Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0013684

Physical Location & Seq

Genomic Coordinates Reverse (-)

44218701 .. 44224564

Gene Structure 5864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG398800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGCCTCCCACGCCGCCGCCGACGACGACCAAACCCTCAGGGCCGATAATTTCGTCAAGGCCGTCACCGTTAGGGTTCCGTCGACGCCGCGGAAGCTCCGCGACGACGACGACGACGGCGGCGACTCCACTTGTTGCTCGGCGCGGAGTAGTCGGGCTGAGCTGGCCTCCAATTTCAAGCGCAGCGTGGCGCCGGCGCGGGTCATGTTCTACGAGAGCGGGTCGTGGACCAACTTCCCGGGCCGGGTCGTCGAATTGCTCCGGTCGGGTTTCTTTGAGCGCAAGGCGGTGCTCCACTTGGAAATCGAGGGGTCAACGTACCTTTTTGACTTCGCGCGCATGCTGCAGATTGATTCCGGCACCGGGAGTCAGCGATCGATTGCGTGGATTGACGACAACGGGAAATGCTTTTTTCCGAGGCGGTTCGTCAGCGACGAGCTGGGCTGTGGCGGGTCGGATAGTCCGAAGATTGAAATCGAGATCCGGGTCGACGTTTCGGGTCGGAATTCGGGTAAGAGAAAAAGAGAGGATGAGGTAGGAGAAGAAGAGAACGAAGTGACGTCGTTTAAGCGGCAGTCTCAGCCTCAGAGCTCCTCGGAAACTTGGCCGAATGTGAAACTGTTGAGAGAGGGAGAGAGAGCTTACACGGCAGTGAGCAATTTCTTTCTCAAAGGGATTAGAAGAATCGATCCTGCGGCTACGATCAGTGCCATTCGTCAGTGTGTTCGCTCTGGGCCGTTGGATAAGGCTCGCTTGGAGGTCTTTCAGAAGCAAATTGAAATCACCAAGGCAGCTCGGGGCTCGGCCAATGTGGTCCACGCTTGGTACGGCGCGTCGTCTAGAGATATACAGGGGATTTTGACTCATGGGTTTGGCTTGCCCAGCAAGGTTTCTGGGTCTCATGGTGTTGGTCTCTACCTATCTCATTTATCTTTACCTTTTAGTAGTGGGCTCTTACAGCCCGATGATAATGGCGAAAAACATGTTCTTTTGTGCCGAGTTATATTAGGCAATGTTGAGAAAGTTGAGGCAGGGTCTCAGCAATGCTACCCTTCTAGTATGGAATTCGATACTGGTGTGGATGATCCTAGGACTCCTACGCGGTATGTGGTATGGTCCACTAATATGAATAGGCATGTTCTGCCCGAGTGTGTTGTGAGCTATAAACCTTCTGATCATGTGCCGGGTTCTCTGCCTAGAAAGTACCATGTTTCGGAATTGATTTCGAGGGTCAGGAATTCCCTACCCCCTTCAAAAGTTCAGCAATTGTCGAATCTGGTAAATGGTTTAAAGGCTGGGAAGTTAGCAAGAAATGATTTCTGCAGACAGTTTCGATTAGTTGTTGGGGAGCAGTTGCTGCGTTCTGCAATTCCTGAGATGCGTGGCTCGGAACAAGGTTCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0010015 GO:0010101 GO:0010102 GO:0010154 GO:0010228 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST WWE

Protein Analysis

468

Amino Acids

51.81

Weight (kDa)

8.76

Isoelectric Point (pI)

46.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WWE_5	PF23467	59 - 138	4.3e-27	WWE domain
WWE	PF02825	73 - 128	1.4e-06	WWE domain
RST	PF12174	405 - 460	7.9e-11	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013684)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g33460 FvH4_5g33460
