RLG00000005360

conserved protein UCP031088, alpha beta hydrolase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
67062580 .. 67065237
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005360

Sequence Viewer

Length: 1365 bp
ATGTCGTTTCTCGTTCCCGGTTCCGATCTCCGTTCCCTCGCCACCGCTTTCGGTACTGACCGTTACTACTTCAGCCCAGTCAGGTGCCCCGAACCGCTTCGCGTCTCAGCCCGCCGCAGCCCCGCTAACGGCGTAGCCTTGGGTTTGGACAAGAGAAACGACCCGCGGTGGTCGGTTTGTACCGCCGACGAGCTTCACTTCGTCTCTGTTCCCGATTCCGACTGGAACCTCGCTCTCTGGCGCTACCTTCCCTCTCCTCAGAGCGAGCCCAGGAATCATCCGCTGTTACTGTTGTCGGGGGTCGCCACAAATGCTATTGGATTCGATCTCTCCCCTGAGTTCTCCTTTGCGCGCTCCATGTCGGCGCAAGGATATGATACCTGGATTCTTGAAGTTAGAGGTGCTGGGTTGAGCACACATGGAACCGACTCAGGGGAAGTAAATGGTTTGTTAGAAGCAGGAAAAAACCGTGCTGCACAGATTAGGGGTTTAAGTCAAACGCCATTGAACATCATGGAAGTAGGTCAACGAGCGGTTACAAGTTTTGCAGACTTCCAAGAGCGTTTTTCAACTACATTGGTAGATTTCCAGAAGCAACTTGATCTTGTCGCAAAGCTTGATTGGGACTTTGATCACTACTTGGAAGAGGATGTGCCTGTTGCGATGGAGTATATAAGAACTCAATGCAAACCAGAGGATGGGAAGCTTCTCGCAATTGGTCACTCGATGGGGGGTATCTTGCTATATGCAATGCTCTCACGATGCTCTTCTCAAGGACGAGATTCTGGATTCGCATCAGTTGTTACTTTGGGGTCATCACTTGACTACAGGCCTTCAAAATCATCACTGAAATTGTTTTTACCTCTGGCAAACCCTGCTCAGGTGGTAAATGTTCCTGTTCCGTTCGGTGCAATATATACTGCTGTGCATCATCTTGTGAGTGGTACTCCAGTTTTGTCTTGGTTAAAACCTCAAGTTTCTGCTCAAGACCTGATGGATCCAGAGTTGTATGAAAAACTTATCTTAAATAACTTTGGTACTGTCCCTGCTAAGCTTCTCTTGCAGCTAGCAACAGTCTTCCAGGAGGGTGGTTTACAGGACAGGAGTGGGACTTTCTTTTACAAGGAACATCTATGCAAAAGCAATGTCCCAATCTTGGCCCTTGGAGGAGATCAAGACCTAATATGTCCTCCTGAAGCCGTTTATGAAACAGTGAAGGTAATTCCTGAGGAATTGGTTACCTTCAAAGTTCTTGGAGAACTCAGCGGTCCTCATTATGCACACTACGATTTAGTTGGAGGTCGCGGGGCAGCAGGTGTGTATCCACACATTATTGAGTTTCTCAATCGTCATGACAGGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

49.88

Weight (kDa)

5.57

Isoelectric Point (pI)

50.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010669)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 1304
AccB1I GGYRCC 1 cut(s) 84
AccB7I CCANNNNNTGG 1 cut(s) 698
AccBSI CCGCTC 1 cut(s) 533
AccII CGCG 4 cut(s) 102, 166, 352, 1305
AclWI GGATC 2 cut(s) 992, 1005
AcuI CTGAAG 2 cut(s) 55, 1215
AfaI GTAC 4 cut(s) 55, 181, 946, 1039
AfiI CCNNNNNNNGG 5 cut(s) 128, 432, 698, 880, 1156
AgsI TTSAA 5 cut(s) 392, 508, 570, 837, 1246
AjnI CCWGG 3 cut(s) 269, 380, 1080
AluBI AGCT 5 cut(s) 193, 616, 706, 1054, 1066
AluI AGCT 5 cut(s) 193, 616, 706, 1054, 1066
Alw21I GWGCWC 1 cut(s) 416
Alw26I GTCTC 2 cut(s) 109, 208
AlwI GGATC 2 cut(s) 992, 1005
AoxI GGCC 2 cut(s) 830, 1158
ApeKI GCWGC 4 cut(s) 117, 473, 1063, 1310
ArsI GACNNNNNNTTYG 2 cut(s) 1131, 1163
Asp700I GAANNNNTTC 1 cut(s) 96
AspLEI GCGC 4 cut(s) 243, 352, 354, 367
AspS9I GGNCC 2 cut(s) 1159, 1268
