RLG00000002085

Protein tyrosine kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
25230226 .. 25234279
4054 bp
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UTR
Exon/CDS
Intron
RLM00000002085

Sequence Viewer

Length: 1605 bp
ATGAGAACTGAGAGGGAGGTGCCAAGAGAGGCTGTGATTGTGGCGGTGGACGCAAAAAGGAGCAAGGAAAACTTGGAAACAGTGGAATGGGCCTTCAGATACTTGGTTCGTCCAGGAGACATCCTCCTTGTCTTGGGAGTTTTGCATGATGACCAACTCGGACAACCCAAGAAGCACTCCTGCTTTCCCTCCTTCAATTTTTTCTTAGCCACTAGCCATTGCGAGAGATCAGGAATGGTTGACTACGAGGAACTGGATTCTATCGAGCTTAAAGAGACATACGAGAAAAGGAGAGGAGAGTACCAGATTAGCCTCCAAACTATAAGCCGCCAATGCCAAAGCAATGATGTGAAGTTGCAACTTAAATTTGCGGCGGGGTATTGTCCTGCGAGATTGGCAATTGAGGAAGCACAAAACCTTAATACCCGGTGGATCGTATTGGACAGTCACTTTAGGAAATCCCAACTTTTTCTACGGGGACATGTAAGCTGCAACATTGCAGTAATGAAGGGTAAACATTTCGCTACCTTGATGCTGTCAGAAGCTACCCCACCTGACATCTTTCCTGGAAATTCTGAAGAGAGTTACAATTCAGCTCCTACAGACAATCCTATGGAAGTGCCTACTAAAAGTTTAAGTCCTGATCAATTAAGAAAGTCACATGCACCCACACCTCATTGTCAAAATCCTTGTTGCTACCCAATGTCTTGGAGAACTGGCTTCCCTCGAGTATTTTCGCACAATGAAATTGAAGTGATAACAAATGGCTTTGCCGATGACTACACATCAAAAGAAATGGAGGGCTTGAAAGTTTACCAAGGAATATTGCAAGACACAACTGTTTTAGTCAAGTCTTTTGAAGAGGAAGTAAATAAATGCTTCTGGTCAATGCTGGTGATCCTTTCTCGGGTATGTCACCGCAATATCATGAACCTTGTAGGGTACTGCTACACTGGTGCTGCTGCATACTTGATCCTTGACTTTCCATGTTTGGGTAACATGGAATACAACTTGCGAATTGAGGAATTGGCTCAGAAGCTGGGGTGGAAAGCAAGGTGGTATATTGCTCTAGAGATAGGCGGAAGCTTGCGCTATCTTCATGAGGAATGTGCTGATGGTTCTATTGTTCACAAATCTGTTTGTTCATGTAGTGTTGCACTTTCTCATGATTACTCTGCAATGCTTACCAGATTCACAACTGCTGAATGGCTTGCTGAATGTGTTCCCCATGATGAAGATTTGATTGCCAGATGCTCAAATTTCGAAGAAGACGAGAGCCTTTTTGTAGATGTACGCGGATATGGGAAATTCCTCCTGGAGCTTATTACAGGAAAAAGTGCATGTAGCTTTCCAAACCAAGGGAAGGATCAGTCCATGATTGACTGGGCATTGCCACTTCTAGAAAATGGTGCGCTTAGGAACCTAATGGACTGCCGAGTGACAGAAAGTGCTGGTGACGATAGATTGGTACGTCAGATGGCCCATGCCGCATTGCGCTGCCTAAATGTTGATTCAGATCACAAACTTTCAATAAGCGAGGCCTTGGCCATTGTTCGAGGTGATGAACTTGTGGTATCCGTTCAAGCCCTGAAGATTTTTGAATAA

Protein Analysis

535

Amino Acids

60.5

Weight (kDa)

5.48

Isoelectric Point (pI)

