Rroxscaffold_3G00218700

DnaJ heat shock amino-terminal domain protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0009211
Physical Location & Seq
Reverse (-)
986332 .. 989198
2867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00218700.1

Sequence Viewer

Length: 1755 bp
ATGGCTGCTGCTACTTCTCCTTGTCTTTCTTCTAATGACAAGAAGCACTGGTGGCTTAGCACTAGAAAGATTGTGGACAAGTATATCAGAGACGCCAGAAGCCTGATTGCCAGTCATGAACACAGCGAGATCGCCTCCGCCGTGGGACTACTAGACGCGGCCCTCGCAATCTCACCGCGGCTCGAACAAGCCCTCGAACTCAAAGCCAGGTCTCTGCTCTTTCTCGGCCGATTCAAAGACGTGGCTGATATGCTCCAGGACTACATTCCCAGCCTCAAAATGGGAATCGAAGACTCCTCCGGCTCATCCGACTCTTCGTCTCAGAATCTATCGAGGGAGCGAGTCAAGCTTCTCTCGGCCAACAGCACCAACTCCTCCTCCGACTCGCCATGTCAGGATCCCTCCTTCAAGTGCTTCTCTATCTCCGACTTGAAGAAGAAAGTCATGGCAGGCCTCTGCAAAAATTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTCTGGGGCAGGCTTGCTGCCATTTGGGACTAATGGAGGATGCCATGGCCCTCCTCCAAACCGGCAAACGCCTCGCTGCTGCCGCATTCCGCCGCGAGAGCACTTGCTTATCCGACGACAGTTTCTCCTTCCCCAATTTTTTCAACAACACATCCTCGTCCTCCACCAACAATGCACCCTCAACGCCCCCGCGGACCTTAACCGAGACTGAAACCGTGACCCACCTCCTCAGCCACATCAAGCAGCTCCTCCGCCGCAGAACTGCAGCCCTCGCTGCCCTTGAAGTTGGTGCATACTCCGAGTCCATCCGCCACTTCAGCAAAATCCTCGACGGCCGGCGAGGTGCACCCCAGGGATTCCTGGCCGAGTGCTACATGCAGCGCGCCTCAGCGTACCGGGCTACTGGTCGGATAGCGGAGGCCATTGCGGACTGCAATCGGACTTTGGCTCTTGACCCCAGTTGTATACAAGCATTAGACACAAGAGCTGCACTTCTCGAAACAATCAGGTGTTTGCCGGATTGCTTGCATGATCTAGAGCACTTGAAGCTTTTGTACAATTCAATTTTGAGGGACCGAAAGCTTCCCGGTCCGGCATGGAAAAGACACAACAATGTCAGGTACAGGGAAATTCCGGGGAAATTATGTGTTCTGACAACGAAGATACAAGAACTGAAACAGAGGGTGGCTTCTGGAGAGACAGGAAATGTGGATTACTATGCTTTGATCGGTTTAAGAAGAGGGTGTTCAAGGTCCGAGTTAGACAAAGCTTATTTGTTGCTGTGTTTGAGGCACAAGCCTGATAAGGCCACTGTTTTCATTGATCGGTGTGAGTTAGCTGATGATCGCGATATTGATTCGGTTAGAGATAGAGCAAAGCTATCTGCATTGTTGCTGTACAGATTGCTCCAGAAAGGTTATGCTAGTTTGAGCACCACCATTATGGACGAAGAGGCTTCTGAGAAACAGAGAAAGAAGGCTGCAGCTGCACTTCAAGCAGCTCAAGCACAGGCTCATGCTCAGGCCGCACAGGCTGCTGCAGCGGCGGCAATTCAAATCCAACAGACCCAAGAAGCAATGATTGAATTCGAATCTGCTTCCTCAAATTCGAATTCGAATAGTAATAGGATGGTTCATTCATCGGAAGCGAAAGCGTTCCAAGGGGTGTTTTGCAGAGACATTGCGGTGGTTGGGAATTTGCTGTCGCAAGTAGGGTTTAACCGCCCAATTACAGTCAAGTATGAGGCATTGAGCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

584

Amino Acids

64.38

Weight (kDa)

8.91

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 287 - 320 8.2e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 961
AccII CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
AclWI GGATC 2 cut(s) 392, 405
AcoI YGGCCR 4 cut(s) 226, 357, 829, 858
AcsI RAATTY 5 cut(s) 1125, 1580, 1600, 1606, 1690