malus_domestica	MD08G1211300.v1.1
prunus_persica	Prupe.1G543300_v2.0.a1
pyrus_communis	pycom08g18210 pycom15g35530
rosa_chinensis	RchiOBHm_Chr7g0232191
rosa_laevigata	RLG00000001378
rosa_multiflora	Rmu_co8293403.1_g000001 Rmu_sc0029785.1_g000001
rosa_roxburghii	Rroxscaffold_3G00228680
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7AG424700 Rh7BG398800 Rh7CG445200 Rh7DG416700
rosa_wichuraiana	Rw7G035130 Rw7G035230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	563
AccB1I	GGYRCC	2 cut(s)	190, 359
AccBSI	CCGCTC	1 cut(s)	219
AccI	GTMKAC	2 cut(s)	83, 489
AccII	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
AclWI	GGATC	3 cut(s)	475, 683, 1079
AcoI	YGGCCR	2 cut(s)	605, 804
AcsI	RAATTY	3 cut(s)	505, 1064, 1237
AcyI	GRCGYC	3 cut(s)	86, 191, 560
AfaI	GTAC	3 cut(s)	320, 827, 1205
AfiI	CCNNNNNNNGG	3 cut(s)	244, 363, 1213
AflIII	ACRYGT	1 cut(s)	982
AgsI	TTSAA	4 cut(s)	178, 473, 779, 1254
AleI	CACNNNNGTG	1 cut(s)	650
AluBI	AGCT	7 cut(s)	97, 163, 439, 591, 641, 794, 1161
AluI	AGCT	7 cut(s)	97, 163, 439, 591, 641, 794, 1161
Alw21I	GWGCWC	2 cut(s)	294, 593
Alw26I	GTCTC	4 cut(s)	582, 903, 917, 1041
AlwI	GGATC	3 cut(s)	475, 683, 1079
AlwNI	CAGNNNCTG	1 cut(s)	1357
Ama87I	CYCGRG	3 cut(s)	238, 795, 1145
AoxI	GGCC	8 cut(s)	3, 42, 60, 165, 241, 605, 734, 804
ApeKI	GCWGC	4 cut(s)	183, 343, 791, 1357
ApoI	RAATTY	3 cut(s)	505, 1064, 1237
AspA2I	CCTAGG	1 cut(s)	1088
AspLEI	GCGC	8 cut(s)	145, 183, 193, 199, 282, 337, 339, 833
AspS9I	GGNCC	6 cut(s)	42, 228, 241, 734, 814, 1116
AsuC2I	CCSGG	6 cut(s)	239, 240, 245, 364, 485, 1185
AsuHPI	GGTGA	2 cut(s)	58, 775
AvaI	CYCGRG	3 cut(s)	238, 795, 1145
AvaII	GGWCC	3 cut(s)	228, 814, 1116
AvrII	CCTAGG	1 cut(s)	1088
AxyI	CCTNAGG	1 cut(s)	38
BaeI	ACNNNNGTAYC	2 cut(s)	1062, 1095
BanI	GGYRCC	2 cut(s)	190, 359
BanII	GRGCYC	3 cut(s)	593, 803, 954
Bbv12I	GWGCWC	2 cut(s)	294, 593
BbvI	GCAGC	4 cut(s)	195, 330, 803, 1344
BceAI	ACGGC	5 cut(s)	47, 133, 663, 721, 844
BclI	TGATCA	1 cut(s)	1174
BcnI	CCSGG	6 cut(s)	239, 240, 245, 364, 485, 1185
BcoDI	GTCTC	4 cut(s)	582, 903, 917, 1041
BfaI	CTAG	4 cut(s)	840, 1056, 1089, 1197
BfmI	CTRYAG	2 cut(s)	344, 1321
