Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007433

Physical Location & Seq

Genomic Coordinates Reverse (-)

33893382 .. 33900098

Gene Structure 6717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008641

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGGCACCTCTGCGCTTAACAAGAGAAAGGGAGCAAAACCCCAAAAGGCTTCGCCCAAGAAGAAGCAAAAGAAGGAGCCTTTCACCGCCAAAAACCCAAAGAAGCCCAAGATTGTTCAAGTTCCCGAACCTTCTGACGAAGAAGAAGATGAAGAAGTAGAGGACCTTGAAGAGTTTGATGTAGGAGATGAGGAAGGATCTGGTTCAGATAGTGACACTGATATTTTTGGTGGCGATGATCCCCTCCAAGATGATGATGATGATGACGACTCCCTCCCAGGAAGTGATGAAGATGAAGAGAAAGGTTCTTCAGATTTGGATTCGGATTCCGACTCGGGTGATATAGAGAAGAAATCAAGGCTCATTGACAAAAAAACGCTGGAGGAAGAAGAAGAAGGTAGAAAGGAACTGGAATTAAATATCAAGGATGAATCTGATGAGTTCAGATTACCAACTAAGCAGGAACTCGAACAAGAGGCGCATCAACCTCCTGATCTTTCACACCTTCAGAGGAGGATAAAAGAGATTGTTCGAGTGCTCTCAAATTTCAAGGCATTGAGGCAAGAGGGGGCGTCAAGGAAGGATTATGTTGAACAGCTTAAGAGAGATTTAAGCTCATACTATGGCTACAATGACTTTTTGATTGGAGCTTTAGTAGAGATGTTTCCAGTTGTGGAACTTGTGGAGCTCATTGAAGCTTTTGAAAAGCCTCGACCCATATGCCTCCGAACTAACACTCTAAAGACACGGAGGAGGGATTTGGCAGCTAGTTTGATAAACAGAGGAGTAAACTTAGATCCCTTAAGCAAGTGGTCAAAAGTTGGACTGGTTGTGTATGAATCACAAGTCCCAGTTGGTGCCACTCCTGAATATATGGCTGGTTATTACATGCTCCAAAGTGCAAGCTCCTTTTTGCCTGTAATGGCCCTTGCTCCTCAAGAAAATGAACGAGTTGTTGATATGGCGGCTGCTCCTGGTGGTAAAACAACCTATGTAGCGGCTCTTATGAAAAATAGTGGAATTATATTTGCAAATGAAATGAAGGAGCCAAGGCTCAAGTCCCTCACTGCTAATTTGCATCGTATGGGGGTGACAAACACAGTCGTTTGCAACTATGACGGCAAGGAGCTCCCTAAGGTTCTGGGTAGCAATGCGGTTGATAGAGTTCTGTTAGATGCTCCTTGCAGCGGGACAGGGGTTATATCCAAAGATGAGTCTGTTAAAACTTCTAAAAGTTCGGATGAAATACAGAAATGTGCTCATCTCCAGAAGCAACTGATACTAGCTGCAATTGACATGGTGGATGCAAATTCGAAATCAGGGGGATACATTGTGTACTCCACGTGTTCCATTATGGTTGCTGAGAATGAAGCTGTTATTGACTATGCACTCAGGAAAAGAAATGTTAAACTTGTTCCCTGCGGACTTGACTTTGGGCGTCCAGGGTTTACCCGGTTTAGGGAACAGCGCTTCCACCCATCAGTGGAAAAGACGAGGCGGTTCTACCCTCATGTTCATAATATGGATGGTTTTTTTGTGGCGAAGCTGAAAAAGATGAGCAATTTGAAGCCAACTACAGCAGAATCTCGACTATCTGAAACAGTAGAGGCTGAAAGAGTAGACATAGATCTCAACATGACAGAAGACGACAGTGAAAAGAATGCCAGAGTAGATGTTCTGCAGCATTCGGCAGATGTGGACACAGAAAGTGAAAAGAAGGTTTTGGAAGATGGGAAACCAGCATTGGCAGGCACTGGGAAAAAGAGGAAAGAAAAGAAGCTCCCCTCCTTTTTCTCTCATCTGAAAGGGCAATTCCCCTTGGATCAAAAAGATGAAAAGAAAGTGAAATCCTCGGACCAAAAAAAGGAAAAGAGAGTGAAACTGAAATTTCCCCCTAGGGAGGAGATTGCAAAAGCCAGAATTAGTGGCCTGTATATTAGTATTGAACAGAATCTGTCTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0000154 GO:0000470 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008169 GO:0008173 GO:0008284 GO:0008649 GO:0008757 GO:0009383 GO:0009451 GO:0009966 GO:0009987 GO:0010467 GO:0010646 GO:0016043 GO:0016070 GO:0016072 GO:0016434 GO:0016740 GO:0016741 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0031167 GO:0031974 GO:0031981 GO:0032259 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042127 GO:0042254 GO:0042255 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0065003 GO:0065007 GO:0070013 GO:0070475 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360 GO:1901796 GO:1902531

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F Methyltr_RsmF_N

Protein Analysis

655

Amino Acids

73.29

Weight (kDa)

5.36

Isoelectric Point (pI)

47.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RsmF-B_ferredox	PF22458	212 - 278	8.8e-06	Methyltr_RsmF/B-like, ferredoxin-like domain
Methyltr_RsmF_N	PF17125	226 - 301	1.5e-06	N-terminal domain of 16S rRNA methyltransferase RsmF
Methyltr_RsmB-F	PF01189	307 - 517	1.9e-71	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600
fragaria_vesca	FvH4_4g11570 FvH4_4g11570
malus_domestica	MD04G1044800.v1.1
prunus_persica	Prupe.8G036800_v2.0.a1 Prupe.8G036800_v2.0.a1
pyrus_communis	pycom04g03850
rosa_chinensis	RchiOBHm_Chr4g0408681
rosa_laevigata	RLG00000008641 RLG00000008644
rosa_multiflora	Rmu_sc0002856.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353050
rosa_rugosa	Rorug04G0086600
rosa_samantha	Rh4BG148300 Rh4CG159000 Rh4DG143900
rosa_wichuraiana	Rw4G012220 Rw4G012360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	5, 857
AccI	GTMKAC	1 cut(s)	1620
AciI	CCGC	7 cut(s)	87, 965, 998, 1154, 1188, 1422, 1498
AclWI	GGATC	4 cut(s)	205, 233, 791, 1830
AcsI	RAATTY	3 cut(s)	544, 1309, 1886
AcuI	CTGAAG	2 cut(s)	294, 491
AcvI	CACGTG	1 cut(s)	1344
AcyI	GRCGYC	2 cut(s)	572, 1438
AfaI	GTAC	1 cut(s)	1337
AfeI	AGCGCT	1 cut(s)	1469
AfiI	CCNNNNNNNGG	6 cut(s)	1187, 1458, 1459, 1483, 1864, 1900
AflII	CTTAAG	2 cut(s)	599, 802
AflIII	ACRYGT	1 cut(s)	1343
AgsI	TTSAA	8 cut(s)	119, 170, 550, 593, 695, 704, 1567, 1946
AjnI	CCWGG	3 cut(s)	277, 973, 1441
AjuI	GAANNNNNNNTTGG	2 cut(s)	1727, 1759
AloI	GAACNNNNNNTCC	2 cut(s)	1455, 1487
Alw21I	GWGCWC	4 cut(s)	540, 690, 1131, 1261
AlwI	GGATC	4 cut(s)	205, 233, 791, 1830
AlwNI	CAGNNNCTG	2 cut(s)	1754, 1954
Ama87I	CYCGRG	1 cut(s)	334
Aor51HI	AGCGCT	1 cut(s)	1469
AoxI	GGCC	2 cut(s)	924, 1927
ApeKI	GCWGC	5 cut(s)	764, 968, 1185, 1286, 1681
ApoI	RAATTY	3 cut(s)	544, 1309, 1886
AspA2I	CCTAGG	1 cut(s)	1895
AspLEI	GCGC	3 cut(s)	16, 481, 1470
AspS9I	GGNCC	3 cut(s)	163, 925, 1855
AsuC2I	CCSGG	1 cut(s)	1453
AsuHPI	GGTGA	3 cut(s)	76, 350, 1102
