RLG00000011366

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
8885010 .. 8885530
521 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011366

Sequence Viewer

Length: 393 bp
ATGGCAGCTGTAGAAATCATAGGCTACAACCATGCCATGTTTGGGTTTAGACCCTCCGGTCCATATTGGCGGGAAGTTCGTAAGAGTGCGACCTTGGAGTTGCTCCCCATCAGATTCTTAGGCACGTTCGAGTCTGTGAAGTGCGCACCTTCTTGGAGCAATTGGAAGCGATATTCTGTTGCGACCAATGAGGATGAGAAGAAAGAAGCGTGTCGTGTCCAGACTGCCTTGAGGGAGTTCTTCTATTTTGCAGGGCTGTTTGCGGTGGGTGATGCAATTCCTTATTTTCGGTGGTTGGATTTGGGTGGACATGAGAAGGCGATGAAGAAAACTGCAAAAGAAATGGACGCCATTGTTGGGGGCTGGCTAGAAGAGCATAAGCGAAAAAGATAA

Protein Analysis

131

Amino Acids

15.04

Weight (kDa)

9.3

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019823)

Species Orthologous Gene IDs
pyrus_communis pycom08g03100
rosa_chinensis RchiOBHm_Chr5g0058881 RchiOBHm_Chr6g0300081
rosa_laevigata RLG00000011366 RLG00000011368
rosa_roxburghii Rroxscaffold_7G00168100
rosa_rugosa Rorug06G0293800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 57
Acc16I TGCGCA 1 cut(s) 145
AciI CCGC 2 cut(s) 70, 263
AcyI GRCGYC 1 cut(s) 348
AfiI CCNNNNNNNGG 2 cut(s) 42, 357
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
ApeKI GCWGC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 146
AspS9I GGNCC 1 cut(s) 59
AsuHPI GGTGA 1 cut(s) 281
AvaII GGWCC 1 cut(s) 59
BbvI GCAGC 1 cut(s) 17
BccI CCATC 1 cut(s) 116
BfaI CTAG 1 cut(s) 368
BfmI CTRYAG 1 cut(s) 9
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme18I GGWCC 1 cut(s) 59
BmgT120I GGNCC 1 cut(s) 59
BmsI GCATC 1 cut(s) 262
BpuEI CTTGAG 1 cut(s) 250
BsaHI GRCGYC 1 cut(s) 348
BsaJI CCNNGG 1 cut(s) 93
BsaWI WCCGGW 1 cut(s) 56
Bsc4I CCNNNNNNNGG 2 cut(s) 42, 357
BseDI CCNNGG 1 cut(s) 93
BseGI GGATG 1 cut(s) 199
BseLI CCNNNNNNNGG 2 cut(s) 42, 357
BseXI GCAGC 1 cut(s) 17
BsiSI CCGG 1 cut(s) 57
BslI CCNNNNNNNGG 2 cut(s) 42, 357
BspACI CCGC 2 cut(s) 70, 263
BspQI GCTCTTC 1 cut(s) 366
BssECI CCNNGG 1 cut(s) 93
BssNI GRCGYC 1 cut(s) 348
BssT1I CCWWGG 1 cut(s) 93
Bst6I CTCTTC 1 cut(s) 366
BstACI GRCGYC 1 cut(s) 348
BstC8I GCNNGC 1 cut(s) 365
BstDEI CTNAG 1 cut(s) 118
BstF5I GGATG 1 cut(s) 199
BstHHI GCGC 1 cut(s) 146
BstMWI GCNNNNNNNGC 1 cut(s) 373
BstSFI CTRYAG 1 cut(s) 9
BstV1I GCAGC 1 cut(s) 17
BtgZI GCGATG 1 cut(s) 335
BtsCI GGATG 1 cut(s) 199
Cac8I GCNNGC 1 cut(s) 365
CfoI GCGC 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 59
CseI GACGC 1 cut(s) 356
CviAII CATG 3 cut(s) 32, 37, 311
CviJI RGCY 5 cut(s) 8, 24, 256, 363, 367
CviKI_1 RGCY 5 cut(s) 8, 24, 256, 363, 367
DdeI CTNAG 1 cut(s) 118
DrdI GACNNNNNNGTC 1 cut(s) 57
