTATATGGACTGCGCATTGTTGTATACGGTGACTGCACCATCCCTTGTTTGGATACACTAAAGCGAGCTGTGAAAGCTGGGGATGGTACGATACTTGCAACGGCGCCTCCTTACACGCGTTTCTTGAATCAAAACACGGATTTCGCGTTGATAAGCCCCGGGATGCCGCGGGATGACGTCTGGATCCAAGAGTTTATACGCCACGAAATCCCGTGTGTCCTCTCCGATTACCTGGTGGAGTACGTTTGTAAACCCGGATACGCACTTGACAAGCATGTGCTCTACAACACGAACTCATGGGCAGAAAAGTCGTTTAACAAGATGCAGCTTAGAGCAGATTTGTGTGTGTACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1329

Amino Acids

145.93

Weight (kDa)

8.47

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTCB-BRCT PF12738 1 - 47 4.3e-12 twin BRCT domain
BRCT PF00533 968 - 1038 1.7e-10 BRCA1 C Terminus (BRCT) domain
RTT107_BRCT_5 PF16770 980 - 1050 1.3e-07 Regulator of Ty1 transposition protein 107 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 938, 3813
Acc16I TGCGCA 1 cut(s) 3647
Acc65I GGTACC 1 cut(s) 1438
AccB1I GGYRCC 6 cut(s) 692, 1438, 1862, 2717, 3050, 3736
AccB7I CCANNNNNTGG 1 cut(s) 2261
AccI GTMKAC 1 cut(s) 3657
AccII CGCG 3 cut(s) 3751, 3779, 3802
AciI CCGC 9 cut(s) 210, 493, 1466, 2471, 2546, 3215, 3601, 3800, 3802
AcoI YGGCCR 3 cut(s) 127, 1039, 1384
AcsI RAATTY 5 cut(s) 47, 277, 1211, 1699, 3293
AcuI CTGAAG 5 cut(s) 597, 980, 2091, 2268, 3497
AcyI GRCGYC 4 cut(s) 935, 2718, 3737, 3810
AdeI CACNNNGTG 1 cut(s) 2681
AflIII ACRYGT 2 cut(s) 864, 3749
AjnI CCWGG 6 cut(s) 319, 1780, 2079, 2832, 3270, 3864
AjuI GAANNNNNNNTTGG 4 cut(s) 1703, 1735, 2477, 2509
AleI CACNNNNGTG 1 cut(s) 1263
AloI GAACNNNNNNTCC 2 cut(s) 2503, 2535
Alw21I GWGCWC 3 cut(s) 1430, 2827, 3915
Alw26I GTCTC 6 cut(s) 832, 914, 1004, 2060, 2523, 3150
AlwNI CAGNNNCTG 2 cut(s) 1013, 2069
Ama87I CYCGRG 2 cut(s) 3581, 3791
AoxI GGCC 7 cut(s) 127, 293, 1039, 1072, 1340, 1384, 2646
ApoI RAATTY 5 cut(s) 47, 277, 1211, 1699, 3293
ArsI GACNNNNNNTTYG 4 cut(s) 797, 829, 1003, 1035
Asp700I GAANNNNTTC 3 cut(s) 961, 1966, 2986
Asp718I GGTACC 1 cut(s) 1438
AspA2I CCTAGG 2 cut(s) 1858, 3314
AspLEI GCGC 6 cut(s) 1941, 1975, 2605, 2720, 3648, 3739
AspS9I GGNCC 6 cut(s) 324, 1072, 3274, 3311, 3318, 3432
AsuC2I CCSGG 7 cut(s) 229, 723, 3167, 3374, 3792, 3793, 3888
AsuHPI GGTGA 6 cut(s) 143, 217, 1386, 1560, 2164, 3674
AsuNHI GCTAGC 1 cut(s) 484
AvaI CYCGRG 2 cut(s) 3581, 3791
AvaII GGWCC 5 cut(s) 324, 3274, 3311, 3318, 3432
AvrII CCTAGG 2 cut(s) 1858, 3314
AxyI CCTNAGG 4 cut(s) 564, 1203, 1337, 1601
BaeI ACNNNNGTAYC 2 cut(s) 934, 967
