Rmu_co8293403.1_g000001
NAC Family

inactive poly ADP-ribose polymerase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8293403.1
Physical Location & Seq
Forward (+)
1 .. 836
836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8293403.1_g000001.1.cds

Sequence Viewer

Length: 836 bp
cttgttgctcggcgcggagtagtcgggccgagctggccgccaatttcaagcgcagcgtggcgccggcgcgggtcatgttctacgagagcgggtcctggaccaacttcccgggccgggtcgtcgaattgctccggtcgggtttctttgagcgcaaggcggtgctccacttggaaatcgaggggtcaacgtacctgtttgacttcgcgcgcatgctgcagattgattccggcaccgggagtcagcgatcgattgcgtggattgacgacaacgggagatgcttttttccgaggcggttcgtcagcgacgagctgggctgtggcgagtcggatagtccgaagatcgaaattgagatccgggtcgacgtttcgggtcggagttcgggtaagagaaagagagatgatgaggtaggagaagaagagaacgaagtgacgtcgtttaagcggcaggctcagcctcagacaaatccaaagcctcagagctcttcggaaacttggccgaatgtgaaattgttgagagagggagagagagcttacacggcggtgagcaatttctttctcaaagggatcagaagaatcgatcctgcggctacgatcagtgccattcgtcagtgtgttcgctctgggccgttggataaggctcgcttggaggtttttcagaagcaaattgaaatcaccaaggcagctcggggttcggccaatgtggtccacgcttggtacggcgcgtcgtctagagatatacagggtattttgactcatgggtttggcttgcccagcaaggtttctgggtctcatggtgttggtctctacctatctcatttatctttaccttttaggtaa

Protein Analysis

277

Amino Acids

30.84

Weight (kDa)

9.37

Isoelectric Point (pI)