BfoI	RGCGCY	1 cut(s)	194
BlnI	CCTAGG	1 cut(s)	1088
BlpI	GCTNAGC	1 cut(s)	159
Bme1390I	CCNGG	6 cut(s)	239, 240, 245, 364, 485, 1185
Bme18I	GGWCC	3 cut(s)	228, 814, 1116
BmeT110I	CYCGRG	3 cut(s)	238, 795, 1145
BmgT120I	GGNCC	6 cut(s)	42, 228, 241, 734, 814, 1116
BmiI	GGNNCC	3 cut(s)	78, 192, 361
BmrFI	CCNGG	6 cut(s)	239, 240, 245, 364, 485, 1185
BmsI	GCATC	1 cut(s)	1368
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
Bpu1102I	GCTNAGC	1 cut(s)	159
BpuMI	CCSGG	6 cut(s)	239, 240, 245, 364, 485, 1185
Bsa29I	ATCGAT	2 cut(s)	377, 687
BsaBI	GATNNNNATC	1 cut(s)	473
BsaHI	GRCGYC	3 cut(s)	86, 191, 560
BsaI	GGTCTC	3 cut(s)	903, 917, 1041
BsaJI	CCNNGG	6 cut(s)	89, 238, 416, 594, 786, 1088
BsaWI	WCCGGW	1 cut(s)	261
Bsc4I	CCNNNNNNNGG	3 cut(s)	244, 363, 1213
Bse118I	RCCGGY	1 cut(s)	193
Bse1I	ACTGG	1 cut(s)	1078
Bse21I	CCTNAGG	1 cut(s)	38
Bse3DI	GCAATG	2 cut(s)	1018, 1049
Bse8I	GATNNNNATC	1 cut(s)	473
BseCI	ATCGAT	2 cut(s)	377, 687
BseDI	CCNNGG	6 cut(s)	89, 238, 416, 594, 786, 1088
BseGI	GGATG	2 cut(s)	535, 1087
BseJI	GATNNNNATC	1 cut(s)	473
BseLI	CCNNNNNNNGG	3 cut(s)	244, 363, 1213
BseMI	GCAATG	2 cut(s)	1018, 1049
BseMII	CTCAG	6 cut(s)	52, 150, 593, 599, 1052, 1365
BseNI	ACTGG	1 cut(s)	1078
BsePI	GCGCGC	1 cut(s)	335
BseRI	GAGGAG	1 cut(s)	583
BseXI	GCAGC	4 cut(s)	195, 330, 803, 1344
BseYI	CCCAGC	3 cut(s)	439, 881, 1295
Bsh1236I	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
Bsh1285I	CGRYCG	2 cut(s)	266, 377
BshFI	GGCC	8 cut(s)	5, 44, 62, 167, 243, 607, 736, 806
BshNI	GGYRCC	2 cut(s)	190, 359
BshVI	ATCGAT	2 cut(s)	377, 687
BsiEI	CGRYCG	2 cut(s)	266, 377
BsiHKAI	GWGCWC	2 cut(s)	294, 593
BsiHKCI	CYCGRG	3 cut(s)	238, 795, 1145
BsiSI	CCGG	8 cut(s)	194, 239, 244, 262, 357, 363, 484, 1184
BslI	CCNNNNNNNGG	3 cut(s)	244, 363, 1213
BsmAI	GTCTC	4 cut(s)	582, 903, 917, 1041
BsnI	GGCC	8 cut(s)	5, 44, 62, 167, 243, 607, 736, 806
Bso31I	GGTCTC	3 cut(s)	903, 917, 1041
BsoBI	CYCGRG	3 cut(s)	238, 795, 1145
Bsp1286I	GDGCHC	4 cut(s)	294, 593, 803, 954
Bsp143I	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
Bsp1720I	GCTNAGC	1 cut(s)	159
BspANI	GGCC	8 cut(s)	5, 44, 62, 167, 243, 607, 736, 806
BspCNI	CTCAG	6 cut(s)	51, 151, 592, 598, 1051, 1366