BalI TGGCCA 3 cut(s) 129, 1041, 1386
BamHI GGATCC 2 cut(s) 2878, 3816
BanI GGYRCC 6 cut(s) 692, 1438, 1862, 2717, 3050, 3736
BanII GRGCYC 2 cut(s) 1430, 2827
BarI GAAGNNNNNNTAC 4 cut(s) 153, 185, 2347, 2379
BauI CACGAG 1 cut(s) 1399
BbsI GAAGAC 4 cut(s) 2402, 3029, 3259, 3485
Bbv12I GWGCWC 3 cut(s) 1430, 2827, 3915
BceAI ACGGC 3 cut(s) 406, 680, 3750
BcgI CGANNNNNNTGC 2 cut(s) 3924, 3958
BciT130I CCWGG 6 cut(s) 321, 1782, 2081, 2834, 3272, 3866
BciVI GTATCC 2 cut(s) 3679, 3884
BclI TGATCA 1 cut(s) 241
BcnI CCSGG 7 cut(s) 229, 723, 3167, 3374, 3792, 3793, 3888
BcoDI GTCTC 6 cut(s) 832, 914, 1004, 2060, 2523, 3150
BfmI CTRYAG 7 cut(s) 702, 2094, 2168, 2598, 2652, 2763, 2868
BfoI RGCGCY 3 cut(s) 1976, 2721, 3740
BfuI GTATCC 2 cut(s) 3679, 3884
BglII AGATCT 3 cut(s) 1150, 1739, 1766
BlnI CCTAGG 2 cut(s) 1858, 3314
BlpI GCTNAGC 1 cut(s) 849
Bme18I GGWCC 5 cut(s) 324, 3274, 3311, 3318, 3432
BmeT110I CYCGRG 2 cut(s) 3581, 3791
BmgT120I GGNCC 6 cut(s) 324, 1072, 3274, 3311, 3318, 3432
BmsI GCATC 8 cut(s) 634, 1115, 1188, 1441, 2185, 3467, 3786, 3945
BmtI GCTAGC 1 cut(s) 488
BpiI GAAGAC 4 cut(s) 2402, 3029, 3259, 3485
BpmI CTGGAG 2 cut(s) 1677, 2063
Bpu10I CCTNAGC 4 cut(s) 897, 1572, 2874, 3236
Bpu1102I GCTNAGC 1 cut(s) 849
BpuEI CTTGAG 3 cut(s) 764, 1075, 1933
BpuMI CCSGG 7 cut(s) 229, 723, 3167, 3374, 3792, 3793, 3888
BsaAI YACGTR 1 cut(s) 865
BsaBI GATNNNNATC 1 cut(s) 3381
BsaHI GRCGYC 4 cut(s) 935, 2718, 3737, 3810
BsaI GGTCTC 3 cut(s) 832, 2523, 3150
BsaWI WCCGGW 1 cut(s) 1504
BsaXI ACNNNNNCTCC 4 cut(s) 3209, 3239, 3724, 3754
Bse1I ACTGG 3 cut(s) 355, 669, 1976
Bse21I CCTNAGG 4 cut(s) 564, 1203, 1337, 1601
Bse3DI GCAATG 5 cut(s) 828, 1948, 2901, 3114, 3411
Bse8I GATNNNNATC 1 cut(s) 3381
BseBI CCWGG 6 cut(s) 321, 1782, 2081, 2834, 3272, 3866
BseJI GATNNNNATC 1 cut(s) 3381
BseMI GCAATG 5 cut(s) 828, 1948, 2901, 3114, 3411
BseNI ACTGG 3 cut(s) 355, 669, 1976
BseRI GAGGAG 3 cut(s) 1196, 1777, 3542
BseYI CCCAGC 2 cut(s) 3509, 3710
BsgI GTGCAG 2 cut(s) 1596, 3652
Bsh1236I CGCG 3 cut(s) 3751, 3779, 3802
Bsh1285I CGRYCG 1 cut(s) 95
BshFI GGCC 7 cut(s) 129, 295, 1041, 1074, 1342, 1386, 2648
BshNI GGYRCC 6 cut(s) 692, 1438, 1862, 2717, 3050, 3736
BsiEI CGRYCG 1 cut(s) 95
BsiHKAI GWGCWC 3 cut(s) 1430, 2827, 3915
BsiHKCI CYCGRG 2 cut(s) 3581, 3791
BsiSI CCGG 7 cut(s) 228, 722, 1505, 3167, 3373, 3792, 3888