52.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013684)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 433
AccB1I GGYRCC 2 cut(s) 60, 229
AccBSI CCGCTC 1 cut(s) 89
AccI GTMKAC 1 cut(s) 359
AccII CGCG 5 cut(s) 15, 69, 205, 207, 721
AciI CCGC 9 cut(s) 15, 38, 69, 89, 157, 291, 441, 538, 583
AclWI GGATC 3 cut(s) 345, 571, 571
AcoI YGGCCR 3 cut(s) 35, 493, 692
AcyI GRCGYC 2 cut(s) 61, 430
AfaI GTAC 2 cut(s) 190, 715
AfiI CCNNNNNNNGG 2 cut(s) 114, 233
AgsI TTSAA 2 cut(s) 48, 667
AjnI CCWGG 1 cut(s) 94
AleI CACNNNNGTG 1 cut(s) 538
AluBI AGCT 5 cut(s) 33, 309, 479, 529, 682
AluI AGCT 5 cut(s) 33, 309, 479, 529, 682
Alw21I GWGCWC 2 cut(s) 164, 481
Alw26I GTCTC 2 cut(s) 791, 805
AlwI GGATC 3 cut(s) 345, 571, 571
Ama87I CYCGRG 2 cut(s) 108, 683
AoxI GGCC 6 cut(s) 26, 35, 111, 493, 622, 692
ApeKI GCWGC 3 cut(s) 53, 213, 679
AspLEI GCGC 8 cut(s) 15, 53, 63, 69, 152, 207, 209, 721
AspS9I GGNCC 6 cut(s) 26, 92, 98, 111, 622, 702
AsuC2I CCSGG 5 cut(s) 109, 110, 115, 234, 355
AsuHPI GGTGA 2 cut(s) 552, 663
AvaI CYCGRG 2 cut(s) 108, 683
AvaII GGWCC 3 cut(s) 92, 98, 702
BanI GGYRCC 2 cut(s) 60, 229
BanII GRGCYC 1 cut(s) 481
Bbv12I GWGCWC 2 cut(s) 164, 481
BbvI GCAGC 3 cut(s) 65, 200, 691
BceAI ACGGC 3 cut(s) 551, 609, 732
BciT130I CCWGG 1 cut(s) 96
BcnI CCSGG 5 cut(s) 109, 110, 115, 234, 355
BcoDI GTCTC 2 cut(s) 791, 805
BfaI CTAG 1 cut(s) 728
BfmI CTRYAG 1 cut(s) 214
BfoI RGCGCY 1 cut(s) 64
BglI GCCNNNNNGGC 1 cut(s) 34
BisI GCNGC 6 cut(s) 38, 54, 214, 442, 584, 680
BlpI GCTNAGC 1 cut(s) 449
BlsI GCNGC 6 cut(s) 39, 55, 215, 443, 585, 681
Bme1390I CCNGG 6 cut(s) 96, 109, 110, 115, 234, 355
Bme18I GGWCC 3 cut(s) 92, 98, 702
BmeT110I CYCGRG 2 cut(s) 108, 683
BmgT120I GGNCC 6 cut(s) 26, 92, 98, 111, 622, 702
BmiI GGNNCC 3 cut(s) 62, 93, 231
BmrFI CCNGG 6 cut(s) 96, 109, 110, 115, 234, 355
BmsI GCATC 1 cut(s) 265
Bpu1102I GCTNAGC 1 cut(s) 449
BpuMI CCSGG 5 cut(s) 109, 110, 115, 234, 355
Bsa29I ATCGAT 2 cut(s) 247, 575
BsaHI GRCGYC 2 cut(s) 61, 430
BsaI GGTCTC 2 cut(s) 791, 805
BsaJI CCNNGG 3 cut(s) 108, 286, 674
BsaWI WCCGGW 1 cut(s) 131
BsaXI ACNNNNNCTCC 2 cut(s) 366, 396
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 233
Bse118I RCCGGY 1 cut(s) 63
BseBI CCWGG 1 cut(s) 96
BseCI ATCGAT 2 cut(s) 247, 575
BseDI CCNNGG 3 cut(s) 108, 286, 674
BseLI CCNNNNNNNGG 2 cut(s) 114, 233
BseMII CTCAG 3 cut(s) 463, 469, 487
BsePI GCGCGC 1 cut(s) 205
BseXI GCAGC 3 cut(s) 65, 200, 691
BseYI CCCAGC 2 cut(s) 309, 769
Bsh1236I CGCG 5 cut(s) 15, 69, 205, 207, 721
Bsh1285I CGRYCG 2 cut(s) 136, 247
BshFI GGCC 6 cut(s) 28, 37, 113, 495, 624, 694
BshNI GGYRCC 2 cut(s) 60, 229
BshVI ATCGAT 2 cut(s) 247, 575
BsiEI CGRYCG 2 cut(s) 136, 247
BsiHKAI GWGCWC 2 cut(s) 164, 481
BsiHKCI CYCGRG 2 cut(s) 108, 683
BsiSI CCGG 7 cut(s) 64, 109, 114, 132, 227, 233, 354