43.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 270 - 398 1.9e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 19
AccII CGCG 1 cut(s) 1296
AciI CCGC 8 cut(s) 44, 328, 371, 374, 919, 1080, 1296, 1488
AclWI GGATC 4 cut(s) 440, 892, 967, 1374
AcoI YGGCCR 1 cut(s) 1545
AcsI RAATTY 4 cut(s) 365, 571, 1258, 1307
AcuI CTGAAG 2 cut(s) 79, 597
AfaI GTAC 4 cut(s) 302, 944, 1293, 1470
AfiI CCNNNNNNNGG 5 cut(s) 133, 907, 992, 1358, 1363
AflIII ACRYGT 1 cut(s) 481
AgsI TTSAA 7 cut(s) 196, 752, 808, 860, 1530, 1583, 1601
AjnI CCWGG 3 cut(s) 112, 565, 1314
AluBI AGCT 8 cut(s) 268, 489, 545, 596, 1039, 1086, 1321, 1347
AluI AGCT 8 cut(s) 268, 489, 545, 596, 1039, 1086, 1321, 1347
Alw26I GTCTC 2 cut(s) 111, 269
AlwI GGATC 4 cut(s) 440, 892, 967, 1374
AlwNI CAGNNNCTG 1 cut(s) 1039
Ama87I CYCGRG 2 cut(s) 726, 906
AoxI GGCC 4 cut(s) 90, 1479, 1539, 1545
ApeKI GCWGC 4 cut(s) 489, 959, 962, 1497
ApoI RAATTY 4 cut(s) 365, 571, 1258, 1307
Asp700I GAANNNNTTC 1 cut(s) 1221
AspLEI GCGC 3 cut(s) 1092, 1414, 1497
AspS9I GGNCC 2 cut(s) 90, 1480
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 4 cut(s) 907, 908, 1466, 1571
AsuII TTCGAA 1 cut(s) 1263
AvaI CYCGRG 2 cut(s) 726, 906
BalI TGGCCA 1 cut(s) 1547
BanI GGYRCC 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 1275
BbvI GCAGC 4 cut(s) 476, 946, 949, 1484
BccI CCATC 2 cut(s) 1109, 1471
BciT130I CCWGG 3 cut(s) 114, 567, 1316
BciVI GTATCC 1 cut(s) 1585
BclI TGATCA 1 cut(s) 643
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 2 cut(s) 111, 269
BfaI CTAG 3 cut(s) 213, 1070, 1400
BfmI CTRYAG 1 cut(s) 600
BfuI GTATCC 1 cut(s) 1585
BisI GCNGC 7 cut(s) 328, 372, 490, 960, 963, 1488, 1498
BlsI GCNGC 7 cut(s) 329, 373, 491, 961, 964, 1489, 1499
Bme1390I CCNGG 4 cut(s) 114, 427, 567, 1316
BmeT110I CYCGRG 2 cut(s) 726, 906
BmgT120I GGNCC 2 cut(s) 90, 1480
BmiI GGNNCC 2 cut(s) 21, 1421
BmrFI CCNGG 4 cut(s) 114, 427, 567, 1316
BmrI ACTGGG 1 cut(s) 1393
BmsI GCATC 2 cut(s) 522, 1241
BmuI ACTGGG 1 cut(s) 1393
BpiI GAAGAC 1 cut(s) 1275
BplI GAGNNNNNCTC 2 cut(s) 108, 140
BpmI CTGGAG 1 cut(s) 1337
Bpu10I CCTNAGC 1 cut(s) 1415
Bpu14I TTCGAA 1 cut(s) 1263
BpuMI CCSGG 1 cut(s) 427
BsaBI GATNNNNATC 1 cut(s) 1515
BsaJI CCNNGG 3 cut(s) 817, 1357, 1542
Bsc4I CCNNNNNNNGG 5 cut(s) 133, 907, 992, 1358, 1363
Bse1I ACTGG 4 cut(s) 258, 721, 958, 1388
Bse3DI GCAATG 6 cut(s) 217, 349, 495, 1185, 1388, 1490
Bse8I GATNNNNATC 1 cut(s) 1515
BseBI CCWGG 3 cut(s) 114, 567, 1316
BseDI CCNNGG 3 cut(s) 817, 1357, 1542
BseGI GGATG 1 cut(s) 120
BseJI GATNNNNATC 1 cut(s) 1515
