Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0013684

Physical Location & Seq

Genomic Coordinates Reverse (-)

58439695 .. 58445858

Gene Structure 6164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG445200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCCTCCCACGCCGCCGCCGACGACCAAACCCTCAGGGCCGATAATTTCGTCAAGGCCGTCACCGTTAGGGTTCCGTCGACGCCGCGAAAGCTCCGCGACGACGACGGCGACGACGGTGACTCCACTTGTTGCTCGGCGCGGAGTAGTCGGGCCGAGCTGGCAGCCAATTTCAAGCGCAGCGTGGCGCCGGCGCGGGTCATGTTCTACGAGAGCGGGTCCTGGACCAACTTCCCGGGCCGGGTCGTCGAATTGCTCCGGTCGGGTTTCTTTGAGCGCAAGGCGGTGCTCCACTTGGAAATCGAGGGGTCAACGTACCTGTTTGACTTCGCGCGCATGCTGCAGATTGATTCCGGCACCGGGAGTCAGCGATCGATTGCGTGGATTGACGACAACGGGAAATGCTTTTTTCCGAGGCGGTTTATCAGCGACGAGCTGGGCTGTGGCGGGTCGGATAGTCCGAAGATCGAAATTGAGATCCGGGTTGACGTTTCGGGTCGGAGTTCGGGTAAGAGAAAAAGAGATGATGAGGTAGGAGAAGAAGAGAACGAAGTGACGTCGTTTAAGCGGCAGGCTCAGCCTCAGACAAACCCAAAGCCTCAGAGCTCTTCGGAGACTTGGCCGAATGTGAAATTGTTGAGAGAGGGAGAGAGAGCTTACACGGCGGTGAGCAATTTCTTTCTCAAAGGGATCAGAAGAATCGATCCTGCGGCTACGATCAGTGCCATTCGTCAGTGTGTTCGCTCTGGGCCGTTGGATAAGGCTCGCTTGGAGGTCTTCCAGAAACAAATTGAAATCACCAAGGCAGCTCGGGGCTCGGCCAATGTGGTCCACGCTTGGTACGGCGCGTCGTCTAGAGATATACAGGGGATTTTGACTCATGGGTTTGGCTTGCCCAGCAAGGTTTCTGGGTCTCATGGTGTTGGTCTCTACCTATCTCATTTATCTTTACCTTTTAGTAGTGGGCTCTTACAGCCCGATGATAATGGCGAAAAACATGTTCTTTTGTGCCGAGTTATATTAGGCAATGTTGAGAAAGTTGAGGCAGGGTCTCAGCAATGCTACCCTTCTAGTATGGAATTCGATACTGGTGTGGATGATCCTAGGACTCCTACGCGGTATGTGGTATGGCCCACTAATATGAATAGGCACGTTCTGCCGGAGTGTGTTGTGAGCTATAAACCTTCTGATCATGTGCCGGGTTCTCTGCCTAGAAAGTACCATGTTGCGGAATTGATTTCGAGGGTCAGGAATTCCCTACCCCCTTCAAAAGTTCAGCAATTGTCGAATCTGGTACATGGTTTAAAGGCTGGGAAGTTAGCAAGAAATGATTTCTGCAGACAGTTTCGATTAGTTGTTGGGGAGCAGTTGCTGCGTTCTGCAATTCCTGAGATGCGTGGCTCAGAACAAGGTTCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0010015 GO:0010101 GO:0010102 GO:0010154 GO:0010228 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST WWE

Protein Analysis

473

Amino Acids

52.32

Weight (kDa)

8.96

Isoelectric Point (pI)

44.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WWE_5	PF23467	58 - 137	4.4e-27	WWE domain
WWE	PF02825	72 - 127	1.4e-06	WWE domain
RST	PF12174	410 - 465	2.3e-10	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013684)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33460 FvH4_5g33460