AsuII	TTCGAA	1 cut(s)	1313
AvaI	CYCGRG	1 cut(s)	334
AvaII	GGWCC	2 cut(s)	163, 1855
AvrII	CCTAGG	1 cut(s)	1895
AxyI	CCTNAGG	1 cut(s)	1134
BaeGI	GKGCMC	1 cut(s)	8
BanI	GGYRCC	2 cut(s)	5, 857
BanII	GRGCYC	2 cut(s)	690, 1131
BbrPI	CACGTG	1 cut(s)	1344
BbsI	GAAGAC	1 cut(s)	1650
Bbv12I	GWGCWC	4 cut(s)	540, 690, 1131, 1261
BbvI	GCAGC	5 cut(s)	776, 955, 1197, 1273, 1693
BccI	CCATC	3 cut(s)	1486, 1520, 1724
BceAI	ACGGC	1 cut(s)	1135
BcgI	CGANNNNNNTGC	2 cut(s)	702, 736
BciT130I	CCWGG	3 cut(s)	279, 975, 1443
BciVI	GTATCC	1 cut(s)	1319
BcnI	CCSGG	1 cut(s)	1453
BfaI	CTAG	3 cut(s)	768, 1283, 1896
BfmI	CTRYAG	2 cut(s)	1575, 1679
BfoI	RGCGCY	1 cut(s)	1471
BfrI	CTTAAG	2 cut(s)	599, 802
BfuI	GTATCC	1 cut(s)	1319
BglII	AGATCT	1 cut(s)	1627
BisI	GCNGC	7 cut(s)	765, 966, 969, 999, 1186, 1287, 1682
BlnI	CCTAGG	1 cut(s)	1895
BlsI	GCNGC	7 cut(s)	766, 967, 970, 1000, 1187, 1288, 1683
Bme1390I	CCNGG	4 cut(s)	279, 975, 1443, 1453
Bme18I	GGWCC	2 cut(s)	163, 1855
BmeT110I	CYCGRG	1 cut(s)	334
BmgT120I	GGNCC	3 cut(s)	163, 925, 1855
BmiI	GGNNCC	4 cut(s)	7, 78, 859, 1047
BmrFI	CCNGG	4 cut(s)	279, 975, 1443, 1453
BmrI	ACTGGG	2 cut(s)	845, 1764
BmsI	GCATC	4 cut(s)	490, 1087, 1165, 1294
BmuI	ACTGGG	2 cut(s)	845, 1764
BpiI	GAAGAC	1 cut(s)	1650
BpmI	CTGGAG	2 cut(s)	401, 1250
Bpu14I	TTCGAA	1 cut(s)	1313
BpuEI	CTTGAG	2 cut(s)	921, 1040
BpuMI	CCSGG	1 cut(s)	1453
BsaAI	YACGTR	1 cut(s)	1344
BsaHI	GRCGYC	2 cut(s)	572, 1438
BsaJI	CCNNGG	6 cut(s)	277, 1049, 1442, 1818, 1851, 1895
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	6 cut(s)	1187, 1458, 1459, 1483, 1864, 1900
Bse1I	ACTGG	5 cut(s)	414, 668, 831, 851, 1759
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	1 cut(s)	1156
BseBI	CCWGG	3 cut(s)	279, 975, 1443
BseDI	CCNNGG	6 cut(s)	277, 1049, 1442, 1818, 1851, 1895
BseGI	GGATG	4 cut(s)	433, 1246, 1309, 1531
BseLI	CCNNNNNNNGG	6 cut(s)	1187, 1458, 1459, 1483, 1864, 1900
BseMI	GCAATG	1 cut(s)	1156
BseMII	CTCAG	2 cut(s)	1353, 1405
BseNI	ACTGG	5 cut(s)	414, 668, 831, 851, 1759
BseRI	GAGGAG	5 cut(s)	526, 766, 798, 924, 1916
