Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0007433

Physical Location & Seq

Genomic Coordinates Forward (+)

34945351 .. 34951044

Gene Structure 5694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG159000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGGCACCTCTGCTCTTAGTAAGAGAAAGGGGGCAAAACCCCAGAAGGCTTCGCCCAACAAGAAGCAAAAGAAGGAGCCTTTCACCGCCAAAAACCCAAAGAAGCCCAAGATTGTTCAAGTTCCCGAACCTTCTGACGAAGAAGAAGAAGACCTTGTAGGAGATGAGGAAGGATCTGGTTCAGATAGTGACACTGATATTTTTGGTGGCGATGATCCCCTCCAAGATGATGATGATGATGATGACGACTCCCTCCCAGGAAGTGATGAAGATGAAGACGAAGATGAAGAGAAAGGTTCTTCGGATTCGGATTCGGATTCCGACTCAGGTGATATAGAGAAGAAATCAAGGCTCATTGACCGAAAAACGCTGGAGGAAGAAGAAGAAGGTAGAAAGGAACTGGAATTAAATATCAAGGATGAATCTGATGAGTTCAGATTACCAACTAAGCAGGAACTCGAACAAGAGGCGCATCAACCTCCTGATCTTTCACACCTTCAGAGGAGGATGAAAGAGATTGTTCGAGTGCTCTCAAATTTCAAGGCATTGAGGCAAGAGGGGGCGTCAAGGAAGGATTATGTTGAACAGCTTAAGAGAGATTTAAGCTCATACTATGGCTACAATGACTTTTTGATTGGAGCTTTAGTAGAGATGTTTCCAGTTGTGGAACTTGTGGAGCTCATTGAAGCTTTTGAAAAGCCTCGACCTATATGCCTCCGAACTAACACTCTAAAGACACGAAGGAGGGATTTGGCAGCTAGTTTGATAAACAGAGGAGTAAACCTAGATCCCTTAAGCAAGTGGTCAAAAGTTGGACTGGTTGTGTATGAATCACAAGTCCCAGTTGGTGCCACTCCTGAATATATGGCTGGTTATTACATGCTCCAAAGTGCAAGCTCCTTTTTGCCCGTTATGGCCCTTGCTCCTCAAGAAAATGAACGAGTTGTTGATATGGCGGCTGCTCCTGGTGGTAAAACAACCTATGTAGCGGCTCTTATGAAAAATAGTGGAATTATATTTGCAAATGAAATGAAGGAGCCAAGGCTCAAGTCCCTCACTGCTAATTTGCATCGTATGGGGGTGACAAACACAGTCGTTTGTAACTATGACGGCAAGGAGCTCCCTAAGGTTCTGGGTAGCAATGCAGTTGATAGAGTTCTGTTAGATGCTCCTTGCAGCGGGACAGGGGTTATATCCAAAGATGAGTCTGTTAAAACTTCTAAAAGTTCTGATGAAATACAGAAATGTGCTCATCTCCAGAAGCAATTGATACTAGCTGCAATTGACATGGTGGATGCGAATTCGAAATCAGGGGGATACATTGTGTACTCCACGTGCTCCATTATGGTTGCTGAGAATGAAGCTGTTATTGACTATGCACTCAGGAAGAGAAATGTTAAACTTGTTCCCTGCGGACTTGACTTTGGGCGTCCAGGGTTTACCCGGTTTAGGGAACAGCGCTTCCATCCATCAGTGGAAAAGACGAGGCGGTTCTACCCTCATGTTCATAATATGGATGGTTTTTTTGTGGCAAAGCTGAAAAAGATGAGCAATTTGAAGCCAACTACAGCAGAATCTCGACTATCTGAAACAGTAGAGGCTGAAACAGTAGACGTAGATCTCAACATGACAGAAGACGACAGTGAAAAGAATGCCAGAGTAGATGTTCAGCAGCATTCGGCAGATGAGGACACAGAAAGTGAAAAGAAGGTTTTGGAAGATGGGAAACCAGAATTGGCAGGCACTGGGAAAAAGAGGAAAGAAAAGAAGCTCCCTTCCTTTTTCTCTCATCTGAAAGGGCAATTCCCCTTGGATCGAAAAGATGAAAAGAAAGTGCAATCCTCAGACCAAAAAAAGGAAAAGAGAGTGAAACTGAAATTTCCTCCTAGGGAGGAGATTGCAAAAGCCAGGGAAGAGAAGAGGACAGCTCTGAGGAAAAGCAAAGCTAAGAACAATACCGTTGGTACAGGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0000154 GO:0000470 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008169 GO:0008173 GO:0008284 GO:0008649 GO:0008757 GO:0009383 GO:0009451 GO:0009966 GO:0009987 GO:0010467 GO:0010646 GO:0016043 GO:0016070 GO:0016072 GO:0016434 GO:0016740 GO:0016741 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0031167 GO:0031974 GO:0031981 GO:0032259 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042127 GO:0042254 GO:0042255 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0065003 GO:0065007 GO:0070013 GO:0070475 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360 GO:1901796 GO:1902531

