Rmu_sc0002581.1_g000004

Glycosyltransferase family 28 N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002581.1
OG0010669
Physical Location & Seq
Reverse (-)
13715 .. 21456
7742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002581.1_g000004.1.cds

Sequence Viewer

Length: 2631 bp
atggccgtcaccgccggcttcggtcacctctctttcgtccccaagttcccatcaacccaagtcaggacctttgacttcaagatcacctcctgtctctctctgaggcaatcaaatgacccaactctcgcctcccaaaacgacgccgtcccgttcggcagcctccgtgtagtcttcgccaccggtggcaccggcggccacatatacccggccgtcgccatagccgacgagctcaaaagcacagaccccaacgcccagattttgtttcttggcatacccaaaagcatggaaagcaaggccgtccccaacgccggctacgacttcgccgccgtcccctccgccaagttgcaccgcccgattttgtcacccagaaacgtgtttcttccctactacttgatcaagtcaataatatggagctactttaaattgagggagtttgatcctcatgttgtgatcggaaccggcgggtatgtgtcttttccggtaggcattgcggcggtgctcagaggagtgcagcttgtgattcaagaacagaatgctgttcccggaatagccaattgggtgctttcttttttagctgatgctgtgtttgtggcttttaattctactattgattgtttcccaagtgggagtggcaagtgtgtggtgtgtgggaatccggtgaggtcgttcttaaggcagaatgtgtctaaggcggtggcgagggggcggttttttcctaagtctggtgagatgggagaggaggaggtggagaaggtgaaggtgcttttggtgcttggagggtctttaggtgctaatgccgtgaacattgctatgctgaatttgtattatcagatgctgttggagaaggaggacttgttcatcatttggcagactggagtggaggcctataatgagatggagagccttgttaagaaccatccgcggctccttttgaagccgttcatgcataaaatggatctggcatatgcagctgcagacctaatagtttcgcgagctggtgcaatgacttgtgatgagatcttggcaactgggaagccttccattctgataccatcaccagatgttgctgaaggatatcaattcaaaaatgcttctttgatggcagacttggcaggtgcaagggttataactgaagatgaacttgattcgacaacccttggaaatgcaattgaagagatattaggggatgaaagtaaaatggcagatatgtccgagaaggctctgaaagctgcaaactccaatgcctctgtaatccagcttccacgctccattgcagtccaccaaaggggtcggtctctcttctttcctgcactcattctcgttctctcaaccttgcgaagcccagtcaggtgccccgaaccgctccgcgtctcctcccgccgcagccccgctaacggcgtatccttgggtttggacaagagaaacgacccgcggtggtcggtttgtaccgccgacgagcttcacttcgtctctgttcccgattccgactggaacctcgctctctggcgctaccttccctctcctcagagcgagccgaggaatcatccgctgttactgttgtcaggggtcgccacaaatgctattggattcgatctctcccctgagttctcctttgcgcgctccatgtcggcgcaaggttatgatacctggattcttgaagtcagaggtgctgggttgagcacacatggaaccgactcgggggaagtaaatggtttgttagaagcagggcaaaaccatgctacacagattgggggtttaagtcaaacaccattcaacatcgtggaagtaggtcaacgagcggttacaagttttgcagacttccaagagcgtttttcaactacattagaagatttgcagaagcaacttgatcttgtcgcaaagcttgattgggactttgatcaccacttggaagaggatgtgcctgttgcgatggagtatataagaactgaatgcaaaccagaggatgggaagcttctcgcgattggacactcgatggggggtatcttgctatatgcaatgctctcacgatgctcttctcaaggacaagattctggattcgcatcagttgttactttggggtcatcacttgactacaggccttcaaaatcatcactgaaattgtttttacctctggcagaccctgctcaggtggtaaatgttcctgttccgttcggcgcaatatatactgctgtgcatcatcttgtgagtggtactccagttttgtcttggtttaaacctcaagtttctgctcaagacctgatggatccagagttatatgaaaagcttatcttaaacaactttggtactgtccctgctaagcttctcttgcagctagcaacagtcttccaggagggtggtttacgtgacaggagtgggactttcttttacaaggaacatctatgcaaaagcaatgtcccaatcttggcccttggaggagatcaagacctaatatgtcctcctgaagccgtttatgaaacagtgaaggtaattcctgagcaattggttaccttcaaagttcttggagaacttggcggtcctcattatgcacactacgatttggttggaggtcgcggggcagcaggagtgtatccacacattattgagtttctcaatcgtcatgacagggcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00550 ko01100 ko01502 ko04112 map00550 map01100 map01502 map04112
Pfam Domains
Protein Families
Glyco_tran_28_C Glyco_transf_28

Protein Analysis

876

Amino Acids

95.37

Weight (kDa)

5.71

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010669)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73750 AT1G73750
fragaria_vesca FvH4_5g16710 FvH4_5g16710 FvH4_5g16710
malus_domestica MD06G1220800.v1.1
prunus_persica Prupe.5G225200_v2.0.a1 Prupe.5G225200_v2.0.a1
pyrus_communis pycom06g19670
rosa_chinensis RchiOBHm_Chr7g0179391
rosa_laevigata RLG00000005360
rosa_multiflora Rmu_sc0002581.1_g000004 Rmu_sc0019996.1_g000001
rosa_roxburghii Rroxscaffold_3G00274070
rosa_rugosa Rorug06G0424000
rosa_samantha Rh7AG023400 Rh7BG023000 Rh7CG024400 Rh7DG023900
rosa_wichuraiana Rw7G001890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1127
AarI CACCTGC 1 cut(s) 1103
Acc36I ACCTGC 1 cut(s) 1103
AccB1I GGYRCC 2 cut(s) 185, 1350
AccB7I CCANNNNNTGG 1 cut(s) 1964
AccBSI CCGCTC 2 cut(s) 1363, 1799
AccII CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
AclWI GGATC 4 cut(s) 431, 963, 2258, 2271
AcoI YGGCCR 3 cut(s) 3, 193, 207
AcsI RAATTY 1 cut(s) 817
AcuI CTGAAG 3 cut(s) 1089, 1152, 2481
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 3 cut(s) 1447, 2212, 2305
AfiI CCNNNNNNNGG 9 cut(s) 63, 308, 722, 1285, 1394, 1698, 1964, 2146, 2422
AflII CTTAAG 1 cut(s) 670
AflIII ACRYGT 1 cut(s) 372
AgeI ACCGGT 1 cut(s) 179
AjnI CCWGG 2 cut(s) 1646, 2346
AjuI GAANNNNNNNTTGG 4 cut(s) 538, 570, 749, 781
AloI GAACNNNNNNTCC 2 cut(s) 839, 871
Alw21I GWGCWC 3 cut(s) 231, 501, 1682
Alw26I GTCTC 4 cut(s) 98, 1299, 1375, 1474
AlwI GGATC 4 cut(s) 431, 963, 2258, 2271
AlwNI CAGNNNCTG 2 cut(s) 835, 2141
Ama87I CYCGRG 1 cut(s) 1696
AoxI GGCC 7 cut(s) 3, 193, 207, 294, 882, 2096, 2424
