Rorug06G0293800
MYB Family

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
44586595 .. 44590383
3789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0293800.1

Sequence Viewer

Length: 426 bp
ATGTCGTGGCTTCCCTCCGCCGTCGCTCTCAATTGCATCGACGACTTCGCCATGAAGCAAGACCACTTCTCCGGCGACGAGCACGTCCCGCTCAGCCACTTGGCCCACGGCAGGATCGACTCCGCCTCGGCTGTGGTCCTCCAATCATTCGCGTACCTCCCACGCGCCGCCCAGCGTCGGCTACGTCCTTACCAGCTCATCCTTTGCCTCGGCTCCGGCGACTGCGCCACTGACTCCACTTTCACTGCCGACCTCGGTTGTCAATCTCCGAAGCATTTCGATGGCCGGATTTCCGGCGTTTACGGCTACGAAGATGATGCGAAATGTGGTACGCCGACATGGATCTGCAAGGGGCTTACTTATTTTCTTATTTGCAGGCCTGGTTTACTTCTATCTATAAGGCTTTTGATCTGTTGGAAATGGTAA

Protein Analysis

141

Amino Acids

15.65

Weight (kDa)

6.92

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AccBSI CCGCTC 1 cut(s) 91
AccII CGCG 2 cut(s) 152, 165
AciI CCGC 4 cut(s) 18, 89, 123, 168
AclWI GGATC 2 cut(s) 122, 350
AcoI YGGCCR 1 cut(s) 283
AfaI GTAC 2 cut(s) 155, 331
AfiI CCNNNNNNNGG 2 cut(s) 111, 177
AjiI CACGTC 1 cut(s) 85
AjnI CCWGG 1 cut(s) 379
AluBI AGCT 1 cut(s) 196
AluI AGCT 1 cut(s) 196
Alw21I GWGCWC 1 cut(s) 84
AlwI GGATC 2 cut(s) 122, 350
AoxI GGCC 3 cut(s) 102, 283, 377
Asp700I GAANNNNTTC 1 cut(s) 275
AspLEI GCGC 2 cut(s) 167, 227
AspS9I GGNCC 2 cut(s) 103, 136
AvaII GGWCC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 84
BccI CCATC 1 cut(s) 275
BceAI ACGGC 3 cut(s) 5, 124, 319
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 1 cut(s) 381
BisI GCNGC 1 cut(s) 168
BlpI GCTNAGC 1 cut(s) 92
BlsI GCNGC 1 cut(s) 169
Bme1390I CCNGG 1 cut(s) 381
Bme18I GGWCC 1 cut(s) 136
BmgBI CACGTC 1 cut(s) 85
BmgT120I GGNCC 2 cut(s) 103, 136
BmiI GGNNCC 1 cut(s) 214
BmrFI CCNGG 1 cut(s) 381
BmsI GCATC 2 cut(s) 45, 307
Bpu1102I GCTNAGC 1 cut(s) 92
BsaJI CCNNGG 4 cut(s) 106, 126, 208, 253
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 177
BseBI CCWGG 1 cut(s) 381
BseDI CCNNGG 4 cut(s) 106, 126, 208, 253
BseGI GGATG 1 cut(s) 198
BseLI CCNNNNNNNGG 2 cut(s) 111, 177
BseMII CTCAG 1 cut(s) 106
BseYI CCCAGC 1 cut(s) 171
Bsh1236I CGCG 2 cut(s) 152, 165
BshFI GGCC 3 cut(s) 104, 285, 379
BsiHKAI GWGCWC 1 cut(s) 84
BsiSI CCGG 4 cut(s) 72, 216, 286, 294
BslFI GGGAC 1 cut(s) 71
BslI CCNNNNNNNGG 2 cut(s) 111, 177
BsmFI GGGAC 1 cut(s) 71