BseLI CCNNNNNNNGG 5 cut(s) 133, 907, 992, 1358, 1363
BseMI GCAATG 6 cut(s) 217, 349, 495, 1185, 1388, 1490
BseMII CTCAG 1 cut(s) 1046
BseNI ACTGG 4 cut(s) 258, 721, 958, 1388
BseRI GAGGAG 1 cut(s) 309
BseXI GCAGC 4 cut(s) 476, 946, 949, 1484
BseYI CCCAGC 1 cut(s) 1039
Bsh1236I CGCG 1 cut(s) 1296
BshFI GGCC 4 cut(s) 92, 1481, 1541, 1547
BshNI GGYRCC 1 cut(s) 19
BsiHKCI CYCGRG 2 cut(s) 726, 906
BsiSI CCGG 1 cut(s) 427
BslFI GGGAC 1 cut(s) 492
BslI CCNNNNNNNGG 5 cut(s) 133, 907, 992, 1358, 1363
BsmAI GTCTC 2 cut(s) 111, 269
BsmFI GGGAC 1 cut(s) 492
BsnI GGCC 4 cut(s) 92, 1481, 1541, 1547
BsoBI CYCGRG 2 cut(s) 726, 906
Bsp119I TTCGAA 1 cut(s) 1263
Bsp143I GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
BspACI CCGC 8 cut(s) 44, 328, 371, 374, 919, 1080, 1296, 1488
BspANI GGCC 4 cut(s) 92, 1481, 1541, 1547
BspCNI CTCAG 1 cut(s) 1045
BspFNI CGCG 1 cut(s) 1296
BspHI TCATGA 3 cut(s) 927, 1099, 1165
BspLI GGNNCC 2 cut(s) 21, 1421
BspPI GGATC 4 cut(s) 440, 892, 967, 1374
BspT104I TTCGAA 1 cut(s) 1263
BspT107I GGYRCC 1 cut(s) 19
BsrDI GCAATG 6 cut(s) 217, 349, 495, 1185, 1388, 1490
BsrI ACTGG 4 cut(s) 258, 721, 958, 1388
BssECI CCNNGG 3 cut(s) 817, 1357, 1542
BssMI GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
BssT1I CCWWGG 3 cut(s) 817, 1357, 1542
Bst2UI CCWGG 3 cut(s) 114, 567, 1316
Bst4CI ACNGT 3 cut(s) 82, 446, 841
Bst6I CTCTTC 2 cut(s) 573, 855
BstBI TTCGAA 1 cut(s) 1263
BstC8I GCNNGC 2 cut(s) 1088, 1212
BstDEI CTNAG 4 cut(s) 9, 205, 1032, 1415
BstF5I GGATG 1 cut(s) 120
BstFNI CGCG 1 cut(s) 1296
BstHHI GCGC 3 cut(s) 1092, 1414, 1497
BstKTI GATC 7 cut(s) 230, 435, 646, 900, 975, 1369, 1519
BstMAI GTCTC 2 cut(s) 111, 269
BstMBI GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
BstMWI GCNNNNNNNGC 4 cut(s) 50, 333, 395, 1487
BstNI CCWGG 3 cut(s) 114, 567, 1316
BstNSI RCATGY 3 cut(s) 485, 665, 1344
BstSCI CCNGG 4 cut(s) 112, 425, 565, 1314
BstSFI CTRYAG 1 cut(s) 600
BstUI CGCG 1 cut(s) 1296
BstV1I GCAGC 4 cut(s) 476, 946, 949, 1484
BstV2I GAAGAC 1 cut(s) 1275
BstXI CCANNNNNNTGG 1 cut(s) 708
BsuI GTATCC 1 cut(s) 1585
BsuRI GGCC 4 cut(s) 92, 1481, 1541, 1547
BtsCI GGATG 1 cut(s) 120
BtsIMutI CAGTG 2 cut(s) 87, 951
Cac8I GCNNGC 2 cut(s) 1088, 1212
CaiI CAGNNNCTG 1 cut(s) 1039
CciI TCATGA 3 cut(s) 927, 1099, 1165
CfoI GCGC 3 cut(s) 1092, 1414, 1497
Cfr13I GGNCC 2 cut(s) 90, 1480
CseI GACGC 1 cut(s) 59
Csp6I GTAC 4 cut(s) 301, 943, 1292, 1469
CviQI GTAC 4 cut(s) 301, 943, 1292, 1469
DdeI CTNAG 4 cut(s) 9, 205, 1032, 1415
DpnI GATC 7 cut(s) 229, 434, 645, 899, 974, 1368, 1518