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F Methyltr_RsmF_N

Protein Analysis

658

Amino Acids

73.69

Weight (kDa)

5.46

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RsmF-B_ferredox	PF22458	209 - 275	8.9e-06	Methyltr_RsmF/B-like, ferredoxin-like domain
Methyltr_RsmF_N	PF17125	223 - 298	1.5e-06	N-terminal domain of 16S rRNA methyltransferase RsmF
Methyltr_RsmB-F	PF01189	304 - 514	1.9e-71	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600 AT4G26600
fragaria_vesca	FvH4_4g11570 FvH4_4g11570
malus_domestica	MD04G1044800.v1.1
prunus_persica	Prupe.8G036800_v2.0.a1 Prupe.8G036800_v2.0.a1
pyrus_communis	pycom04g03850
rosa_chinensis	RchiOBHm_Chr4g0408681
rosa_laevigata	RLG00000008641 RLG00000008644
rosa_multiflora	Rmu_sc0002856.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353050
rosa_rugosa	Rorug04G0086600
rosa_samantha	Rh4BG148300 Rh4CG159000 Rh4DG143900
rosa_wichuraiana	Rw4G012220 Rw4G012360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	5, 848
AccI	GTMKAC	1 cut(s)	1611
AciI	CCGC	6 cut(s)	87, 956, 989, 1179, 1413, 1489
AclWI	GGATC	4 cut(s)	181, 209, 782, 1821
AcsI	RAATTY	3 cut(s)	535, 1300, 1877
AcuI	CTGAAG	1 cut(s)	482
AcvI	CACGTG	1 cut(s)	1335
AcyI	GRCGYC	2 cut(s)	563, 1429
AfaI	GTAC	2 cut(s)	1328, 1966
AfeI	AGCGCT	1 cut(s)	1460
AfiI	CCNNNNNNNGG	4 cut(s)	1178, 1449, 1450, 1855
AflII	CTTAAG	2 cut(s)	590, 793
AgsI	TTSAA	6 cut(s)	119, 541, 584, 686, 695, 1558
AjnI	CCWGG	4 cut(s)	256, 964, 1432, 1907
AjuI	GAANNNNNNNTTGG	2 cut(s)	1718, 1750
AloI	GAACNNNNNNTCC	2 cut(s)	1446, 1478
Alw21I	GWGCWC	5 cut(s)	531, 681, 1122, 1252, 1340
AlwI	GGATC	4 cut(s)	181, 209, 782, 1821
AlwNI	CAGNNNCTG	1 cut(s)	1745
Aor51HI	AGCGCT	1 cut(s)	1460
AoxI	GGCC	1 cut(s)	915
ApeKI	GCWGC	5 cut(s)	755, 959, 1176, 1277, 1672
ApoI	RAATTY	3 cut(s)	535, 1300, 1877
AspA2I	CCTAGG	1 cut(s)	1886
AspLEI	GCGC	2 cut(s)	472, 1461
AspS9I	GGNCC	1 cut(s)	916
AsuC2I	CCSGG	1 cut(s)	1444
AsuHPI	GGTGA	3 cut(s)	76, 341, 1093
AsuII	TTCGAA	1 cut(s)	1304
AvrII	CCTAGG	1 cut(s)	1886
AxyI	CCTNAGG	1 cut(s)	1125
BaeGI	GKGCMC	1 cut(s)	8
BanI	GGYRCC	2 cut(s)	5, 848
BanII	GRGCYC	2 cut(s)	681, 1122
BbrPI	CACGTG	1 cut(s)	1335
BbsI	GAAGAC	3 cut(s)	156, 282, 1641
Bbv12I	GWGCWC	5 cut(s)	531, 681, 1122, 1252, 1340
BbvI	GCAGC	5 cut(s)	767, 946, 1188, 1264, 1684
BccI	CCATC	4 cut(s)	1473, 1477, 1511, 1715
BceAI	ACGGC	1 cut(s)	1126
BcgI	CGANNNNNNTGC	2 cut(s)	693, 727