ApeKI GCWGC 8 cut(s) 156, 511, 968, 971, 1229, 1383, 2329, 2576
ApoI RAATTY 1 cut(s) 817
ArsI GACNNNNNNTTYG 2 cut(s) 2397, 2429
AsiGI ACCGGT 1 cut(s) 179
Asp700I GAANNNNTTC 1 cut(s) 938
AspLEI GCGC 5 cut(s) 1509, 1618, 1620, 1633, 2177
AspS9I GGNCC 3 cut(s) 66, 2425, 2534
AsuC2I CCSGG 2 cut(s) 206, 543
AsuHPI GGTGA 8 cut(s) 17, 76, 354, 670, 737, 766, 1047, 1892
AsuNHI GCTAGC 1 cut(s) 2332
AvaI CYCGRG 1 cut(s) 1696
AvaII GGWCC 2 cut(s) 66, 2534
BaeGI GKGCMC 1 cut(s) 1355
BaeI ACNNNNGTAYC 2 cut(s) 2202, 2235
BamHI GGATCC 1 cut(s) 2263
BanI GGYRCC 2 cut(s) 185, 1350
BanII GRGCYC 1 cut(s) 231
BarI GAAGNNNNNNTAC 2 cut(s) 1242, 1274
BbsI GAAGAC 2 cut(s) 163, 2335
Bbv12I GWGCWC 3 cut(s) 231, 501, 1682
BbvI GCAGC 8 cut(s) 168, 523, 958, 980, 1216, 1395, 2341, 2588
BceAI ACGGC 8 cut(s) 128, 194, 281, 311, 782, 922, 1411, 2450
BciT130I CCWGG 2 cut(s) 1648, 2348
BciVI GTATCC 2 cut(s) 1411, 2598
BclI TGATCA 2 cut(s) 393, 1897
BcnI CCSGG 2 cut(s) 206, 543
BcoDI GTCTC 4 cut(s) 98, 1299, 1375, 1474
BfaI CTAG 1 cut(s) 2333
BfmI CTRYAG 2 cut(s) 972, 2092
BfoI RGCGCY 1 cut(s) 1510
BfrI CTTAAG 1 cut(s) 670
BfuAI ACCTGC 1 cut(s) 1103
BfuI GTATCC 2 cut(s) 1411, 2598
BglII AGATCT 1 cut(s) 1017
BlpI GCTNAGC 1 cut(s) 2316
Bme1390I CCNGG 4 cut(s) 206, 543, 1648, 2348
Bme18I GGWCC 2 cut(s) 66, 2534
BmeT110I CYCGRG 1 cut(s) 1696
BmgT120I GGNCC 3 cut(s) 66, 2425, 2534
BmiI GGNNCC 7 cut(s) 187, 457, 926, 1352, 1493, 1690, 2265
BmrFI CCNGG 4 cut(s) 206, 543, 1648, 2348
BmrI ACTGGG 2 cut(s) 1038, 1337
BmsI GCATC 5 cut(s) 568, 822, 2018, 2069, 2203
BmtI GCTAGC 1 cut(s) 2336
BmuI ACTGGG 2 cut(s) 1038, 1337
BpiI GAAGAC 2 cut(s) 163, 2335
BplI GAGNNNNNCTC 2 cut(s) 2197, 2229
BpmI CTGGAG 2 cut(s) 894, 2199
Bpu10I CCTNAGC 2 cut(s) 2145, 2493
Bpu1102I GCTNAGC 1 cut(s) 2316
BpuEI CTTGAG 3 cut(s) 2022, 2223, 2235
BpuMI CCSGG 2 cut(s) 206, 543
BsaAI YACGTR 1 cut(s) 2363
BsaBI GATNNNNATC 1 cut(s) 2059
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 1299
BsaJI CCNNGG 6 cut(s) 920, 1156, 1404, 1430, 1535, 2428
BsaWI WCCGGW 3 cut(s) 179, 478, 655
BsaXI ACNNNNNCTCC 2 cut(s) 839, 869
Bsc4I CCNNNNNNNGG 9 cut(s) 63, 308, 722, 1285, 1394, 1698, 1964, 2146, 2422
Bse118I RCCGGY 5 cut(s) 14, 179, 188, 308, 458
Bse1I ACTGG 5 cut(s) 877, 1033, 1343, 1493, 2216
Bse3DI GCAATG 6 cut(s) 486, 804, 1008, 1269, 2022, 2416
Bse8I GATNNNNATC 1 cut(s) 2059
