Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0013684

Physical Location & Seq

Genomic Coordinates Forward (+)

14888344 .. 14890047

Gene Structure 1704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001378

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGCCTCCCACGCTGCCGCCGACGACCAAACCCTCAGGGCCGATAATTTTGTCAAGGCCGTCACCGTTAGGGTTCCGTCGACGCCGCGGAAGCTCCGCGACCGCGACGGCGACGACGGCGACTCCACTTGTTGCTCGGCGCGGAGTAGTCGGGCCGAGCTGGCCGCCAATTTCAAGCGAAGCGTGGCGCCGGCGCGGGTCATGTTCTACGAGAGCGGGTCGTGGACCAACTTTCCGGGCCGGGTCGTCGAATTGCTCCGGTCGGGTTTCTTTGAGCGCAAGGCGGTGCTCCACTTGGAAATCGAGGGGTCAACGTACCTGTTTGACTTCGCGCGCATGCTGCAGATTGATTCCAGCACCGGGAGTCAGCGATCGATTGCGTGGATTGACGACAACGGGAAATGCTTTTTTCCGAGGCGGTTCGTCAGCGACGAGCTGGGCTGTGGCGGGTCGGATAGTCCGAAGATTGAAATTGAGATCCGGGTCGACGTTTCGGGTCGGAGTTCGGGTAAGAGAAAAAGAGATGATGAGGTAGGAGAAGAAGAGAACGAAGTGACGTCGTTTAAGCGGCAGGCTCAGCCTCAGACAAACACAAAGCCTCAGAGCTCTTCGGAAACTTGGCCGAATGCGAAATTGTTGAGAGAGGGAGAGAGAGCTTACACGGCGGTGAGCAATTTCTTTCTCAAAGGGATTAGAAGAATCGATCCTGCGGCTACGATCAGTGCCATTCGTCAGTGTGTTCGCTCTGGGCCGTTGGATAAGGCTCGCTTGGAGGTCTTTCAGAAGCAAATTGAAATCGCCAAGGCAGCTCGGGGCTCGGCCAATGTGGTCCACGCTTGGTACGGCGCGTCGTCTAGAGATATACAGGGGATTTTGACTCATGGGTTTGGCTTGCCCAGCAAGGTTTCTGGGTCTCATGGTGTTGGTCTCTACCTATCTCATTTATCTTTACCTTTTAGTGGGCTCTTACAGCCCGATGATAATGGCGAAAAACATGTTCTTTTGTGCCGAGTTATATTAGGCAATGTTGAGAAAGTTGAGGCAGGTTCTCAGCAATGCTACCCTTCTAGTACGGAATTCGATACTGGTGTGGATGATCCTAGGACTCCTACTCGGTATGTGGTATGGCCCACTAATATGAATAGGCATGTTCTGCCCGAGTGTGTTGTGAGCTACAAACCTTCTGATCATGTGCCGGGTTCTCTGCCTAGAAAGTACCATGTTGCGGAATTGATTTCGAGGGTCAGGAATTCCCTACCCCCTTCAAAAGTTCAGCAATTGTCAAACCTGGTAAATGGTTTAAAGGCTGGGAAGTTACCAAGAAATGATTTCTGCAGACAGTTTCGATTAGTTGTTGGGGAGCAGTTGCTGCGTTCTGCAATTCCTGAGATGCGTGGCTCGGAACAAGGTTCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0010015 GO:0010101 GO:0010102 GO:0010154 GO:0010228 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST WWE

Protein Analysis

473

Amino Acids

52.21

Weight (kDa)

9.13

Isoelectric Point (pI)

