RLG00000010103
WRKY Family

protease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0018019
Physical Location & Seq
Reverse (-)
63039733 .. 63041457
1725 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010103

Sequence Viewer

Length: 1725 bp
ATGACCGAGGAGGAGGCCAACAAGAAAGTCTTGCAGTACGAGAATGTCCTGGTGACAAACAGAGAGCTTCATATTCTTAAAGGCCCTCGCTTTCTAAACGACATCATCATCGAATTCTACTTCCTCCATATTTCTAATGCCTTCCTTCAATCCCATGAGTCGTTCCGAGATGACATCCTTCTGGTTTCGCCTGCCCTCTCATTCTTTCTGCAGCAGGATTTTGGGGATGACTCCCATATCAAGGACTTTGCGGAGTCCAACAAAGTAGATAGCAAGCAGGTTGTAATGTTTACGGTGAATAACAACCTAGATGCCGGCAGGAACGACGGAGGAAGCCACTGGAGCTTGCTGGTGTACTTCAGAAAATCAAATACATTCGTACACTATGACAGCTTGGGATGTAATGGTTCTTTTGCTAAGAAGCTTTTCCGAGCAGTCAAGAAACATGTGGCAACACCAGCTGAGAGTAGCTCCACCACTGGTACAGTTGTTCGTGGAGATGTGGATTCTACCAATACTGATGCAATCAATATTGGAGACGTGGATTCTAGCAATACTACTACAATCAATATTGGAGACGTGGACTCTAACAATACTAGTACAATCAATGGAGATGGAGATTCTACCGATACTACTATGGTCTCAGATTCTACTAATACTAGTGTGGTCGATGGAGATTGTACCATGATCGATGGAGATACTACTAATACCAGTATGATGGATGCAGATTTTTCTTCTAGTAGTAGTAGAGCTGGTGGAGATTATACTAATTGTACTAGAGTTCATGGACATTGTACAAGGTTTGATAATGGTGAAAACCAGTTGCAACGATATAATCAGAAGAAACAAAGGATGCGACCGAATTGGGAAGAAGAGGATATGCCCTGGAGGTATCATCAACGTGGTTTTCCCCGTAGTTGGTTGTGGAATGGGGATTATATGAACTCGAGGTCTGGTTATACTCGTTGGGATAGGGACGCTCGTGGGTTTCTTTTGCCAAGAGGTTACCAGTATCATGAGGAGGAAGATGATTTTAAAGAAGAGGGATGCATGCCGAAGCAGAAGAATTTTTATGACTGTGGTTTGTACGTGATGGAAATTGCTAGGGTGGTCTGTGAATGGTACTACCTTGATGACGAAGCTAAGCAGCAACAGCCGGAGCATCGAGGTTTTTTCTGTAAGTTGGGGGGTGGCGGCCGGTTTCCCAACATCAGTGAGTCTGTTCATACTTCTTTGGAATCCACAATGCGCGATATGCTCTTGTCCATCATTCAACAACGTGCACGCGAGTCTGGAATACATCTTGATTTATTTTCTTCTGATGATGATGAGTCCAAGGATGACGATGTTCTTGGTTTACATTCTGATGAAAATGAGTCCAAGGATGATGACAGTGCCCCCCAATTCGGCTCCCAGCCCAAGTATGATGATGAAGAAAAACCGGTGGATAGTGATGTTCGTGATTTGTTTTATGGTAATAAAGCCAATGAAAGGAACCACCAATTCGGCCCCCAGCCCCGGCCCCAACAATATAGGTCGGAGGATGAAGCACTCGAGGATTGTGGTGTTGTTGCTGCTCCCCCTCCACAATCTGTATCCTCAACTTCAGAAGATGAGCCAGAAGAAATTTGGGATCCTATACTAGAGGACAGCAGGTGCTCATTGTTCAGTAAATCTAGCAATTATCTAGAAGGAGATGATCTCCTTGCTAAAAAACGAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48 WRKY

Protein Analysis

575

Amino Acids

65.18

Weight (kDa)

4.64

Isoelectric Point (pI)