DpnII GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
EaeI YGGCCR 1 cut(s) 1545
Eam1104I CTCTTC 2 cut(s) 573, 855
EarI CTCTTC 2 cut(s) 573, 855
EciI GGCGGA 1 cut(s) 1095
Eco130I CCWWGG 3 cut(s) 817, 1357, 1542
Eco147I AGGCCT 1 cut(s) 1541
Eco57I CTGAAG 2 cut(s) 79, 597
Eco88I CYCGRG 2 cut(s) 726, 906
EcoRII CCWGG 3 cut(s) 112, 565, 1314
EcoT14I CCWWGG 3 cut(s) 817, 1357, 1542
ErhI CCWWGG 3 cut(s) 817, 1357, 1542
FalI AAGNNNNNCTT 2 cut(s) 56, 88
FaqI GGGAC 1 cut(s) 492
FauI CCCGC 1 cut(s) 367
FbaI TGATCA 1 cut(s) 643
Fnu4HI GCNGC 7 cut(s) 328, 372, 490, 960, 963, 1488, 1498
FokI GGATG 1 cut(s) 107
Fsp4HI GCNGC 7 cut(s) 328, 372, 490, 960, 963, 1488, 1498
FspBI CTAG 3 cut(s) 213, 1070, 1400
GlaI GCGC 3 cut(s) 1091, 1413, 1496
GluI GCNGC 7 cut(s) 328, 372, 490, 960, 963, 1488, 1498
GsaI CCCAGC 1 cut(s) 1043
GsuI CTGGAG 1 cut(s) 1337
HaeIII GGCC 4 cut(s) 92, 1481, 1541, 1547
HapII CCGG 1 cut(s) 427
HgaI GACGC 1 cut(s) 59
HhaI GCGC 3 cut(s) 1092, 1414, 1497
Hin6I GCGC 3 cut(s) 1090, 1412, 1495
HinP1I GCGC 3 cut(s) 1090, 1412, 1495
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 1 cut(s) 1084
HinfI GANTC 3 cut(s) 257, 1191, 1511
HpaII CCGG 1 cut(s) 427
HphI GGTGA 4 cut(s) 907, 908, 1466, 1571
Hpy166II GTNNAC 5 cut(s) 49, 241, 515, 814, 1129
Hpy188I TCNGA 7 cut(s) 98, 161, 541, 577, 1035, 1476, 1516
Hpy188III TCNNGA 7 cut(s) 231, 641, 928, 1070, 1100, 1166, 1400
Hpy8I GTNNAC 5 cut(s) 49, 241, 515, 814, 1129
HpyAV CCTTC 4 cut(s) 103, 202, 502, 1357
HpyCH4III ACNGT 3 cut(s) 82, 446, 841
HpyCH4IV ACGT 1 cut(s) 1471
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 333, 395, 1487
HpyF3I CTNAG 4 cut(s) 9, 205, 1032, 1415
HpySE526I ACGT 1 cut(s) 1471
HspAI GCGC 3 cut(s) 1090, 1412, 1495
Ksp22I TGATCA 1 cut(s) 643
Kzo9I GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
LmnI GCTCC 3 cut(s) 60, 601, 1318
Lsp1109I GCAGC 4 cut(s) 476, 946, 949, 1484
LweI GCATC 2 cut(s) 522, 1241
MaeI CTAG 3 cut(s) 213, 1070, 1400
MaeII ACGT 1 cut(s) 1471
MaeIII GTNAC 7 cut(s) 446, 584, 657, 914, 995, 1438, 1454
MalI GATC 7 cut(s) 229, 434, 645, 899, 974, 1368, 1518
MboI GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
MboII GAAGA 7 cut(s) 590, 872, 1088, 1247, 1277, 1280, 1603
MfeI CAATTG 1 cut(s) 399
MlsI TGGCCA 1 cut(s) 1547
MluNI TGGCCA 1 cut(s) 1547
Mox20I TGGCCA 1 cut(s) 1547
MroXI GAANNNNTTC 1 cut(s) 1221
MscI TGGCCA 1 cut(s) 1547
MseI TTAA 5 cut(s) 270, 363, 420, 635, 650
Msp20I TGGCCA 1 cut(s) 1547
MspI CCGG 1 cut(s) 427
MspR9I CCNGG 4 cut(s) 114, 427, 567, 1316
