Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0013998

Physical Location & Seq

Genomic Coordinates Reverse (-)

58311999 .. 58313657

Gene Structure 1659 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004320

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTTGTTTCAGTTCCAATTGCTTCACCTGGACCTGTCCAAGGTTTACCAATCTTTATCAAGAACCAAACAATTGCATGCTTTGATTATCAAGACCCATCTTTCCCATGACCCATTTTATGCAACTAGAATAGTTAGATTCTATGCAGTCCATGGTGACCTTCACTCTGCACGTAAGGTGTTCGATGAAAGTCCCAGCCGAAGTGTTTATCTTTGGAATTCCATTATTCGAGCCCACGCTCAAGCTCACAAATTTGACCATGCATTTTCTCTGTTTAATAGGATGGTTAGAAGTGAAACCAAACCTGATAACTTCACTTATGCTTGTCTTATACGTGCCTGCTCTGACAACTTTGATTTAGAAGGACTGAGACTTATGCATTGTGGAGTTACAGTTTCTGGGTTGGGACTAGACTCAATTTGTAGCAGTGCACTTGTTACTGCTTATTCAAAACTGGGCCTTGTTGATGAAGCAAGTAGGGTGTTTCATGGGACACCGCAGCTGGACTTGGTAATGTGGAATTCTATGATTTCGGGTTATGGAAATTTCAGGTTTTGGGATAAAGGGCTAGAATTGTTTAGTATGATGAGATGCATGAAGGTAGTGCCTGATGGATATACATTTGTCGGGTTGCTTTCGGGTTTAAAAGATTCGAGCTTGATAAGTGTTGGCCAAGGAATGCATGGTCTTTGTTTGAAAAGTAATTTGGATTCTAATGATCATGTATGTAGTGTACTTGTGAGCATGTATTCAAGATGCAGGTGTATGGACTCTGCACATAAAGTTTTTAGTGGTTTGTTTGAGCCAGATTTAGTTACTTGGTCTTCTTTGATAACTGGGTATTCTCAGTCTGGAGATTATGAGAAGGCATTGTTCTTCTTCAAGTGTTTGAACATGGAAGGCAAGAAGGCAGATCCTATTTTGATTGCCAGTGTGTTGGCTGCTGCTTCTCAGATAGCAAATGTAGCCCCTGGTAGTGAGATACATGCTTATGTTCTTCGACGTGGACTTGAATCAGATGTCATGATTTCCTCTGCTCTCATAGCCATGTATTCAAAGTGTGGTTTCATGGGGCTAGGGACTCGTGTTTTTAAGATCATGCCAGAGAAGAATATTGTTTCATACAATTCATTAATATTGGGTCTTGGTTTGCATGGACTTGCCGCGGAGGCGTTTAGAATGTTTAATGAGATACTGAGAAACGGATTAGTACCTGATGAATCTACTTTCTCTGCTCTCCTTTGTGCATGCTGTCATTCTGGCCTAGTCAAAGATGGCCGAGAAATTTTCAGAAAAATGAGAAAAGAGTTTGGCATTGAAGCTAGAGCAGATCATTATGTTCACCTGGTGAAGCTTCTTGGGATGGAGGGTAGGTTGGAAGAGGCTTACAATCTGATCTTGTCCTTGCCAGAACCAGTGGACAGTGGCATTTGGGGGGCACTTTTATCATGCTGTGATGCCTGTGGGGATTCTAAGCTGGCAGAAATTATAGCTCAAAAGCTCTTTGAAAGTAATTCTGAAAAAAGTGCTTACACAGTCATGCTTTCGAATATATATGCTGGTGATGGGAGGTGGGATGATTCAAAGAAGCTAAGGGATTACATTACAGAAGGACAATTGAGGAAGACGACTGGGGTTAGCTGGATTAAAGGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

553

Amino Acids

61.43

Weight (kDa)