malus_domestica	MD08G1211300.v1.1
prunus_persica	Prupe.1G543300_v2.0.a1
pyrus_communis	pycom08g18210 pycom15g35530
rosa_chinensis	RchiOBHm_Chr7g0232191
rosa_laevigata	RLG00000001378
rosa_multiflora	Rmu_co8293403.1_g000001 Rmu_sc0029785.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228680
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7AG424700 Rh7BG398800 Rh7CG445200 Rh7DG416700
rosa_wichuraiana	Rw7G035130 Rw7G035230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	560
AccB1I	GGYRCC	2 cut(s)	187, 356
AccBSI	CCGCTC	1 cut(s)	216
AccI	GTMKAC	1 cut(s)	80
AccII	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
AclWI	GGATC	4 cut(s)	472, 698, 698, 1094
AcoI	YGGCCR	2 cut(s)	620, 819
AcsI	RAATTY	2 cut(s)	1079, 1252
AcyI	GRCGYC	3 cut(s)	83, 188, 557
AfaI	GTAC	4 cut(s)	317, 842, 1220, 1296
AfiI	CCNNNNNNNGG	3 cut(s)	241, 360, 1228
AflIII	ACRYGT	1 cut(s)	997
AgsI	TTSAA	3 cut(s)	175, 794, 1269
AjnI	CCWGG	1 cut(s)	221
AleI	CACNNNNGTG	1 cut(s)	665
AluBI	AGCT	7 cut(s)	94, 160, 436, 606, 656, 809, 1176
AluI	AGCT	7 cut(s)	94, 160, 436, 606, 656, 809, 1176
Alw21I	GWGCWC	2 cut(s)	291, 608
Alw26I	GTCTC	4 cut(s)	608, 918, 932, 1056
AlwI	GGATC	4 cut(s)	472, 698, 698, 1094
AlwNI	CAGNNNCTG	1 cut(s)	1372
Ama87I	CYCGRG	2 cut(s)	235, 810
AoxI	GGCC	9 cut(s)	3, 39, 57, 153, 238, 620, 749, 819, 1130
ApeKI	GCWGC	5 cut(s)	164, 180, 340, 806, 1372
ApoI	RAATTY	2 cut(s)	1079, 1252
AspA2I	CCTAGG	1 cut(s)	1103
AspLEI	GCGC	8 cut(s)	142, 180, 190, 196, 279, 334, 336, 848
AspS9I	GGNCC	8 cut(s)	39, 153, 219, 225, 238, 749, 829, 1131
AsuC2I	CCSGG	6 cut(s)	236, 237, 242, 361, 482, 1200
AsuHPI	GGTGA	4 cut(s)	55, 131, 679, 790
AvaI	CYCGRG	2 cut(s)	235, 810
AvaII	GGWCC	3 cut(s)	219, 225, 829
AvrII	CCTAGG	1 cut(s)	1103
AxyI	CCTNAGG	1 cut(s)	35
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BanI	GGYRCC	2 cut(s)	187, 356
BanII	GRGCYC	3 cut(s)	608, 818, 969
BbsI	GAAGAC	1 cut(s)	769
Bbv12I	GWGCWC	2 cut(s)	291, 608
BbvI	GCAGC	5 cut(s)	176, 192, 327, 818, 1359
BceAI	ACGGC	5 cut(s)	44, 124, 678, 736, 859
BciT130I	CCWGG	1 cut(s)	223
BclI	TGATCA	1 cut(s)	1189
BcnI	CCSGG	6 cut(s)	236, 237, 242, 361, 482, 1200
BcoDI	GTCTC	4 cut(s)	608, 918, 932, 1056
BfaI	CTAG	4 cut(s)	855, 1071, 1104, 1212
BfmI	CTRYAG	2 cut(s)	341, 1336