DseDI GACNNNNNNGTC 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 366
EarI CTCTTC 1 cut(s) 366
Eco130I CCWWGG 1 cut(s) 93
Eco47I GGWCC 1 cut(s) 59
EcoT14I CCWWGG 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 93
FaeI CATG 3 cut(s) 35, 40, 314
FaiI YATR 6 cut(s) 20, 33, 38, 64, 312, 378
FatI CATG 3 cut(s) 31, 36, 310
FauI CCCGC 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 1 cut(s) 206
Fsp4HI GCNGC 1 cut(s) 6
FspAI RTGCGCAY 1 cut(s) 145
FspBI CTAG 1 cut(s) 368
FspI TGCGCA 1 cut(s) 145
GlaI GCGC 1 cut(s) 145
GluI GCNGC 1 cut(s) 6
HapII CCGG 1 cut(s) 57
HgaI GACGC 1 cut(s) 356
HhaI GCGC 1 cut(s) 146
Hin1I GRCGYC 1 cut(s) 348
Hin1II CATG 3 cut(s) 35, 40, 314
Hin6I GCGC 1 cut(s) 144
HinP1I GCGC 1 cut(s) 144
HinfI GANTC 2 cut(s) 114, 131
HpaII CCGG 1 cut(s) 57
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 1 cut(s) 308
Hpy188I TCNGA 1 cut(s) 113
Hpy188III TCNNGA 1 cut(s) 220
Hpy8I GTNNAC 1 cut(s) 308
HpyAV CCTTC 2 cut(s) 159, 310
HpyCH4IV ACGT 1 cut(s) 125
HpyCH4V TGCA 3 cut(s) 251, 275, 335
HpyF10VI GCNNNNNNNGC 1 cut(s) 373
HpyF3I CTNAG 1 cut(s) 118
HpySE526I ACGT 1 cut(s) 125
Hsp92I GRCGYC 1 cut(s) 348
Hsp92II CATG 3 cut(s) 35, 40, 314
HspAI GCGC 1 cut(s) 144
LguI GCTCTTC 1 cut(s) 366
LmnI GCTCC 2 cut(s) 108, 156
LpnPI CCDG 4 cut(s) 70, 233, 237, 349
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 1 cut(s) 262
MaeI CTAG 1 cut(s) 368
MaeII ACGT 1 cut(s) 125
MboII GAAGA 4 cut(s) 211, 232, 337, 383
MfeI CAATTG 1 cut(s) 160
MluCI AATT 2 cut(s) 160, 276
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 276
MnlI CCTC 3 cut(s) 64, 184, 225
MspA1I CMGCKG 1 cut(s) 8
MspI CCGG 1 cut(s) 57
MunI CAATTG 1 cut(s) 160
MwoI GCNNNNNNNGC 1 cut(s) 373
NlaIII CATG 3 cut(s) 35, 40, 314
NsbI TGCGCA 1 cut(s) 145
PciSI GCTCTTC 1 cut(s) 366
PfeI GAWTC 1 cut(s) 114
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
PspPI GGNCC 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 366
SatI GCNGC 1 cut(s) 6
Sau96I GGNCC 1 cut(s) 59
SchI GAGTC 1 cut(s) 140
SetI ASST 4 cut(s) 10, 95, 128, 151
SfaNI GCATC 1 cut(s) 262
SfcI CTRYAG 1 cut(s) 9
SinI GGWCC 1 cut(s) 59
SmlI CTYRAG 1 cut(s) 229
SmoI CTYRAG 1 cut(s) 229
Sse9I AATT 2 cut(s) 160, 276
SsiI CCGC 2 cut(s) 70, 263
SspMI CTAG 1 cut(s) 368
StyI CCWWGG 1 cut(s) 93
TaiI ACGT 1 cut(s) 128
TaqI TCGA 1 cut(s) 129
TasI AATT 2 cut(s) 160, 276
TfiI GAWTC 1 cut(s) 114
TseI GCWGC 1 cut(s) 5
TspDTI ATGAA 1 cut(s) 338
VpaK11BI GGWCC 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 38
XspI CTAG 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.