55.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018019)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g01090
rosa_chinensis RchiOBHm_Chr4g0387651
rosa_laevigata RLG00000010103
rosa_multiflora Rmu_sc0003953.1_g000007
rosa_roxburghii Rroxscaffold_5G00334320
rosa_rugosa Rorug03G0312200
rosa_samantha Rh4AG017500 Rh4BG012300 Rh4CG018700 Rh4DG013300
rosa_wichuraiana Rw4G001130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1644
Acc36I ACCTGC 2 cut(s) 268, 1644
AccII CGCG 2 cut(s) 1251, 1287
AciI CCGC 2 cut(s) 251, 1194
AclWI GGATC 2 cut(s) 1628, 1641
AcoI YGGCCR 1 cut(s) 1195
AcsI RAATTY 3 cut(s) 113, 1066, 1626
AcuI CTGAAG 2 cut(s) 343, 1590
AfiI CCNNNNNNNGG 5 cut(s) 241, 918, 1406, 1491, 1518
AflIII ACRYGT 1 cut(s) 445
AgeI ACCGGT 1 cut(s) 1441
AgsI TTSAA 2 cut(s) 149, 1274
AhlI ACTAGT 2 cut(s) 596, 659
AjiI CACGTC 2 cut(s) 541, 580
AjnI CCWGG 2 cut(s) 48, 884
AluBI AGCT 8 cut(s) 67, 345, 393, 424, 461, 471, 752, 1142
AluI AGCT 8 cut(s) 67, 345, 393, 424, 461, 471, 752, 1142
Alw21I GWGCWC 2 cut(s) 1285, 1661
Alw26I GTCTC 3 cut(s) 531, 570, 646
Alw44I GTGCAC 1 cut(s) 1281
AlwI GGATC 2 cut(s) 1628, 1641
Ama87I CYCGRG 2 cut(s) 946, 1553
AoxI GGCC 5 cut(s) 15, 82, 1195, 1507, 1520
ApaLI GTGCAC 1 cut(s) 1281
ApeKI GCWGC 3 cut(s) 211, 1147, 1574
ApoI RAATTY 3 cut(s) 113, 1066, 1626
AsiGI ACCGGT 1 cut(s) 1441
Asp700I GAANNNNTTC 1 cut(s) 425
AspLEI GCGC 1 cut(s) 1251
AspS9I GGNCC 3 cut(s) 83, 1508, 1521
AsuC2I CCSGG 1 cut(s) 1519
AsuHPI GGTGA 3 cut(s) 64, 307, 824
AvaI CYCGRG 2 cut(s) 946, 1553
BaeGI GKGCMC 2 cut(s) 1285, 1399
BaeI ACNNNNGTAYC 2 cut(s) 474, 507
BamHI GGATCC 1 cut(s) 1633
BauI CACGAG 1 cut(s) 981
Bbv12I GWGCWC 2 cut(s) 1285, 1661
BbvI GCAGC 3 cut(s) 223, 1159, 1561
BccI CCATC 6 cut(s) 608, 665, 686, 712, 1087, 1274
BciT130I CCWGG 2 cut(s) 50, 886
BciVI GTATCC 1 cut(s) 1606
BcnI CCSGG 1 cut(s) 1519
BcoDI GTCTC 3 cut(s) 531, 570, 646
BcuI ACTAGT 2 cut(s) 596, 659
BfmI CTRYAG 1 cut(s) 209
BfuAI ACCTGC 2 cut(s) 268, 1644
BfuI GTATCC 1 cut(s) 1606
BisI GCNGC 4 cut(s) 212, 1148, 1195, 1575
BlpI GCTNAGC 1 cut(s) 1143
BlsI GCNGC 4 cut(s) 213, 1149, 1196, 1576
Bme1390I CCNGG 3 cut(s) 50, 886, 1519
BmeT110I CYCGRG 2 cut(s) 946, 1553
BmgBI CACGTC 2 cut(s) 541, 580
BmgT120I GGNCC 3 cut(s) 83, 1508, 1521
BmiI GGNNCC 5 cut(s) 1411, 1496, 1510, 1523, 1635
BmrFI CCNGG 3 cut(s) 50, 886, 1519
BmsI GCATC 6 cut(s) 301, 511, 712, 843, 1037, 1171
BplI GAGNNNNNCTC 4 cut(s) 455, 487, 1686, 1718
BpmI CTGGAG 2 cut(s) 361, 907
Bpu1102I GCTNAGC 1 cut(s) 1143