BspDI	ATCGAT	2 cut(s)	377, 687
BspFNI	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
BspLI	GGNNCC	3 cut(s)	78, 192, 361
BspMAI	CTGCAG	2 cut(s)	348, 1325
BspPI	GGATC	3 cut(s)	475, 683, 1079
BspT107I	GGYRCC	2 cut(s)	190, 359
BspTNI	GGTCTC	3 cut(s)	903, 917, 1041
BsrBI	CCGCTC	1 cut(s)	219
BsrDI	GCAATG	2 cut(s)	1018, 1049
BsrFI	RCCGGY	1 cut(s)	193
BsrI	ACTGG	1 cut(s)	1078
BssAI	RCCGGY	1 cut(s)	193
BssECI	CCNNGG	6 cut(s)	89, 238, 416, 594, 786, 1088
BssHII	GCGCGC	1 cut(s)	335
BssMI	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
BssNI	GRCGYC	3 cut(s)	86, 191, 560
BssT1I	CCWWGG	2 cut(s)	786, 1088
Bst4CI	ACNGT	3 cut(s)	70, 621, 1329
Bst6I	CTCTTC	1 cut(s)	540
BstACI	GRCGYC	3 cut(s)	86, 191, 560
BstAPI	GCANNNNNTGC	2 cut(s)	1141, 1357
BstC8I	GCNNGC	6 cut(s)	165, 195, 337, 341, 751, 878
BstDEI	CTNAG	7 cut(s)	38, 159, 579, 585, 1038, 1374, 1404
BstDSI	CCRYGG	1 cut(s)	89
BstF5I	GGATG	2 cut(s)	535, 1087
BstFNI	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
BstH2I	RGCGCY	1 cut(s)	194
BstHHI	GCGC	8 cut(s)	145, 183, 193, 199, 282, 337, 339, 833
BstKTI	GATC	6 cut(s)	377, 483, 691, 705, 1087, 1177
BstMAI	GTCTC	4 cut(s)	582, 903, 917, 1041
BstMBI	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
BstMCI	CGRYCG	2 cut(s)	266, 377
BstNSI	RCATGY	3 cut(s)	343, 986, 1139
BstSCI	CCNGG	6 cut(s)	237, 238, 243, 362, 483, 1183
BstSFI	CTRYAG	2 cut(s)	344, 1321
BstUI	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
BstV1I	GCAGC	4 cut(s)	195, 330, 803, 1344
BstX2I	RGATCY	1 cut(s)	480
BstYI	RGATCY	1 cut(s)	480
Bsu15I	ATCGAT	2 cut(s)	377, 687
Bsu36I	CCTNAGG	1 cut(s)	38
BsuRI	GGCC	8 cut(s)	5, 44, 62, 167, 243, 607, 736, 806
BsuTUI	ATCGAT	2 cut(s)	377, 687
BtgI	CCRYGG	1 cut(s)	89
BtsCI	GGATG	2 cut(s)	535, 1087
BtsI	GCAGTG	1 cut(s)	657
BtsIMutI	CAGTG	3 cut(s)	657, 712, 725
Cac8I	GCNNGC	6 cut(s)	165, 195, 337, 341, 751, 878
CaiI	CAGNNNCTG	1 cut(s)	1357
CfoI	GCGC	8 cut(s)	145, 183, 193, 199, 282, 337, 339, 833
Cfr10I	RCCGGY	1 cut(s)	193
Cfr13I	GGNCC	6 cut(s)	42, 228, 241, 734, 814, 1116
Cfr42I	CCGCGG	1 cut(s)	92
Cfr9I	CCCGGG	1 cut(s)	238
ClaI	ATCGAT	2 cut(s)	377, 687
CseI	GACGC	2 cut(s)	94, 822
Csp6I	GTAC	3 cut(s)	319, 826, 1204