44.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WWE_5	PF23467	58 - 137	1.9e-27	WWE domain
WWE	PF02825	72 - 127	6.3e-07	WWE domain
RST	PF12174	409 - 464	4.3e-11	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013684)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33460 FvH4_5g33460
malus_domestica	MD08G1211300.v1.1
prunus_persica	Prupe.1G543300_v2.0.a1
pyrus_communis	pycom08g18210 pycom15g35530
rosa_chinensis	RchiOBHm_Chr7g0232191
rosa_laevigata	RLG00000001378
rosa_multiflora	Rmu_co8293403.1_g000001 Rmu_sc0029785.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228680
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7AG424700 Rh7BG398800 Rh7CG445200 Rh7DG416700
rosa_wichuraiana	Rw7G035130 Rw7G035230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	560
Acc36I	ACCTGC	1 cut(s)	1034
AccB1I	GGYRCC	1 cut(s)	187
AccBSI	CCGCTC	1 cut(s)	216
AccI	GTMKAC	2 cut(s)	80, 486
AccII	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
AclWI	GGATC	3 cut(s)	472, 698, 1091
AcoI	YGGCCR	3 cut(s)	162, 620, 819
AcsI	RAATTY	2 cut(s)	1076, 1249
AcyI	GRCGYC	3 cut(s)	83, 188, 557
AfaI	GTAC	4 cut(s)	317, 842, 1072, 1217
AfiI	CCNNNNNNNGG	3 cut(s)	360, 959, 1225
AflIII	ACRYGT	1 cut(s)	994
AgsI	TTSAA	4 cut(s)	175, 470, 794, 1266
AjnI	CCWGG	1 cut(s)	1287
AleI	CACNNNNGTG	1 cut(s)	665
AluBI	AGCT	7 cut(s)	94, 160, 436, 606, 656, 809, 1173
AluI	AGCT	7 cut(s)	94, 160, 436, 606, 656, 809, 1173
Alw21I	GWGCWC	2 cut(s)	291, 608
Alw26I	GTCTC	2 cut(s)	918, 932
AlwI	GGATC	3 cut(s)	472, 698, 1091
AlwNI	CAGNNNCTG	1 cut(s)	1369
Ama87I	CYCGRG	2 cut(s)	810, 1157
ApeKI	GCWGC	4 cut(s)	14, 340, 806, 1369
ApoI	RAATTY	2 cut(s)	1076, 1249
AspA2I	CCTAGG	1 cut(s)	1100
AspLEI	GCGC	7 cut(s)	142, 190, 196, 279, 334, 336, 848
AspS9I	GGNCC	7 cut(s)	39, 153, 225, 238, 749, 829, 1128
AsuC2I	CCSGG	5 cut(s)	237, 242, 361, 482, 1197
AsuHPI	GGTGA	2 cut(s)	55, 679
AvaI	CYCGRG	2 cut(s)	810, 1157
AvaII	GGWCC	2 cut(s)	225, 829
AvrII	CCTAGG	1 cut(s)	1100
AxyI	CCTNAGG	1 cut(s)	35
BaeI	ACNNNNGTAYC	2 cut(s)	1074, 1107
BanI	GGYRCC	1 cut(s)	187
BanII	GRGCYC	3 cut(s)	608, 818, 966
Bbv12I	GWGCWC	2 cut(s)	291, 608
BbvI	GCAGC	3 cut(s)	327, 818, 1356
BceAI	ACGGC	6 cut(s)	44, 124, 133, 678, 736, 859
BciT130I	CCWGG	1 cut(s)	1289
BclI	TGATCA	1 cut(s)	1186