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	5 cut(s)	776, 955, 1197, 1273, 1693
BshFI	GGCC	2 cut(s)	926, 1929
BshNI	GGYRCC	2 cut(s)	5, 857
BsiHKAI	GWGCWC	4 cut(s)	540, 690, 1131, 1261
BsiHKCI	CYCGRG	1 cut(s)	334
BsiSI	CCGG	1 cut(s)	1453
BslFI	GGGAC	3 cut(s)	833, 1045, 1204
BslI	CCNNNNNNNGG	6 cut(s)	1187, 1458, 1459, 1483, 1864, 1900
BsmFI	GGGAC	3 cut(s)	833, 1045, 1204
BsmI	GAATGC	2 cut(s)	1666, 1684
BsnI	GGCC	2 cut(s)	926, 1929
BsoBI	CYCGRG	1 cut(s)	334
Bsp119I	TTCGAA	1 cut(s)	1313
Bsp1286I	GDGCHC	5 cut(s)	8, 540, 690, 1131, 1261
Bsp143I	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
BspACI	CCGC	7 cut(s)	87, 965, 998, 1154, 1188, 1422, 1498
BspANI	GGCC	2 cut(s)	926, 1929
BspCNI	CTCAG	2 cut(s)	1354, 1404
BspLI	GGNNCC	4 cut(s)	7, 78, 859, 1047
BspMAI	CTGCAG	1 cut(s)	1683
BspPI	GGATC	4 cut(s)	205, 233, 791, 1830
BspT104I	TTCGAA	1 cut(s)	1313
BspT107I	GGYRCC	2 cut(s)	5, 857
BspTI	CTTAAG	2 cut(s)	599, 802
BsrDI	GCAATG	1 cut(s)	1156
BsrI	ACTGG	5 cut(s)	414, 668, 831, 851, 1759
BssECI	CCNNGG	6 cut(s)	277, 1049, 1442, 1818, 1851, 1895
BssMI	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
BssNI	GRCGYC	2 cut(s)	572, 1438
BssT1I	CCWWGG	3 cut(s)	1049, 1818, 1895
Bst2UI	CCWGG	3 cut(s)	279, 975, 1443
Bst4CI	ACNGT	3 cut(s)	1102, 1603, 1652
Bst6I	CTCTTC	2 cut(s)	165, 291
BstACI	GRCGYC	2 cut(s)	572, 1438
BstAFI	CTTAAG	2 cut(s)	599, 802
BstBAI	YACGTR	1 cut(s)	1344
BstBI	TTCGAA	1 cut(s)	1313
BstC8I	GCNNGC	2 cut(s)	904, 1750
BstDEI	CTNAG	5 cut(s)	456, 793, 1134, 1362, 1391
BstF5I	GGATG	4 cut(s)	433, 1246, 1309, 1531
BstH2I	RGCGCY	1 cut(s)	1471
BstHHI	GCGC	3 cut(s)	16, 481, 1470
BstKTI	GATC	6 cut(s)	200, 241, 496, 799, 1630, 1825
BstMBI	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
BstNI	CCWGG	3 cut(s)	279, 975, 1443
BstNSI	RCATGY	1 cut(s)	892
BstSCI	CCNGG	4 cut(s)	277, 973, 1441, 1451
BstSFI	CTRYAG	2 cut(s)	1575, 1679
BstSLI	GKGCMC	1 cut(s)	8
BstV1I	GCAGC	5 cut(s)	776, 955, 1197, 1273, 1693
BstV2I	GAAGAC	1 cut(s)	1650
BstX2I	RGATCY	3 cut(s)	197, 796, 1627
BstYI	RGATCY	3 cut(s)	197, 796, 1627