BfoI	RGCGCY	1 cut(s)	191
BglI	GCCNNNNNGGC	1 cut(s)	161
BlnI	CCTAGG	1 cut(s)	1103
BlpI	GCTNAGC	1 cut(s)	576
Bme1390I	CCNGG	7 cut(s)	223, 236, 237, 242, 361, 482, 1200
Bme18I	GGWCC	3 cut(s)	219, 225, 829
BmeT110I	CYCGRG	2 cut(s)	235, 810
BmgT120I	GGNCC	8 cut(s)	39, 153, 219, 225, 238, 749, 829, 1131
BmiI	GGNNCC	4 cut(s)	75, 189, 220, 358
BmrFI	CCNGG	7 cut(s)	223, 236, 237, 242, 361, 482, 1200
BmsI	GCATC	1 cut(s)	1383
BpiI	GAAGAC	1 cut(s)	769
Bpu1102I	GCTNAGC	1 cut(s)	576
BpuMI	CCSGG	6 cut(s)	236, 237, 242, 361, 482, 1200
Bsa29I	ATCGAT	2 cut(s)	374, 702
BsaHI	GRCGYC	3 cut(s)	83, 188, 557
BsaI	GGTCTC	3 cut(s)	918, 932, 1056
BsaJI	CCNNGG	4 cut(s)	235, 413, 801, 1103
BsaWI	WCCGGW	1 cut(s)	258
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 493, 523
Bsc4I	CCNNNNNNNGG	3 cut(s)	241, 360, 1228
Bse118I	RCCGGY	1 cut(s)	190
Bse1I	ACTGG	1 cut(s)	1093
Bse21I	CCTNAGG	1 cut(s)	35
Bse3DI	GCAATG	2 cut(s)	1033, 1064
BseBI	CCWGG	1 cut(s)	223
BseCI	ATCGAT	2 cut(s)	374, 702
BseDI	CCNNGG	4 cut(s)	235, 413, 801, 1103
BseGI	GGATG	1 cut(s)	1102
BseLI	CCNNNNNNNGG	3 cut(s)	241, 360, 1228
BseMI	GCAATG	2 cut(s)	1033, 1064
BseMII	CTCAG	7 cut(s)	49, 590, 596, 614, 1067, 1380, 1416
BseNI	ACTGG	1 cut(s)	1093
BsePI	GCGCGC	1 cut(s)	332
BseXI	GCAGC	5 cut(s)	176, 192, 327, 818, 1359
BseYI	CCCAGC	3 cut(s)	436, 896, 1310
Bsh1236I	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
Bsh1285I	CGRYCG	2 cut(s)	263, 374
BshFI	GGCC	9 cut(s)	5, 41, 59, 155, 240, 622, 751, 821, 1132
BshNI	GGYRCC	2 cut(s)	187, 356
BshVI	ATCGAT	2 cut(s)	374, 702
BsiEI	CGRYCG	2 cut(s)	263, 374
BsiHKAI	GWGCWC	2 cut(s)	291, 608
BsiHKCI	CYCGRG	2 cut(s)	235, 810
BsiSI	CCGG	9 cut(s)	191, 236, 241, 259, 354, 360, 481, 1160, 1199
BslI	CCNNNNNNNGG	3 cut(s)	241, 360, 1228
BsmAI	GTCTC	4 cut(s)	608, 918, 932, 1056
BsnI	GGCC	9 cut(s)	5, 41, 59, 155, 240, 622, 751, 821, 1132
Bso31I	GGTCTC	3 cut(s)	918, 932, 1056
BsoBI	CYCGRG	2 cut(s)	235, 810
Bsp1286I	GDGCHC	4 cut(s)	291, 608, 818, 969
Bsp143I	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
Bsp1720I	GCTNAGC	1 cut(s)	576
BspANI	GGCC	9 cut(s)	5, 41, 59, 155, 240, 622, 751, 821, 1132
BspCNI	CTCAG	7 cut(s)	48, 589, 595, 613, 1066, 1381, 1415
BspDI	ATCGAT	2 cut(s)	374, 702
BspFNI	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