BcnI	CCSGG	5 cut(s)	237, 242, 361, 482, 1197
BcoDI	GTCTC	2 cut(s)	918, 932
BfaI	CTAG	4 cut(s)	855, 1068, 1101, 1209
BfmI	CTRYAG	2 cut(s)	341, 1333
BfoI	RGCGCY	1 cut(s)	191
BfuAI	ACCTGC	1 cut(s)	1034
BglI	GCCNNNNNGGC	1 cut(s)	161
BisI	GCNGC	9 cut(s)	15, 18, 86, 165, 341, 569, 711, 807, 1370
BlnI	CCTAGG	1 cut(s)	1100
BlpI	GCTNAGC	1 cut(s)	576
BlsI	GCNGC	9 cut(s)	16, 19, 87, 166, 342, 570, 712, 808, 1371
Bme1390I	CCNGG	6 cut(s)	237, 242, 361, 482, 1197, 1289
Bme18I	GGWCC	2 cut(s)	225, 829
BmeT110I	CYCGRG	2 cut(s)	810, 1157
BmgT120I	GGNCC	7 cut(s)	39, 153, 225, 238, 749, 829, 1128
BmiI	GGNNCC	2 cut(s)	75, 189
BmrFI	CCNGG	6 cut(s)	237, 242, 361, 482, 1197, 1289
BmsI	GCATC	1 cut(s)	1380
Bpu1102I	GCTNAGC	1 cut(s)	576
BpuMI	CCSGG	5 cut(s)	237, 242, 361, 482, 1197
Bsa29I	ATCGAT	2 cut(s)	374, 702
BsaHI	GRCGYC	3 cut(s)	83, 188, 557
BsaI	GGTCTC	2 cut(s)	918, 932
BsaJI	CCNNGG	4 cut(s)	86, 413, 801, 1100
BsaWI	WCCGGW	1 cut(s)	258
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 493, 523
Bsc4I	CCNNNNNNNGG	3 cut(s)	360, 959, 1225
Bse118I	RCCGGY	1 cut(s)	190
Bse1I	ACTGG	1 cut(s)	1090
Bse21I	CCTNAGG	1 cut(s)	35
Bse3DI	GCAATG	2 cut(s)	1030, 1061
BseBI	CCWGG	1 cut(s)	1289
BseCI	ATCGAT	2 cut(s)	374, 702
BseDI	CCNNGG	4 cut(s)	86, 413, 801, 1100
BseGI	GGATG	1 cut(s)	1099
BseLI	CCNNNNNNNGG	3 cut(s)	360, 959, 1225
BseMI	GCAATG	2 cut(s)	1030, 1061
BseMII	CTCAG	6 cut(s)	49, 590, 596, 614, 1064, 1377
BseNI	ACTGG	1 cut(s)	1090
BsePI	GCGCGC	1 cut(s)	332
BseXI	GCAGC	3 cut(s)	327, 818, 1356
BseYI	CCCAGC	3 cut(s)	436, 896, 1307
Bsh1236I	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
Bsh1285I	CGRYCG	3 cut(s)	103, 263, 374
BshNI	GGYRCC	1 cut(s)	187
BshVI	ATCGAT	2 cut(s)	374, 702
BsiEI	CGRYCG	3 cut(s)	103, 263, 374
BsiHKAI	GWGCWC	2 cut(s)	291, 608
BsiHKCI	CYCGRG	2 cut(s)	810, 1157
BsiSI	CCGG	7 cut(s)	191, 236, 241, 259, 360, 481, 1196
BslI	CCNNNNNNNGG	3 cut(s)	360, 959, 1225
BsmAI	GTCTC	2 cut(s)	918, 932
BsmI	GAATGC	1 cut(s)	631
Bso31I	GGTCTC	2 cut(s)	918, 932
BsoBI	CYCGRG	2 cut(s)	810, 1157
Bsp1286I	GDGCHC	4 cut(s)	291, 608, 818, 966
Bsp143I	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
Bsp1720I	GCTNAGC	1 cut(s)	576
BspCNI	CTCAG	6 cut(s)	48, 589, 595, 613, 1063, 1378
BspDI	ATCGAT	2 cut(s)	374, 702
BspFNI	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