AcuI CTGAAG 1 cut(s) 796
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 5 cut(s) 491, 890, 1052, 1118, 1394
AfiI CCNNNNNNNGG 1 cut(s) 280
AhdI GACNNNNNGTC 1 cut(s) 316
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 4 cut(s) 206, 255, 846, 855
Alw21I GWGCWC 4 cut(s) 599, 844, 1038, 1430
Alw26I GTCTC 6 cut(s) 84, 216, 324, 695, 1187, 1665
Alw44I GTGCAC 1 cut(s) 840
AlwI GGATC 2 cut(s) 392, 405
ApaLI GTGCAC 1 cut(s) 840
ApoI RAATTY 5 cut(s) 1125, 1580, 1600, 1606, 1690
Asp700I GAANNNNTTC 1 cut(s) 1649
AspLEI GCGC 2 cut(s) 879, 881
AspS9I GGNCC 6 cut(s) 160, 544, 690, 1069, 1085, 1248
AsuC2I CCSGG 3 cut(s) 893, 1083, 1131
AsuHPI GGTGA 1 cut(s) 165
AsuII TTCGAA 3 cut(s) 1584, 1604, 1610
AvaII GGWCC 4 cut(s) 690, 1069, 1085, 1248
BaeGI GKGCMC 1 cut(s) 844
BamHI GGATCC 1 cut(s) 397
BarI GAAGNNNNNNTAC 2 cut(s) 1034, 1066
BbsI GAAGAC 1 cut(s) 297
Bbv12I GWGCWC 4 cut(s) 599, 844, 1038, 1430
BbvCI CCTCAGC 2 cut(s) 725, 883
BccI CCATC 2 cut(s) 809, 1618
BceAI ACGGC 2 cut(s) 125, 844
BcgI CGANNNNNNTGC 4 cut(s) 550, 584, 805, 839
BciT130I CCWGG 4 cut(s) 208, 257, 848, 857
BcnI CCSGG 3 cut(s) 893, 1083, 1131
BcoDI GTCTC 6 cut(s) 84, 216, 324, 695, 1187, 1665
BfaI CTAG 4 cut(s) 63, 152, 1031, 1419
BfmI CTRYAG 3 cut(s) 759, 1476, 1533
BglI GCCNNNNNGGC 1 cut(s) 1526
BlpI GCTNAGC 1 cut(s) 56
Bme1390I CCNGG 7 cut(s) 208, 257, 848, 857, 893, 1083, 1131
Bme18I GGWCC 4 cut(s) 690, 1069, 1085, 1248
BmeRI GACNNNNNGTC 1 cut(s) 316
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 6 cut(s) 160, 544, 690, 1069, 1085, 1248
BmiI GGNNCC 2 cut(s) 399, 1070
BmrFI CCNGG 7 cut(s) 208, 257, 848, 857, 893, 1083, 1131
BmrI ACTGGG 1 cut(s) 948
BmsI GCATC 1 cut(s) 526
BmuI ACTGGG 1 cut(s) 948
BpiI GAAGAC 1 cut(s) 297
BplI GAGNNNNNCTC 2 cut(s) 119, 151
BpmI CTGGAG 3 cut(s) 239, 1209, 1388
Bpu10I CCTNAGC 3 cut(s) 725, 883, 1515
Bpu1102I GCTNAGC 1 cut(s) 56
Bpu14I TTCGAA 3 cut(s) 1584, 1604, 1610
BpuEI CTTGAG 1 cut(s) 1482
BpuMI CCSGG 3 cut(s) 893, 1083, 1131
BsaHI GRCGYC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 216
BsaJI CCNNGG 8 cut(s) 141, 176, 540, 686, 846, 847, 1130, 1654
BsaXI ACNNNNNCTCC 4 cut(s) 362, 392, 605, 635
Bsc4I CCNNNNNNNGG 1 cut(s) 280
Bse118I RCCGGY 2 cut(s) 557, 831
Bse1I ACTGG 4 cut(s) 53, 111, 904, 954
Bse3DI GCAATG 4 cut(s) 488, 918, 1578, 1674
BseBI CCWGG 4 cut(s) 208, 257, 848, 857
BseDI CCNNGG 8 cut(s) 141, 176, 540, 686, 846, 847, 1130, 1654
BseGI GGATG 5 cut(s) 305, 541, 647, 801, 1629
BseLI CCNNNNNNNGG 1 cut(s) 280