BslI CCNNNNNNNGG 2 cut(s) 114, 233
BsmAI GTCTC 2 cut(s) 791, 805
BsnI GGCC 6 cut(s) 28, 37, 113, 495, 624, 694
Bso31I GGTCTC 2 cut(s) 791, 805
BsoBI CYCGRG 2 cut(s) 108, 683
Bsp1286I GDGCHC 2 cut(s) 164, 481
Bsp143I GATC 6 cut(s) 244, 338, 350, 563, 576, 590
Bsp1720I GCTNAGC 1 cut(s) 449
BspACI CCGC 9 cut(s) 15, 38, 69, 89, 157, 291, 441, 538, 583
BspANI GGCC 6 cut(s) 28, 37, 113, 495, 624, 694
BspCNI CTCAG 3 cut(s) 462, 468, 486
BspDI ATCGAT 2 cut(s) 247, 575
BspFNI CGCG 5 cut(s) 15, 69, 205, 207, 721
BspLI GGNNCC 3 cut(s) 62, 93, 231
BspMAI CTGCAG 1 cut(s) 218
BspPI GGATC 3 cut(s) 345, 571, 571
BspQI GCTCTTC 1 cut(s) 486
BspT107I GGYRCC 2 cut(s) 60, 229
BspTNI GGTCTC 2 cut(s) 791, 805
BsrBI CCGCTC 1 cut(s) 89
BsrFI RCCGGY 1 cut(s) 63
BssAI RCCGGY 1 cut(s) 63
BssECI CCNNGG 3 cut(s) 108, 286, 674
BssHII GCGCGC 1 cut(s) 205
BssMI GATC 6 cut(s) 244, 338, 350, 563, 576, 590
BssNI GRCGYC 2 cut(s) 61, 430
BssT1I CCWWGG 1 cut(s) 674
Bst2UI CCWGG 1 cut(s) 96
Bst6I CTCTTC 2 cut(s) 410, 486
BstACI GRCGYC 2 cut(s) 61, 430
BstC8I GCNNGC 7 cut(s) 35, 65, 207, 211, 446, 639, 766
BstDEI CTNAG 3 cut(s) 449, 455, 473
BstFNI CGCG 5 cut(s) 15, 69, 205, 207, 721
BstH2I RGCGCY 1 cut(s) 64
BstHHI GCGC 8 cut(s) 15, 53, 63, 69, 152, 207, 209, 721
BstKTI GATC 6 cut(s) 247, 341, 353, 566, 579, 593
BstMAI GTCTC 2 cut(s) 791, 805
BstMBI GATC 6 cut(s) 244, 338, 350, 563, 576, 590
BstMCI CGRYCG 2 cut(s) 136, 247
BstMWI GCNNNNNNNGC 5 cut(s) 34, 213, 450, 535, 770
BstNI CCWGG 1 cut(s) 96
BstNSI RCATGY 1 cut(s) 213
BstSCI CCNGG 6 cut(s) 94, 107, 108, 113, 232, 353
BstSFI CTRYAG 1 cut(s) 214
BstUI CGCG 5 cut(s) 15, 69, 205, 207, 721
BstV1I GCAGC 3 cut(s) 65, 200, 691
BstX2I RGATCY 1 cut(s) 350
BstYI RGATCY 1 cut(s) 350
Bsu15I ATCGAT 2 cut(s) 247, 575
BsuRI GGCC 6 cut(s) 28, 37, 113, 495, 624, 694
BsuTUI ATCGAT 2 cut(s) 247, 575
BtsIMutI CAGTG 2 cut(s) 600, 613
Cac8I GCNNGC 7 cut(s) 35, 65, 207, 211, 446, 639, 766
CfoI GCGC 8 cut(s) 15, 53, 63, 69, 152, 207, 209, 721
Cfr10I RCCGGY 1 cut(s) 63
Cfr13I GGNCC 6 cut(s) 26, 92, 98, 111, 622, 702
Cfr9I CCCGGG 1 cut(s) 108
ClaI ATCGAT 2 cut(s) 247, 575
CseI GACGC 1 cut(s) 710
Csp6I GTAC 2 cut(s) 189, 714
CviAII CATG 4 cut(s) 75, 210, 754, 790
CviQI GTAC 2 cut(s) 189, 714
DdeI CTNAG 3 cut(s) 449, 455, 473
DinI GGCGCC 1 cut(s) 62
DpnI GATC 6 cut(s) 246, 340, 352, 565, 578, 592
DpnII GATC 6 cut(s) 244, 338, 350, 563, 576, 590
EaeI YGGCCR 3 cut(s) 35, 493, 692
Eam1104I CTCTTC 2 cut(s) 410, 486
EarI CTCTTC 2 cut(s) 410, 486
Ecl136II GAGCTC 1 cut(s) 479
Eco130I CCWWGG 1 cut(s) 674
Eco24I GRGCYC 1 cut(s) 481
Eco31I GGTCTC 2 cut(s) 791, 805
Eco47I GGWCC 3 cut(s) 92, 98, 702
Eco53kI GAGCTC 1 cut(s) 479
Eco88I CYCGRG 2 cut(s) 108, 683
EcoICRI GAGCTC 1 cut(s) 479
EcoO109I RGGNCCY 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 94