7.83

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	68 - 115	6.3e-13	PPR repeat family
PPR_2	PF13041	169 - 215	2.7e-08	PPR repeat family
PPR	PF01535	171 - 199	3.6e-06	PPR repeat
PPR_2	PF13041	370 - 419	4.9e-12	PPR repeat family
E_motif	PF20431	491 - 550	1.2e-10	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64310
fragaria_vesca	FvH4_5g21730
malus_domestica	MD06G1168400.v1.1 MD06G1168500.v1.1 MD06G1168800.v1.1 MD06G1168900.v1.1
pyrus_communis	pycom06g15010 pycom06g15040
rosa_chinensis	RchiOBHm_Chr7g0192851
rosa_laevigata	RLG00000004320
rosa_roxburghii	Rroxscaffold_3G00262620
rosa_rugosa	Rorug07G0005100
rosa_samantha	Rh7AG130700 Rh7BG131600 Rh7CG134900 Rh7DG132700
rosa_wichuraiana	Rw7G011150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	750
Acc36I	ACCTGC	1 cut(s)	750
AccII	CGCG	1 cut(s)	1166
AciI	CCGC	3 cut(s)	497, 1164, 1166
AclWI	GGATC	1 cut(s)	908
AcoI	YGGCCR	2 cut(s)	670, 1276
AcsI	RAATTY	5 cut(s)	217, 251, 520, 544, 1284
AdeI	CACNNNGTG	1 cut(s)	1348
AfaI	GTAC	2 cut(s)	735, 1212
AfiI	CCNNNNNNNGG	1 cut(s)	40
AjiI	CACGTC	1 cut(s)	1004
AjnI	CCWGG	3 cut(s)	27, 970, 1344
AjuI	GAANNNNNNNTTGG	2 cut(s)	689, 721
Alw21I	GWGCWC	1 cut(s)	433
Alw26I	GTCTC	1 cut(s)	364
Alw44I	GTGCAC	1 cut(s)	429
AlwI	GGATC	1 cut(s)	908
AlwNI	CAGNNNCTG	1 cut(s)	398
AoxI	GGCC	4 cut(s)	457, 670, 1261, 1276
ApaLI	GTGCAC	1 cut(s)	429
ApeKI	GCWGC	3 cut(s)	499, 941, 944
ApoI	RAATTY	5 cut(s)	217, 251, 520, 544, 1284
AseI	ATTAAT	1 cut(s)	1133
AspS9I	GGNCC	2 cut(s)	31, 457
AsuHPI	GGTGA	5 cut(s)	17, 167, 1334, 1360, 1574
AsuII	TTCGAA	1 cut(s)	1547
AvaII	GGWCC	1 cut(s)	31
BaeGI	GKGCMC	2 cut(s)	433, 1441
BalI	TGGCCA	1 cut(s)	672
BanII	GRGCYC	1 cut(s)	235
BauI	CACGAG	1 cut(s)	1083
BbsI	GAAGAC	2 cut(s)	816, 1631
Bbv12I	GWGCWC	1 cut(s)	433
BbvI	GCAGC	3 cut(s)	511, 928, 931
BccI	CCATC	6 cut(s)	105, 277, 605, 1268, 1357, 1559
BciT130I	CCWGG	3 cut(s)	29, 972, 1346
BclI	TGATCA	1 cut(s)	718
BcoDI	GTCTC	1 cut(s)	364
BfaI	CTAG	6 cut(s)	126, 410, 569, 1076, 1265, 1323
BfuAI	ACCTGC	1 cut(s)	750
BglI	GCCNNNNNGGC	1 cut(s)	1169
BisI	GCNGC	4 cut(s)	500, 942, 945, 1164
BlsI	GCNGC	4 cut(s)	501, 943, 946, 1165
Bme1390I	CCNGG	3 cut(s)	29, 972, 1346
Bme18I	GGWCC	1 cut(s)	31
BmgBI	CACGTC	1 cut(s)	1004