BpuMI CCSGG 1 cut(s) 1519
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 1 cut(s) 1090
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 5 cut(s) 6, 884, 1335, 1380, 1517
BsaWI WCCGGW 1 cut(s) 1441
Bsc4I CCNNNNNNNGG 5 cut(s) 241, 918, 1406, 1491, 1518
Bse118I RCCGGY 3 cut(s) 314, 1197, 1441
Bse1I ACTGG 5 cut(s) 344, 484, 711, 820, 1009
BseBI CCWGG 2 cut(s) 50, 886
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 5 cut(s) 6, 884, 1335, 1380, 1517
BseGI GGATG 9 cut(s) 174, 232, 404, 727, 858, 1052, 1345, 1390, 1549
BseLI CCNNNNNNNGG 5 cut(s) 241, 918, 1406, 1491, 1518
BseMII CTCAG 2 cut(s) 453, 657
BseNI ACTGG 5 cut(s) 344, 484, 711, 820, 1009
BseRI GAGGAG 3 cut(s) 23, 26, 1034
BseSI GKGCMC 2 cut(s) 1285, 1399
BseX3I CGGCCG 1 cut(s) 1195
BseXI GCAGC 3 cut(s) 223, 1159, 1561
BseYI CCCAGC 2 cut(s) 1413, 1512
Bsh1236I CGCG 2 cut(s) 1251, 1287
Bsh1285I CGRYCG 2 cut(s) 860, 1198
BshFI GGCC 5 cut(s) 17, 84, 1197, 1509, 1522
BshTI ACCGGT 1 cut(s) 1441
BshVI ATCGAT 1 cut(s) 690
BsiEI CGRYCG 2 cut(s) 860, 1198
BsiHKAI GWGCWC 2 cut(s) 1285, 1661
BsiHKCI CYCGRG 2 cut(s) 946, 1553
BsiSI CCGG 5 cut(s) 315, 1157, 1198, 1442, 1519
BslFI GGGAC 1 cut(s) 989
BslI CCNNNNNNNGG 5 cut(s) 241, 918, 1406, 1491, 1518
BsmAI GTCTC 3 cut(s) 531, 570, 646
BsmBI CGTCTC 2 cut(s) 531, 570
BsmFI GGGAC 1 cut(s) 989
BsnI GGCC 5 cut(s) 17, 84, 1197, 1509, 1522
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 2 cut(s) 946, 1553
Bsp1286I GDGCHC 3 cut(s) 1285, 1399, 1661
Bsp1407I TGTACA 1 cut(s) 794
Bsp143I GATC 3 cut(s) 687, 1633, 1699
Bsp1720I GCTNAGC 1 cut(s) 1143
BspACI CCGC 2 cut(s) 251, 1194
BspANI GGCC 5 cut(s) 17, 84, 1197, 1509, 1522
BspCNI CTCAG 2 cut(s) 454, 656
BspDI ATCGAT 1 cut(s) 690
BspFNI CGCG 2 cut(s) 1251, 1287
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 5 cut(s) 1411, 1496, 1510, 1523, 1635
BspMAI CTGCAG 1 cut(s) 213
BspMI ACCTGC 2 cut(s) 268, 1644
BspPI GGATC 2 cut(s) 1628, 1641
BspTNI GGTCTC 1 cut(s) 646
BsrFI RCCGGY 3 cut(s) 314, 1197, 1441
BsrGI TGTACA 1 cut(s) 794
BsrI ACTGG 5 cut(s) 344, 484, 711, 820, 1009
BssAI RCCGGY 3 cut(s) 314, 1197, 1441
BssECI CCNNGG 5 cut(s) 6, 884, 1335, 1380, 1517
BssMI GATC 3 cut(s) 687, 1633, 1699
BssSI CACGAG 1 cut(s) 981
BssT1I CCWWGG 2 cut(s) 1335, 1380
Bst2BI CACGAG 1 cut(s) 981
Bst2UI CCWGG 2 cut(s) 50, 886
Bst4CI ACNGT 4 cut(s) 295, 487, 1079, 1394
Bst6I CTCTTC 2 cut(s) 867, 1035
BstAUI TGTACA 1 cut(s) 794
BstBAI YACGTR 1 cut(s) 1090
BstC8I GCNNGC 6 cut(s) 192, 275, 316, 347, 1052, 1285