AsuC2I CCSGG 1 cut(s) 18
AsuNHI GCTAGC 1 cut(s) 1066
AvaII GGWCC 1 cut(s) 1268
AxyI CCTNAGG 1 cut(s) 1227
BaeGI GKGCMC 1 cut(s) 89
BaeI ACNNNNGTAYC 2 cut(s) 936, 969
BamHI GGATCC 1 cut(s) 997
BanI GGYRCC 1 cut(s) 84
BanII GRGCYC 1 cut(s) 270
BbsI GAAGAC 1 cut(s) 1069
Bbv12I GWGCWC 1 cut(s) 416
BbvI GCAGC 4 cut(s) 129, 460, 1075, 1322
BccI CCATC 4 cut(s) 658, 692, 721, 988
BceAI ACGGC 2 cut(s) 145, 1184
BciT130I CCWGG 3 cut(s) 271, 382, 1082
BciVI GTATCC 1 cut(s) 1332
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 1 cut(s) 18
BcoDI GTCTC 2 cut(s) 109, 208
BfaI CTAG 1 cut(s) 1067
BfmI CTRYAG 1 cut(s) 826
BfoI RGCGCY 1 cut(s) 244
BfuAI ACCTGC 1 cut(s) 1304
BfuI GTATCC 1 cut(s) 1332
BisI GCNGC 5 cut(s) 115, 118, 474, 1064, 1311
BlpI GCTNAGC 1 cut(s) 1050
BlsI GCNGC 5 cut(s) 116, 119, 475, 1065, 1312
Bme1390I CCNGG 4 cut(s) 18, 271, 382, 1082
Bme18I GGWCC 1 cut(s) 1268
BmgT120I GGNCC 2 cut(s) 1159, 1268
BmiI GGNNCC 5 cut(s) 22, 86, 227, 424, 999
BmrFI CCNGG 4 cut(s) 18, 271, 382, 1082
BmrI ACTGGG 1 cut(s) 71
BmsI GCATC 3 cut(s) 752, 803, 937
BmtI GCTAGC 1 cut(s) 1070
BmuI ACTGGG 1 cut(s) 71
BpiI GAAGAC 1 cut(s) 1069
BplI GAGNNNNNCTC 2 cut(s) 931, 963
BpmI CTGGAG 1 cut(s) 933
Bpu10I CCTNAGC 1 cut(s) 879
Bpu1102I GCTNAGC 1 cut(s) 1050
BpuEI CTTGAG 3 cut(s) 756, 957, 969
BpuMI CCSGG 1 cut(s) 18
BsaBI GATNNNNATC 1 cut(s) 793
BsaJI CCNNGG 4 cut(s) 138, 164, 269, 1162
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 432, 698, 880, 1156
Bse1I ACTGG 3 cut(s) 77, 227, 950
Bse21I CCTNAGG 1 cut(s) 1227
Bse3DI GCAATG 2 cut(s) 756, 1150
Bse8I GATNNNNATC 1 cut(s) 793
BseBI CCWGG 3 cut(s) 271, 382, 1082
BseDI CCNNGG 4 cut(s) 138, 164, 269, 1162
BseGI GGATG 3 cut(s) 277, 655, 703
BseJI GATNNNNATC 1 cut(s) 793
BseLI CCNNNNNNNGG 5 cut(s) 128, 432, 698, 880, 1156
BseMI GCAATG 2 cut(s) 756, 1150
BseMII CTCAG 7 cut(s) 120, 272, 327, 444, 893, 1218, 1276
BseNI ACTGG 3 cut(s) 77, 227, 950
BsePI GCGCGC 1 cut(s) 350
BseRI GAGGAG 2 cut(s) 246, 1182
BseSI GKGCMC 1 cut(s) 89
BseXI GCAGC 4 cut(s) 129, 460, 1075, 1322
BseYI CCCAGC 1 cut(s) 404
BsgI GTGCAG 1 cut(s) 459
Bsh1236I CGCG 4 cut(s) 102, 166, 352, 1305
BshFI GGCC 2 cut(s) 832, 1160
BshNI GGYRCC 1 cut(s) 84
BsiHKAI GWGCWC 1 cut(s) 416
BsiSI CCGG 1 cut(s) 18
BslFI GGGAC 4 cut(s) 638, 1028, 1123, 1133
BslI CCNNNNNNNGG 5 cut(s) 128, 432, 698, 880, 1156
BsmAI GTCTC 2 cut(s) 109, 208
BsmBI CGTCTC 2 cut(s) 109, 208
BsmFI GGGAC 4 cut(s) 638, 1028, 1123, 1133
BsnI GGCC 2 cut(s) 832, 1160
Bsp1286I GDGCHC 3 cut(s) 89, 270, 416
Bsp143I GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