BslFI GGGAC 3 cut(s) 853, 3304, 3571
BsmAI GTCTC 6 cut(s) 832, 914, 1004, 2060, 2523, 3150
BsmFI GGGAC 3 cut(s) 853, 3304, 3571
BsmI GAATGC 2 cut(s) 267, 961
BsnI GGCC 7 cut(s) 129, 295, 1041, 1074, 1342, 1386, 2648
Bso31I GGTCTC 3 cut(s) 832, 2523, 3150
BsoBI CYCGRG 2 cut(s) 3581, 3791
Bsp1286I GDGCHC 3 cut(s) 1430, 2827, 3915
Bsp1407I TGTACA 1 cut(s) 2035
Bsp1720I GCTNAGC 1 cut(s) 849
Bsp19I CCATGG 4 cut(s) 76, 1125, 1443, 1671
BspACI CCGC 9 cut(s) 210, 493, 1466, 2471, 2546, 3215, 3601, 3800, 3802
BspANI GGCC 7 cut(s) 129, 295, 1041, 1074, 1342, 1386, 2648
BspFNI CGCG 3 cut(s) 3751, 3779, 3802
BspHI TCATGA 1 cut(s) 364
BspMAI CTGCAG 5 cut(s) 706, 2172, 2602, 2767, 2872
BspOI GCTAGC 1 cut(s) 488
BspT107I GGYRCC 6 cut(s) 692, 1438, 1862, 2717, 3050, 3736
BspTNI GGTCTC 3 cut(s) 832, 2523, 3150
BsrDI GCAATG 5 cut(s) 828, 1948, 2901, 3114, 3411
BsrGI TGTACA 1 cut(s) 2035
BsrI ACTGG 3 cut(s) 355, 669, 1976
BssNAI GTATAC 1 cut(s) 3658
BssNI GRCGYC 4 cut(s) 935, 2718, 3737, 3810
BssSI CACGAG 1 cut(s) 1399
BssT1I CCWWGG 7 cut(s) 76, 358, 1125, 1443, 1671, 1858, 3314
Bst1107I GTATAC 1 cut(s) 3658
Bst2BI CACGAG 1 cut(s) 1399
Bst2UI CCWGG 6 cut(s) 321, 1782, 2081, 2834, 3272, 3866
Bst6I CTCTTC 1 cut(s) 2115
BstACI GRCGYC 4 cut(s) 935, 2718, 3737, 3810
BstAPI GCANNNNNTGC 2 cut(s) 644, 2195
BstAUI TGTACA 1 cut(s) 2035
BstBAI YACGTR 1 cut(s) 865
BstC8I GCNNGC 7 cut(s) 486, 660, 702, 1384, 2172, 2646, 3699
BstDSI CCRYGG 5 cut(s) 76, 1125, 1443, 1671, 3800
BstENI CCTNNNNNAGG 2 cut(s) 563, 900
BstFNI CGCG 3 cut(s) 3751, 3779, 3802
BstH2I RGCGCY 3 cut(s) 1976, 2721, 3740
BstHHI GCGC 6 cut(s) 1941, 1975, 2605, 2720, 3648, 3739
BstMAI GTCTC 6 cut(s) 832, 914, 1004, 2060, 2523, 3150
BstMCI CGRYCG 1 cut(s) 95
BstNI CCWGG 6 cut(s) 321, 1782, 2081, 2834, 3272, 3866
BstNSI RCATGY 1 cut(s) 3911
BstSFI CTRYAG 7 cut(s) 702, 2094, 2168, 2598, 2652, 2763, 2868
BstUI CGCG 3 cut(s) 3751, 3779, 3802
BstV2I GAAGAC 4 cut(s) 2402, 3029, 3259, 3485
BstXI CCANNNNNNTGG 2 cut(s) 424, 3597
BstZ17I GTATAC 1 cut(s) 3658
Bsu36I CCTNAGG 4 cut(s) 564, 1203, 1337, 1601
BsuI GTATCC 2 cut(s) 3679, 3884
BsuRI GGCC 7 cut(s) 129, 295, 1041, 1074, 1342, 1386, 2648
BtgI CCRYGG 5 cut(s) 76, 1125, 1443, 1671, 3800
BtsI GCAGTG 1 cut(s) 3126
BtsIMutI CAGTG 7 cut(s) 1244, 1270, 2649, 3066, 3126, 3313, 3392