BspLI	GGNNCC	4 cut(s)	75, 189, 220, 358
BspMAI	CTGCAG	2 cut(s)	345, 1340
BspPI	GGATC	4 cut(s)	472, 698, 698, 1094
BspQI	GCTCTTC	1 cut(s)	613
BspT107I	GGYRCC	2 cut(s)	187, 356
BspTNI	GGTCTC	3 cut(s)	918, 932, 1056
BsrBI	CCGCTC	1 cut(s)	216
BsrDI	GCAATG	2 cut(s)	1033, 1064
BsrFI	RCCGGY	1 cut(s)	190
BsrI	ACTGG	1 cut(s)	1093
BssAI	RCCGGY	1 cut(s)	190
BssECI	CCNNGG	4 cut(s)	235, 413, 801, 1103
BssHII	GCGCGC	1 cut(s)	332
BssMI	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
BssNI	GRCGYC	3 cut(s)	83, 188, 557
BssT1I	CCWWGG	2 cut(s)	801, 1103
Bst2UI	CCWGG	1 cut(s)	223
Bst4CI	ACNGT	3 cut(s)	67, 119, 1344
Bst6I	CTCTTC	2 cut(s)	537, 613
BstACI	GRCGYC	3 cut(s)	83, 188, 557
BstAPI	GCANNNNNTGC	2 cut(s)	1156, 1372
BstC8I	GCNNGC	7 cut(s)	162, 192, 334, 338, 573, 766, 893
BstDEI	CTNAG	8 cut(s)	35, 576, 582, 600, 1053, 1389, 1402, 1419
BstF5I	GGATG	1 cut(s)	1102
BstFNI	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
BstH2I	RGCGCY	1 cut(s)	191
BstHHI	GCGC	8 cut(s)	142, 180, 190, 196, 279, 334, 336, 848
BstKTI	GATC	8 cut(s)	374, 468, 480, 693, 706, 720, 1102, 1192
BstMAI	GTCTC	4 cut(s)	608, 918, 932, 1056
BstMBI	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
BstMCI	CGRYCG	2 cut(s)	263, 374
BstNI	CCWGG	1 cut(s)	223
BstNSI	RCATGY	2 cut(s)	340, 1001
BstSCI	CCNGG	7 cut(s)	221, 234, 235, 240, 359, 480, 1198
BstSFI	CTRYAG	2 cut(s)	341, 1336
BstUI	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
BstV1I	GCAGC	5 cut(s)	176, 192, 327, 818, 1359
BstV2I	GAAGAC	1 cut(s)	769
BstX2I	RGATCY	1 cut(s)	477
BstYI	RGATCY	1 cut(s)	477
Bsu15I	ATCGAT	2 cut(s)	374, 702
Bsu36I	CCTNAGG	1 cut(s)	35
BsuRI	GGCC	9 cut(s)	5, 41, 59, 155, 240, 622, 751, 821, 1132
BsuTUI	ATCGAT	2 cut(s)	374, 702
BtsCI	GGATG	1 cut(s)	1102
BtsIMutI	CAGTG	2 cut(s)	727, 740
Cac8I	GCNNGC	7 cut(s)	162, 192, 334, 338, 573, 766, 893
CaiI	CAGNNNCTG	1 cut(s)	1372
CfoI	GCGC	8 cut(s)	142, 180, 190, 196, 279, 334, 336, 848
Cfr10I	RCCGGY	1 cut(s)	190
Cfr13I	GGNCC	8 cut(s)	39, 153, 219, 225, 238, 749, 829, 1131
Cfr9I	CCCGGG	1 cut(s)	235
ClaI	ATCGAT	2 cut(s)	374, 702
CseI	GACGC	2 cut(s)	91, 837
Csp6I	GTAC	4 cut(s)	316, 841, 1219, 1295
CviAII	CATG	8 cut(s)	202, 337, 881, 917, 998, 1193, 1223, 1298
CviQI	GTAC	4 cut(s)	316, 841, 1219, 1295