BseMI GCAATG 4 cut(s) 488, 918, 1578, 1674
BseMII CTCAG 5 cut(s) 335, 739, 897, 1446, 1529
BseNI ACTGG 4 cut(s) 53, 111, 904, 954
BsePI GCGCGC 1 cut(s) 877
BseRI GAGGAG 6 cut(s) 286, 364, 367, 539, 713, 734
BseSI GKGCMC 1 cut(s) 844
BseX3I CGGCCG 2 cut(s) 226, 829
BseYI CCCAGC 1 cut(s) 269
BsgI GTGCAG 2 cut(s) 969, 1467
Bsh1236I CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
Bsh1285I CGRYCG 2 cut(s) 229, 832
BsiEI CGRYCG 2 cut(s) 229, 832
BsiHKAI GWGCWC 4 cut(s) 599, 844, 1038, 1430
BsiSI CCGG 8 cut(s) 300, 558, 832, 892, 1013, 1083, 1088, 1130
BslFI GGGAC 3 cut(s) 159, 537, 1082
BslI CCNNNNNNNGG 1 cut(s) 280
BsmAI GTCTC 6 cut(s) 84, 216, 324, 695, 1187, 1665
BsmBI CGTCTC 2 cut(s) 84, 324
BsmFI GGGAC 3 cut(s) 159, 537, 1082
BsmI GAATGC 1 cut(s) 581
Bso31I GGTCTC 1 cut(s) 216
Bsp119I TTCGAA 3 cut(s) 1584, 1604, 1610
Bsp1286I GDGCHC 4 cut(s) 599, 844, 1038, 1430
Bsp1407I TGTACA 2 cut(s) 1050, 1392
Bsp143I GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
Bsp1720I GCTNAGC 1 cut(s) 56
Bsp19I CCATGG 1 cut(s) 540
Bsp68I TCGCGA 1 cut(s) 1344
BspCNI CTCAG 5 cut(s) 334, 738, 896, 1447, 1528
BspFNI CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
BspHI TCATGA 1 cut(s) 115
BspLI GGNNCC 2 cut(s) 399, 1070
BspMAI CTGCAG 3 cut(s) 763, 1480, 1537
BspPI GGATC 2 cut(s) 392, 405
BspT104I TTCGAA 3 cut(s) 1584, 1604, 1610
BspTNI GGTCTC 1 cut(s) 216
BsrDI GCAATG 4 cut(s) 488, 918, 1578, 1674
BsrFI RCCGGY 2 cut(s) 557, 831
BsrGI TGTACA 2 cut(s) 1050, 1392
BsrI ACTGG 4 cut(s) 53, 111, 904, 954
BssAI RCCGGY 2 cut(s) 557, 831
BssECI CCNNGG 8 cut(s) 141, 176, 540, 686, 846, 847, 1130, 1654
BssHII GCGCGC 1 cut(s) 877
BssMI GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
BssNAI GTATAC 1 cut(s) 962
BssNI GRCGYC 1 cut(s) 93
BssT1I CCWWGG 2 cut(s) 540, 1654
Bst1107I GTATAC 1 cut(s) 962
Bst2UI CCWGG 4 cut(s) 208, 257, 848, 857
Bst4CI ACNGT 4 cut(s) 617, 712, 1309, 1729
Bst6I CTCTTC 3 cut(s) 319, 1228, 1440
BstACI GRCGYC 1 cut(s) 93
BstAPI GCANNNNNTGC 2 cut(s) 465, 1529
BstAUI TGTACA 2 cut(s) 1050, 1392
BstBI TTCGAA 3 cut(s) 1584, 1604, 1610
BstC8I GCNNGC 6 cut(s) 451, 507, 511, 833, 879, 1022
BstDEI CTNAG 6 cut(s) 56, 321, 725, 883, 1455, 1515
BstDSI CCRYGG 4 cut(s) 141, 176, 540, 686
BstF5I GGATG 5 cut(s) 305, 541, 647, 801, 1629
BstFNI CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
BstHHI GCGC 2 cut(s) 879, 881
BstKTI GATC 6 cut(s) 132, 400, 1030, 1224, 1321, 1342
BstMAI GTCTC 6 cut(s) 84, 216, 324, 695, 1187, 1665
