HB1, ASXL, restriction endonuclease HTH domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000004399 RLG00000004400 RLG00000013638 RLG00000031636 |
| rosa_multiflora | Rmu_sc0001643.1_g000004 |
| rosa_samantha | Rh2CG322000 Rh2DG359700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 164 |
| AclWI | GGATC | 1 cut(s) | 40 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 200, 242 |
| AgsI | TTSAA | 1 cut(s) | 120 |
| AjnI | CCWGG | 1 cut(s) | 235 |
| AlwI | GGATC | 1 cut(s) | 40 |
| AoxI | GGCC | 1 cut(s) | 104 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| AsuII | TTCGAA | 1 cut(s) | 336 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BciT130I | CCWGG | 1 cut(s) | 237 |
| BciVI | GTATCC | 1 cut(s) | 163 |
| BfaI | CTAG | 2 cut(s) | 54, 206 |
| BfuI | GTATCC | 1 cut(s) | 163 |
| BglII | AGATCT | 1 cut(s) | 208 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| Bme1390I | CCNGG | 1 cut(s) | 237 |
| BmrFI | CCNGG | 1 cut(s) | 237 |
| BpmI | CTGGAG | 1 cut(s) | 258 |
| Bpu14I | TTCGAA | 1 cut(s) | 336 |
| BpuEI | CTTGAG | 2 cut(s) | 116, 172 |
| BsaBI | GATNNNNATC | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 200, 242 |
| Bse1I | ACTGG | 2 cut(s) | 205, 293 |
| Bse8I | GATNNNNATC | 1 cut(s) | 213 |
| BseBI | CCWGG | 1 cut(s) | 237 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseJI | GATNNNNATC | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 200, 242 |
| BseNI | ACTGG | 2 cut(s) | 205, 293 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 200, 242 |
| BsnI | GGCC | 1 cut(s) | 106 |
| Bsp119I | TTCGAA | 1 cut(s) | 336 |
| Bsp143I | GATC | 2 cut(s) | 45, 208 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspPI | GGATC | 1 cut(s) | 40 |
| BspT104I | TTCGAA | 1 cut(s) | 336 |
| BsrI | ACTGG | 2 cut(s) | 205, 293 |
| BssMI | GATC | 2 cut(s) | 45, 208 |
| Bst2UI | CCWGG | 1 cut(s) | 237 |
| Bst4CI | ACNGT | 1 cut(s) | 26 |
| BstBI | TTCGAA | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 2 cut(s) | 284, 288 |
| BstDEI | CTNAG | 1 cut(s) | 345 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstKTI | GATC | 2 cut(s) | 48, 211 |
| BstMBI | GATC | 2 cut(s) | 45, 208 |
| BstNI | CCWGG | 1 cut(s) | 237 |
| BstNSI | RCATGY | 1 cut(s) | 286 |
| BstSCI | CCNGG | 1 cut(s) | 235 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstX2I | RGATCY | 2 cut(s) | 45, 208 |
| BstYI | RGATCY | 2 cut(s) | 45, 208 |
| BsuI | GTATCC | 1 cut(s) | 163 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 2 cut(s) | 284, 288 |
| CviAII | CATG | 2 cut(s) | 140, 283 |
| CviJI | RGCY | 2 cut(s) | 32, 106 |
| CviKI_1 | RGCY | 2 cut(s) | 32, 106 |
| DdeI | CTNAG | 1 cut(s) | 345 |
| DpnI | GATC | 2 cut(s) | 47, 210 |
| DpnII | GATC | 2 cut(s) | 45, 208 |
| EcoRII | CCWGG | 1 cut(s) | 235 |
| FaeI | CATG | 2 cut(s) | 143, 286 |