BseBI CCWGG 2 cut(s) 1648, 2348
BseDI CCNNGG 6 cut(s) 920, 1156, 1404, 1430, 1535, 2428
BseGI GGATG 5 cut(s) 916, 1192, 1543, 1921, 1969
BseJI GATNNNNATC 1 cut(s) 2059
BseLI CCNNNNNNNGG 9 cut(s) 63, 308, 722, 1285, 1394, 1698, 1964, 2146, 2422
BseMI GCAATG 6 cut(s) 486, 804, 1008, 1269, 2022, 2416
BseMII CTCAG 6 cut(s) 92, 514, 1538, 1593, 2159, 2484
BseNI ACTGG 5 cut(s) 877, 1033, 1343, 1493, 2216
BsePI GCGCGC 1 cut(s) 1616
BseRI GAGGAG 6 cut(s) 519, 752, 755, 1363, 1512, 2448
BseSI GKGCMC 1 cut(s) 1355
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 8 cut(s) 168, 523, 958, 980, 1216, 1395, 2341, 2588
BseYI CCCAGC 1 cut(s) 1670
BsgI GTGCAG 2 cut(s) 530, 1293
Bsh1236I CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 7 cut(s) 5, 195, 209, 296, 884, 2098, 2426
BshNI GGYRCC 2 cut(s) 185, 1350
BshTI ACCGGT 1 cut(s) 179
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 3 cut(s) 231, 501, 1682
BsiHKCI CYCGRG 1 cut(s) 1696
BsiSI CCGG 9 cut(s) 15, 180, 189, 206, 309, 459, 479, 543, 656
BslFI GGGAC 8 cut(s) 23, 131, 284, 314, 1904, 2294, 2389, 2399
BslI CCNNNNNNNGG 9 cut(s) 63, 308, 722, 1285, 1394, 1698, 1964, 2146, 2422
BsmAI GTCTC 4 cut(s) 98, 1299, 1375, 1474
BsmBI CGTCTC 2 cut(s) 1375, 1474
BsmFI GGGAC 8 cut(s) 23, 131, 284, 314, 1904, 2294, 2389, 2399
BsmI GAATGC 2 cut(s) 538, 1955
BsnI GGCC 7 cut(s) 5, 195, 209, 296, 884, 2098, 2426
Bso31I GGTCTC 1 cut(s) 1299
BsoBI CYCGRG 1 cut(s) 1696
Bsp1286I GDGCHC 4 cut(s) 231, 501, 1355, 1682
Bsp1720I GCTNAGC 1 cut(s) 2316
Bsp68I TCGCGA 2 cut(s) 991, 1979
BspANI GGCC 7 cut(s) 5, 195, 209, 296, 884, 2098, 2426
BspCNI CTCAG 6 cut(s) 93, 513, 1537, 1594, 2158, 2485
BspFNI CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
BspHI TCATGA 1 cut(s) 2617
BspLI GGNNCC 7 cut(s) 187, 457, 926, 1352, 1493, 1690, 2265
BspMAI CTGCAG 1 cut(s) 976
BspMI ACCTGC 1 cut(s) 1103
BspOI GCTAGC 1 cut(s) 2336
BspPI GGATC 4 cut(s) 431, 963, 2258, 2271
BspQI GCTCTTC 1 cut(s) 2038
BspT107I GGYRCC 2 cut(s) 185, 1350
BspTI CTTAAG 1 cut(s) 670
BspTNI GGTCTC 1 cut(s) 1299
BsrBI CCGCTC 2 cut(s) 1363, 1799
BsrDI GCAATG 6 cut(s) 486, 804, 1008, 1269, 2022, 2416
BsrFI RCCGGY 5 cut(s) 14, 179, 188, 308, 458
BsrI ACTGG 5 cut(s) 877, 1033, 1343, 1493, 2216
BssAI RCCGGY 5 cut(s) 14, 179, 188, 308, 458
BssECI CCNNGG 6 cut(s) 920, 1156, 1404, 1430, 1535, 2428
BssHII GCGCGC 1 cut(s) 1616
BssNI GRCGYC 1 cut(s) 141