BciT130I	CCWGG	4 cut(s)	258, 966, 1434, 1909
BciVI	GTATCC	1 cut(s)	1310
BcnI	CCSGG	1 cut(s)	1444
BfaI	CTAG	4 cut(s)	759, 785, 1274, 1887
BfmI	CTRYAG	1 cut(s)	1566
BfoI	RGCGCY	1 cut(s)	1462
BfrI	CTTAAG	2 cut(s)	590, 793
BfuI	GTATCC	1 cut(s)	1310
BglII	AGATCT	1 cut(s)	1618
BisI	GCNGC	7 cut(s)	756, 957, 960, 990, 1177, 1278, 1673
BlnI	CCTAGG	1 cut(s)	1886
BlsI	GCNGC	7 cut(s)	757, 958, 961, 991, 1178, 1279, 1674
Bme1390I	CCNGG	5 cut(s)	258, 966, 1434, 1444, 1909
BmgT120I	GGNCC	1 cut(s)	916
BmiI	GGNNCC	4 cut(s)	7, 78, 850, 1038
BmrFI	CCNGG	5 cut(s)	258, 966, 1434, 1444, 1909
BmrI	ACTGGG	2 cut(s)	836, 1755
BmsI	GCATC	4 cut(s)	481, 1078, 1156, 1285
BmuI	ACTGGG	2 cut(s)	836, 1755
BpiI	GAAGAC	3 cut(s)	156, 282, 1641
BplI	GAGNNNNNCTC	2 cut(s)	1912, 1944
BpmI	CTGGAG	2 cut(s)	392, 1241
Bpu14I	TTCGAA	1 cut(s)	1304
BpuEI	CTTGAG	2 cut(s)	912, 1031
BpuMI	CCSGG	1 cut(s)	1444
BsaAI	YACGTR	1 cut(s)	1335
BsaHI	GRCGYC	2 cut(s)	563, 1429
BsaJI	CCNNGG	6 cut(s)	256, 1040, 1433, 1809, 1886, 1908
BsaXI	ACNNNNNCTCC	2 cut(s)	630, 660
Bsc4I	CCNNNNNNNGG	4 cut(s)	1178, 1449, 1450, 1855
Bse1I	ACTGG	5 cut(s)	405, 659, 822, 842, 1750
Bse21I	CCTNAGG	1 cut(s)	1125
Bse3DI	GCAATG	1 cut(s)	1147
BseBI	CCWGG	4 cut(s)	258, 966, 1434, 1909
BseDI	CCNNGG	6 cut(s)	256, 1040, 1433, 1809, 1886, 1908
BseGI	GGATG	5 cut(s)	424, 513, 1300, 1465, 1522
BseLI	CCNNNNNNNGG	4 cut(s)	1178, 1449, 1450, 1855
BseMI	GCAATG	1 cut(s)	1147
BseMII	CTCAG	5 cut(s)	339, 1344, 1396, 1857, 1922
BseNI	ACTGG	5 cut(s)	405, 659, 822, 842, 1750
BseRI	GAGGAG	4 cut(s)	517, 789, 915, 1907
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	5 cut(s)	767, 946, 1188, 1264, 1684
BshFI	GGCC	1 cut(s)	917
BshNI	GGYRCC	2 cut(s)	5, 848
BsiHKAI	GWGCWC	5 cut(s)	531, 681, 1122, 1252, 1340
BsiSI	CCGG	1 cut(s)	1444
BslFI	GGGAC	3 cut(s)	824, 1036, 1195
BslI	CCNNNNNNNGG	4 cut(s)	1178, 1449, 1450, 1855
BsmFI	GGGAC	3 cut(s)	824, 1036, 1195
BsmI	GAATGC	2 cut(s)	1657, 1675
BsnI	GGCC	1 cut(s)	917
Bsp119I	TTCGAA	1 cut(s)	1304
Bsp1286I	GDGCHC	6 cut(s)	8, 531, 681, 1122, 1252, 1340
Bsp143I	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
BspACI	CCGC	6 cut(s)	87, 956, 989, 1179, 1413, 1489
BspANI	GGCC	1 cut(s)	917
BspCNI	CTCAG	5 cut(s)	338, 1345, 1395, 1856, 1923
BspLI	GGNNCC	4 cut(s)	7, 78, 850, 1038
BspPI	GGATC	4 cut(s)	181, 209, 782, 1821
BspT104I	TTCGAA	1 cut(s)	1304
BspT107I	GGYRCC	2 cut(s)	5, 848
BspTI	CTTAAG	2 cut(s)	590, 793
BsrDI	GCAATG	1 cut(s)	1147