BmgT120I	GGNCC	2 cut(s)	31, 457
BmrFI	CCNGG	3 cut(s)	29, 972, 1346
BmrI	ACTGGG	3 cut(s)	464, 846, 1641
BmsI	GCATC	3 cut(s)	581, 746, 1447
BmuI	ACTGGG	3 cut(s)	464, 846, 1641
BpiI	GAAGAC	2 cut(s)	816, 1631
BpmI	CTGGAG	1 cut(s)	873
Bpu10I	CCTNAGC	1 cut(s)	1592
Bpu14I	TTCGAA	1 cut(s)	1547
BpuEI	CTTGAG	1 cut(s)	225
BsaAI	YACGTR	2 cut(s)	173, 335
BsaJI	CCNNGG	5 cut(s)	39, 151, 673, 970, 1164
BsaXI	ACNNNNNCTCC	4 cut(s)	378, 408, 1358, 1388
Bsc4I	CCNNNNNNNGG	1 cut(s)	40
Bse1I	ACTGG	5 cut(s)	459, 841, 930, 1415, 1636
BseBI	CCWGG	3 cut(s)	29, 972, 1346
BseDI	CCNNGG	5 cut(s)	39, 151, 673, 970, 1164
BseGI	GGATG	3 cut(s)	288, 1368, 1582
BseLI	CCNNNNNNNGG	1 cut(s)	40
BseMII	CTCAG	4 cut(s)	359, 860, 965, 1187
BseNI	ACTGG	5 cut(s)	459, 841, 930, 1415, 1636
BseSI	GKGCMC	2 cut(s)	433, 1441
BseXI	GCAGC	3 cut(s)	511, 928, 931
BseYI	CCCAGC	1 cut(s)	194
BsgI	GTGCAG	2 cut(s)	153, 759
Bsh1236I	CGCG	1 cut(s)	1166
BshFI	GGCC	4 cut(s)	459, 672, 1263, 1278
BsiHKAI	GWGCWC	1 cut(s)	433
BslFI	GGGAC	4 cut(s)	177, 420, 505, 1093
BslI	CCNNNNNNNGG	1 cut(s)	40
BsmAI	GTCTC	1 cut(s)	364
BsmFI	GGGAC	4 cut(s)	177, 420, 505, 1093
BsmI	GAATGC	1 cut(s)	684
BsnI	GGCC	4 cut(s)	459, 672, 1263, 1278
Bsp119I	TTCGAA	1 cut(s)	1547
Bsp1286I	GDGCHC	3 cut(s)	235, 433, 1441
Bsp143I	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
Bsp19I	CCATGG	1 cut(s)	151
BspACI	CCGC	3 cut(s)	497, 1164, 1166
BspANI	GGCC	4 cut(s)	459, 672, 1263, 1278
BspCNI	CTCAG	4 cut(s)	360, 859, 964, 1188
BspFNI	CGCG	1 cut(s)	1166
BspHI	TCATGA	1 cut(s)	1023
BspMI	ACCTGC	1 cut(s)	750
BspPI	GGATC	1 cut(s)	908
BspT104I	TTCGAA	1 cut(s)	1547
BsrI	ACTGG	5 cut(s)	459, 841, 930, 1415, 1636
BssECI	CCNNGG	5 cut(s)	39, 151, 673, 970, 1164
BssMI	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
BssSI	CACGAG	1 cut(s)	1083
BssT1I	CCWWGG	3 cut(s)	39, 151, 673
Bst2BI	CACGAG	1 cut(s)	1083
Bst2UI	CCWGG	3 cut(s)	29, 972, 1346
Bst4CI	ACNGT	3 cut(s)	394, 1424, 1537
Bst6I	CTCTTC	1 cut(s)	1374
BstBAI	YACGTR	2 cut(s)	173, 335
BstBI	TTCGAA	1 cut(s)	1547
BstC8I	GCNNGC	4 cut(s)	78, 340, 1249, 1479
BstDEI	CTNAG	6 cut(s)	368, 846, 951, 1196, 1473, 1592
BstDSI	CCRYGG	2 cut(s)	151, 1164
BstEII	GGTNACC	1 cut(s)	155
BstENI	CCTNNNNNAGG	1 cut(s)	38
BstF5I	GGATG	3 cut(s)	288, 1368, 1582