BssT1I CCWWGG 3 cut(s) 1156, 1404, 2428
Bst2UI CCWGG 2 cut(s) 1648, 2348
Bst4CI ACNGT 4 cut(s) 1557, 2308, 2341, 2479
Bst6I CTCTTC 4 cut(s) 1167, 1304, 1905, 2038
BstACI GRCGYC 1 cut(s) 141
BstAFI CTTAAG 1 cut(s) 670
BstAPI GCANNNNNTGC 1 cut(s) 2141
BstBAI YACGTR 1 cut(s) 2363
BstC8I GCNNGC 6 cut(s) 16, 310, 993, 1532, 1618, 2334
BstDEI CTNAG 9 cut(s) 101, 500, 687, 717, 1524, 1602, 2145, 2316, 2493
BstDSI CCRYGG 2 cut(s) 920, 1430
BstEII GGTNACC 2 cut(s) 23, 2503
BstF5I GGATG 5 cut(s) 916, 1192, 1543, 1921, 1969
BstFNI CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
BstH2I RGCGCY 1 cut(s) 1510
BstHHI GCGC 5 cut(s) 1509, 1618, 1620, 1633, 2177
BstMAI GTCTC 4 cut(s) 98, 1299, 1375, 1474
BstMCI CGRYCG 1 cut(s) 210
BstNI CCWGG 2 cut(s) 1648, 2348
BstPI GGTNACC 2 cut(s) 23, 2503
BstSCI CCNGG 4 cut(s) 204, 541, 1646, 2346
BstSFI CTRYAG 2 cut(s) 972, 2092
BstSLI GKGCMC 1 cut(s) 1355
BstUI CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
BstV1I GCAGC 8 cut(s) 168, 523, 958, 980, 1216, 1395, 2341, 2588
BstV2I GAAGAC 2 cut(s) 163, 2335
BstX2I RGATCY 3 cut(s) 955, 1017, 2263
BstXI CCANNNNNNTGG 2 cut(s) 283, 2354
BstYI RGATCY 3 cut(s) 955, 1017, 2263
BstZI CGGCCG 1 cut(s) 207
BsuI GTATCC 2 cut(s) 1411, 2598
BsuRI GGCC 7 cut(s) 5, 195, 209, 296, 884, 2098, 2426
BtgI CCRYGG 2 cut(s) 920, 1430
BtgZI GCGATG 1 cut(s) 1943
BtsCI GGATG 5 cut(s) 916, 1192, 1543, 1921, 1969
BtsIMutI CAGTG 2 cut(s) 2111, 2484
BtuMI TCGCGA 2 cut(s) 991, 1979
BveI ACCTGC 1 cut(s) 1103
Cac8I GCNNGC 6 cut(s) 16, 310, 993, 1532, 1618, 2334
CaiI CAGNNNCTG 2 cut(s) 835, 2141
CciI TCATGA 1 cut(s) 2617
CfoI GCGC 5 cut(s) 1509, 1618, 1620, 1633, 2177
Cfr10I RCCGGY 5 cut(s) 14, 179, 188, 308, 458
Cfr13I GGNCC 3 cut(s) 66, 2425, 2534
Cfr42I CCGCGG 2 cut(s) 923, 1433
CseI GACGC 2 cut(s) 149, 1357
Csp6I GTAC 3 cut(s) 1446, 2211, 2304
CspAI ACCGGT 1 cut(s) 179
CviAII CATG 7 cut(s) 283, 443, 943, 1624, 1685, 1736, 2618
CviQI GTAC 3 cut(s) 1446, 2211, 2304
DdeI CTNAG 9 cut(s) 101, 500, 687, 717, 1524, 1602, 2145, 2316, 2493
DraI TTTAAA 2 cut(s) 421, 2233
EaeI YGGCCR 3 cut(s) 3, 193, 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 4 cut(s) 1167, 1304, 1905, 2038
EarI CTCTTC 4 cut(s) 1167, 1304, 1905, 2038
EciI GGCGGA 1 cut(s) 325
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 3 cut(s) 1156, 1404, 2428
Eco147I AGGCCT 2 cut(s) 884, 2098