BspLI	GGNNCC	2 cut(s)	75, 189
BspMAI	CTGCAG	2 cut(s)	345, 1337
BspMI	ACCTGC	1 cut(s)	1034
BspPI	GGATC	3 cut(s)	472, 698, 1091
BspQI	GCTCTTC	1 cut(s)	613
BspT107I	GGYRCC	1 cut(s)	187
BspTNI	GGTCTC	2 cut(s)	918, 932
BsrBI	CCGCTC	1 cut(s)	216
BsrDI	GCAATG	2 cut(s)	1030, 1061
BsrFI	RCCGGY	1 cut(s)	190
BsrI	ACTGG	1 cut(s)	1090
BssAI	RCCGGY	1 cut(s)	190
BssECI	CCNNGG	4 cut(s)	86, 413, 801, 1100
BssHII	GCGCGC	1 cut(s)	332
BssMI	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
BssNI	GRCGYC	3 cut(s)	83, 188, 557
BssT1I	CCWWGG	2 cut(s)	801, 1100
Bst2UI	CCWGG	1 cut(s)	1289
Bst4CI	ACNGT	2 cut(s)	67, 1341
Bst6I	CTCTTC	2 cut(s)	537, 613
BstACI	GRCGYC	3 cut(s)	83, 188, 557
BstAPI	GCANNNNNTGC	2 cut(s)	1153, 1369
BstC8I	GCNNGC	7 cut(s)	162, 192, 334, 338, 573, 766, 893
BstDEI	CTNAG	7 cut(s)	35, 576, 582, 600, 1050, 1386, 1416
BstDSI	CCRYGG	1 cut(s)	86
BstF5I	GGATG	1 cut(s)	1099
BstFNI	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
BstH2I	RGCGCY	1 cut(s)	191
BstHHI	GCGC	7 cut(s)	142, 190, 196, 279, 334, 336, 848
BstKTI	GATC	6 cut(s)	374, 480, 706, 720, 1099, 1189
BstMAI	GTCTC	2 cut(s)	918, 932
BstMBI	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
BstMCI	CGRYCG	3 cut(s)	103, 263, 374
BstNI	CCWGG	1 cut(s)	1289
BstNSI	RCATGY	3 cut(s)	340, 998, 1151
BstSCI	CCNGG	6 cut(s)	235, 240, 359, 480, 1195, 1287
BstSFI	CTRYAG	2 cut(s)	341, 1333
BstUI	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
BstV1I	GCAGC	3 cut(s)	327, 818, 1356
BstX2I	RGATCY	1 cut(s)	477
BstYI	RGATCY	1 cut(s)	477
Bsu15I	ATCGAT	2 cut(s)	374, 702
Bsu36I	CCTNAGG	1 cut(s)	35
BsuTUI	ATCGAT	2 cut(s)	374, 702
BtgI	CCRYGG	1 cut(s)	86
BtsCI	GGATG	1 cut(s)	1099
BtsIMutI	CAGTG	2 cut(s)	727, 740
BveI	ACCTGC	1 cut(s)	1034
Cac8I	GCNNGC	7 cut(s)	162, 192, 334, 338, 573, 766, 893
CaiI	CAGNNNCTG	1 cut(s)	1369
CfoI	GCGC	7 cut(s)	142, 190, 196, 279, 334, 336, 848
Cfr10I	RCCGGY	1 cut(s)	190
Cfr13I	GGNCC	7 cut(s)	39, 153, 225, 238, 749, 829, 1128
Cfr42I	CCGCGG	1 cut(s)	89
ClaI	ATCGAT	2 cut(s)	374, 702
CseI	GACGC	2 cut(s)	91, 837
CsiI	ACCWGGT	1 cut(s)	1287
Csp6I	GTAC	4 cut(s)	316, 841, 1071, 1216
CviAII	CATG	8 cut(s)	202, 337, 881, 917, 995, 1148, 1190, 1220
CviQI	GTAC	4 cut(s)	316, 841, 1071, 1216
DdeI	CTNAG	7 cut(s)	35, 576, 582, 600, 1050, 1386, 1416