BstFNI	CGCG	1 cut(s)	1166
BstKTI	GATC	5 cut(s)	721, 916, 1098, 1333, 1398
BstMAI	GTCTC	1 cut(s)	364
BstMBI	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
BstMWI	GCNNNNNNNGC	3 cut(s)	965, 1043, 1169
BstNI	CCWGG	3 cut(s)	29, 972, 1346
BstNSI	RCATGY	4 cut(s)	80, 748, 989, 1251
BstPI	GGTNACC	1 cut(s)	155
BstSCI	CCNGG	3 cut(s)	27, 970, 1344
BstSLI	GKGCMC	2 cut(s)	433, 1441
BstUI	CGCG	1 cut(s)	1166
BstV1I	GCAGC	3 cut(s)	511, 928, 931
BstV2I	GAAGAC	2 cut(s)	816, 1631
BstX2I	RGATCY	1 cut(s)	913
BstXI	CCANNNNNNTGG	1 cut(s)	937
BstYI	RGATCY	1 cut(s)	913
BsuRI	GGCC	4 cut(s)	459, 672, 1263, 1278
BtgI	CCRYGG	2 cut(s)	151, 1164
BtrI	CACGTC	1 cut(s)	1004
BtsCI	GGATG	3 cut(s)	288, 1368, 1582
BtsI	GCAGTG	1 cut(s)	433
BtsIMutI	CAGTG	4 cut(s)	433, 937, 1422, 1429
BveI	ACCTGC	1 cut(s)	750
Cac8I	GCNNGC	4 cut(s)	78, 340, 1249, 1479
CaiI	CAGNNNCTG	1 cut(s)	398
CciI	TCATGA	1 cut(s)	1023
Cfr13I	GGNCC	2 cut(s)	31, 457
Cfr42I	CCGCGG	1 cut(s)	1167
CsiI	ACCWGGT	1 cut(s)	1344
Csp6I	GTAC	2 cut(s)	734, 1211
CviQI	GTAC	2 cut(s)	734, 1211
DdeI	CTNAG	6 cut(s)	368, 846, 951, 1196, 1473, 1592
DpnI	GATC	5 cut(s)	720, 915, 1097, 1332, 1397
DpnII	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
DraI	TTTAAA	1 cut(s)	645
DraIII	CACNNNGTG	1 cut(s)	1348
EaeI	YGGCCR	2 cut(s)	670, 1276
Eam1104I	CTCTTC	1 cut(s)	1374
EarI	CTCTTC	1 cut(s)	1374
Eco130I	CCWWGG	3 cut(s)	39, 151, 673
Eco24I	GRGCYC	1 cut(s)	235
Eco47I	GGWCC	1 cut(s)	31
Eco91I	GGTNACC	1 cut(s)	155
EcoNI	CCTNNNNNAGG	1 cut(s)	38
EcoO65I	GGTNACC	1 cut(s)	155
EcoRI	GAATTC	2 cut(s)	217, 520
EcoRII	CCWGG	3 cut(s)	27, 970, 1344
EcoT14I	CCWWGG	3 cut(s)	39, 151, 673
EcoT22I	ATGCAT	4 cut(s)	265, 381, 596, 684
EcoT38I	GRGCYC	1 cut(s)	235
ErhI	CCWWGG	3 cut(s)	39, 151, 673
FaqI	GGGAC	4 cut(s)	177, 420, 505, 1093
FbaI	TGATCA	1 cut(s)	718
Fnu4HI	GCNGC	4 cut(s)	500, 942, 945, 1164
FokI	GGATG	3 cut(s)	295, 1375, 1589
FriOI	GRGCYC	1 cut(s)	235
Fsp4HI	GCNGC	4 cut(s)	500, 942, 945, 1164
FspBI	CTAG	6 cut(s)	126, 410, 569, 1076, 1265, 1323
GluI	GCNGC	4 cut(s)	500, 942, 945, 1164
GsaI	CCCAGC	1 cut(s)	198
GsuI	CTGGAG	1 cut(s)	873
HaeIII	GGCC	4 cut(s)	459, 672, 1263, 1278
HindIII	AAGCTT	1 cut(s)	1352
HphI	GGTGA	5 cut(s)	17, 167, 1334, 1360, 1574