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 1299
Eco32I GATATC 1 cut(s) 1076
Eco47I GGWCC 2 cut(s) 66, 2534
Eco52I CGGCCG 1 cut(s) 207
Eco53kI GAGCTC 1 cut(s) 229
Eco57I CTGAAG 3 cut(s) 1089, 1152, 2481
Eco88I CYCGRG 1 cut(s) 1696
Eco91I GGTNACC 2 cut(s) 23, 2503
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 66
EcoO65I GGTNACC 2 cut(s) 23, 2503
EcoRII CCWGG 2 cut(s) 1646, 2346
EcoRV GATATC 1 cut(s) 1076
EcoT14I CCWWGG 3 cut(s) 1156, 1404, 2428
EcoT22I ATGCAT 1 cut(s) 948
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 3 cut(s) 1156, 1404, 2428
Esp3I CGTCTC 2 cut(s) 1375, 1474
FaeI CATG 7 cut(s) 286, 446, 946, 1627, 1688, 1739, 2621
FalI AAGNNNNNCTT 8 cut(s) 836, 868, 1125, 1157, 2273, 2305, 2309, 2341
FaqI GGGAC 8 cut(s) 23, 131, 284, 314, 1904, 2294, 2389, 2399
FatI CATG 7 cut(s) 282, 442, 942, 1623, 1684, 1735, 2617
FauI CCCGC 5 cut(s) 455, 1385, 1396, 1437, 2564
FauNDI CATATG 1 cut(s) 964
FbaI TGATCA 2 cut(s) 393, 1897
FokI GGATG 5 cut(s) 903, 1199, 1530, 1928, 1976
FriOI GRGCYC 1 cut(s) 231
FspBI CTAG 1 cut(s) 2333
GlaI GCGC 5 cut(s) 1508, 1617, 1619, 1632, 2176
GsaI CCCAGC 1 cut(s) 1674
GsuI CTGGAG 2 cut(s) 894, 2199
HaeII RGCGCY 1 cut(s) 1510
HaeIII GGCC 7 cut(s) 5, 195, 209, 296, 884, 2098, 2426
HapII CCGG 9 cut(s) 15, 180, 189, 206, 309, 459, 479, 543, 656
HgaI GACGC 2 cut(s) 149, 1357
HhaI GCGC 5 cut(s) 1509, 1618, 1620, 1633, 2177
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 7 cut(s) 286, 446, 946, 1627, 1688, 1739, 2621
Hin6I GCGC 5 cut(s) 1507, 1616, 1618, 1631, 2175
HinP1I GCGC 5 cut(s) 1507, 1616, 1618, 1631, 2175
HincII GTYRAC 1 cut(s) 1793
HindII GTYRAC 1 cut(s) 1793
HindIII AAGCTT 4 cut(s) 1880, 1970, 2282, 2318
HpaII CCGG 9 cut(s) 15, 180, 189, 206, 309, 459, 479, 543, 656
HphI GGTGA 8 cut(s) 17, 76, 354, 670, 737, 766, 1047, 1892
Hpy166II GTNNAC 4 cut(s) 802, 1279, 1793, 2360
Hpy8I GTNNAC 4 cut(s) 802, 1279, 1793, 2360
Hpy99I CGWCG 4 cut(s) 143, 215, 227, 1457
HpyCH4III ACNGT 4 cut(s) 1557, 2308, 2341, 2479
HpyCH4IV ACGT 2 cut(s) 372, 2362
HpyF3I CTNAG 9 cut(s) 101, 500, 687, 717, 1524, 1602, 2145, 2316, 2493
HpySE526I ACGT 2 cut(s) 372, 2362
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 7 cut(s) 286, 446, 946, 1627, 1688, 1739, 2621
HspAI GCGC 5 cut(s) 1507, 1616, 1618, 1631, 2175
KroI GCCGGC 2 cut(s) 14, 308
KroNI GCCGGC 2 cut(s) 16, 310
Ksp22I TGATCA 2 cut(s) 393, 1897
KspI CCGCGG 2 cut(s) 923, 1433