MunI CAATTG 1 cut(s) 399
MvaI CCWGG 3 cut(s) 114, 567, 1316
MvnI CGCG 1 cut(s) 1296
MwoI GCNNNNNNNGC 4 cut(s) 50, 333, 395, 1487
NciI CCSGG 1 cut(s) 427
NdeII GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
NlaIV GGNNCC 2 cut(s) 21, 1421
NmeAIII GCCGAG 1 cut(s) 1460
NmuCI GTSAC 5 cut(s) 446, 657, 914, 1438, 1454
NspI RCATGY 3 cut(s) 485, 665, 1344
NspV TTCGAA 1 cut(s) 1263
PaeR7I CTCGAG 1 cut(s) 726
PagI TCATGA 3 cut(s) 927, 1099, 1165
PceI AGGCCT 1 cut(s) 1541
PciI ACATGT 1 cut(s) 481
PcsI WCGNNNNNNNCGW 1 cut(s) 1269
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 3 cut(s) 257, 1191, 1511
PfoI TCCNGGA 3 cut(s) 112, 565, 1314
PkrI GCNGC 7 cut(s) 329, 373, 491, 961, 964, 1489, 1499
PscI ACATGT 1 cut(s) 481
Psp6I CCWGG 3 cut(s) 112, 565, 1314
PspFI CCCAGC 1 cut(s) 1039
PspGI CCWGG 3 cut(s) 112, 565, 1314
PspN4I GGNNCC 2 cut(s) 21, 1421
PspPI GGNCC 2 cut(s) 90, 1480
PspXI VCTCGAGB 1 cut(s) 726
PstNI CAGNNNCTG 1 cut(s) 1039
RsaI GTAC 4 cut(s) 302, 944, 1293, 1470
RsaNI GTAC 4 cut(s) 301, 943, 1292, 1469
SaqAI TTAA 5 cut(s) 270, 363, 420, 635, 650
SatI GCNGC 7 cut(s) 328, 372, 490, 960, 963, 1488, 1498
Sau3AI GATC 7 cut(s) 227, 432, 643, 897, 972, 1366, 1516
Sau96I GGNCC 2 cut(s) 90, 1480
ScrFI CCNGG 4 cut(s) 114, 427, 567, 1316
SfaNI GCATC 2 cut(s) 522, 1241
SfcI CTRYAG 1 cut(s) 600
Sfr274I CTCGAG 1 cut(s) 726
SfuI TTCGAA 1 cut(s) 1263
SlaI CTCGAG 1 cut(s) 726
SmlI CTYRAG 1 cut(s) 726
SmoI CTYRAG 1 cut(s) 726
SseBI AGGCCT 1 cut(s) 1541
SsiI CCGC 8 cut(s) 44, 328, 371, 374, 919, 1080, 1296, 1488
SspI AATATT 1 cut(s) 825
SspMI CTAG 3 cut(s) 213, 1070, 1400
StuI AGGCCT 1 cut(s) 1541
StyD4I CCNGG 4 cut(s) 112, 425, 565, 1314
StyI CCWWGG 3 cut(s) 817, 1357, 1542
TaaI ACNGT 3 cut(s) 82, 446, 841
TaiI ACGT 1 cut(s) 1474
TaqI TCGA 4 cut(s) 264, 727, 1263, 1555
TauI GCSGC 3 cut(s) 330, 374, 1490
TfiI GAWTC 3 cut(s) 257, 1191, 1511
Tru1I TTAA 5 cut(s) 270, 363, 420, 635, 650
Tru9I TTAA 5 cut(s) 270, 363, 420, 635, 650
TscAI CASTG 2 cut(s) 87, 958
TseFI GTSAC 5 cut(s) 446, 657, 914, 1438, 1454
TseI GCWGC 4 cut(s) 489, 959, 962, 1497
Tsp45I GTSAC 5 cut(s) 446, 657, 914, 1438, 1454
TspDTI ATGAA 7 cut(s) 521, 759, 944, 1088, 1134, 1248, 1578
TspGWI ACGGA 1 cut(s) 1567
TspRI CASTG 2 cut(s) 87, 958
XapI RAATTY 4 cut(s) 365, 571, 1258, 1307
XbaI TCTAGA 2 cut(s) 1069, 1399
XceI RCATGY 3 cut(s) 485, 665, 1344
XhoI CTCGAG 1 cut(s) 726
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 3 cut(s) 213, 1070, 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.