Hpy166II	GTNNAC	6 cut(s)	46, 431, 734, 1007, 1342, 1420
Hpy188I	TCNGA	6 cut(s)	346, 954, 1018, 1292, 1395, 1519
Hpy188III	TCNNGA	5 cut(s)	60, 91, 753, 852, 1024
Hpy8I	GTNNAC	6 cut(s)	46, 431, 734, 1007, 1342, 1420
Hpy99I	CGWCG	1 cut(s)	1005
HpyAV	CCTTC	7 cut(s)	170, 356, 592, 859, 893, 901, 1604
HpyCH4III	ACNGT	3 cut(s)	394, 1424, 1537
HpyCH4IV	ACGT	3 cut(s)	172, 334, 1003
HpyF10VI	GCNNNNNNNGC	3 cut(s)	965, 1043, 1169
HpyF3I	CTNAG	6 cut(s)	368, 846, 951, 1196, 1473, 1592
HpySE526I	ACGT	3 cut(s)	172, 334, 1003
Ksp22I	TGATCA	1 cut(s)	718
KspI	CCGCGG	1 cut(s)	1167
Kzo9I	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
Lsp1109I	GCAGC	3 cut(s)	511, 928, 931
LweI	GCATC	3 cut(s)	581, 746, 1447
MabI	ACCWGGT	1 cut(s)	1344
MaeI	CTAG	6 cut(s)	126, 410, 569, 1076, 1265, 1323
MaeII	ACGT	3 cut(s)	172, 334, 1003
MaeIII	GTNAC	4 cut(s)	155, 388, 436, 814
MalI	GATC	5 cut(s)	720, 915, 1097, 1332, 1397
MboI	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
MboII	GAAGA	7 cut(s)	816, 868, 871, 989, 1120, 1391, 1636
MfeI	CAATTG	3 cut(s)	17, 71, 1616
MflI	RGATCY	1 cut(s)	913
MhlI	GDGCHC	3 cut(s)	235, 433, 1441
MlsI	TGGCCA	1 cut(s)	672
MluNI	TGGCCA	1 cut(s)	672
MlyI	GAGTC	3 cut(s)	407, 764, 1075
MmeI	TCCRAC	1 cut(s)	1356
MnlI	CCTC	6 cut(s)	1042, 1162, 1360, 1375, 1563, 1614
Mox20I	TGGCCA	1 cut(s)	672
Mph1103I	ATGCAT	4 cut(s)	265, 381, 596, 684
MscI	TGGCCA	1 cut(s)	672
MseI	TTAA	6 cut(s)	276, 644, 1092, 1133, 1185, 1647
MslI	CAYNNNNRTG	3 cut(s)	990, 1046, 1538
Msp20I	TGGCCA	1 cut(s)	672
MspA1I	CMGCKG	2 cut(s)	502, 1166
MspR9I	CCNGG	3 cut(s)	29, 972, 1346
MunI	CAATTG	3 cut(s)	17, 71, 1616
Mva1269I	GAATGC	1 cut(s)	684
MvaI	CCWGG	3 cut(s)	29, 972, 1346
MvnI	CGCG	1 cut(s)	1166
MwoI	GCNNNNNNNGC	3 cut(s)	965, 1043, 1169
NcoI	CCATGG	1 cut(s)	151
NdeII	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
NmeAIII	GCCGAG	1 cut(s)	1304
NmuCI	GTSAC	1 cut(s)	155
NsiI	ATGCAT	4 cut(s)	265, 381, 596, 684
NspI	RCATGY	4 cut(s)	80, 748, 989, 1251
NspV	TTCGAA	1 cut(s)	1547
PaeI	GCATGC	2 cut(s)	80, 1251
PagI	TCATGA	1 cut(s)	1023
PaqCI	CACCTGC	1 cut(s)	750
PctI	GAATGC	1 cut(s)	684
PfeI	GAWTC	7 cut(s)	138, 650, 710, 1013, 1220, 1469, 1580
PkrI	GCNGC	4 cut(s)	501, 943, 946, 1165
PleI	GAGTC	3 cut(s)	407, 764, 1075