Bsp1720I GCTNAGC 1 cut(s) 1050
BspANI GGCC 2 cut(s) 832, 1160
BspCNI CTCAG 7 cut(s) 119, 271, 328, 443, 892, 1219, 1275
BspFNI CGCG 4 cut(s) 102, 166, 352, 1305
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 5 cut(s) 22, 86, 227, 424, 999
BspMI ACCTGC 1 cut(s) 1304
BspOI GCTAGC 1 cut(s) 1070
BspPI GGATC 2 cut(s) 992, 1005
BspQI GCTCTTC 1 cut(s) 772
BspT107I GGYRCC 1 cut(s) 84
BsrBI CCGCTC 1 cut(s) 533
BsrDI GCAATG 2 cut(s) 756, 1150
BsrI ACTGG 3 cut(s) 77, 227, 950
BssECI CCNNGG 4 cut(s) 138, 164, 269, 1162
BssHII GCGCGC 1 cut(s) 350
BssMI GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
BssT1I CCWWGG 2 cut(s) 138, 1162
Bst2UI CCWGG 3 cut(s) 271, 382, 1082
Bst4CI ACNGT 6 cut(s) 62, 291, 470, 1042, 1075, 1213
Bst6I CTCTTC 2 cut(s) 639, 772
BstAPI GCANNNNNTGC 1 cut(s) 875
BstC8I GCNNGC 4 cut(s) 112, 266, 352, 1068
BstDEI CTNAG 8 cut(s) 106, 258, 336, 430, 879, 1050, 1227, 1262
BstDSI CCRYGG 1 cut(s) 164
BstEII GGTNACC 1 cut(s) 1237
BstF5I GGATG 3 cut(s) 277, 655, 703
BstFNI CGCG 4 cut(s) 102, 166, 352, 1305
BstH2I RGCGCY 1 cut(s) 244
BstHHI GCGC 4 cut(s) 243, 352, 354, 367
BstKTI GATC 6 cut(s) 28, 328, 604, 634, 1000, 1174
BstMAI GTCTC 2 cut(s) 109, 208
BstMBI GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
BstMWI GCNNNNNNNGC 3 cut(s) 311, 875, 1060
BstNI CCWGG 3 cut(s) 271, 382, 1082
BstPI GGTNACC 1 cut(s) 1237
BstSCI CCNGG 4 cut(s) 16, 269, 380, 1080
BstSFI CTRYAG 1 cut(s) 826
BstSLI GKGCMC 1 cut(s) 89
BstUI CGCG 4 cut(s) 102, 166, 352, 1305
BstV1I GCAGC 4 cut(s) 129, 460, 1075, 1322
BstV2I GAAGAC 1 cut(s) 1069
BstX2I RGATCY 1 cut(s) 997
BstXI CCANNNNNNTGG 1 cut(s) 1088
BstYI RGATCY 1 cut(s) 997
Bsu36I CCTNAGG 1 cut(s) 1227
BsuI GTATCC 1 cut(s) 1332
BsuRI GGCC 2 cut(s) 832, 1160
BtgI CCRYGG 1 cut(s) 164
BtgZI GCGATG 1 cut(s) 677
BtsCI GGATG 3 cut(s) 277, 655, 703
BtsIMutI CAGTG 2 cut(s) 845, 1218
BveI ACCTGC 1 cut(s) 1304
Cac8I GCNNGC 4 cut(s) 112, 266, 352, 1068
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 4 cut(s) 243, 352, 354, 367
Cfr13I GGNCC 2 cut(s) 1159, 1268
Cfr42I CCGCGG 1 cut(s) 167
CseI GACGC 1 cut(s) 91
Csp6I GTAC 4 cut(s) 54, 180, 945, 1038
CviAII CATG 4 cut(s) 358, 419, 514, 1352
CviQI GTAC 4 cut(s) 54, 180, 945, 1038
DdeI CTNAG 8 cut(s) 106, 258, 336, 430, 879, 1050, 1227, 1262
DpnI GATC 6 cut(s) 27, 327, 603, 633, 999, 1173
DpnII GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
Eam1104I CTCTTC 2 cut(s) 639, 772
EarI CTCTTC 2 cut(s) 639, 772
Eco130I CCWWGG 2 cut(s) 138, 1162
Eco147I AGGCCT 1 cut(s) 832
Eco24I GRGCYC 1 cut(s) 270
Eco47I GGWCC 1 cut(s) 1268