BstDEI CTNAG 4 cut(s) 417, 462, 643, 1143
BstEII GGTNACC 1 cut(s) 1004
BstF5I GGATG 9 cut(s) 174, 232, 404, 727, 858, 1052, 1345, 1390, 1549
BstFNI CGCG 2 cut(s) 1251, 1287
BstHHI GCGC 1 cut(s) 1251
BstKTI GATC 3 cut(s) 690, 1636, 1702
BstMAI GTCTC 3 cut(s) 531, 570, 646
BstMBI GATC 3 cut(s) 687, 1633, 1699
BstMCI CGRYCG 2 cut(s) 860, 1198
BstMWI GCNNNNNNNGC 4 cut(s) 342, 458, 1153, 1255
BstNI CCWGG 2 cut(s) 50, 886
BstNSI RCATGY 2 cut(s) 449, 1054
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 3 cut(s) 48, 884, 1517
BstSFI CTRYAG 1 cut(s) 209
BstSLI GKGCMC 2 cut(s) 1285, 1399
BstUI CGCG 2 cut(s) 1251, 1287
BstV1I GCAGC 3 cut(s) 223, 1159, 1561
BstX2I RGATCY 1 cut(s) 1633
BstXI CCANNNNNNTGG 1 cut(s) 718
BstYI RGATCY 1 cut(s) 1633
BstZI CGGCCG 1 cut(s) 1195
Bsu15I ATCGAT 1 cut(s) 690
BsuI GTATCC 1 cut(s) 1606
BsuRI GGCC 5 cut(s) 17, 84, 1197, 1509, 1522
BsuTUI ATCGAT 1 cut(s) 690
BtrI CACGTC 2 cut(s) 541, 580
BtsCI GGATG 9 cut(s) 174, 232, 404, 727, 858, 1052, 1345, 1390, 1549
BtsIMutI CAGTG 4 cut(s) 337, 477, 1219, 1399
BveI ACCTGC 2 cut(s) 268, 1644
Cac8I GCNNGC 6 cut(s) 192, 275, 316, 347, 1052, 1285
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 1 cut(s) 1251
Cfr10I RCCGGY 3 cut(s) 314, 1197, 1441
Cfr13I GGNCC 3 cut(s) 83, 1508, 1521
ClaI ATCGAT 1 cut(s) 690
CseI GACGC 1 cut(s) 986
CspAI ACCGGT 1 cut(s) 1441
CviAII CATG 7 cut(s) 155, 446, 685, 785, 1016, 1051, 1722
DdeI CTNAG 4 cut(s) 417, 462, 643, 1143
DpnI GATC 3 cut(s) 689, 1635, 1701
DpnII GATC 3 cut(s) 687, 1633, 1699
DraI TTTAAA 1 cut(s) 1036
EaeI YGGCCR 1 cut(s) 1195
EagI CGGCCG 1 cut(s) 1195
Eam1104I CTCTTC 2 cut(s) 867, 1035
EarI CTCTTC 2 cut(s) 867, 1035
EclXI CGGCCG 1 cut(s) 1195
Eco130I CCWWGG 2 cut(s) 1335, 1380
Eco31I GGTCTC 1 cut(s) 646
Eco52I CGGCCG 1 cut(s) 1195
Eco57I CTGAAG 2 cut(s) 343, 1590
Eco88I CYCGRG 2 cut(s) 946, 1553
Eco91I GGTNACC 1 cut(s) 1004
EcoO109I RGGNCCY 1 cut(s) 83
EcoO65I GGTNACC 1 cut(s) 1004
EcoRI GAATTC 1 cut(s) 113
EcoRII CCWGG 2 cut(s) 48, 884
EcoT14I CCWWGG 2 cut(s) 1335, 1380
EcoT22I ATGCAT 1 cut(s) 1052
ErhI CCWWGG 2 cut(s) 1335, 1380
Esp3I CGTCTC 2 cut(s) 531, 570
FaeI CATG 7 cut(s) 158, 449, 688, 788, 1019, 1054, 1725
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 1 cut(s) 989
FatI CATG 7 cut(s) 154, 445, 684, 784, 1015, 1050, 1721
Fnu4HI GCNGC 4 cut(s) 212, 1148, 1195, 1575
FokI GGATG 9 cut(s) 161, 239, 411, 734, 865, 1059, 1352, 1397, 1556
Fsp4HI GCNGC 4 cut(s) 212, 1148, 1195, 1575
GlaI GCGC 1 cut(s) 1250
GluI GCNGC 4 cut(s) 212, 1148, 1195, 1575