BsnI GGCC 3 cut(s) 104, 285, 379
Bsp1286I GDGCHC 1 cut(s) 84
Bsp143I GATC 3 cut(s) 114, 342, 408
Bsp1720I GCTNAGC 1 cut(s) 92
BspACI CCGC 4 cut(s) 18, 89, 123, 168
BspANI GGCC 3 cut(s) 104, 285, 379
BspCNI CTCAG 1 cut(s) 105
BspFNI CGCG 2 cut(s) 152, 165
BspLI GGNNCC 1 cut(s) 214
BspPI GGATC 2 cut(s) 122, 350
BsrBI CCGCTC 1 cut(s) 91
BssECI CCNNGG 4 cut(s) 106, 126, 208, 253
BssMI GATC 3 cut(s) 114, 342, 408
Bst2UI CCWGG 1 cut(s) 381
BstC8I GCNNGC 1 cut(s) 377
BstDEI CTNAG 1 cut(s) 92
BstDSI CCRYGG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 198
BstFNI CGCG 2 cut(s) 152, 165
BstHHI GCGC 2 cut(s) 167, 227
BstKTI GATC 3 cut(s) 117, 345, 411
BstMBI GATC 3 cut(s) 114, 342, 408
BstMWI GCNNNNNNNGC 2 cut(s) 88, 303
BstNI CCWGG 1 cut(s) 381
BstSCI CCNGG 1 cut(s) 379
BstUI CGCG 2 cut(s) 152, 165
BstX2I RGATCY 1 cut(s) 342
BstYI RGATCY 1 cut(s) 342
BsuRI GGCC 3 cut(s) 104, 285, 379
BtgI CCRYGG 1 cut(s) 106
BtrI CACGTC 1 cut(s) 85
BtsCI GGATG 1 cut(s) 198
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 2 cut(s) 228, 243
Cac8I GCNNGC 1 cut(s) 377
CfoI GCGC 2 cut(s) 167, 227
Cfr13I GGNCC 2 cut(s) 103, 136
CseI GACGC 1 cut(s) 164
Csp6I GTAC 2 cut(s) 154, 330
CviAII CATG 2 cut(s) 52, 339
CviQI GTAC 2 cut(s) 154, 330
DdeI CTNAG 1 cut(s) 92
DpnI GATC 3 cut(s) 116, 344, 410
DpnII GATC 3 cut(s) 114, 342, 408
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 1 cut(s) 283
EciI GGCGGA 2 cut(s) 7, 112
Eco147I AGGCCT 1 cut(s) 379
Eco47I GGWCC 1 cut(s) 136
EcoRII CCWGG 1 cut(s) 379
FaeI CATG 2 cut(s) 55, 342
FaiI YATR 3 cut(s) 53, 340, 398
FaqI GGGAC 1 cut(s) 71
FatI CATG 2 cut(s) 51, 338
FauI CCCGC 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 168
FokI GGATG 1 cut(s) 185
Fsp4HI GCNGC 1 cut(s) 168
GlaI GCGC 2 cut(s) 166, 226
GluI GCNGC 1 cut(s) 168
GsaI CCCAGC 1 cut(s) 175
HaeIII GGCC 3 cut(s) 104, 285, 379
HapII CCGG 4 cut(s) 72, 216, 286, 294
HgaI GACGC 1 cut(s) 164
HhaI GCGC 2 cut(s) 167, 227
Hin1II CATG 2 cut(s) 55, 342
Hin6I GCGC 2 cut(s) 165, 225
HinP1I GCGC 2 cut(s) 165, 225
HinfI GANTC 2 cut(s) 119, 233
HpaII CCGG 4 cut(s) 72, 216, 286, 294
Hpy166II GTNNAC 2 cut(s) 301, 386
Hpy188I TCNGA 1 cut(s) 270
Hpy8I GTNNAC 2 cut(s) 301, 386