CviAII	CATG	8 cut(s)	205, 340, 866, 902, 983, 1136, 1178, 1208
CviQI	GTAC	3 cut(s)	319, 826, 1204
DdeI	CTNAG	7 cut(s)	38, 159, 579, 585, 1038, 1374, 1404
DinI	GGCGCC	1 cut(s)	192
DpnI	GATC	6 cut(s)	376, 482, 690, 704, 1086, 1176
DpnII	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
DraI	TTTAAA	1 cut(s)	1290
EaeI	YGGCCR	2 cut(s)	605, 804
Eam1104I	CTCTTC	1 cut(s)	540
EarI	CTCTTC	1 cut(s)	540
Ecl136II	GAGCTC	1 cut(s)	591
Eco130I	CCWWGG	2 cut(s)	786, 1088
Eco24I	GRGCYC	3 cut(s)	593, 803, 954
Eco31I	GGTCTC	3 cut(s)	903, 917, 1041
Eco47I	GGWCC	3 cut(s)	228, 814, 1116
Eco53kI	GAGCTC	1 cut(s)	591
Eco81I	CCTNAGG	1 cut(s)	38
Eco88I	CYCGRG	3 cut(s)	238, 795, 1145
EcoICRI	GAGCTC	1 cut(s)	591
EcoRI	GAATTC	3 cut(s)	505, 1064, 1237
EcoT14I	CCWWGG	2 cut(s)	786, 1088
EcoT38I	GRGCYC	3 cut(s)	593, 803, 954
EgeI	GGCGCC	1 cut(s)	192
EheI	GGCGCC	1 cut(s)	192
ErhI	CCWWGG	2 cut(s)	786, 1088
FaeI	CATG	8 cut(s)	208, 343, 869, 905, 986, 1139, 1181, 1211
FalI	AAGNNNNNCTT	2 cut(s)	737, 769
FatI	CATG	8 cut(s)	204, 339, 865, 901, 982, 1135, 1177, 1207
FauI	CCCGC	3 cut(s)	192, 212, 443
FbaI	TGATCA	1 cut(s)	1174
FblI	GTMKAC	2 cut(s)	83, 489
FokI	GGATG	2 cut(s)	542, 1094
FriOI	GRGCYC	3 cut(s)	593, 803, 954
FspBI	CTAG	4 cut(s)	840, 1056, 1089, 1197
GlaI	GCGC	8 cut(s)	144, 182, 192, 198, 281, 336, 338, 832
GsaI	CCCAGC	3 cut(s)	443, 885, 1299
HaeII	RGCGCY	1 cut(s)	194
HaeIII	GGCC	8 cut(s)	5, 44, 62, 167, 243, 607, 736, 806
HapII	CCGG	8 cut(s)	194, 239, 244, 262, 357, 363, 484, 1184
HgaI	GACGC	2 cut(s)	94, 822
HhaI	GCGC	8 cut(s)	145, 183, 193, 199, 282, 337, 339, 833
Hin1I	GRCGYC	3 cut(s)	86, 191, 560
Hin1II	CATG	8 cut(s)	208, 343, 869, 905, 986, 1139, 1181, 1211
Hin6I	GCGC	8 cut(s)	143, 181, 191, 197, 280, 335, 337, 831
HinP1I	GCGC	8 cut(s)	143, 181, 191, 197, 280, 335, 337, 831
HincII	GTYRAC	3 cut(s)	84, 315, 490
HindII	GTYRAC	3 cut(s)	84, 315, 490
HinfI	GANTC	7 cut(s)	125, 353, 367, 684, 862, 1093, 1273
HpaII	CCGG	8 cut(s)	194, 239, 244, 262, 357, 363, 484, 1184
HphI	GGTGA	2 cut(s)	58, 775
Hpy166II	GTNNAC	6 cut(s)	84, 228, 315, 490, 817, 1119
Hpy188III	TCNNGA	4 cut(s)	478, 840, 1234, 1373
Hpy8I	GTNNAC	6 cut(s)	84, 228, 315, 490, 817, 1119