GsaI CCCAGC 2 cut(s) 1417, 1516
GsuI CTGGAG 2 cut(s) 361, 907
HaeIII GGCC 5 cut(s) 17, 84, 1197, 1509, 1522
HapII CCGG 5 cut(s) 315, 1157, 1198, 1442, 1519
HgaI GACGC 1 cut(s) 986
HhaI GCGC 1 cut(s) 1251
Hin1II CATG 7 cut(s) 158, 449, 688, 788, 1019, 1054, 1725
Hin6I GCGC 1 cut(s) 1249
HinP1I GCGC 1 cut(s) 1249
HindIII AAGCTT 1 cut(s) 422
HpaII CCGG 5 cut(s) 315, 1157, 1198, 1442, 1519
HphI GGTGA 3 cut(s) 64, 307, 824
Hpy166II GTNNAC 6 cut(s) 291, 355, 382, 583, 1283, 1358
Hpy188I TCNGA 9 cut(s) 167, 362, 431, 646, 840, 1321, 1366, 1540, 1609
Hpy188III TCNNGA 6 cut(s) 439, 1016, 1293, 1304, 1460, 1688
Hpy8I GTNNAC 6 cut(s) 291, 355, 382, 583, 1283, 1358
Hpy99I CGWCG 1 cut(s) 329
HpyAV CCTTC 4 cut(s) 151, 155, 188, 1685
HpyCH4III ACNGT 4 cut(s) 295, 487, 1079, 1394
HpyCH4IV ACGT 5 cut(s) 540, 579, 901, 1089, 1279
HpyCH4V TGCA 7 cut(s) 34, 211, 524, 725, 826, 1050, 1283
HpyF10VI GCNNNNNNNGC 4 cut(s) 342, 458, 1153, 1255
HpyF3I CTNAG 4 cut(s) 417, 462, 643, 1143
HpySE526I ACGT 5 cut(s) 540, 579, 901, 1089, 1279
Hsp92II CATG 7 cut(s) 158, 449, 688, 788, 1019, 1054, 1725
HspAI GCGC 1 cut(s) 1249
KroI GCCGGC 1 cut(s) 314
KroNI GCCGGC 1 cut(s) 316
Kzo9I GATC 3 cut(s) 687, 1633, 1699
LmnI GCTCC 5 cut(s) 342, 476, 1159, 1415, 1582
Lsp1109I GCAGC 3 cut(s) 223, 1159, 1561
LweI GCATC 6 cut(s) 301, 511, 712, 843, 1037, 1171
MaeII ACGT 5 cut(s) 540, 579, 901, 1089, 1279
MaeIII GTNAC 2 cut(s) 52, 1004
MalI GATC 3 cut(s) 689, 1635, 1701
MboI GATC 3 cut(s) 687, 1633, 1699
MflI RGATCY 1 cut(s) 1633
MhlI GDGCHC 3 cut(s) 1285, 1399, 1661
MluCI AATT 9 cut(s) 113, 769, 862, 1066, 1098, 1403, 1502, 1626, 1681
MlyI GAGTC 8 cut(s) 167, 224, 263, 578, 1226, 1298, 1340, 1385
MmeI TCCRAC 2 cut(s) 282, 1518
Mph1103I ATGCAT 1 cut(s) 1052
MroNI GCCGGC 1 cut(s) 314
MroXI GAANNNNTTC 1 cut(s) 425
MseI TTAA 2 cut(s) 78, 1035
MslI CAYNNNNRTG 2 cut(s) 900, 1365
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 5 cut(s) 315, 1157, 1198, 1442, 1519
MspR9I CCNGG 3 cut(s) 50, 886, 1519
MvaI CCWGG 2 cut(s) 50, 886
MvnI CGCG 2 cut(s) 1251, 1287
MwoI GCNNNNNNNGC 4 cut(s) 342, 458, 1153, 1255
NaeI GCCGGC 1 cut(s) 316
NciI CCSGG 1 cut(s) 1519
NdeII GATC 3 cut(s) 687, 1633, 1699
NgoMIV GCCGGC 1 cut(s) 314
NlaIII CATG 7 cut(s) 158, 449, 688, 788, 1019, 1054, 1725
NlaIV GGNNCC 5 cut(s) 1411, 1496, 1510, 1523, 1635
NmuCI GTSAC 1 cut(s) 52
NsiI ATGCAT 1 cut(s) 1052
NspI RCATGY 2 cut(s) 449, 1054
PaeI GCATGC 1 cut(s) 1054
PaeR7I CTCGAG 2 cut(s) 946, 1553
PagI TCATGA 1 cut(s) 1015
