Apoptotic chromatin condensation inducer in the nucleus
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0141291 RchiOBHm_Chr6g0273411 |
| rosa_laevigata | RLG00000001783 RLG00000001792 RLG00000020110 |
| rosa_samantha | Rh3BG029400 Rh3CG028200 Rh3DG029100 Rh5DG259500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 7 |
| AciI | CCGC | 2 cut(s) | 5, 42 |
| AclWI | GGATC | 1 cut(s) | 92 |
| AcsI | RAATTY | 2 cut(s) | 220, 391 |
| AcuI | CTGAAG | 2 cut(s) | 261, 522 |
| AcyI | GRCGYC | 2 cut(s) | 39, 68 |
| AfaI | GTAC | 1 cut(s) | 377 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 331, 332 |
| AflIII | ACRYGT | 1 cut(s) | 263 |
| AgsI | TTSAA | 3 cut(s) | 206, 305, 459 |
| AjiI | CACGTC | 1 cut(s) | 264 |
| AluBI | AGCT | 3 cut(s) | 300, 602, 625 |
| AluI | AGCT | 3 cut(s) | 300, 602, 625 |
| Alw26I | GTCTC | 1 cut(s) | 18 |
| AlwI | GGATC | 1 cut(s) | 92 |
| AoxI | GGCC | 1 cut(s) | 322 |
| ApeKI | GCWGC | 2 cut(s) | 107, 611 |
| ApoI | RAATTY | 2 cut(s) | 220, 391 |
| AspS9I | GGNCC | 1 cut(s) | 323 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 564, 597 |
| BbvI | GCAGC | 2 cut(s) | 94, 598 |
| BciVI | GTATCC | 1 cut(s) | 565 |
| BclI | TGATCA | 1 cut(s) | 30 |
| BcoDI | GTCTC | 1 cut(s) | 18 |
| BfaI | CTAG | 1 cut(s) | 297 |
| BfuI | GTATCC | 1 cut(s) | 565 |
| BisI | GCNGC | 4 cut(s) | 5, 42, 108, 612 |
| BlsI | GCNGC | 4 cut(s) | 6, 43, 109, 613 |
| BmgBI | CACGTC | 1 cut(s) | 264 |
| BmgT120I | GGNCC | 1 cut(s) | 323 |
| BmsI | GCATC | 1 cut(s) | 53 |
| BpmI | CTGGAG | 1 cut(s) | 429 |
| BsaHI | GRCGYC | 2 cut(s) | 39, 68 |
| BsaJI | CCNNGG | 1 cut(s) | 80 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 474, 504 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 331, 332 |
| BseDI | CCNNGG | 1 cut(s) | 80 |
| BseGI | GGATG | 3 cut(s) | 373, 436, 595 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 331, 332 |
| BseMII | CTCAG | 1 cut(s) | 393 |
| BseXI | GCAGC | 2 cut(s) | 94, 598 |
| Bsh1236I | CGCG | 1 cut(s) | 7 |
| BshFI | GGCC | 1 cut(s) | 324 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 331, 332 |
| BsmAI | GTCTC | 1 cut(s) | 18 |
| BsnI | GGCC | 1 cut(s) | 324 |
| Bsp143I | GATC | 2 cut(s) | 30, 84 |
| BspACI | CCGC | 2 cut(s) | 5, 42 |
| BspANI | GGCC | 1 cut(s) | 324 |
| BspCNI | CTCAG | 1 cut(s) | 392 |
| BspFNI | CGCG | 1 cut(s) | 7 |
| BspPI | GGATC | 1 cut(s) | 92 |