DinI	GGCGCC	1 cut(s)	189
DpnI	GATC	6 cut(s)	373, 479, 705, 719, 1098, 1188
DpnII	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
DraI	TTTAAA	1 cut(s)	1302
EaeI	YGGCCR	3 cut(s)	162, 620, 819
Eam1104I	CTCTTC	2 cut(s)	537, 613
EarI	CTCTTC	2 cut(s)	537, 613
Ecl136II	GAGCTC	1 cut(s)	606
Eco130I	CCWWGG	2 cut(s)	801, 1100
Eco24I	GRGCYC	3 cut(s)	608, 818, 966
Eco31I	GGTCTC	2 cut(s)	918, 932
Eco47I	GGWCC	2 cut(s)	225, 829
Eco53kI	GAGCTC	1 cut(s)	606
Eco81I	CCTNAGG	1 cut(s)	35
Eco88I	CYCGRG	2 cut(s)	810, 1157
EcoICRI	GAGCTC	1 cut(s)	606
EcoRI	GAATTC	2 cut(s)	1076, 1249
EcoRII	CCWGG	1 cut(s)	1287
EcoT14I	CCWWGG	2 cut(s)	801, 1100
EcoT38I	GRGCYC	3 cut(s)	608, 818, 966
EgeI	GGCGCC	1 cut(s)	189
EheI	GGCGCC	1 cut(s)	189
ErhI	CCWWGG	2 cut(s)	801, 1100
FaeI	CATG	8 cut(s)	205, 340, 884, 920, 998, 1151, 1193, 1223
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FatI	CATG	8 cut(s)	201, 336, 880, 916, 994, 1147, 1189, 1219
FauI	CCCGC	3 cut(s)	189, 209, 440
FbaI	TGATCA	1 cut(s)	1186
FblI	GTMKAC	2 cut(s)	80, 486
Fnu4HI	GCNGC	9 cut(s)	15, 18, 86, 165, 341, 569, 711, 807, 1370
FokI	GGATG	1 cut(s)	1106
FriOI	GRGCYC	3 cut(s)	608, 818, 966
Fsp4HI	GCNGC	9 cut(s)	15, 18, 86, 165, 341, 569, 711, 807, 1370
FspBI	CTAG	4 cut(s)	855, 1068, 1101, 1209
GlaI	GCGC	7 cut(s)	141, 189, 195, 278, 333, 335, 847
GluI	GCNGC	9 cut(s)	15, 18, 86, 165, 341, 569, 711, 807, 1370
GsaI	CCCAGC	3 cut(s)	440, 900, 1311
HaeII	RGCGCY	1 cut(s)	191
HapII	CCGG	7 cut(s)	191, 236, 241, 259, 360, 481, 1196
HgaI	GACGC	2 cut(s)	91, 837
HhaI	GCGC	7 cut(s)	142, 190, 196, 279, 334, 336, 848
Hin1I	GRCGYC	3 cut(s)	83, 188, 557
Hin1II	CATG	8 cut(s)	205, 340, 884, 920, 998, 1151, 1193, 1223
Hin6I	GCGC	7 cut(s)	140, 188, 194, 277, 332, 334, 846
HinP1I	GCGC	7 cut(s)	140, 188, 194, 277, 332, 334, 846
HincII	GTYRAC	3 cut(s)	81, 312, 487
HindII	GTYRAC	3 cut(s)	81, 312, 487
HinfI	GANTC	6 cut(s)	122, 350, 364, 699, 877, 1105
HpaII	CCGG	7 cut(s)	191, 236, 241, 259, 360, 481, 1196
HphI	GGTGA	2 cut(s)	55, 679
Hpy166II	GTNNAC	5 cut(s)	81, 225, 312, 487, 832
Hpy188III	TCNNGA	3 cut(s)	855, 1246, 1385
Hpy8I	GTNNAC	5 cut(s)	81, 225, 312, 487, 832
HpyAV	CCTTC	3 cut(s)	1074, 1191, 1272
HpyCH4III	ACNGT	2 cut(s)	67, 1341
HpyCH4IV	ACGT	3 cut(s)	314, 489, 557
HpyCH4V	TGCA	3 cut(s)	343, 1335, 1379