BstMBI GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
BstMCI CGRYCG 2 cut(s) 229, 832
BstNI CCWGG 4 cut(s) 208, 257, 848, 857
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 7 cut(s) 206, 255, 846, 855, 891, 1081, 1129
BstSFI CTRYAG 3 cut(s) 759, 1476, 1533
BstSLI GKGCMC 1 cut(s) 844
BstUI CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
BstV2I GAAGAC 1 cut(s) 297
BstX2I RGATCY 1 cut(s) 397
BstXI CCANNNNNNTGG 1 cut(s) 1438
BstYI RGATCY 1 cut(s) 397
BstZ17I GTATAC 1 cut(s) 962
BstZI CGGCCG 2 cut(s) 226, 829
BtgI CCRYGG 4 cut(s) 141, 176, 540, 686
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 5 cut(s) 305, 541, 647, 801, 1629
BtsIMutI CAGTG 2 cut(s) 46, 1305
BtuMI TCGCGA 1 cut(s) 1344
Cac8I GCNNGC 6 cut(s) 451, 507, 511, 833, 879, 1022
CciI TCATGA 1 cut(s) 115
CfoI GCGC 2 cut(s) 879, 881
Cfr10I RCCGGY 2 cut(s) 557, 831
Cfr13I GGNCC 6 cut(s) 160, 544, 690, 1069, 1085, 1248
Cfr42I CCGCGG 2 cut(s) 179, 689
CpoI CGGWCCG 1 cut(s) 1085
CseI GACGC 2 cut(s) 101, 164
Csp6I GTAC 5 cut(s) 490, 889, 1051, 1117, 1393
CspI CGGWCCG 1 cut(s) 1085
CviAII CATG 8 cut(s) 116, 390, 445, 541, 871, 1025, 1092, 1511
CviQI GTAC 5 cut(s) 490, 889, 1051, 1117, 1393
DdeI CTNAG 6 cut(s) 56, 321, 725, 883, 1455, 1515
DpnI GATC 6 cut(s) 131, 399, 1029, 1223, 1320, 1341
DpnII GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
DriI GACNNNNNGTC 1 cut(s) 316
EaeI YGGCCR 4 cut(s) 226, 357, 829, 858
EagI CGGCCG 2 cut(s) 226, 829
Eam1104I CTCTTC 3 cut(s) 319, 1228, 1440
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 3 cut(s) 319, 1228, 1440
EciI GGCGGA 4 cut(s) 127, 575, 737, 794
EclXI CGGCCG 2 cut(s) 226, 829
Eco130I CCWWGG 2 cut(s) 540, 1654
Eco147I AGGCCT 1 cut(s) 453
Eco31I GGTCTC 1 cut(s) 216
Eco47I GGWCC 4 cut(s) 690, 1069, 1085, 1248
Eco52I CGGCCG 2 cut(s) 226, 829
Eco57I CTGAAG 1 cut(s) 796
EcoRI GAATTC 2 cut(s) 1580, 1606
EcoRII CCWGG 4 cut(s) 206, 255, 846, 855
EcoT14I CCWWGG 2 cut(s) 540, 1654
ErhI CCWWGG 2 cut(s) 540, 1654
Esp3I CGTCTC 2 cut(s) 84, 324
FaeI CATG 8 cut(s) 119, 393, 448, 544, 874, 1028, 1095, 1514
FaqI GGGAC 3 cut(s) 159, 537, 1082
FatI CATG 8 cut(s) 115, 389, 444, 540, 870, 1024, 1091, 1510
FauI CCCGC 1 cut(s) 693
FblI GTMKAC 1 cut(s) 961
FokI GGATG 5 cut(s) 292, 548, 634, 788, 1636
FspBI CTAG 4 cut(s) 63, 152, 1031, 1419
GlaI GCGC 2 cut(s) 878, 880
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 3 cut(s) 239, 1209, 1388
HapII CCGG 8 cut(s) 300, 558, 832, 892, 1013, 1083, 1088, 1130