| FaiI | YATR | 7 cut(s) | 8, 42, 103, 141, 164, 284, 313 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 178, 210 |
| FatI | CATG | 2 cut(s) | 139, 282 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| FokI | GGATG | 1 cut(s) | 234 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| FspBI | CTAG | 2 cut(s) | 54, 206 |
| GluI | GCNGC | 1 cut(s) | 228 |
| GsuI | CTGGAG | 1 cut(s) | 258 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| Hin1II | CATG | 2 cut(s) | 143, 286 |
| HinfI | GANTC | 2 cut(s) | 116, 136 |
| Hpy166II | GTNNAC | 1 cut(s) | 245 |
| Hpy188III | TCNNGA | 3 cut(s) | 54, 95, 151 |
| Hpy8I | GTNNAC | 1 cut(s) | 245 |
| HpyAV | CCTTC | 2 cut(s) | 60, 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 26 |
| HpyCH4V | TGCA | 5 cut(s) | 40, 86, 185, 282, 290 |
| HpyF3I | CTNAG | 1 cut(s) | 345 |
| Hsp92II | CATG | 2 cut(s) | 143, 286 |
| Kzo9I | GATC | 2 cut(s) | 45, 208 |
| LpnPI | CCDG | 4 cut(s) | 186, 222, 249, 306 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| MaeI | CTAG | 2 cut(s) | 54, 206 |
| MaeIII | GTNAC | 1 cut(s) | 340 |
| MalI | GATC | 2 cut(s) | 47, 210 |
| MboI | GATC | 2 cut(s) | 45, 208 |
| MboII | GAAGA | 2 cut(s) | 188, 325 |
| MflI | RGATCY | 2 cut(s) | 45, 208 |
| MluCI | AATT | 2 cut(s) | 267, 326 |
| MmeI | TCCRAC | 1 cut(s) | 241 |
| MnlI | CCTC | 2 cut(s) | 147, 233 |
| MseI | TTAA | 2 cut(s) | 15, 21 |
| MspR9I | CCNGG | 1 cut(s) | 237 |
| MvaI | CCWGG | 1 cut(s) | 237 |
| NdeII | GATC | 2 cut(s) | 45, 208 |
| NlaIII | CATG | 2 cut(s) | 143, 286 |
| NspI | RCATGY | 1 cut(s) | 286 |
| NspV | TTCGAA | 1 cut(s) | 336 |
| PaeI | GCATGC | 1 cut(s) | 286 |
| PfeI | GAWTC | 2 cut(s) | 116, 136 |
| PfoI | TCCNGGA | 1 cut(s) | 235 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PsiI | TTATAA | 1 cut(s) | 164 |
| Psp6I | CCWGG | 1 cut(s) | 235 |
| PspGI | CCWGG | 1 cut(s) | 235 |
| PsuI | RGATCY | 2 cut(s) | 45, 208 |
| SaqAI | TTAA | 2 cut(s) | 15, 21 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 2 cut(s) | 45, 208 |
| ScrFI | CCNGG | 1 cut(s) | 237 |
| SetI | ASST | 5 cut(s) | 63, 125, 158, 196, 244 |
| SfuI | TTCGAA | 1 cut(s) | 336 |
| SmlI | CTYRAG | 2 cut(s) | 95, 151 |
| SmoI | CTYRAG | 2 cut(s) | 95, 151 |
| SphI | GCATGC | 1 cut(s) | 286 |
| Sse9I | AATT | 2 cut(s) | 267, 326 |
| SspMI | CTAG | 2 cut(s) | 54, 206 |
| StyD4I | CCNGG | 1 cut(s) | 235 |
| TaaI | ACNGT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 336 |
| TasI | AATT | 2 cut(s) | 267, 326 |
| TfiI | GAWTC | 2 cut(s) | 116, 136 |
| Tru1I | TTAA | 2 cut(s) | 15, 21 |
| Tru9I | TTAA | 2 cut(s) | 15, 21 |
| TseI | GCWGC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 1 cut(s) | 128 |
| TspGWI | ACGGA | 1 cut(s) | 188 |
| XbaI | TCTAGA | 1 cut(s) | 53 |
| XceI | RCATGY | 1 cut(s) | 286 |
| XspI | CTAG | 2 cut(s) | 54, 206 |