HpyF3I	CTNAG	7 cut(s)	35, 576, 582, 600, 1050, 1386, 1416
HpySE526I	ACGT	3 cut(s)	314, 489, 557
Hsp92I	GRCGYC	3 cut(s)	83, 188, 557
Hsp92II	CATG	8 cut(s)	205, 340, 884, 920, 998, 1151, 1193, 1223
HspAI	GCGC	7 cut(s)	140, 188, 194, 277, 332, 334, 846
KasI	GGCGCC	1 cut(s)	187
KroI	GCCGGC	1 cut(s)	190
KroNI	GCCGGC	1 cut(s)	192
Ksp22I	TGATCA	1 cut(s)	1186
KspI	CCGCGG	1 cut(s)	89
Kzo9I	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
LguI	GCTCTTC	1 cut(s)	613
LmnI	GCTCC	4 cut(s)	99, 261, 294, 1360
Lsp1109I	GCAGC	3 cut(s)	327, 818, 1356
LweI	GCATC	1 cut(s)	1380
MabI	ACCWGGT	1 cut(s)	1287
MaeI	CTAG	4 cut(s)	855, 1068, 1101, 1209
MaeII	ACGT	3 cut(s)	314, 489, 557
MaeIII	GTNAC	3 cut(s)	61, 553, 1314
MalI	GATC	6 cut(s)	373, 479, 705, 719, 1098, 1188
MbiI	CCGCTC	1 cut(s)	216
MboI	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
MboII	GAAGA	5 cut(s)	475, 551, 554, 600, 708
MfeI	CAATTG	1 cut(s)	1277
MflI	RGATCY	1 cut(s)	477
MhlI	GDGCHC	4 cut(s)	291, 608, 818, 966
Mly113I	GGCGCC	1 cut(s)	188
MlyI	GAGTC	4 cut(s)	116, 373, 871, 1099
MmeI	TCCRAC	3 cut(s)	432, 479, 735
MreI	CGCCGGCG	1 cut(s)	190
MroNI	GCCGGC	1 cut(s)	190
MseI	TTAA	2 cut(s)	564, 1301
MslI	CAYNNNNRTG	2 cut(s)	665, 1136
MspA1I	CMGCKG	1 cut(s)	88
MspI	CCGG	7 cut(s)	191, 236, 241, 259, 360, 481, 1196
MspR9I	CCNGG	6 cut(s)	237, 242, 361, 482, 1197, 1289
MunI	CAATTG	1 cut(s)	1277
Mva1269I	GAATGC	1 cut(s)	631
MvaI	CCWGG	1 cut(s)	1289
MvnI	CGCG	8 cut(s)	88, 99, 105, 142, 196, 332, 334, 848
NaeI	GCCGGC	1 cut(s)	192
NarI	GGCGCC	1 cut(s)	188
NciI	CCSGG	5 cut(s)	237, 242, 361, 482, 1197
NdeII	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
NgoMIV	GCCGGC	1 cut(s)	190
NlaIII	CATG	8 cut(s)	205, 340, 884, 920, 998, 1151, 1193, 1223
NlaIV	GGNNCC	2 cut(s)	75, 189
NmeAIII	GCCGAG	4 cut(s)	116, 181, 797, 1034
NmuCI	GTSAC	2 cut(s)	61, 553
NspI	RCATGY	3 cut(s)	340, 998, 1151
OliI	CACNNNNGTG	1 cut(s)	665
PaeI	GCATGC	1 cut(s)	340
PauI	GCGCGC	1 cut(s)	332
PciI	ACATGT	1 cut(s)	994
PciSI	GCTCTTC	1 cut(s)	613
PcsI	WCGNNNNNNNCGW	3 cut(s)	18, 429, 458
PctI	GAATGC	1 cut(s)	631
PdiI	GCCGGC	1 cut(s)	192
PfeI	GAWTC	2 cut(s)	350, 699
PkrI	GCNGC	9 cut(s)	16, 19, 87, 166, 342, 570, 712, 808, 1371
Ple19I	CGATCG	1 cut(s)	374
PleI	GAGTC	4 cut(s)	116, 372, 871, 1099
PluTI	GGCGCC	1 cut(s)	191