HgaI GACGC 2 cut(s) 101, 164
HhaI GCGC 2 cut(s) 879, 881
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 8 cut(s) 119, 393, 448, 544, 874, 1028, 1095, 1514
Hin6I GCGC 2 cut(s) 877, 879
HinP1I GCGC 2 cut(s) 877, 879
HindIII AAGCTT 4 cut(s) 347, 1043, 1076, 1263
HpaII CCGG 8 cut(s) 300, 558, 832, 892, 1013, 1083, 1088, 1130
HphI GGTGA 1 cut(s) 165
Hpy166II GTNNAC 3 cut(s) 76, 842, 962
Hpy188III TCNNGA 8 cut(s) 116, 395, 947, 992, 1031, 1188, 1343, 1405
Hpy8I GTNNAC 3 cut(s) 76, 842, 962
Hpy99I CGWCG 2 cut(s) 614, 830
HpyAV CCTTC 4 cut(s) 415, 470, 634, 1465
HpyCH4III ACNGT 4 cut(s) 617, 712, 1309, 1729
HpyCH4IV ACGT 1 cut(s) 240
HpyF3I CTNAG 6 cut(s) 56, 321, 725, 883, 1455, 1515
HpySE526I ACGT 1 cut(s) 240
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 8 cut(s) 119, 393, 448, 544, 874, 1028, 1095, 1514
HspAI GCGC 2 cut(s) 877, 879
KroI GCCGGC 1 cut(s) 831
KroNI GCCGGC 1 cut(s) 833
KspI CCGCGG 2 cut(s) 179, 689
Kzo9I GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
LmnI GCTCC 4 cut(s) 258, 337, 747, 1407
LweI GCATC 1 cut(s) 526
MaeI CTAG 4 cut(s) 63, 152, 1031, 1419
MaeII ACGT 1 cut(s) 240
MaeIII GTNAC 1 cut(s) 712
MalI GATC 6 cut(s) 131, 399, 1029, 1223, 1320, 1341
MboI GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
MboII GAAGA 8 cut(s) 21, 302, 306, 445, 448, 1168, 1245, 1457
MflI RGATCY 1 cut(s) 397
MhlI GDGCHC 4 cut(s) 599, 844, 1038, 1430
MlyI GAGTC 5 cut(s) 287, 305, 351, 377, 806
MmeI TCCRAC 6 cut(s) 333, 405, 450, 633, 884, 1579
MroNI GCCGGC 1 cut(s) 831
MroXI GAANNNNTTC 1 cut(s) 1649
MseI TTAA 3 cut(s) 695, 1229, 1713
MslI CAYNNNNRTG 3 cut(s) 1107, 1436, 1679
MspA1I CMGCKG 4 cut(s) 178, 688, 1481, 1538
MspI CCGG 8 cut(s) 300, 558, 832, 892, 1013, 1083, 1088, 1130
MspR9I CCNGG 7 cut(s) 208, 257, 848, 857, 893, 1083, 1131
Mva1269I GAATGC 1 cut(s) 581
MvaI CCWGG 4 cut(s) 208, 257, 848, 857
MvnI CGCG 6 cut(s) 158, 178, 591, 688, 879, 1344
NaeI GCCGGC 1 cut(s) 833
NciI CCSGG 3 cut(s) 893, 1083, 1131
NcoI CCATGG 1 cut(s) 540
NdeII GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
NgoMIV GCCGGC 1 cut(s) 831
NlaIII CATG 8 cut(s) 119, 393, 448, 544, 874, 1028, 1095, 1514
NlaIV GGNNCC 2 cut(s) 399, 1070
NmeAIII GCCGAG 3 cut(s) 204, 335, 886
NmuCI GTSAC 1 cut(s) 712
NruI TCGCGA 1 cut(s) 1344
NspI RCATGY 1 cut(s) 874
NspV TTCGAA 3 cut(s) 1584, 1604, 1610
PagI TCATGA 1 cut(s) 115
PasI CCCWGGG 1 cut(s) 847
PauI GCGCGC 1 cut(s) 877
PceI AGGCCT 1 cut(s) 453
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 1 cut(s) 581