EcoT14I CCWWGG 1 cut(s) 674
EcoT38I GRGCYC 1 cut(s) 481
EgeI GGCGCC 1 cut(s) 62
EheI GGCGCC 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 674
FaeI CATG 4 cut(s) 78, 213, 757, 793
FaiI YATR 5 cut(s) 76, 211, 736, 755, 791
FalI AAGNNNNNCTT 2 cut(s) 625, 657
FatI CATG 4 cut(s) 74, 209, 753, 789
FauI CCCGC 2 cut(s) 62, 82
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 6 cut(s) 38, 54, 214, 442, 584, 680
FriOI GRGCYC 1 cut(s) 481
Fsp4HI GCNGC 6 cut(s) 38, 54, 214, 442, 584, 680
FspBI CTAG 1 cut(s) 728
GlaI GCGC 8 cut(s) 14, 52, 62, 68, 151, 206, 208, 720
GluI GCNGC 6 cut(s) 38, 54, 214, 442, 584, 680
GsaI CCCAGC 2 cut(s) 313, 773
HaeII RGCGCY 1 cut(s) 64
HaeIII GGCC 6 cut(s) 28, 37, 113, 495, 624, 694
HapII CCGG 7 cut(s) 64, 109, 114, 132, 227, 233, 354
HgaI GACGC 1 cut(s) 710
HhaI GCGC 8 cut(s) 15, 53, 63, 69, 152, 207, 209, 721
Hin1I GRCGYC 2 cut(s) 61, 430
Hin1II CATG 4 cut(s) 78, 213, 757, 793
Hin6I GCGC 8 cut(s) 13, 51, 61, 67, 150, 205, 207, 719
HinP1I GCGC 8 cut(s) 13, 51, 61, 67, 150, 205, 207, 719
HincII GTYRAC 2 cut(s) 185, 360
HindII GTYRAC 2 cut(s) 185, 360
HinfI GANTC 5 cut(s) 223, 237, 322, 572, 750
HpaII CCGG 7 cut(s) 64, 109, 114, 132, 227, 233, 354
HphI GGTGA 2 cut(s) 552, 663
Hpy166II GTNNAC 3 cut(s) 185, 360, 705
Hpy188I TCNGA 9 cut(s) 287, 327, 335, 374, 458, 476, 486, 568, 656
Hpy188III TCNNGA 1 cut(s) 728
Hpy8I GTNNAC 3 cut(s) 185, 360, 705
Hpy99I CGWCG 5 cut(s) 124, 307, 364, 435, 726
HpyCH4IV ACGT 3 cut(s) 187, 362, 430
HpyCH4V TGCA 1 cut(s) 216
HpyF10VI GCNNNNNNNGC 5 cut(s) 34, 213, 450, 535, 770
HpyF3I CTNAG 3 cut(s) 449, 455, 473
HpySE526I ACGT 3 cut(s) 187, 362, 430
Hsp92I GRCGYC 2 cut(s) 61, 430
Hsp92II CATG 4 cut(s) 78, 213, 757, 793
HspAI GCGC 8 cut(s) 13, 51, 61, 67, 150, 205, 207, 719
KasI GGCGCC 1 cut(s) 60
KroI GCCGGC 1 cut(s) 63
KroNI GCCGGC 1 cut(s) 65
Kzo9I GATC 6 cut(s) 244, 338, 350, 563, 576, 590
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 2 cut(s) 134, 167
Lsp1109I GCAGC 3 cut(s) 65, 200, 691
LweI GCATC 1 cut(s) 265
MaeI CTAG 1 cut(s) 728
MaeII ACGT 3 cut(s) 187, 362, 430
MaeIII GTNAC 1 cut(s) 426
MalI GATC 6 cut(s) 246, 340, 352, 565, 578, 592
MbiI CCGCTC 1 cut(s) 89
MboI GATC 6 cut(s) 244, 338, 350, 563, 576, 590
MboII GAAGA 5 cut(s) 348, 424, 427, 473, 581
MflI RGATCY 1 cut(s) 350
MhlI GDGCHC 2 cut(s) 164, 481
MluCI AATT 6 cut(s) 42, 124, 344, 505, 546, 662
Mly113I GGCGCC 1 cut(s) 61
MlyI GAGTC 3 cut(s) 246, 331, 744
MmeI TCCRAC 3 cut(s) 305, 352, 608
MnlI CCTC 7 cut(s) 171, 281, 396, 464, 482, 510, 639
MreI CGCCGGCG 1 cut(s) 63
MroNI GCCGGC 1 cut(s) 63
MseI TTAA 1 cut(s) 437
MslI CAYNNNNRTG 1 cut(s) 538
MspI CCGG 7 cut(s) 64, 109, 114, 132, 227, 233, 354
MspR9I CCNGG 6 cut(s) 96, 109, 110, 115, 234, 355
MvaI CCWGG 1 cut(s) 96
MvnI CGCG 5 cut(s) 15, 69, 205, 207, 721