Cac8I GCNNGC 7 cut(s) 486, 660, 702, 1384, 2172, 2646, 3699
CaiI CAGNNNCTG 2 cut(s) 1013, 2069
CciI TCATGA 1 cut(s) 364
CfoI GCGC 6 cut(s) 1941, 1975, 2605, 2720, 3648, 3739
Cfr13I GGNCC 6 cut(s) 324, 1072, 3274, 3311, 3318, 3432
Cfr42I CCGCGG 1 cut(s) 3803
Cfr9I CCCGGG 1 cut(s) 3791
CsiI ACCWGGT 1 cut(s) 3864
DinI GGCGCC 2 cut(s) 2719, 3738
DraI TTTAAA 1 cut(s) 3357
DraIII CACNNNGTG 1 cut(s) 2681
EaeI YGGCCR 3 cut(s) 127, 1039, 1384
Eam1104I CTCTTC 1 cut(s) 2115
EarI CTCTTC 1 cut(s) 2115
EciI GGCGGA 1 cut(s) 3230
Ecl136II GAGCTC 2 cut(s) 1428, 2825
Eco130I CCWWGG 7 cut(s) 76, 358, 1125, 1443, 1671, 1858, 3314
Eco147I AGGCCT 2 cut(s) 295, 1342
Eco24I GRGCYC 2 cut(s) 1430, 2827
Eco31I GGTCTC 3 cut(s) 832, 2523, 3150
Eco32I GATATC 3 cut(s) 1684, 2007, 2425
Eco47I GGWCC 5 cut(s) 324, 3274, 3311, 3318, 3432
Eco53kI GAGCTC 2 cut(s) 1428, 2825
Eco57I CTGAAG 5 cut(s) 597, 980, 2091, 2268, 3497
Eco81I CCTNAGG 4 cut(s) 564, 1203, 1337, 1601
Eco88I CYCGRG 2 cut(s) 3581, 3791
EcoICRI GAGCTC 2 cut(s) 1428, 2825
EcoNI CCTNNNNNAGG 2 cut(s) 563, 900
EcoO109I RGGNCCY 2 cut(s) 1072, 3318
EcoRII CCWGG 6 cut(s) 319, 1780, 2079, 2832, 3270, 3864
EcoRV GATATC 3 cut(s) 1684, 2007, 2425
EcoT14I CCWWGG 7 cut(s) 76, 358, 1125, 1443, 1671, 1858, 3314
EcoT38I GRGCYC 2 cut(s) 1430, 2827
EgeI GGCGCC 2 cut(s) 2719, 3738
EheI GGCGCC 2 cut(s) 2719, 3738
ErhI CCWWGG 7 cut(s) 76, 358, 1125, 1443, 1671, 1858, 3314
FalI AAGNNNNNCTT 6 cut(s) 949, 981, 2118, 2150, 2471, 2503
FaqI GGGAC 3 cut(s) 853, 3304, 3571
FauI CCCGC 3 cut(s) 203, 2539, 3795
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 1 cut(s) 3657
FriOI GRGCYC 2 cut(s) 1430, 2827
FspI TGCGCA 1 cut(s) 3647
GlaI GCGC 6 cut(s) 1940, 1974, 2604, 2719, 3647, 3738
GsaI CCCAGC 2 cut(s) 3513, 3714
GsuI CTGGAG 2 cut(s) 1677, 2063
HaeII RGCGCY 3 cut(s) 1976, 2721, 3740
HaeIII GGCC 7 cut(s) 129, 295, 1041, 1074, 1342, 1386, 2648
HapII CCGG 7 cut(s) 228, 722, 1505, 3167, 3373, 3792, 3888
HhaI GCGC 6 cut(s) 1941, 1975, 2605, 2720, 3648, 3739
Hin1I GRCGYC 4 cut(s) 935, 2718, 3737, 3810
Hin6I GCGC 6 cut(s) 1939, 1973, 2603, 2718, 3646, 3737
HinP1I GCGC 6 cut(s) 1939, 1973, 2603, 2718, 3646, 3737
HincII GTYRAC 1 cut(s) 789
HindII GTYRAC 1 cut(s) 789
HindIII AAGCTT 2 cut(s) 167, 1080
HpaI GTTAAC 1 cut(s) 789
HpaII CCGG 7 cut(s) 228, 722, 1505, 3167, 3373, 3792, 3888