PaqCI CACCTGC 1 cut(s) 1644
PciI ACATGT 1 cut(s) 445
PdiI GCCGGC 1 cut(s) 316
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 5 cut(s) 506, 545, 620, 647, 1238
PinAI ACCGGT 1 cut(s) 1441
PkrI GCNGC 4 cut(s) 213, 1149, 1196, 1576
PleI GAGTC 8 cut(s) 166, 224, 262, 578, 1225, 1297, 1339, 1384
PpsI GAGTC 8 cut(s) 166, 224, 262, 578, 1225, 1297, 1339, 1384
Ppu21I YACGTR 1 cut(s) 1090
PscI ACATGT 1 cut(s) 445
Psp6I CCWGG 2 cut(s) 48, 884
PspEI GGTNACC 1 cut(s) 1004
PspFI CCCAGC 2 cut(s) 1413, 1512
PspGI CCWGG 2 cut(s) 48, 884
PspN4I GGNNCC 5 cut(s) 1411, 1496, 1510, 1523, 1635
PspPI GGNCC 3 cut(s) 83, 1508, 1521
PspXI VCTCGAGB 2 cut(s) 946, 1553
PstI CTGCAG 1 cut(s) 213
PsuI RGATCY 1 cut(s) 1633
PvuII CAGCTG 1 cut(s) 461
RseI CAYNNNNRTG 2 cut(s) 900, 1365
SaqAI TTAA 2 cut(s) 78, 1035
SatI GCNGC 4 cut(s) 212, 1148, 1195, 1575
Sau3AI GATC 3 cut(s) 687, 1633, 1699
Sau96I GGNCC 3 cut(s) 83, 1508, 1521
SchI GAGTC 8 cut(s) 167, 224, 263, 578, 1226, 1298, 1340, 1385
ScrFI CCNGG 3 cut(s) 50, 886, 1519
SduI GDGCHC 3 cut(s) 1285, 1399, 1661
SfaNI GCATC 6 cut(s) 301, 511, 712, 843, 1037, 1171
SfcI CTRYAG 1 cut(s) 209
Sfr274I CTCGAG 2 cut(s) 946, 1553
SlaI CTCGAG 2 cut(s) 946, 1553
SmiMI CAYNNNNRTG 2 cut(s) 900, 1365
SmlI CTYRAG 2 cut(s) 946, 1553
SmoI CTYRAG 2 cut(s) 946, 1553
SpeI ACTAGT 2 cut(s) 596, 659
SphI GCATGC 1 cut(s) 1054
Sse9I AATT 9 cut(s) 113, 769, 862, 1066, 1098, 1403, 1502, 1626, 1681
SsiI CCGC 2 cut(s) 251, 1194
SspI AATATT 2 cut(s) 532, 571
StyD4I CCNGG 3 cut(s) 48, 884, 1517
StyI CCWWGG 2 cut(s) 1335, 1380
TaaI ACNGT 4 cut(s) 295, 487, 1079, 1394
TaiI ACGT 5 cut(s) 543, 582, 904, 1092, 1282
TaqI TCGA 6 cut(s) 111, 669, 690, 947, 1165, 1554
TaqII GACCGA 2 cut(s) 20, 874
TasI AATT 9 cut(s) 113, 769, 862, 1066, 1098, 1403, 1502, 1626, 1681
TatI WGTACW 4 cut(s) 354, 599, 773, 794
TauI GCSGC 1 cut(s) 1197
TfiI GAWTC 5 cut(s) 506, 545, 620, 647, 1238
Tru1I TTAA 2 cut(s) 78, 1035
Tru9I TTAA 2 cut(s) 78, 1035
TscAI CASTG 4 cut(s) 344, 484, 1219, 1399
TseFI GTSAC 1 cut(s) 52
TseI GCWGC 3 cut(s) 211, 1147, 1574
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 8 cut(s) 59, 773, 956, 1214, 1383, 1446, 1503, 1560
TspGWI ACGGA 1 cut(s) 342
TspRI CASTG 4 cut(s) 344, 484, 1219, 1399
VneI GTGCAC 1 cut(s) 1281
XapI RAATTY 3 cut(s) 113, 1066, 1626
XbaI TCTAGA 1 cut(s) 1687
XceI RCATGY 2 cut(s) 449, 1054
XcmI CCANNNNNNNNNTGG 1 cut(s) 1626
XhoI CTCGAG 2 cut(s) 946, 1553
XmnI GAANNNNTTC 1 cut(s) 425
Zsp2I ATGCAT 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.