MwoI GCNNNNNNNGC 5 cut(s) 34, 213, 450, 535, 770
NaeI GCCGGC 1 cut(s) 65
NarI GGCGCC 1 cut(s) 61
NciI CCSGG 5 cut(s) 109, 110, 115, 234, 355
NdeII GATC 6 cut(s) 244, 338, 350, 563, 576, 590
NgoMIV GCCGGC 1 cut(s) 63
NlaIII CATG 4 cut(s) 78, 213, 757, 793
NlaIV GGNNCC 3 cut(s) 62, 93, 231
NmeAIII GCCGAG 1 cut(s) 54
NmuCI GTSAC 1 cut(s) 426
NspI RCATGY 1 cut(s) 213
OliI CACNNNNGTG 1 cut(s) 538
PaeI GCATGC 1 cut(s) 213
PauI GCGCGC 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 486
PcsI WCGNNNNNNNCGW 2 cut(s) 302, 331
PdiI GCCGGC 1 cut(s) 65
PfeI GAWTC 2 cut(s) 223, 572
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 6 cut(s) 39, 55, 215, 443, 585, 681
Ple19I CGATCG 1 cut(s) 247
PleI GAGTC 3 cut(s) 245, 330, 744
PluTI GGCGCC 1 cut(s) 64
PpsI GAGTC 3 cut(s) 245, 330, 744
PpuMI RGGWCCY 1 cut(s) 92
Psp124BI GAGCTC 1 cut(s) 481
Psp5II RGGWCCY 1 cut(s) 92
Psp6I CCWGG 1 cut(s) 94
PspFI CCCAGC 2 cut(s) 309, 769
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 3 cut(s) 62, 93, 231
PspPI GGNCC 6 cut(s) 26, 92, 98, 111, 622, 702
PspPPI RGGWCCY 1 cut(s) 92
PstI CTGCAG 1 cut(s) 218
PsuI RGATCY 1 cut(s) 350
PteI GCGCGC 1 cut(s) 205
PvuI CGATCG 1 cut(s) 247
RsaI GTAC 2 cut(s) 190, 715
RsaNI GTAC 2 cut(s) 189, 714
RseI CAYNNNNRTG 1 cut(s) 538
SacI GAGCTC 1 cut(s) 481
SalI GTCGAC 1 cut(s) 358
SapI GCTCTTC 1 cut(s) 486
SaqAI TTAA 1 cut(s) 437
SatI GCNGC 6 cut(s) 38, 54, 214, 442, 584, 680
Sau3AI GATC 6 cut(s) 244, 338, 350, 563, 576, 590
Sau96I GGNCC 6 cut(s) 26, 92, 98, 111, 622, 702
SchI GAGTC 3 cut(s) 246, 331, 744
ScrFI CCNGG 6 cut(s) 96, 109, 110, 115, 234, 355
SduI GDGCHC 2 cut(s) 164, 481
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 1 cut(s) 214
SfiI GGCCNNNNNGGCC 1 cut(s) 34
SfoI GGCGCC 1 cut(s) 62
SgrAI CRCCGGYG 1 cut(s) 63
SinI GGWCC 3 cut(s) 92, 98, 702
SmaI CCCGGG 1 cut(s) 110
SmiMI CAYNNNNRTG 1 cut(s) 538
SphI GCATGC 1 cut(s) 213
Sse9I AATT 6 cut(s) 42, 124, 344, 505, 546, 662
SsiI CCGC 9 cut(s) 15, 38, 69, 89, 157, 291, 441, 538, 583
SspDI GGCGCC 1 cut(s) 60
SspMI CTAG 1 cut(s) 728
SstI GAGCTC 1 cut(s) 481
StyD4I CCNGG 6 cut(s) 94, 107, 108, 113, 232, 353
StyI CCWWGG 1 cut(s) 674
TaiI ACGT 3 cut(s) 190, 365, 433
TaqI TCGA 6 cut(s) 122, 176, 247, 341, 359, 575
TasI AATT 6 cut(s) 42, 124, 344, 505, 546, 662
TauI GCSGC 3 cut(s) 40, 444, 586
TfiI GAWTC 2 cut(s) 223, 572
Tru1I TTAA 1 cut(s) 437
Tru9I TTAA 1 cut(s) 437
TscAI CASTG 2 cut(s) 600, 613
TseFI GTSAC 1 cut(s) 426
TseI GCWGC 3 cut(s) 53, 213, 679
Tsp45I GTSAC 1 cut(s) 426
TspMI CCCGGG 1 cut(s) 108
TspRI CASTG 2 cut(s) 600, 613
VpaK11BI GGWCC 3 cut(s) 92, 98, 702
XbaI TCTAGA 1 cut(s) 727
XceI RCATGY 1 cut(s) 213
XmaI CCCGGG 1 cut(s) 108
XmiI GTMKAC 1 cut(s) 359
XspI CTAG 1 cut(s) 728
ZraI GACGTC 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.