HphI GGTGA 6 cut(s) 143, 217, 1386, 1560, 2164, 3674
Hpy99I CGWCG 1 cut(s) 937
HpyCH4IV ACGT 7 cut(s) 32, 770, 864, 935, 1136, 3810, 3876
HpySE526I ACGT 7 cut(s) 32, 770, 864, 935, 1136, 3810, 3876
Hsp92I GRCGYC 4 cut(s) 935, 2718, 3737, 3810
HspAI GCGC 6 cut(s) 1939, 1973, 2603, 2718, 3646, 3737
KasI GGCGCC 2 cut(s) 2717, 3736
KpnI GGTACC 1 cut(s) 1442
Ksp22I TGATCA 1 cut(s) 241
KspAI GTTAAC 1 cut(s) 789
KspI CCGCGG 1 cut(s) 3803
LmnI GCTCC 6 cut(s) 561, 1849, 2227, 2822, 3421, 3529
LweI GCATC 8 cut(s) 634, 1115, 1188, 1441, 2185, 3467, 3786, 3945
MabI ACCWGGT 1 cut(s) 3864
MaeII ACGT 7 cut(s) 32, 770, 864, 935, 1136, 3810, 3876
MaeIII GTNAC 8 cut(s) 87, 223, 439, 1137, 1358, 1744, 1978, 3662
MhlI GDGCHC 3 cut(s) 1430, 2827, 3915
MlsI TGGCCA 3 cut(s) 129, 1041, 1386
MluI ACGCGT 1 cut(s) 3749
MluNI TGGCCA 3 cut(s) 129, 1041, 1386
Mly113I GGCGCC 2 cut(s) 2718, 3737
MlyI GAGTC 6 cut(s) 886, 1040, 2084, 2397, 3233, 3593
MmeI TCCRAC 6 cut(s) 40, 576, 1602, 2121, 2267, 3449
Mox20I TGGCCA 3 cut(s) 129, 1041, 1386
MroXI GAANNNNTTC 3 cut(s) 961, 1966, 2986
MscI TGGCCA 3 cut(s) 129, 1041, 1386
MslI CAYNNNNRTG 6 cut(s) 260, 760, 1263, 2505, 3071, 3119
Msp20I TGGCCA 3 cut(s) 129, 1041, 1386
MspA1I CMGCKG 3 cut(s) 210, 2192, 3802
MspI CCGG 7 cut(s) 228, 722, 1505, 3167, 3373, 3792, 3888
Mva1269I GAATGC 2 cut(s) 267, 961
MvaI CCWGG 6 cut(s) 321, 1782, 2081, 2834, 3272, 3866
MvnI CGCG 3 cut(s) 3751, 3779, 3802
NarI GGCGCC 2 cut(s) 2718, 3737
NciI CCSGG 7 cut(s) 229, 723, 3167, 3374, 3792, 3793, 3888
NcoI CCATGG 4 cut(s) 76, 1125, 1443, 1671
NheI GCTAGC 1 cut(s) 484
NmuCI GTSAC 5 cut(s) 223, 439, 1137, 1358, 3662
NsbI TGCGCA 1 cut(s) 3647
NspI RCATGY 1 cut(s) 3911
OliI CACNNNNGTG 1 cut(s) 1263
PaeR7I CTCGAG 1 cut(s) 3581
PagI TCATGA 1 cut(s) 364
PceI AGGCCT 2 cut(s) 295, 1342
PcsI WCGNNNNNNNCGW 2 cut(s) 92, 3776
PctI GAATGC 2 cut(s) 267, 961
PdmI GAANNNNTTC 3 cut(s) 961, 1966, 2986
PflMI CCANNNNNTGG 1 cut(s) 2261
PfoI TCCNGGA 2 cut(s) 1780, 3270
PleI GAGTC 6 cut(s) 886, 1039, 2084, 2396, 3232, 3592
PluTI GGCGCC 2 cut(s) 2721, 3740
PpsI GAGTC 6 cut(s) 886, 1039, 2084, 2396, 3232, 3592
Ppu21I YACGTR 1 cut(s) 865
PpuMI RGGWCCY 1 cut(s) 3318
Psp124BI GAGCTC 2 cut(s) 1430, 2827
Psp5II RGGWCCY 1 cut(s) 3318
Psp6I CCWGG 6 cut(s) 319, 1780, 2079, 2832, 3270, 3864
PspFI CCCAGC 2 cut(s) 3509, 3710