DdeI	CTNAG	8 cut(s)	35, 576, 582, 600, 1053, 1389, 1402, 1419
DinI	GGCGCC	1 cut(s)	189
DpnI	GATC	8 cut(s)	373, 467, 479, 692, 705, 719, 1101, 1191
DpnII	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
DraI	TTTAAA	1 cut(s)	1305
EaeI	YGGCCR	2 cut(s)	620, 819
Eam1104I	CTCTTC	2 cut(s)	537, 613
EarI	CTCTTC	2 cut(s)	537, 613
Ecl136II	GAGCTC	1 cut(s)	606
Eco130I	CCWWGG	2 cut(s)	801, 1103
Eco24I	GRGCYC	3 cut(s)	608, 818, 969
Eco31I	GGTCTC	3 cut(s)	918, 932, 1056
Eco47I	GGWCC	3 cut(s)	219, 225, 829
Eco53kI	GAGCTC	1 cut(s)	606
Eco81I	CCTNAGG	1 cut(s)	35
Eco88I	CYCGRG	2 cut(s)	235, 810
EcoICRI	GAGCTC	1 cut(s)	606
EcoO109I	RGGNCCY	1 cut(s)	219
EcoRI	GAATTC	2 cut(s)	1079, 1252
EcoRII	CCWGG	1 cut(s)	221
EcoT14I	CCWWGG	2 cut(s)	801, 1103
EcoT38I	GRGCYC	3 cut(s)	608, 818, 969
EgeI	GGCGCC	1 cut(s)	189
EheI	GGCGCC	1 cut(s)	189
ErhI	CCWWGG	2 cut(s)	801, 1103
FaeI	CATG	8 cut(s)	205, 340, 884, 920, 1001, 1196, 1226, 1301
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FatI	CATG	8 cut(s)	201, 336, 880, 916, 997, 1192, 1222, 1297
FauI	CCCGC	3 cut(s)	189, 209, 440
FbaI	TGATCA	1 cut(s)	1189
FblI	GTMKAC	1 cut(s)	80
FokI	GGATG	1 cut(s)	1109
FriOI	GRGCYC	3 cut(s)	608, 818, 969
FspBI	CTAG	4 cut(s)	855, 1071, 1104, 1212
GlaI	GCGC	8 cut(s)	141, 179, 189, 195, 278, 333, 335, 847
GsaI	CCCAGC	3 cut(s)	440, 900, 1314
HaeII	RGCGCY	1 cut(s)	191
HaeIII	GGCC	9 cut(s)	5, 41, 59, 155, 240, 622, 751, 821, 1132
HapII	CCGG	9 cut(s)	191, 236, 241, 259, 354, 360, 481, 1160, 1199
HgaI	GACGC	2 cut(s)	91, 837
HhaI	GCGC	8 cut(s)	142, 180, 190, 196, 279, 334, 336, 848
Hin1I	GRCGYC	3 cut(s)	83, 188, 557
Hin1II	CATG	8 cut(s)	205, 340, 884, 920, 1001, 1196, 1226, 1301
Hin6I	GCGC	8 cut(s)	140, 178, 188, 194, 277, 332, 334, 846
HinP1I	GCGC	8 cut(s)	140, 178, 188, 194, 277, 332, 334, 846
HincII	GTYRAC	3 cut(s)	81, 312, 487
HindII	GTYRAC	3 cut(s)	81, 312, 487
HinfI	GANTC	7 cut(s)	122, 350, 364, 699, 877, 1108, 1288
HpaII	CCGG	9 cut(s)	191, 236, 241, 259, 354, 360, 481, 1160, 1199
HphI	GGTGA	4 cut(s)	55, 131, 679, 790
Hpy166II	GTNNAC	4 cut(s)	81, 312, 487, 832
Hpy188III	TCNNGA	4 cut(s)	781, 855, 1249, 1388
Hpy8I	GTNNAC	4 cut(s)	81, 312, 487, 832
HpyAV	CCTTC	3 cut(s)	1077, 1194, 1275
HpyCH4III	ACNGT	3 cut(s)	67, 119, 1344