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	1319
BsuRI	GGCC	2 cut(s)	926, 1929
BtgZI	GCGATG	1 cut(s)	249
BtsCI	GGATG	4 cut(s)	433, 1246, 1309, 1531
BtsI	GCAGTG	1 cut(s)	1065
BtsIMutI	CAGTG	5 cut(s)	216, 1065, 1488, 1657, 1752
Cac8I	GCNNGC	2 cut(s)	904, 1750
CaiI	CAGNNNCTG	2 cut(s)	1754, 1954
CfoI	GCGC	3 cut(s)	16, 481, 1470
Cfr13I	GGNCC	3 cut(s)	163, 925, 1855
CseI	GACGC	2 cut(s)	561, 1427
Csp6I	GTAC	1 cut(s)	1336
CviAII	CATG	4 cut(s)	889, 1297, 1511, 1636
CviQI	GTAC	1 cut(s)	1336
DdeI	CTNAG	5 cut(s)	456, 793, 1134, 1362, 1391
DpnI	GATC	6 cut(s)	199, 240, 495, 798, 1629, 1824
DpnII	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
Eam1104I	CTCTTC	2 cut(s)	165, 291
EarI	CTCTTC	2 cut(s)	165, 291
Ecl136II	GAGCTC	2 cut(s)	688, 1129
Eco130I	CCWWGG	3 cut(s)	1049, 1818, 1895
Eco24I	GRGCYC	2 cut(s)	690, 1131
Eco47I	GGWCC	2 cut(s)	163, 1855
Eco47III	AGCGCT	1 cut(s)	1469
Eco53kI	GAGCTC	2 cut(s)	688, 1129
Eco57I	CTGAAG	2 cut(s)	294, 491
Eco72I	CACGTG	1 cut(s)	1344
Eco81I	CCTNAGG	1 cut(s)	1134
Eco88I	CYCGRG	1 cut(s)	334
EcoICRI	GAGCTC	2 cut(s)	688, 1129
EcoO109I	RGGNCCY	1 cut(s)	163
EcoRII	CCWGG	3 cut(s)	277, 973, 1441
EcoT14I	CCWWGG	3 cut(s)	1049, 1818, 1895
EcoT38I	GRGCYC	2 cut(s)	690, 1131
ErhI	CCWWGG	3 cut(s)	1049, 1818, 1895
FaeI	CATG	4 cut(s)	892, 1300, 1514, 1639
FaqI	GGGAC	3 cut(s)	833, 1045, 1204
FatI	CATG	4 cut(s)	888, 1296, 1510, 1635
FauI	CCCGC	1 cut(s)	1181
FauNDI	CATATG	1 cut(s)	719
FblI	GTMKAC	1 cut(s)	1620
Fnu4HI	GCNGC	7 cut(s)	765, 966, 969, 999, 1186, 1287, 1682
FokI	GGATG	4 cut(s)	440, 1253, 1316, 1538
FriOI	GRGCYC	2 cut(s)	690, 1131
Fsp4HI	GCNGC	7 cut(s)	765, 966, 969, 999, 1186, 1287, 1682
FspBI	CTAG	3 cut(s)	768, 1283, 1896
GlaI	GCGC	3 cut(s)	15, 480, 1469
GluI	GCNGC	7 cut(s)	765, 966, 969, 999, 1186, 1287, 1682
GsuI	CTGGAG	2 cut(s)	401, 1250
HaeII	RGCGCY	1 cut(s)	1471
HaeIII	GGCC	2 cut(s)	926, 1929
HapII	CCGG	1 cut(s)	1453
HgaI	GACGC	2 cut(s)	561, 1427
HhaI	GCGC	3 cut(s)	16, 481, 1470
Hin1I	GRCGYC	2 cut(s)	572, 1438
Hin1II	CATG	4 cut(s)	892, 1300, 1514, 1639
Hin6I	GCGC	3 cut(s)	14, 479, 1468