| BspQI | GCTCTTC | 1 cut(s) | 609 |
| BssECI | CCNNGG | 1 cut(s) | 80 |
| BssMI | GATC | 2 cut(s) | 30, 84 |
| BssNI | GRCGYC | 2 cut(s) | 39, 68 |
| Bst4CI | ACNGT | 1 cut(s) | 443 |
| Bst6I | CTCTTC | 2 cut(s) | 420, 609 |
| BstACI | GRCGYC | 2 cut(s) | 39, 68 |
| BstDEI | CTNAG | 1 cut(s) | 379 |
| BstF5I | GGATG | 3 cut(s) | 373, 436, 595 |
| BstFNI | CGCG | 1 cut(s) | 7 |
| BstKTI | GATC | 2 cut(s) | 33, 87 |
| BstMAI | GTCTC | 1 cut(s) | 18 |
| BstMBI | GATC | 2 cut(s) | 30, 84 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 116, 608 |
| BstUI | CGCG | 1 cut(s) | 7 |
| BstV1I | GCAGC | 2 cut(s) | 94, 598 |
| BsuI | GTATCC | 1 cut(s) | 565 |
| BsuRI | GGCC | 1 cut(s) | 324 |
| BtrI | CACGTC | 1 cut(s) | 264 |
| BtsCI | GGATG | 3 cut(s) | 373, 436, 595 |
| Cfr13I | GGNCC | 1 cut(s) | 323 |
| CseI | GACGC | 2 cut(s) | 47, 76 |
| Csp6I | GTAC | 1 cut(s) | 376 |
| CviAII | CATG | 1 cut(s) | 530 |
| CviJI | RGCY | 7 cut(s) | 152, 168, 239, 300, 324, 602, 625 |
| CviKI_1 | RGCY | 7 cut(s) | 152, 168, 239, 300, 324, 602, 625 |
| CviQI | GTAC | 1 cut(s) | 376 |
| DdeI | CTNAG | 1 cut(s) | 379 |
| DpnI | GATC | 2 cut(s) | 32, 86 |
| DpnII | GATC | 2 cut(s) | 30, 84 |
| Eam1104I | CTCTTC | 2 cut(s) | 420, 609 |
| EarI | CTCTTC | 2 cut(s) | 420, 609 |
| Eco57I | CTGAAG | 2 cut(s) | 261, 522 |
| EcoO109I | RGGNCCY | 1 cut(s) | 323 |
| FaeI | CATG | 1 cut(s) | 533 |
| FaiI | YATR | 7 cut(s) | 236, 256, 342, 422, 465, 477, 531 |
| FatI | CATG | 1 cut(s) | 529 |
| FbaI | TGATCA | 1 cut(s) | 30 |
| Fnu4HI | GCNGC | 4 cut(s) | 5, 42, 108, 612 |
| FokI | GGATG | 3 cut(s) | 380, 443, 582 |
| Fsp4HI | GCNGC | 4 cut(s) | 5, 42, 108, 612 |
| FspBI | CTAG | 1 cut(s) | 297 |
| GluI | GCNGC | 4 cut(s) | 5, 42, 108, 612 |
| GsuI | CTGGAG | 1 cut(s) | 429 |
| HaeIII | GGCC | 1 cut(s) | 324 |
| HgaI | GACGC | 2 cut(s) | 47, 76 |
| Hin1I | GRCGYC | 2 cut(s) | 39, 68 |
| Hin1II | CATG | 1 cut(s) | 533 |
| HindIII | AAGCTT | 1 cut(s) | 623 |
| HinfI | GANTC | 4 cut(s) | 416, 455, 592, 644 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 446 |
| Hpy188I | TCNGA | 5 cut(s) | 30, 63, 84, 382, 472 |
| Hpy188III | TCNNGA | 3 cut(s) | 128, 408, 648 |
| Hpy8I | GTNNAC | 1 cut(s) | 446 |
| Hpy99I | CGWCG | 1 cut(s) | 70 |
| HpyAV | CCTTC | 3 cut(s) | 68, 236, 314 |
| HpyCH4III | ACNGT | 1 cut(s) | 443 |
| HpyCH4IV | ACGT | 1 cut(s) | 263 |