BsrI	ACTGG	5 cut(s)	405, 659, 822, 842, 1750
BssECI	CCNNGG	6 cut(s)	256, 1040, 1433, 1809, 1886, 1908
BssMI	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
BssNI	GRCGYC	2 cut(s)	563, 1429
BssT1I	CCWWGG	3 cut(s)	1040, 1809, 1886
Bst2UI	CCWGG	4 cut(s)	258, 966, 1434, 1909
Bst4CI	ACNGT	5 cut(s)	1093, 1594, 1609, 1643, 1960
Bst6I	CTCTTC	4 cut(s)	282, 1382, 1908, 1913
BstACI	GRCGYC	2 cut(s)	563, 1429
BstAFI	CTTAAG	2 cut(s)	590, 793
BstBAI	YACGTR	1 cut(s)	1335
BstBI	TTCGAA	1 cut(s)	1304
BstC8I	GCNNGC	2 cut(s)	895, 1741
BstDEI	CTNAG	9 cut(s)	17, 325, 447, 1125, 1353, 1382, 1843, 1931, 1947
BstF5I	GGATG	5 cut(s)	424, 513, 1300, 1465, 1522
BstH2I	RGCGCY	1 cut(s)	1462
BstHHI	GCGC	2 cut(s)	472, 1461
BstKTI	GATC	6 cut(s)	176, 217, 487, 790, 1621, 1816
BstMBI	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
BstNI	CCWGG	4 cut(s)	258, 966, 1434, 1909
BstNSI	RCATGY	1 cut(s)	883
BstSCI	CCNGG	5 cut(s)	256, 964, 1432, 1442, 1907
BstSFI	CTRYAG	1 cut(s)	1566
BstSLI	GKGCMC	1 cut(s)	8
BstV1I	GCAGC	5 cut(s)	767, 946, 1188, 1264, 1684
BstV2I	GAAGAC	3 cut(s)	156, 282, 1641
BstX2I	RGATCY	3 cut(s)	173, 787, 1618
BstYI	RGATCY	3 cut(s)	173, 787, 1618
Bsu36I	CCTNAGG	1 cut(s)	1125
BsuI	GTATCC	1 cut(s)	1310
BsuRI	GGCC	1 cut(s)	917
BtgZI	GCGATG	1 cut(s)	225
BtsCI	GGATG	5 cut(s)	424, 513, 1300, 1465, 1522
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	5 cut(s)	192, 1056, 1479, 1648, 1743
Cac8I	GCNNGC	2 cut(s)	895, 1741
CaiI	CAGNNNCTG	1 cut(s)	1745
CfoI	GCGC	2 cut(s)	472, 1461
Cfr13I	GGNCC	1 cut(s)	916
CseI	GACGC	2 cut(s)	552, 1418
Csp6I	GTAC	2 cut(s)	1327, 1965
CviAII	CATG	4 cut(s)	880, 1288, 1502, 1627
CviQI	GTAC	2 cut(s)	1327, 1965
DdeI	CTNAG	9 cut(s)	17, 325, 447, 1125, 1353, 1382, 1843, 1931, 1947
DpnI	GATC	6 cut(s)	175, 216, 486, 789, 1620, 1815
DpnII	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
Eam1104I	CTCTTC	4 cut(s)	282, 1382, 1908, 1913
EarI	CTCTTC	4 cut(s)	282, 1382, 1908, 1913
Ecl136II	GAGCTC	2 cut(s)	679, 1120
Eco130I	CCWWGG	3 cut(s)	1040, 1809, 1886
Eco24I	GRGCYC	2 cut(s)	681, 1122
Eco47III	AGCGCT	1 cut(s)	1460
Eco53kI	GAGCTC	2 cut(s)	679, 1120
Eco57I	CTGAAG	1 cut(s)	482
Eco72I	CACGTG	1 cut(s)	1335
Eco81I	CCTNAGG	1 cut(s)	1125
EcoICRI	GAGCTC	2 cut(s)	679, 1120
EcoRI	GAATTC	1 cut(s)	1300
EcoRII	CCWGG	4 cut(s)	256, 964, 1432, 1907
EcoT14I	CCWWGG	3 cut(s)	1040, 1809, 1886
EcoT38I	GRGCYC	2 cut(s)	681, 1122
ErhI	CCWWGG	3 cut(s)	1040, 1809, 1886