PpsI	GAGTC	4 cut(s)	116, 372, 871, 1099
PscI	ACATGT	1 cut(s)	994
Psp124BI	GAGCTC	1 cut(s)	608
Psp6I	CCWGG	1 cut(s)	1287
PspFI	CCCAGC	3 cut(s)	436, 896, 1307
PspGI	CCWGG	1 cut(s)	1287
PspN4I	GGNNCC	2 cut(s)	75, 189
PspPI	GGNCC	7 cut(s)	39, 153, 225, 238, 749, 829, 1128
PstI	CTGCAG	2 cut(s)	345, 1337
PstNI	CAGNNNCTG	1 cut(s)	1369
PsuI	RGATCY	1 cut(s)	477
PteI	GCGCGC	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	374
RsaI	GTAC	4 cut(s)	317, 842, 1072, 1217
RsaNI	GTAC	4 cut(s)	316, 841, 1071, 1216
RseI	CAYNNNNRTG	2 cut(s)	665, 1136
SacI	GAGCTC	1 cut(s)	608
SacII	CCGCGG	1 cut(s)	89
SalI	GTCGAC	2 cut(s)	79, 485
SapI	GCTCTTC	1 cut(s)	613
SaqAI	TTAA	2 cut(s)	564, 1301
SatI	GCNGC	9 cut(s)	15, 18, 86, 165, 341, 569, 711, 807, 1370
Sau3AI	GATC	6 cut(s)	371, 477, 703, 717, 1096, 1186
Sau96I	GGNCC	7 cut(s)	39, 153, 225, 238, 749, 829, 1128
SchI	GAGTC	4 cut(s)	116, 373, 871, 1099
ScrFI	CCNGG	6 cut(s)	237, 242, 361, 482, 1197, 1289
SduI	GDGCHC	4 cut(s)	291, 608, 818, 966
SexAI	ACCWGGT	1 cut(s)	1287
SfaNI	GCATC	1 cut(s)	1380
SfcI	CTRYAG	2 cut(s)	341, 1333
SfiI	GGCCNNNNNGGCC	1 cut(s)	161
SfoI	GGCGCC	1 cut(s)	189
Sfr303I	CCGCGG	1 cut(s)	89
SgrAI	CRCCGGYG	1 cut(s)	190
SgrBI	CCGCGG	1 cut(s)	89
SgrDI	CGTCGACG	1 cut(s)	79
SinI	GGWCC	2 cut(s)	225, 829
SmiMI	CAYNNNNRTG	2 cut(s)	665, 1136
SphI	GCATGC	1 cut(s)	340
SspDI	GGCGCC	1 cut(s)	187
SspMI	CTAG	4 cut(s)	855, 1068, 1101, 1209
SstI	GAGCTC	1 cut(s)	608
StyD4I	CCNGG	6 cut(s)	235, 240, 359, 480, 1195, 1287
StyI	CCWWGG	2 cut(s)	801, 1100
TaaI	ACNGT	2 cut(s)	67, 1341
TaiI	ACGT	3 cut(s)	317, 492, 560
TaqI	TCGA	9 cut(s)	80, 249, 303, 374, 486, 702, 1080, 1238, 1345
TauI	GCSGC	5 cut(s)	20, 88, 167, 571, 713
TfiI	GAWTC	2 cut(s)	350, 699
Tru1I	TTAA	2 cut(s)	564, 1301
Tru9I	TTAA	2 cut(s)	564, 1301
TscAI	CASTG	2 cut(s)	727, 740
TseFI	GTSAC	2 cut(s)	61, 553
TseI	GCWGC	4 cut(s)	14, 340, 806, 1369
Tsp45I	GTSAC	2 cut(s)	61, 553
TspDTI	ATGAA	1 cut(s)	1154
TspGWI	ACGGA	2 cut(s)	66, 1088
TspRI	CASTG	2 cut(s)	727, 740
VpaK11BI	GGWCC	2 cut(s)	225, 829
XapI	RAATTY	2 cut(s)	1076, 1249
XbaI	TCTAGA	1 cut(s)	854
XceI	RCATGY	3 cut(s)	340, 998, 1151
XmaJI	CCTAGG	1 cut(s)	1100
XmiI	GTMKAC	2 cut(s)	80, 486
XspI	CTAG	4 cut(s)	855, 1068, 1101, 1209
ZraI	GACGTC	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.