HpyAV	CCTTC	3 cut(s)	1062, 1179, 1260
HpyCH4III	ACNGT	3 cut(s)	70, 621, 1329
HpyCH4IV	ACGT	3 cut(s)	317, 492, 560
HpyCH4V	TGCA	3 cut(s)	346, 1323, 1367
HpyF3I	CTNAG	7 cut(s)	38, 159, 579, 585, 1038, 1374, 1404
HpySE526I	ACGT	3 cut(s)	317, 492, 560
Hsp92I	GRCGYC	3 cut(s)	86, 191, 560
Hsp92II	CATG	8 cut(s)	208, 343, 869, 905, 986, 1139, 1181, 1211
HspAI	GCGC	8 cut(s)	143, 181, 191, 197, 280, 335, 337, 831
KasI	GGCGCC	1 cut(s)	190
KroI	GCCGGC	1 cut(s)	193
KroNI	GCCGGC	1 cut(s)	195
Ksp22I	TGATCA	1 cut(s)	1174
KspI	CCGCGG	1 cut(s)	92
Kzo9I	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
LmnI	GCTCC	5 cut(s)	102, 264, 297, 596, 1348
Lsp1109I	GCAGC	4 cut(s)	195, 330, 803, 1344
LweI	GCATC	1 cut(s)	1368
MaeI	CTAG	4 cut(s)	840, 1056, 1089, 1197
MaeII	ACGT	3 cut(s)	317, 492, 560
MaeIII	GTNAC	2 cut(s)	64, 556
MalI	GATC	6 cut(s)	376, 482, 690, 704, 1086, 1176
MbiI	CCGCTC	1 cut(s)	219
MboI	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
MboII	GAAGA	4 cut(s)	478, 554, 557, 693
MfeI	CAATTG	1 cut(s)	1265
MflI	RGATCY	1 cut(s)	480
MhlI	GDGCHC	4 cut(s)	294, 593, 803, 954
Mly113I	GGCGCC	1 cut(s)	191
MlyI	GAGTC	4 cut(s)	119, 376, 856, 1087
MmeI	TCCRAC	3 cut(s)	435, 482, 720
MreI	CGCCGGCG	1 cut(s)	193
MroNI	GCCGGC	1 cut(s)	193
MseI	TTAA	2 cut(s)	567, 1289
MslI	CAYNNNNRTG	2 cut(s)	650, 1124
MspA1I	CMGCKG	1 cut(s)	91
MspI	CCGG	8 cut(s)	194, 239, 244, 262, 357, 363, 484, 1184
MspR9I	CCNGG	6 cut(s)	239, 240, 245, 364, 485, 1185
MunI	CAATTG	1 cut(s)	1265
MvnI	CGCG	8 cut(s)	91, 102, 145, 199, 335, 337, 833, 1102
NaeI	GCCGGC	1 cut(s)	195
NarI	GGCGCC	1 cut(s)	191
NciI	CCSGG	6 cut(s)	239, 240, 245, 364, 485, 1185
NdeII	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
NgoMIV	GCCGGC	1 cut(s)	193
NlaIII	CATG	8 cut(s)	208, 343, 869, 905, 986, 1139, 1181, 1211
NlaIV	GGNNCC	3 cut(s)	78, 192, 361
NmeAIII	GCCGAG	3 cut(s)	119, 782, 1022
NmuCI	GTSAC	2 cut(s)	64, 556
NspI	RCATGY	3 cut(s)	343, 986, 1139
OliI	CACNNNNGTG	1 cut(s)	650
PaeI	GCATGC	1 cut(s)	343
PauI	GCGCGC	1 cut(s)	335
PciI	ACATGT	1 cut(s)	982
PcsI	WCGNNNNNNNCGW	6 cut(s)	18, 60, 111, 120, 432, 461
PdiI	GCCGGC	1 cut(s)	195
PfeI	GAWTC	3 cut(s)	353, 684, 1273
Ple19I	CGATCG	1 cut(s)	377