Eco57I CTGAAG 2 cut(s) 55, 1215
Eco81I CCTNAGG 1 cut(s) 1227
Eco91I GGTNACC 1 cut(s) 1237
EcoO65I GGTNACC 1 cut(s) 1237
EcoRII CCWGG 3 cut(s) 269, 380, 1080
EcoT14I CCWWGG 2 cut(s) 138, 1162
EcoT38I GRGCYC 1 cut(s) 270
ErhI CCWWGG 2 cut(s) 138, 1162
Esp3I CGTCTC 2 cut(s) 109, 208
FaeI CATG 4 cut(s) 361, 422, 517, 1355
FalI AAGNNNNNCTT 2 cut(s) 1043, 1075
FaqI GGGAC 4 cut(s) 638, 1028, 1123, 1133
FatI CATG 4 cut(s) 357, 418, 513, 1351
FauI CCCGC 4 cut(s) 119, 130, 171, 1298
FbaI TGATCA 1 cut(s) 631
Fnu4HI GCNGC 5 cut(s) 115, 118, 474, 1064, 1311
FokI GGATG 3 cut(s) 264, 662, 710
FriOI GRGCYC 1 cut(s) 270
Fsp4HI GCNGC 5 cut(s) 115, 118, 474, 1064, 1311
FspBI CTAG 1 cut(s) 1067
GlaI GCGC 4 cut(s) 242, 351, 353, 366
GluI GCNGC 5 cut(s) 115, 118, 474, 1064, 1311
GsaI CCCAGC 1 cut(s) 408
GsuI CTGGAG 1 cut(s) 933
HaeII RGCGCY 1 cut(s) 244
HaeIII GGCC 2 cut(s) 832, 1160
HapII CCGG 1 cut(s) 18
HgaI GACGC 1 cut(s) 91
HhaI GCGC 4 cut(s) 243, 352, 354, 367
Hin1II CATG 4 cut(s) 361, 422, 517, 1355
Hin6I GCGC 4 cut(s) 241, 350, 352, 365
HinP1I GCGC 4 cut(s) 241, 350, 352, 365
HincII GTYRAC 1 cut(s) 527
HindII GTYRAC 1 cut(s) 527
HindIII AAGCTT 3 cut(s) 614, 704, 1052
HinfI GANTC 7 cut(s) 215, 274, 321, 385, 428, 782, 789
HpaII CCGG 1 cut(s) 18
Hpy166II GTNNAC 2 cut(s) 527, 1094
Hpy188I TCNGA 3 cut(s) 25, 220, 261
Hpy8I GTNNAC 2 cut(s) 527, 1094
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 4 cut(s) 257, 843, 1210, 1252
HpyCH4III ACNGT 6 cut(s) 62, 291, 470, 1042, 1075, 1213
HpyCH4V TGCA 9 cut(s) 476, 548, 687, 749, 911, 928, 1063, 1137, 1280
HpyF10VI GCNNNNNNNGC 3 cut(s) 311, 875, 1060
HpyF3I CTNAG 8 cut(s) 106, 258, 336, 430, 879, 1050, 1227, 1262
Hsp92II CATG 4 cut(s) 361, 422, 517, 1355
HspAI GCGC 4 cut(s) 241, 350, 352, 365
Ksp22I TGATCA 1 cut(s) 631
KspI CCGCGG 1 cut(s) 167
Kzo9I GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
LguI GCTCTTC 1 cut(s) 772
LmnI GCTCC 1 cut(s) 359
Lsp1109I GCAGC 4 cut(s) 129, 460, 1075, 1322
LweI GCATC 3 cut(s) 752, 803, 937
MaeI CTAG 1 cut(s) 1067
MaeIII GTNAC 6 cut(s) 62, 285, 535, 719, 802, 1237
MalI GATC 6 cut(s) 27, 327, 603, 633, 999, 1173
MbiI CCGCTC 1 cut(s) 533
MboI GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
MboII GAAGA 3 cut(s) 656, 759, 1069
MfeI CAATTG 1 cut(s) 714
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 3 cut(s) 89, 270, 416
MluCI AATT 4 cut(s) 714, 851, 1221, 1232
MlyI GAGTC 1 cut(s) 422
MmeI TCCRAC 2 cut(s) 243, 1276
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 3 cut(s) 491, 965, 1025
MspA1I CMGCKG 3 cut(s) 166, 283, 1266