FaeI	CATG	4 cut(s)	883, 1291, 1505, 1630
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	3 cut(s)	824, 1036, 1195
FatI	CATG	4 cut(s)	879, 1287, 1501, 1626
FauI	CCCGC	1 cut(s)	1172
FblI	GTMKAC	1 cut(s)	1611
Fnu4HI	GCNGC	7 cut(s)	756, 957, 960, 990, 1177, 1278, 1673
FokI	GGATG	5 cut(s)	431, 520, 1307, 1452, 1529
FriOI	GRGCYC	2 cut(s)	681, 1122
Fsp4HI	GCNGC	7 cut(s)	756, 957, 960, 990, 1177, 1278, 1673
FspBI	CTAG	4 cut(s)	759, 785, 1274, 1887
GlaI	GCGC	2 cut(s)	471, 1460
GluI	GCNGC	7 cut(s)	756, 957, 960, 990, 1177, 1278, 1673
GsuI	CTGGAG	2 cut(s)	392, 1241
HaeII	RGCGCY	1 cut(s)	1462
HaeIII	GGCC	1 cut(s)	917
HapII	CCGG	1 cut(s)	1444
HgaI	GACGC	2 cut(s)	552, 1418
HhaI	GCGC	2 cut(s)	472, 1461
Hin1I	GRCGYC	2 cut(s)	563, 1429
Hin1II	CATG	4 cut(s)	883, 1291, 1505, 1630
Hin6I	GCGC	2 cut(s)	470, 1459
HinP1I	GCGC	2 cut(s)	470, 1459
HindIII	AAGCTT	1 cut(s)	687
HinfI	GANTC	9 cut(s)	248, 305, 311, 317, 323, 422, 830, 1205, 1574
HpaII	CCGG	1 cut(s)	1444
HphI	GGTGA	3 cut(s)	76, 341, 1093
Hpy166II	GTNNAC	4 cut(s)	781, 1327, 1440, 1612
Hpy188III	TCNNGA	7 cut(s)	125, 482, 857, 929, 1258, 1384, 1578
Hpy8I	GTNNAC	4 cut(s)	781, 1327, 1440, 1612
HpyCH4III	ACNGT	5 cut(s)	1093, 1594, 1609, 1643, 1960
HpyCH4IV	ACGT	2 cut(s)	1334, 1614
HpyCH4V	TGCA	9 cut(s)	893, 1022, 1069, 1145, 1176, 1280, 1379, 1837, 1901
HpyF3I	CTNAG	9 cut(s)	17, 325, 447, 1125, 1353, 1382, 1843, 1931, 1947
HpySE526I	ACGT	2 cut(s)	1334, 1614
Hsp92I	GRCGYC	2 cut(s)	563, 1429
Hsp92II	CATG	4 cut(s)	883, 1291, 1505, 1630
HspAI	GCGC	2 cut(s)	470, 1459
Kzo9I	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
Lsp1109I	GCAGC	5 cut(s)	767, 946, 1188, 1264, 1684
LweI	GCATC	4 cut(s)	481, 1078, 1156, 1285
MaeI	CTAG	4 cut(s)	759, 785, 1274, 1887
MaeII	ACGT	2 cut(s)	1334, 1614
MaeIII	GTNAC	3 cut(s)	188, 1081, 1100
MalI	GATC	6 cut(s)	175, 216, 486, 789, 1620, 1815
MboI	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
MfeI	CAATTG	2 cut(s)	1265, 1281
MflI	RGATCY	3 cut(s)	173, 787, 1618
MhlI	GDGCHC	6 cut(s)	8, 531, 681, 1122, 1252, 1340
MlyI	GAGTC	3 cut(s)	242, 317, 1214
MmeI	TCCRAC	2 cut(s)	345, 793
MseI	TTAA	6 cut(s)	407, 591, 602, 794, 1212, 1398
MspA1I	CMGCKG	1 cut(s)	1179
MspCI	CTTAAG	2 cut(s)	590, 793
MspI	CCGG	1 cut(s)	1444
MspR9I	CCNGG	5 cut(s)	258, 966, 1434, 1444, 1909
MunI	CAATTG	2 cut(s)	1265, 1281
Mva1269I	GAATGC	2 cut(s)	1657, 1675
MvaI	CCWGG	4 cut(s)	258, 966, 1434, 1909
NciI	CCSGG	1 cut(s)	1444