PpsI	GAGTC	3 cut(s)	407, 764, 1075
Ppu21I	YACGTR	2 cut(s)	173, 335
PshBI	ATTAAT	1 cut(s)	1133
Psp6I	CCWGG	3 cut(s)	27, 970, 1344
PspEI	GGTNACC	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	194
PspGI	CCWGG	3 cut(s)	27, 970, 1344
PspPI	GGNCC	2 cut(s)	31, 457
PstNI	CAGNNNCTG	1 cut(s)	398
PsuI	RGATCY	1 cut(s)	913
PvuII	CAGCTG	1 cut(s)	502
RsaI	GTAC	2 cut(s)	735, 1212
RsaNI	GTAC	2 cut(s)	734, 1211
RseI	CAYNNNNRTG	3 cut(s)	990, 1046, 1538
SacII	CCGCGG	1 cut(s)	1167
SaqAI	TTAA	6 cut(s)	276, 644, 1092, 1133, 1185, 1647
SatI	GCNGC	4 cut(s)	500, 942, 945, 1164
Sau3AI	GATC	5 cut(s)	718, 913, 1095, 1330, 1395
Sau96I	GGNCC	2 cut(s)	31, 457
SchI	GAGTC	3 cut(s)	407, 764, 1075
ScrFI	CCNGG	3 cut(s)	29, 972, 1346
SduI	GDGCHC	3 cut(s)	235, 433, 1441
SexAI	ACCWGGT	1 cut(s)	1344
SfaNI	GCATC	3 cut(s)	581, 746, 1447
Sfr303I	CCGCGG	1 cut(s)	1167
SfuI	TTCGAA	1 cut(s)	1547
SgrBI	CCGCGG	1 cut(s)	1167
SinI	GGWCC	1 cut(s)	31
SmiMI	CAYNNNNRTG	3 cut(s)	990, 1046, 1538
SmlI	CTYRAG	1 cut(s)	240
SmoI	CTYRAG	1 cut(s)	240
SphI	GCATGC	2 cut(s)	80, 1251
SsiI	CCGC	3 cut(s)	497, 1164, 1166
SspI	AATATT	2 cut(s)	1114, 1137
SspMI	CTAG	6 cut(s)	126, 410, 569, 1076, 1265, 1323
StyD4I	CCNGG	3 cut(s)	27, 970, 1344
StyI	CCWWGG	3 cut(s)	39, 151, 673
TaaI	ACNGT	3 cut(s)	394, 1424, 1537
TaiI	ACGT	3 cut(s)	175, 337, 1006
TaqI	TCGA	5 cut(s)	183, 229, 653, 1000, 1547
TatI	WGTACW	1 cut(s)	733
TauI	GCSGC	1 cut(s)	1166
TfiI	GAWTC	7 cut(s)	138, 650, 710, 1013, 1220, 1469, 1580
Tru1I	TTAA	6 cut(s)	276, 644, 1092, 1133, 1185, 1647
Tru9I	TTAA	6 cut(s)	276, 644, 1092, 1133, 1185, 1647
TscAI	CASTG	4 cut(s)	433, 937, 1422, 1429
TseFI	GTSAC	1 cut(s)	155
TseI	GCWGC	3 cut(s)	499, 941, 944
Tsp45I	GTSAC	1 cut(s)	155
TspDTI	ATGAA	8 cut(s)	201, 476, 483, 611, 1057, 1110, 1119, 1233
TspGWI	ACGGA	1 cut(s)	1218
TspRI	CASTG	4 cut(s)	433, 937, 1422, 1429
VneI	GTGCAC	1 cut(s)	429
VpaK11BI	GGWCC	1 cut(s)	31
VspI	ATTAAT	1 cut(s)	1133
XagI	CCTNNNNNAGG	1 cut(s)	38
XapI	RAATTY	5 cut(s)	217, 251, 520, 544, 1284
XceI	RCATGY	4 cut(s)	80, 748, 989, 1251
XcmI	CCANNNNNNNNNTGG	1 cut(s)	680
XspI	CTAG	6 cut(s)	126, 410, 569, 1076, 1265, 1323
Zsp2I	ATGCAT	4 cut(s)	265, 381, 596, 684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.