LguI GCTCTTC 1 cut(s) 2038
LmnI GCTCC 5 cut(s) 411, 930, 1271, 1368, 1625
Lsp1109I GCAGC 8 cut(s) 168, 523, 958, 980, 1216, 1395, 2341, 2588
LweI GCATC 5 cut(s) 568, 822, 2018, 2069, 2203
MaeI CTAG 1 cut(s) 2333
MaeII ACGT 2 cut(s) 372, 2362
MaeIII GTNAC 8 cut(s) 7, 23, 360, 1551, 1801, 2068, 2363, 2503
MbiI CCGCTC 2 cut(s) 1363, 1799
MboII GAAGA 9 cut(s) 163, 371, 1145, 1184, 1291, 1859, 1922, 2025, 2335
MfeI CAATTG 3 cut(s) 553, 1167, 2498
MflI RGATCY 3 cut(s) 955, 1017, 2263
MhlI GDGCHC 4 cut(s) 231, 501, 1355, 1682
MluCI AATT 9 cut(s) 422, 553, 598, 817, 1079, 1167, 2117, 2487, 2498
MlyI GAGTC 1 cut(s) 1688
MmeI TCCRAC 3 cut(s) 819, 1509, 2542
Mph1103I ATGCAT 1 cut(s) 948
MroNI GCCGGC 2 cut(s) 14, 308
MroXI GAANNNNTTC 1 cut(s) 938
MseI TTAA 7 cut(s) 420, 597, 671, 909, 1757, 2232, 2291
MslI CAYNNNNRTG 1 cut(s) 809
MspA1I CMGCKG 4 cut(s) 922, 971, 1432, 1549
MspCI CTTAAG 1 cut(s) 670
MspI CCGG 9 cut(s) 15, 180, 189, 206, 309, 459, 479, 543, 656
MspR9I CCNGG 4 cut(s) 206, 543, 1648, 2348
MssI GTTTAAAC 1 cut(s) 2233
MunI CAATTG 3 cut(s) 553, 1167, 2498
Mva1269I GAATGC 2 cut(s) 538, 1955
MvaI CCWGG 2 cut(s) 1648, 2348
MvnI CGCG 7 cut(s) 922, 991, 1368, 1432, 1618, 1979, 2571
NaeI GCCGGC 2 cut(s) 16, 310
NciI CCSGG 2 cut(s) 206, 543
NdeI CATATG 1 cut(s) 964
NgoMIV GCCGGC 2 cut(s) 14, 308
NheI GCTAGC 1 cut(s) 2332
NlaIII CATG 7 cut(s) 286, 446, 946, 1627, 1688, 1739, 2621
NlaIV GGNNCC 7 cut(s) 187, 457, 926, 1352, 1493, 1690, 2265
NmeAIII GCCGAG 1 cut(s) 1560
NmuCI GTSAC 4 cut(s) 7, 23, 360, 2363
NruI TCGCGA 2 cut(s) 991, 1979
NsiI ATGCAT 1 cut(s) 948
PagI TCATGA 1 cut(s) 2617
PaqCI CACCTGC 1 cut(s) 1103
PauI GCGCGC 1 cut(s) 1616
PceI AGGCCT 2 cut(s) 884, 2098
PciSI GCTCTTC 1 cut(s) 2038
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 312
PctI GAATGC 2 cut(s) 538, 1955
PdiI GCCGGC 2 cut(s) 16, 310
PdmI GAANNNNTTC 1 cut(s) 938
PfeI GAWTC 9 cut(s) 520, 652, 1145, 1481, 1540, 1587, 1651, 2048, 2055
PflFI GACNNNGTC 1 cut(s) 143
PflMI CCANNNNNTGG 1 cut(s) 1964
PfoI TCCNGGA 2 cut(s) 541, 2346
PinAI ACCGGT 1 cut(s) 179
PleI GAGTC 1 cut(s) 1688
PmeI GTTTAAAC 1 cut(s) 2233
PpsI GAGTC 1 cut(s) 1688
Ppu21I YACGTR 1 cut(s) 2363
PpuMI RGGWCCY 1 cut(s) 66
PsiI TTATAA 1 cut(s) 1127
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 2 cut(s) 1646, 2346
PspEI GGTNACC 2 cut(s) 23, 2503
PspFI CCCAGC 1 cut(s) 1670
PspGI CCWGG 2 cut(s) 1646, 2346