NdeII	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
NlaIII	CATG	4 cut(s)	883, 1291, 1505, 1630
NlaIV	GGNNCC	4 cut(s)	7, 78, 850, 1038
NmuCI	GTSAC	2 cut(s)	188, 1081
NspI	RCATGY	1 cut(s)	883
NspV	TTCGAA	1 cut(s)	1304
PctI	GAATGC	2 cut(s)	1657, 1675
PfeI	GAWTC	6 cut(s)	305, 311, 317, 422, 830, 1574
PkrI	GCNGC	7 cut(s)	757, 958, 961, 991, 1178, 1279, 1674
PleI	GAGTC	3 cut(s)	242, 317, 1213
PmaCI	CACGTG	1 cut(s)	1335
PmlI	CACGTG	1 cut(s)	1335
PpsI	GAGTC	3 cut(s)	242, 317, 1213
Ppu21I	YACGTR	1 cut(s)	1335
Psp124BI	GAGCTC	2 cut(s)	681, 1122
Psp6I	CCWGG	4 cut(s)	256, 964, 1432, 1907
PspCI	CACGTG	1 cut(s)	1335
PspGI	CCWGG	4 cut(s)	256, 964, 1432, 1907
PspN4I	GGNNCC	4 cut(s)	7, 78, 850, 1038
PspPI	GGNCC	1 cut(s)	916
PstNI	CAGNNNCTG	1 cut(s)	1745
PsuI	RGATCY	3 cut(s)	173, 787, 1618
RsaI	GTAC	2 cut(s)	1328, 1966
RsaNI	GTAC	2 cut(s)	1327, 1965
SacI	GAGCTC	2 cut(s)	681, 1122
SaqAI	TTAA	6 cut(s)	407, 591, 602, 794, 1212, 1398
SatI	GCNGC	7 cut(s)	756, 957, 960, 990, 1177, 1278, 1673
Sau3AI	GATC	6 cut(s)	173, 214, 484, 787, 1618, 1813
Sau96I	GGNCC	1 cut(s)	916
SchI	GAGTC	3 cut(s)	242, 317, 1214
ScrFI	CCNGG	5 cut(s)	258, 966, 1434, 1444, 1909
SduI	GDGCHC	6 cut(s)	8, 531, 681, 1122, 1252, 1340
SfaNI	GCATC	4 cut(s)	481, 1078, 1156, 1285
SfcI	CTRYAG	1 cut(s)	1566
SfuI	TTCGAA	1 cut(s)	1304
SmlI	CTYRAG	4 cut(s)	590, 793, 927, 1046
SmoI	CTYRAG	4 cut(s)	590, 793, 927, 1046
SsiI	CCGC	6 cut(s)	87, 956, 989, 1179, 1413, 1489
SspMI	CTAG	4 cut(s)	759, 785, 1274, 1887
SstI	GAGCTC	2 cut(s)	681, 1122
StyD4I	CCNGG	5 cut(s)	256, 964, 1432, 1442, 1907
StyI	CCWWGG	3 cut(s)	1040, 1809, 1886
TaaI	ACNGT	5 cut(s)	1093, 1594, 1609, 1643, 1960
TaiI	ACGT	2 cut(s)	1337, 1617
TaqI	TCGA	6 cut(s)	459, 523, 703, 1304, 1579, 1816
TaqII	GACCGA	1 cut(s)	375
TatI	WGTACW	1 cut(s)	1326
TauI	GCSGC	2 cut(s)	959, 992
TfiI	GAWTC	6 cut(s)	305, 311, 317, 422, 830, 1574
Tru1I	TTAA	6 cut(s)	407, 591, 602, 794, 1212, 1398
Tru9I	TTAA	6 cut(s)	407, 591, 602, 794, 1212, 1398
TscAI	CASTG	5 cut(s)	199, 1063, 1479, 1648, 1750
TseFI	GTSAC	2 cut(s)	188, 1081
TseI	GCWGC	5 cut(s)	755, 959, 1176, 1277, 1672
Tsp45I	GTSAC	2 cut(s)	188, 1081
TspRI	CASTG	5 cut(s)	199, 1063, 1479, 1648, 1750
Vha464I	CTTAAG	2 cut(s)	590, 793
XapI	RAATTY	3 cut(s)	535, 1300, 1877
XceI	RCATGY	1 cut(s)	883
XmaJI	CCTAGG	1 cut(s)	1886
XmiI	GTMKAC	1 cut(s)	1611
XspI	CTAG	4 cut(s)	759, 785, 1274, 1887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.