MspI CCGG 1 cut(s) 18
MspR9I CCNGG 4 cut(s) 18, 271, 382, 1082
MunI CAATTG 1 cut(s) 714
MvaI CCWGG 3 cut(s) 271, 382, 1082
MvnI CGCG 4 cut(s) 102, 166, 352, 1305
MwoI GCNNNNNNNGC 3 cut(s) 311, 875, 1060
NciI CCSGG 1 cut(s) 18
NdeII GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
NheI GCTAGC 1 cut(s) 1066
NlaIII CATG 4 cut(s) 361, 422, 517, 1355
NlaIV GGNNCC 5 cut(s) 22, 86, 227, 424, 999
NmuCI GTSAC 1 cut(s) 719
PagI TCATGA 1 cut(s) 1351
PaqCI CACCTGC 1 cut(s) 1304
PauI GCGCGC 1 cut(s) 350
PceI AGGCCT 1 cut(s) 832
PciSI GCTCTTC 1 cut(s) 772
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 6 cut(s) 215, 274, 321, 385, 782, 789
PflMI CCANNNNNTGG 1 cut(s) 698
PfoI TCCNGGA 1 cut(s) 1080
PkrI GCNGC 5 cut(s) 116, 119, 475, 1065, 1312
PleI GAGTC 1 cut(s) 422
PpsI GAGTC 1 cut(s) 422
Psp6I CCWGG 3 cut(s) 269, 380, 1080
PspEI GGTNACC 1 cut(s) 1237
PspFI CCCAGC 1 cut(s) 404
PspGI CCWGG 3 cut(s) 269, 380, 1080
PspN4I GGNNCC 5 cut(s) 22, 86, 227, 424, 999
PspPI GGNCC 2 cut(s) 1159, 1268
PsuI RGATCY 1 cut(s) 997
PteI GCGCGC 1 cut(s) 350
RsaI GTAC 4 cut(s) 55, 181, 946, 1039
RsaNI GTAC 4 cut(s) 54, 180, 945, 1038
SacII CCGCGG 1 cut(s) 167
SapI GCTCTTC 1 cut(s) 772
SaqAI TTAA 3 cut(s) 491, 965, 1025
SatI GCNGC 5 cut(s) 115, 118, 474, 1064, 1311
Sau3AI GATC 6 cut(s) 25, 325, 601, 631, 997, 1171
Sau96I GGNCC 2 cut(s) 1159, 1268
SchI GAGTC 1 cut(s) 422
ScrFI CCNGG 4 cut(s) 18, 271, 382, 1082
SduI GDGCHC 3 cut(s) 89, 270, 416
SfaNI GCATC 3 cut(s) 752, 803, 937
SfcI CTRYAG 1 cut(s) 826
Sfr303I CCGCGG 1 cut(s) 167
SgrBI CCGCGG 1 cut(s) 167
SinI GGWCC 1 cut(s) 1268
SmlI CTYRAG 3 cut(s) 771, 972, 984
SmoI CTYRAG 3 cut(s) 771, 972, 984
Sse9I AATT 4 cut(s) 714, 851, 1221, 1232
SseBI AGGCCT 1 cut(s) 832
SspMI CTAG 1 cut(s) 1067
StuI AGGCCT 1 cut(s) 832
StyD4I CCNGG 4 cut(s) 16, 269, 380, 1080
StyI CCWWGG 2 cut(s) 138, 1162
TaaI ACNGT 6 cut(s) 62, 291, 470, 1042, 1075, 1213
TaqI TCGA 2 cut(s) 324, 725
TasI AATT 4 cut(s) 714, 851, 1221, 1232
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 6 cut(s) 215, 274, 321, 385, 782, 789
Tru1I TTAA 3 cut(s) 491, 965, 1025
Tru9I TTAA 3 cut(s) 491, 965, 1025
TscAI CASTG 2 cut(s) 852, 1218
TseFI GTSAC 1 cut(s) 719
TseI GCWGC 4 cut(s) 117, 473, 1063, 1310
Tsp45I GTSAC 1 cut(s) 719
TspDTI ATGAA 2 cut(s) 1026, 1221
TspGWI ACGGA 2 cut(s) 20, 891
TspRI CASTG 2 cut(s) 852, 1218
Van91I CCANNNNNTGG 1 cut(s) 698
VpaK11BI GGWCC 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 1 cut(s) 957
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 1 cut(s) 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.