HinP1I	GCGC	3 cut(s)	14, 479, 1468
HindIII	AAGCTT	1 cut(s)	696
HinfI	GANTC	9 cut(s)	269, 320, 326, 332, 431, 839, 1214, 1583, 1951
HpaII	CCGG	1 cut(s)	1453
HphI	GGTGA	3 cut(s)	76, 350, 1102
Hpy166II	GTNNAC	5 cut(s)	790, 1336, 1449, 1621, 1699
Hpy188III	TCNNGA	7 cut(s)	125, 491, 866, 938, 1267, 1393, 1587
Hpy8I	GTNNAC	5 cut(s)	790, 1336, 1449, 1621, 1699
HpyAV	CCTTC	8 cut(s)	67, 141, 188, 389, 515, 574, 1036, 1711
HpyCH4III	ACNGT	3 cut(s)	1102, 1603, 1652
HpyCH4IV	ACGT	1 cut(s)	1343
HpyF3I	CTNAG	5 cut(s)	456, 793, 1134, 1362, 1391
HpySE526I	ACGT	1 cut(s)	1343
Hsp92I	GRCGYC	2 cut(s)	572, 1438
Hsp92II	CATG	4 cut(s)	892, 1300, 1514, 1639
HspAI	GCGC	3 cut(s)	14, 479, 1468
Kzo9I	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
Lsp1109I	GCAGC	5 cut(s)	776, 955, 1197, 1273, 1693
LweI	GCATC	4 cut(s)	490, 1087, 1165, 1294
MaeI	CTAG	3 cut(s)	768, 1283, 1896
MaeII	ACGT	1 cut(s)	1343
MaeIII	GTNAC	2 cut(s)	212, 1090
MalI	GATC	6 cut(s)	199, 240, 495, 798, 1629, 1824
MboI	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
MfeI	CAATTG	1 cut(s)	1290
MflI	RGATCY	3 cut(s)	197, 796, 1627
MhlI	GDGCHC	5 cut(s)	8, 540, 690, 1131, 1261
MlyI	GAGTC	3 cut(s)	263, 326, 1223
MmeI	TCCRAC	2 cut(s)	354, 802
MseI	TTAA	7 cut(s)	18, 416, 600, 611, 803, 1221, 1407
MspA1I	CMGCKG	1 cut(s)	1188
MspCI	CTTAAG	2 cut(s)	599, 802
MspI	CCGG	1 cut(s)	1453
MspR9I	CCNGG	4 cut(s)	279, 975, 1443, 1453
MunI	CAATTG	1 cut(s)	1290
Mva1269I	GAATGC	2 cut(s)	1666, 1684
MvaI	CCWGG	3 cut(s)	279, 975, 1443
NciI	CCSGG	1 cut(s)	1453
NdeI	CATATG	1 cut(s)	719
NdeII	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
NlaIII	CATG	4 cut(s)	892, 1300, 1514, 1639
NlaIV	GGNNCC	4 cut(s)	7, 78, 859, 1047
NmuCI	GTSAC	2 cut(s)	212, 1090
NspI	RCATGY	1 cut(s)	892
NspV	TTCGAA	1 cut(s)	1313
PctI	GAATGC	2 cut(s)	1666, 1684
PfeI	GAWTC	6 cut(s)	320, 326, 431, 839, 1583, 1951
PkrI	GCNGC	7 cut(s)	766, 967, 970, 1000, 1187, 1288, 1683
PleI	GAGTC	3 cut(s)	263, 326, 1222
PmaCI	CACGTG	1 cut(s)	1344
PmlI	CACGTG	1 cut(s)	1344
PpsI	GAGTC	3 cut(s)	263, 326, 1222
Ppu21I	YACGTR	1 cut(s)	1344