HpyCH4IV	ACGT	4 cut(s)	314, 489, 557, 1152
HpyCH4V	TGCA	3 cut(s)	343, 1338, 1382
HpyF3I	CTNAG	8 cut(s)	35, 576, 582, 600, 1053, 1389, 1402, 1419
HpySE526I	ACGT	4 cut(s)	314, 489, 557, 1152
Hsp92I	GRCGYC	3 cut(s)	83, 188, 557
Hsp92II	CATG	8 cut(s)	205, 340, 884, 920, 1001, 1196, 1226, 1301
HspAI	GCGC	8 cut(s)	140, 178, 188, 194, 277, 332, 334, 846
KasI	GGCGCC	1 cut(s)	187
KroI	GCCGGC	1 cut(s)	190
KroNI	GCCGGC	1 cut(s)	192
Ksp22I	TGATCA	1 cut(s)	1189
Kzo9I	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
LguI	GCTCTTC	1 cut(s)	613
LmnI	GCTCC	4 cut(s)	99, 261, 294, 1363
Lsp1109I	GCAGC	5 cut(s)	176, 192, 327, 818, 1359
LweI	GCATC	1 cut(s)	1383
MaeI	CTAG	4 cut(s)	855, 1071, 1104, 1212
MaeII	ACGT	4 cut(s)	314, 489, 557, 1152
MaeIII	GTNAC	3 cut(s)	61, 119, 553
MalI	GATC	8 cut(s)	373, 467, 479, 692, 705, 719, 1101, 1191
MbiI	CCGCTC	1 cut(s)	216
MboI	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
MboII	GAAGA	6 cut(s)	475, 551, 554, 600, 708, 769
MfeI	CAATTG	1 cut(s)	1280
MflI	RGATCY	1 cut(s)	477
MhlI	GDGCHC	4 cut(s)	291, 608, 818, 969
Mly113I	GGCGCC	1 cut(s)	188
MlyI	GAGTC	4 cut(s)	116, 373, 871, 1102
MmeI	TCCRAC	3 cut(s)	432, 479, 735
MreI	CGCCGGCG	1 cut(s)	190
MroNI	GCCGGC	1 cut(s)	190
MseI	TTAA	2 cut(s)	564, 1304
MslI	CAYNNNNRTG	2 cut(s)	665, 1139
MspI	CCGG	9 cut(s)	191, 236, 241, 259, 354, 360, 481, 1160, 1199
MspR9I	CCNGG	7 cut(s)	223, 236, 237, 242, 361, 482, 1200
MunI	CAATTG	1 cut(s)	1280
MvaI	CCWGG	1 cut(s)	223
MvnI	CGCG	8 cut(s)	88, 99, 142, 196, 332, 334, 848, 1117
NaeI	GCCGGC	1 cut(s)	192
NarI	GGCGCC	1 cut(s)	188
NciI	CCSGG	6 cut(s)	236, 237, 242, 361, 482, 1200
NdeII	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
NgoMIV	GCCGGC	1 cut(s)	190
NlaIII	CATG	8 cut(s)	205, 340, 884, 920, 1001, 1196, 1226, 1301
NlaIV	GGNNCC	4 cut(s)	75, 189, 220, 358
NmeAIII	GCCGAG	4 cut(s)	116, 181, 797, 1037
NmuCI	GTSAC	3 cut(s)	61, 119, 553
NspI	RCATGY	2 cut(s)	340, 1001
OliI	CACNNNNGTG	1 cut(s)	665
PaeI	GCATGC	1 cut(s)	340
PauI	GCGCGC	1 cut(s)	332
PciI	ACATGT	1 cut(s)	997
PciSI	GCTCTTC	1 cut(s)	613
PcsI	WCGNNNNNNNCGW	5 cut(s)	18, 57, 108, 111, 458
PdiI	GCCGGC	1 cut(s)	192
PfeI	GAWTC	3 cut(s)	350, 699, 1288
PfoI	TCCNGGA	1 cut(s)	221
Ple19I	CGATCG	1 cut(s)	374
PleI	GAGTC	4 cut(s)	116, 372, 871, 1102