PspGI CCWGG 6 cut(s) 319, 1780, 2079, 2832, 3270, 3864
PspPI GGNCC 6 cut(s) 324, 1072, 3274, 3311, 3318, 3432
PspPPI RGGWCCY 1 cut(s) 3318
PspXI VCTCGAGB 1 cut(s) 3581
PstI CTGCAG 5 cut(s) 706, 2172, 2602, 2767, 2872
PstNI CAGNNNCTG 2 cut(s) 1013, 2069
PvuII CAGCTG 1 cut(s) 2192
RseI CAYNNNNRTG 6 cut(s) 260, 760, 1263, 2505, 3071, 3119
SacI GAGCTC 2 cut(s) 1430, 2827
SacII CCGCGG 1 cut(s) 3803
Sau96I GGNCC 6 cut(s) 324, 1072, 3274, 3311, 3318, 3432
SchI GAGTC 6 cut(s) 886, 1040, 2084, 2397, 3233, 3593
SduI GDGCHC 3 cut(s) 1430, 2827, 3915
SexAI ACCWGGT 1 cut(s) 3864
SfaNI GCATC 8 cut(s) 634, 1115, 1188, 1441, 2185, 3467, 3786, 3945
SfcI CTRYAG 7 cut(s) 702, 2094, 2168, 2598, 2652, 2763, 2868
SfoI GGCGCC 2 cut(s) 2719, 3738
Sfr274I CTCGAG 1 cut(s) 3581
Sfr303I CCGCGG 1 cut(s) 3803
SgrBI CCGCGG 1 cut(s) 3803
SinI GGWCC 5 cut(s) 324, 3274, 3311, 3318, 3432
SlaI CTCGAG 1 cut(s) 3581
SmaI CCCGGG 1 cut(s) 3793
SmiMI CAYNNNNRTG 6 cut(s) 260, 760, 1263, 2505, 3071, 3119
SmlI CTYRAG 4 cut(s) 743, 1054, 1912, 3581
SmoI CTYRAG 4 cut(s) 743, 1054, 1912, 3581
SseBI AGGCCT 2 cut(s) 295, 1342
SsiI CCGC 9 cut(s) 210, 493, 1466, 2471, 2546, 3215, 3601, 3800, 3802
SspDI GGCGCC 2 cut(s) 2717, 3736
SstI GAGCTC 2 cut(s) 1430, 2827
StuI AGGCCT 2 cut(s) 295, 1342
StyI CCWWGG 7 cut(s) 76, 358, 1125, 1443, 1671, 1858, 3314
TaiI ACGT 7 cut(s) 35, 773, 867, 938, 1139, 3813, 3879
TaqI TCGA 8 cut(s) 95, 202, 252, 281, 932, 1147, 1449, 3582
TaqII GACCGA 1 cut(s) 3449
TatI WGTACW 3 cut(s) 146, 1252, 2035
TauI GCSGC 2 cut(s) 3604, 3802
TscAI CASTG 7 cut(s) 1251, 1270, 2656, 3073, 3126, 3313, 3392
TseFI GTSAC 5 cut(s) 223, 439, 1137, 1358, 3662
Tsp45I GTSAC 5 cut(s) 223, 439, 1137, 1358, 3662
TspGWI ACGGA 5 cut(s) 818, 1946, 2946, 3416, 3785
TspMI CCCGGG 1 cut(s) 3791
TspRI CASTG 7 cut(s) 1251, 1270, 2656, 3073, 3126, 3313, 3392
Van91I CCANNNNNTGG 1 cut(s) 2261
VpaK11BI GGWCC 5 cut(s) 324, 3274, 3311, 3318, 3432
XagI CCTNNNNNAGG 2 cut(s) 563, 900
XapI RAATTY 5 cut(s) 47, 277, 1211, 1699, 3293
XbaI TCTAGA 3 cut(s) 2408, 2990, 3134
XceI RCATGY 1 cut(s) 3911
XcmI CCANNNNNNNNNTGG 1 cut(s) 3679
XhoI CTCGAG 1 cut(s) 3581
XmaI CCCGGG 1 cut(s) 3791
XmaJI CCTAGG 2 cut(s) 1858, 3314
XmiI GTMKAC 1 cut(s) 3657
XmnI GAANNNNTTC 3 cut(s) 961, 1966, 2986
ZraI GACGTC 2 cut(s) 936, 3811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.