PdiI GCCGGC 1 cut(s) 833
PdmI GAANNNNTTC 1 cut(s) 1649
PfeI GAWTC 6 cut(s) 231, 285, 325, 852, 1352, 1586
PfoI TCCNGGA 1 cut(s) 255
PleI GAGTC 5 cut(s) 287, 305, 350, 377, 805
PpsI GAGTC 5 cut(s) 287, 305, 350, 377, 805
Psp6I CCWGG 4 cut(s) 206, 255, 846, 855
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 4 cut(s) 206, 255, 846, 855
PspN4I GGNNCC 2 cut(s) 399, 1070
PspPI GGNCC 6 cut(s) 160, 544, 690, 1069, 1085, 1248
PstI CTGCAG 3 cut(s) 763, 1480, 1537
PsuI RGATCY 1 cut(s) 397
PteI GCGCGC 1 cut(s) 877
PvuII CAGCTG 1 cut(s) 1481
RruI TCGCGA 1 cut(s) 1344
RsaI GTAC 5 cut(s) 491, 890, 1052, 1118, 1394
RsaNI GTAC 5 cut(s) 490, 889, 1051, 1117, 1393
RseI CAYNNNNRTG 3 cut(s) 1107, 1436, 1679
Rsr2I CGGWCCG 1 cut(s) 1085
RsrII CGGWCCG 1 cut(s) 1085
SacII CCGCGG 2 cut(s) 179, 689
SaqAI TTAA 3 cut(s) 695, 1229, 1713
Sau3AI GATC 6 cut(s) 129, 397, 1027, 1221, 1318, 1339
Sau96I GGNCC 6 cut(s) 160, 544, 690, 1069, 1085, 1248
SchI GAGTC 5 cut(s) 287, 305, 351, 377, 806
ScrFI CCNGG 7 cut(s) 208, 257, 848, 857, 893, 1083, 1131
SduI GDGCHC 4 cut(s) 599, 844, 1038, 1430
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 3 cut(s) 759, 1476, 1533
Sfr303I CCGCGG 2 cut(s) 179, 689
SfuI TTCGAA 3 cut(s) 1584, 1604, 1610
SgrBI CCGCGG 2 cut(s) 179, 689
SinI GGWCC 4 cut(s) 690, 1069, 1085, 1248
SmiMI CAYNNNNRTG 3 cut(s) 1107, 1436, 1679
SmlI CTYRAG 1 cut(s) 1497
SmoI CTYRAG 1 cut(s) 1497
SseBI AGGCCT 1 cut(s) 453
SspMI CTAG 4 cut(s) 63, 152, 1031, 1419
StuI AGGCCT 1 cut(s) 453
StyD4I CCNGG 7 cut(s) 206, 255, 846, 855, 891, 1081, 1129
StyI CCWWGG 2 cut(s) 540, 1654
TaaI ACNGT 4 cut(s) 617, 712, 1309, 1729
TaiI ACGT 1 cut(s) 243
TaqI TCGA 9 cut(s) 183, 195, 288, 332, 825, 993, 1584, 1604, 1610
TaqII GACCGA 1 cut(s) 1086
TatI WGTACW 2 cut(s) 1050, 1392
TauI GCSGC 8 cut(s) 161, 181, 581, 591, 753, 1523, 1541, 1544
TfiI GAWTC 6 cut(s) 231, 285, 325, 852, 1352, 1586
Tru1I TTAA 3 cut(s) 695, 1229, 1713
Tru9I TTAA 3 cut(s) 695, 1229, 1713
TscAI CASTG 2 cut(s) 53, 1312
TseFI GTSAC 1 cut(s) 712
Tsp45I GTSAC 1 cut(s) 712
TspDTI ATGAA 4 cut(s) 132, 1303, 1619, 1623
TspRI CASTG 2 cut(s) 53, 1312
VneI GTGCAC 1 cut(s) 840
VpaK11BI GGWCC 4 cut(s) 690, 1069, 1085, 1248
XapI RAATTY 5 cut(s) 1125, 1580, 1600, 1606, 1690
XbaI TCTAGA 1 cut(s) 1030
XceI RCATGY 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XmiI GTMKAC 1 cut(s) 961
XmnI GAANNNNTTC 1 cut(s) 1649
XspI CTAG 4 cut(s) 63, 152, 1031, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.