PluTI	GGCGCC	1 cut(s)	191
PpsI	GAGTC	4 cut(s)	116, 372, 871, 1102
PpuMI	RGGWCCY	1 cut(s)	219
PscI	ACATGT	1 cut(s)	997
Psp124BI	GAGCTC	1 cut(s)	608
Psp5II	RGGWCCY	1 cut(s)	219
Psp6I	CCWGG	1 cut(s)	221
PspFI	CCCAGC	3 cut(s)	436, 896, 1310
PspGI	CCWGG	1 cut(s)	221
PspN4I	GGNNCC	4 cut(s)	75, 189, 220, 358
PspPI	GGNCC	8 cut(s)	39, 153, 219, 225, 238, 749, 829, 1131
PspPPI	RGGWCCY	1 cut(s)	219
PstI	CTGCAG	2 cut(s)	345, 1340
PstNI	CAGNNNCTG	1 cut(s)	1372
PsuI	RGATCY	1 cut(s)	477
PteI	GCGCGC	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	374
RsaI	GTAC	4 cut(s)	317, 842, 1220, 1296
RsaNI	GTAC	4 cut(s)	316, 841, 1219, 1295
RseI	CAYNNNNRTG	2 cut(s)	665, 1139
SacI	GAGCTC	1 cut(s)	608
SalI	GTCGAC	1 cut(s)	79
SapI	GCTCTTC	1 cut(s)	613
SaqAI	TTAA	2 cut(s)	564, 1304
Sau3AI	GATC	8 cut(s)	371, 465, 477, 690, 703, 717, 1099, 1189
Sau96I	GGNCC	8 cut(s)	39, 153, 219, 225, 238, 749, 829, 1131
SchI	GAGTC	4 cut(s)	116, 373, 871, 1102
ScrFI	CCNGG	7 cut(s)	223, 236, 237, 242, 361, 482, 1200
SduI	GDGCHC	4 cut(s)	291, 608, 818, 969
SfaNI	GCATC	1 cut(s)	1383
SfcI	CTRYAG	2 cut(s)	341, 1336
SfoI	GGCGCC	1 cut(s)	189
SgrAI	CRCCGGYG	1 cut(s)	190
SgrDI	CGTCGACG	1 cut(s)	79
SinI	GGWCC	3 cut(s)	219, 225, 829
SmaI	CCCGGG	1 cut(s)	237
SmiMI	CAYNNNNRTG	2 cut(s)	665, 1139
SphI	GCATGC	1 cut(s)	340
SspDI	GGCGCC	1 cut(s)	187
SspMI	CTAG	4 cut(s)	855, 1071, 1104, 1212
SstI	GAGCTC	1 cut(s)	608
StyD4I	CCNGG	7 cut(s)	221, 234, 235, 240, 359, 480, 1198
StyI	CCWWGG	2 cut(s)	801, 1103
TaaI	ACNGT	3 cut(s)	67, 119, 1344
TaiI	ACGT	4 cut(s)	317, 492, 560, 1155
TauI	GCSGC	5 cut(s)	17, 20, 88, 571, 713
TfiI	GAWTC	3 cut(s)	350, 699, 1288
Tru1I	TTAA	2 cut(s)	564, 1304
Tru9I	TTAA	2 cut(s)	564, 1304
TscAI	CASTG	2 cut(s)	727, 740
TseFI	GTSAC	3 cut(s)	61, 119, 553
TseI	GCWGC	5 cut(s)	164, 180, 340, 806, 1372
Tsp45I	GTSAC	3 cut(s)	61, 119, 553
TspDTI	ATGAA	1 cut(s)	1157
TspGWI	ACGGA	1 cut(s)	66
TspMI	CCCGGG	1 cut(s)	235
TspRI	CASTG	2 cut(s)	727, 740
VpaK11BI	GGWCC	3 cut(s)	219, 225, 829
XapI	RAATTY	2 cut(s)	1079, 1252
XbaI	TCTAGA	1 cut(s)	854
XceI	RCATGY	2 cut(s)	340, 1001
XmaI	CCCGGG	1 cut(s)	235
XmaJI	CCTAGG	1 cut(s)	1103
XmiI	GTMKAC	1 cut(s)	80
XspI	CTAG	4 cut(s)	855, 1071, 1104, 1212
ZraI	GACGTC	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.