PleI	GAGTC	4 cut(s)	119, 375, 856, 1087
PluTI	GGCGCC	1 cut(s)	194
PpsI	GAGTC	4 cut(s)	119, 375, 856, 1087
PscI	ACATGT	1 cut(s)	982
Psp124BI	GAGCTC	1 cut(s)	593
PspFI	CCCAGC	3 cut(s)	439, 881, 1295
PspN4I	GGNNCC	3 cut(s)	78, 192, 361
PspPI	GGNCC	6 cut(s)	42, 228, 241, 734, 814, 1116
PstI	CTGCAG	2 cut(s)	348, 1325
PstNI	CAGNNNCTG	1 cut(s)	1357
PsuI	RGATCY	1 cut(s)	480
PteI	GCGCGC	1 cut(s)	335
PvuI	CGATCG	1 cut(s)	377
RsaI	GTAC	3 cut(s)	320, 827, 1205
RsaNI	GTAC	3 cut(s)	319, 826, 1204
RseI	CAYNNNNRTG	2 cut(s)	650, 1124
SacI	GAGCTC	1 cut(s)	593
SacII	CCGCGG	1 cut(s)	92
SalI	GTCGAC	2 cut(s)	82, 488
SaqAI	TTAA	2 cut(s)	567, 1289
Sau3AI	GATC	6 cut(s)	374, 480, 688, 702, 1084, 1174
Sau96I	GGNCC	6 cut(s)	42, 228, 241, 734, 814, 1116
SchI	GAGTC	4 cut(s)	119, 376, 856, 1087
ScrFI	CCNGG	6 cut(s)	239, 240, 245, 364, 485, 1185
SduI	GDGCHC	4 cut(s)	294, 593, 803, 954
SfaNI	GCATC	1 cut(s)	1368
SfcI	CTRYAG	2 cut(s)	344, 1321
SfoI	GGCGCC	1 cut(s)	192
Sfr303I	CCGCGG	1 cut(s)	92
SgrAI	CRCCGGYG	1 cut(s)	193
SgrBI	CCGCGG	1 cut(s)	92
SgrDI	CGTCGACG	1 cut(s)	82
SinI	GGWCC	3 cut(s)	228, 814, 1116
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	2 cut(s)	650, 1124
SphI	GCATGC	1 cut(s)	343
SspDI	GGCGCC	1 cut(s)	190
SspMI	CTAG	4 cut(s)	840, 1056, 1089, 1197
SstI	GAGCTC	1 cut(s)	593
StyD4I	CCNGG	6 cut(s)	237, 238, 243, 362, 483, 1183
StyI	CCWWGG	2 cut(s)	786, 1088
TaaI	ACNGT	3 cut(s)	70, 621, 1329
TaiI	ACGT	3 cut(s)	320, 495, 563
TauI	GCSGC	6 cut(s)	17, 20, 91, 123, 574, 698
TfiI	GAWTC	3 cut(s)	353, 684, 1273
Tru1I	TTAA	2 cut(s)	567, 1289
Tru9I	TTAA	2 cut(s)	567, 1289
TscAI	CASTG	3 cut(s)	657, 712, 725
TseFI	GTSAC	2 cut(s)	64, 556
TseI	GCWGC	4 cut(s)	183, 343, 791, 1357
Tsp45I	GTSAC	2 cut(s)	64, 556
TspDTI	ATGAA	1 cut(s)	1142
TspGWI	ACGGA	1 cut(s)	69
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	3 cut(s)	657, 712, 725
VpaK11BI	GGWCC	3 cut(s)	228, 814, 1116
XapI	RAATTY	3 cut(s)	505, 1064, 1237
XbaI	TCTAGA	1 cut(s)	839
XceI	RCATGY	3 cut(s)	343, 986, 1139
XmaI	CCCGGG	1 cut(s)	238
XmaJI	CCTAGG	1 cut(s)	1088
XmiI	GTMKAC	2 cut(s)	83, 489
XspI	CTAG	4 cut(s)	840, 1056, 1089, 1197
ZraI	GACGTC	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.