| HpyCH4V | TGCA | 1 cut(s) | 515 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 116, 608 |
| HpyF3I | CTNAG | 1 cut(s) | 379 |
| HpySE526I | ACGT | 1 cut(s) | 263 |
| Hsp92I | GRCGYC | 2 cut(s) | 39, 68 |
| Hsp92II | CATG | 1 cut(s) | 533 |
| Ksp22I | TGATCA | 1 cut(s) | 30 |
| Kzo9I | GATC | 2 cut(s) | 30, 84 |
| LguI | GCTCTTC | 1 cut(s) | 609 |
| LpnPI | CCDG | 4 cut(s) | 393, 422, 612, 621 |
| Lsp1109I | GCAGC | 2 cut(s) | 94, 598 |
| LweI | GCATC | 1 cut(s) | 53 |
| MaeI | CTAG | 1 cut(s) | 297 |
| MaeII | ACGT | 1 cut(s) | 263 |
| MalI | GATC | 2 cut(s) | 32, 86 |
| MboI | GATC | 2 cut(s) | 30, 84 |
| MboII | GAAGA | 3 cut(s) | 437, 515, 596 |
| MluCI | AATT | 6 cut(s) | 201, 220, 386, 391, 450, 553 |
| MlyI | GAGTC | 1 cut(s) | 653 |
| MseI | TTAA | 3 cut(s) | 200, 389, 627 |
| MslI | CAYNNNNRTG | 2 cut(s) | 276, 534 |
| MvnI | CGCG | 1 cut(s) | 7 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 116, 608 |
| NdeII | GATC | 2 cut(s) | 30, 84 |
| NlaIII | CATG | 1 cut(s) | 533 |
| PciSI | GCTCTTC | 1 cut(s) | 609 |
| PfeI | GAWTC | 3 cut(s) | 416, 455, 592 |
| PkrI | GCNGC | 4 cut(s) | 6, 43, 109, 613 |
| PleI | GAGTC | 1 cut(s) | 652 |
| PpsI | GAGTC | 1 cut(s) | 652 |
| PspPI | GGNCC | 1 cut(s) | 323 |
| RsaI | GTAC | 1 cut(s) | 377 |
| RsaNI | GTAC | 1 cut(s) | 376 |
| RseI | CAYNNNNRTG | 2 cut(s) | 276, 534 |
| SapI | GCTCTTC | 1 cut(s) | 609 |
| SaqAI | TTAA | 3 cut(s) | 200, 389, 627 |
| SatI | GCNGC | 4 cut(s) | 5, 42, 108, 612 |
| Sau3AI | GATC | 2 cut(s) | 30, 84 |
| Sau96I | GGNCC | 1 cut(s) | 323 |
| SchI | GAGTC | 1 cut(s) | 653 |
| SetI | ASST | 8 cut(s) | 78, 82, 200, 266, 302, 511, 604, 627 |
| SfaNI | GCATC | 1 cut(s) | 53 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 276, 534 |
| Sse9I | AATT | 6 cut(s) | 201, 220, 386, 391, 450, 553 |
| SsiI | CCGC | 2 cut(s) | 5, 42 |
| SspMI | CTAG | 1 cut(s) | 297 |
| TaaI | ACNGT | 1 cut(s) | 443 |
| TaiI | ACGT | 1 cut(s) | 266 |
| TaqI | TCGA | 1 cut(s) | 147 |
| TasI | AATT | 6 cut(s) | 201, 220, 386, 391, 450, 553 |
| TauI | GCSGC | 2 cut(s) | 7, 44 |
| TfiI | GAWTC | 3 cut(s) | 416, 455, 592 |
| Tru1I | TTAA | 3 cut(s) | 200, 389, 627 |
| Tru9I | TTAA | 3 cut(s) | 200, 389, 627 |
| TseI | GCWGC | 2 cut(s) | 107, 611 |
| TspDTI | ATGAA | 2 cut(s) | 333, 357 |
| XapI | RAATTY | 2 cut(s) | 220, 391 |
| XspI | CTAG | 1 cut(s) | 297 |