PpuMI	RGGWCCY	1 cut(s)	163
Psp124BI	GAGCTC	2 cut(s)	690, 1131
Psp5II	RGGWCCY	1 cut(s)	163
Psp6I	CCWGG	3 cut(s)	277, 973, 1441
PspCI	CACGTG	1 cut(s)	1344
PspGI	CCWGG	3 cut(s)	277, 973, 1441
PspN4I	GGNNCC	4 cut(s)	7, 78, 859, 1047
PspPI	GGNCC	3 cut(s)	163, 925, 1855
PspPPI	RGGWCCY	1 cut(s)	163
PstI	CTGCAG	1 cut(s)	1683
PstNI	CAGNNNCTG	2 cut(s)	1754, 1954
PsuI	RGATCY	3 cut(s)	197, 796, 1627
RsaI	GTAC	1 cut(s)	1337
RsaNI	GTAC	1 cut(s)	1336
SacI	GAGCTC	2 cut(s)	690, 1131
SaqAI	TTAA	7 cut(s)	18, 416, 600, 611, 803, 1221, 1407
SatI	GCNGC	7 cut(s)	765, 966, 969, 999, 1186, 1287, 1682
Sau3AI	GATC	6 cut(s)	197, 238, 493, 796, 1627, 1822
Sau96I	GGNCC	3 cut(s)	163, 925, 1855
SchI	GAGTC	3 cut(s)	263, 326, 1223
ScrFI	CCNGG	4 cut(s)	279, 975, 1443, 1453
SduI	GDGCHC	5 cut(s)	8, 540, 690, 1131, 1261
SfaNI	GCATC	4 cut(s)	490, 1087, 1165, 1294
SfcI	CTRYAG	2 cut(s)	1575, 1679
SfuI	TTCGAA	1 cut(s)	1313
SinI	GGWCC	2 cut(s)	163, 1855
SmlI	CTYRAG	4 cut(s)	599, 802, 936, 1055
SmoI	CTYRAG	4 cut(s)	599, 802, 936, 1055
SsiI	CCGC	7 cut(s)	87, 965, 998, 1154, 1188, 1422, 1498
SspMI	CTAG	3 cut(s)	768, 1283, 1896
SstI	GAGCTC	2 cut(s)	690, 1131
StyD4I	CCNGG	4 cut(s)	277, 973, 1441, 1451
StyI	CCWWGG	3 cut(s)	1049, 1818, 1895
TaaI	ACNGT	3 cut(s)	1102, 1603, 1652
TaiI	ACGT	1 cut(s)	1346
TaqI	TCGA	5 cut(s)	468, 532, 712, 1313, 1588
TatI	WGTACW	1 cut(s)	1335
TauI	GCSGC	2 cut(s)	968, 1001
TfiI	GAWTC	6 cut(s)	320, 326, 431, 839, 1583, 1951
Tru1I	TTAA	7 cut(s)	18, 416, 600, 611, 803, 1221, 1407
Tru9I	TTAA	7 cut(s)	18, 416, 600, 611, 803, 1221, 1407
TscAI	CASTG	5 cut(s)	223, 1072, 1488, 1657, 1759
TseFI	GTSAC	2 cut(s)	212, 1090
TseI	GCWGC	5 cut(s)	764, 968, 1185, 1286, 1681
Tsp45I	GTSAC	2 cut(s)	212, 1090
TspGWI	ACGGA	1 cut(s)	763
TspRI	CASTG	5 cut(s)	223, 1072, 1488, 1657, 1759
Vha464I	CTTAAG	2 cut(s)	599, 802
VpaK11BI	GGWCC	2 cut(s)	163, 1855
XapI	RAATTY	3 cut(s)	544, 1309, 1886
XceI	RCATGY	1 cut(s)	892
XmaJI	CCTAGG	1 cut(s)	1895
XmiI	GTMKAC	1 cut(s)	1620
XspI	CTAG	3 cut(s)	768, 1283, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.