PspN4I GGNNCC 7 cut(s) 187, 457, 926, 1352, 1493, 1690, 2265
PspPI GGNCC 3 cut(s) 66, 2425, 2534
PspPPI RGGWCCY 1 cut(s) 66
PstI CTGCAG 1 cut(s) 976
PstNI CAGNNNCTG 2 cut(s) 835, 2141
PsuI RGATCY 3 cut(s) 955, 1017, 2263
PsyI GACNNNGTC 1 cut(s) 143
PteI GCGCGC 1 cut(s) 1616
PvuII CAGCTG 1 cut(s) 971
RruI TCGCGA 2 cut(s) 991, 1979
RsaI GTAC 3 cut(s) 1447, 2212, 2305
RsaNI GTAC 3 cut(s) 1446, 2211, 2304
RseI CAYNNNNRTG 1 cut(s) 809
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 2 cut(s) 923, 1433
SapI GCTCTTC 1 cut(s) 2038
SaqAI TTAA 7 cut(s) 420, 597, 671, 909, 1757, 2232, 2291
Sau96I GGNCC 3 cut(s) 66, 2425, 2534
SchI GAGTC 1 cut(s) 1688
ScrFI CCNGG 4 cut(s) 206, 543, 1648, 2348
SduI GDGCHC 4 cut(s) 231, 501, 1355, 1682
SfaNI GCATC 5 cut(s) 568, 822, 2018, 2069, 2203
SfcI CTRYAG 2 cut(s) 972, 2092
Sfr303I CCGCGG 2 cut(s) 923, 1433
SgrAI CRCCGGYG 2 cut(s) 179, 188
SgrBI CCGCGG 2 cut(s) 923, 1433
SinI GGWCC 2 cut(s) 66, 2534
SmiMI CAYNNNNRTG 1 cut(s) 809
SmlI CTYRAG 4 cut(s) 670, 2037, 2238, 2250
SmoI CTYRAG 4 cut(s) 670, 2037, 2238, 2250
Sse9I AATT 9 cut(s) 422, 553, 598, 817, 1079, 1167, 2117, 2487, 2498
SseBI AGGCCT 2 cut(s) 884, 2098
SspMI CTAG 1 cut(s) 2333
SstI GAGCTC 1 cut(s) 231
StuI AGGCCT 2 cut(s) 884, 2098
StyD4I CCNGG 4 cut(s) 204, 541, 1646, 2346
StyI CCWWGG 3 cut(s) 1156, 1404, 2428
TaaI ACNGT 4 cut(s) 1557, 2308, 2341, 2479
TaiI ACGT 2 cut(s) 375, 2365
TaqI TCGA 3 cut(s) 1148, 1590, 1991
TaqII GACCGA 2 cut(s) 11, 1281
TasI AATT 9 cut(s) 422, 553, 598, 817, 1079, 1167, 2117, 2487, 2498
TauI GCSGC 5 cut(s) 195, 326, 494, 925, 1383
TfiI GAWTC 9 cut(s) 520, 652, 1145, 1481, 1540, 1587, 1651, 2048, 2055
Tru1I TTAA 7 cut(s) 420, 597, 671, 909, 1757, 2232, 2291
Tru9I TTAA 7 cut(s) 420, 597, 671, 909, 1757, 2232, 2291
TscAI CASTG 2 cut(s) 2118, 2484
TseFI GTSAC 4 cut(s) 7, 23, 360, 2363
TseI GCWGC 8 cut(s) 156, 511, 968, 971, 1229, 1383, 2329, 2576
Tsp45I GTSAC 4 cut(s) 7, 23, 360, 2363
TspDTI ATGAA 6 cut(s) 847, 931, 1152, 1203, 2292, 2487
TspGWI ACGGA 2 cut(s) 152, 2157
TspRI CASTG 2 cut(s) 2118, 2484
Tth111I GACNNNGTC 1 cut(s) 143
Van91I CCANNNNNTGG 1 cut(s) 1964
Vha464I CTTAAG 1 cut(s) 670
VpaK11BI GGWCC 2 cut(s) 66, 2534
XapI RAATTY 1 cut(s) 817
XcmI CCANNNNNNNNNTGG 1 cut(s) 2223
XmnI GAANNNNTTC 1 cut(s) 938
XspI CTAG 1 cut(s) 2333
Zsp2I ATGCAT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.