Hpy99I CGWCG 4 cut(s) 26, 44, 80, 180
HpyCH4IV ACGT 2 cut(s) 84, 184
HpyCH4V TGCA 3 cut(s) 36, 348, 375
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 303
HpyF3I CTNAG 1 cut(s) 92
HpySE526I ACGT 2 cut(s) 84, 184
Hsp92II CATG 2 cut(s) 55, 342
HspAI GCGC 2 cut(s) 165, 225
Kzo9I GATC 3 cut(s) 114, 342, 408
LmnI GCTCC 1 cut(s) 218
LweI GCATC 2 cut(s) 45, 307
MaeII ACGT 2 cut(s) 84, 184
MalI GATC 3 cut(s) 116, 344, 410
MbiI CCGCTC 1 cut(s) 91
MboI GATC 3 cut(s) 114, 342, 408
MboII GAAGA 1 cut(s) 323
MfeI CAATTG 1 cut(s) 31
MflI RGATCY 1 cut(s) 342
MhlI GDGCHC 1 cut(s) 84
MluCI AATT 1 cut(s) 31
MlyI GAGTC 2 cut(s) 113, 227
MmeI TCCRAC 1 cut(s) 395
MnlI CCTC 6 cut(s) 25, 136, 149, 167, 218, 263
MroXI GAANNNNTTC 1 cut(s) 275
MslI CAYNNNNRTG 1 cut(s) 279
MspI CCGG 4 cut(s) 72, 216, 286, 294
MspR9I CCNGG 1 cut(s) 381
MunI CAATTG 1 cut(s) 31
MvaI CCWGG 1 cut(s) 381
MvnI CGCG 2 cut(s) 152, 165
MwoI GCNNNNNNNGC 2 cut(s) 88, 303
NdeII GATC 3 cut(s) 114, 342, 408
NlaIII CATG 2 cut(s) 55, 342
NlaIV GGNNCC 1 cut(s) 214
NmeAIII GCCGAG 2 cut(s) 107, 189
PceI AGGCCT 1 cut(s) 379
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 216
PdmI GAANNNNTTC 1 cut(s) 275
PkrI GCNGC 1 cut(s) 169
PleI GAGTC 2 cut(s) 113, 227
PpsI GAGTC 2 cut(s) 113, 227
Psp6I CCWGG 1 cut(s) 379
PspFI CCCAGC 1 cut(s) 171
PspGI CCWGG 1 cut(s) 379
PspN4I GGNNCC 1 cut(s) 214
PspPI GGNCC 2 cut(s) 103, 136
PsuI RGATCY 1 cut(s) 342
RsaI GTAC 2 cut(s) 155, 331
RsaNI GTAC 2 cut(s) 154, 330
RseI CAYNNNNRTG 1 cut(s) 279
SatI GCNGC 1 cut(s) 168
Sau3AI GATC 3 cut(s) 114, 342, 408
Sau96I GGNCC 2 cut(s) 103, 136
SchI GAGTC 2 cut(s) 113, 227
ScrFI CCNGG 1 cut(s) 381
SduI GDGCHC 1 cut(s) 84
SetI ASST 5 cut(s) 87, 159, 187, 198, 255
SfaNI GCATC 2 cut(s) 45, 307
SinI GGWCC 1 cut(s) 136
SmiMI CAYNNNNRTG 1 cut(s) 279
Sse9I AATT 1 cut(s) 31
SseBI AGGCCT 1 cut(s) 379
SsiI CCGC 4 cut(s) 18, 89, 123, 168
StuI AGGCCT 1 cut(s) 379
StyD4I CCNGG 1 cut(s) 379
TaiI ACGT 2 cut(s) 87, 187
TaqI TCGA 3 cut(s) 39, 117, 279
TasI AATT 1 cut(s) 31
TauI GCSGC 1 cut(s) 170
TscAI CASTG 2 cut(s) 235, 250
TspDTI ATGAA 1 cut(s) 68
TspRI CASTG 2 cut(s) 235, 250
VpaK11BI GGWCC 1 cut(s) 136
XmnI GAANNNNTTC 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.