MD15G1028200.v1.1

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000137
Physical Location & Seq
Forward (+)
1669684 .. 1671770
2087 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1028200.v1.1.491

Sequence Viewer

Length: 1581 bp
ATGGATTCTCTCCCTTATGCAAACTCTATCACTGCTGGCCTGTTCACAGTATTCATCGTGTTCTATTACTTATCACGAAGATGGAGAGCTGCCAATCACAAGGGAAAATTATCCCCACCAGAAGCCAAGGGTGGATGGCCTATATTTGGTCACCTTCATTTGTTCGGAGGCTCCACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTACGGACCCATTTTCACTATCCGCCTTGGCGTCCATCCGTCGTTGGTAATAAGCAGCAGTGAGATCGCAAAAGAATGCTACACAACCAAAGACTTGAGCGTACTCTCTCGCCCAAAGATGGTGGTTGTAGATCACGTTAGCTACAACTATGCAATGTTTGGGTTCGGACCACCTGGACCCTATTGGCGAGAAATTCGCAAGATCGTTACCTTGGAGTTGCTCTCAGTCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGTGTCGGAAGTGACTACTTTCTTAAAAGAATTGCACGAACTTTGGAGTACAAAGAAAAAGGAGGGCTCGAAAGATGGAGTGGTTGTAGAGCTAAAGCAATGGCTTGGGGACATGACGCTGAACGTTATTCTTACAATGGTGGCCGGAAAGCGGTATTCGGTGGCTGCCGCTGGGGATGAGAAGAAAGAAGCGCGTAGGGTTCAGACTGCATTGAGGGAGTTATTTGATTATCTGGGCATGTTTTTGGTGGGTGATGCGGTTCCTTATCTGCGGTGGTTGGATTGGGGTGGACATGAGAAGGCAATGAAGAAAAGTGCAACGGAAATGCACGCCATTATTGCAGAGTGGGTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGATGCAAAAGGAGAACAGGACTTCATAGATGCGTTGCTTTCTGTGCTTGATGGTGCAGACCTTGGCAGTTTTGATGCTGATACGATCACCAAAGCCACAAGCTTGAATGTTATTGCAGGAGGTGGCGATACCACCATGGTGACATTGACGTGGGCAATATCGTTATTGCTGAACAACCCTCACGTTTTGAAAAAAGCTCTAAACGAACTGGACACCAAAATAGGCAAAAAAAGAGTTGTGAGTGAGGAAGATATAAGCAACTTGGTCTACATCCAAGCTATTGTAAAGGAGACGTTACGTTTGTACCCTGTAGGACCACTATCAGGGCCGCGTATATTCACTGAAGATTGCACCATTGCTGGCTACCACATCCGAAAGGGCACCCGGTTGATCCCAAACTTCTGGAAGATCCAAACTGACCTGAAAAATTGGCCTGAGCCATTCGAGTTCAAGCCAGAGAGATTTCTTACCACACACAAGGATGTTGATCTGAAGGGTCAACATTTTCAGTTTATTCCTTTTTCAAGTGGTAGAAGATCATGCCCTGGTTTGGCATTTGGTCTTCAAATGGTGCAATTTACATTGGCTAGTTTTCTGCATGCATTTGAAATCTCAAACCCGTCGAGTGCACCAATTGATATGACAGAGAGTTTTGGAATGACTAACGTTAAGGCAGCTCCACTCAATGTTCTCATCAAACCTCGCTTATCTTCTGAACTCTATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

527

Amino Acids

58.88

Weight (kDa)

9.11

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 506 4.3e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1232
AccI GTMKAC 1 cut(s) 1119
AccII CGCG 2 cut(s) 664, 1183
AccIII TCCGGA 1 cut(s) 441
AciI CCGC 7 cut(s) 206, 235, 622, 639, 728, 742, 1181
AclI AACGTT 2 cut(s) 594, 1518
AclWI GGATC 2 cut(s) 1237, 1255
AcoI YGGCCR 1 cut(s) 612
AcsI RAATTY 1 cut(s) 405
AcuI CTGAAG 2 cut(s) 1215, 1364
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 4 cut(s) 215, 315, 520, 1157
AfiI CCNNNNNNNGG 5 cut(s) 146, 331, 621, 1175, 1402
AgsI TTSAA 7 cut(s) 824, 958, 1042, 1303, 1377, 1418, 1460
AjiI CACGTC 1 cut(s) 1002
AjnI CCWGG 2 cut(s) 385, 1396
AleI CACNNNNGTG 1 cut(s) 989
AluBI AGCT 8 cut(s) 89, 354, 454, 562, 954, 1049, 1130, 1529
AluI AGCT 8 cut(s) 89, 354, 454, 562, 954, 1049, 1130, 1529
Alw21I GWGCWC 1 cut(s) 1483
Alw26I GTCTC 1 cut(s) 1136
Alw44I GTGCAC 1 cut(s) 1479
AlwI GGATC 2 cut(s) 1237, 1255
Aor13HI TCCGGA 1 cut(s) 441
AoxI GGCC 5 cut(s) 37, 137, 612, 1178, 1283
ApaLI GTGCAC 1 cut(s) 1479
ApeKI GCWGC 5 cut(s) 89, 267, 454, 635, 1526
ApoI RAATTY 1 cut(s) 405
ArsI GACNNNNNNTTYG 2 cut(s) 1135, 1167
AspLEI GCGC 1 cut(s) 664
AspS9I GGNCC 5 cut(s) 218, 380, 389, 1166, 1178
AsuC2I CCSGG 1 cut(s) 1237
AsuHPI GGTGA 5 cut(s) 143, 734, 863, 931, 1003
AvaII GGWCC 4 cut(s) 218, 380, 389, 1166
BaeGI GKGCMC 2 cut(s) 1235, 1483
BaeI ACNNNNGTAYC 2 cut(s) 1139, 1172
BanI GGYRCC 1 cut(s) 1232
BanII GRGCYC 1 cut(s) 539
BbsI GAAGAC 1 cut(s) 1406
Bbv12I GWGCWC 1 cut(s) 1483
BbvI GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BccI CCATC 6 cut(s) 75, 129, 255, 325, 539, 896
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 2 cut(s) 387, 1398
BcnI CCSGG 1 cut(s) 1237
BcoDI GTCTC 1 cut(s) 1136
BfaI CTAG 1 cut(s) 1440
BfmI CTRYAG 1 cut(s) 1161
BisI GCNGC 7 cut(s) 90, 268, 455, 636, 639, 1181, 1527
BlsI GCNGC 7 cut(s) 91, 269, 456, 637, 640, 1182, 1528
Bme1390I CCNGG 3 cut(s) 387, 1237, 1398
Bme18I GGWCC 4 cut(s) 218, 380, 389, 1166
BmgBI CACGTC 1 cut(s) 1002
BmgT120I GGNCC 5 cut(s) 218, 380, 389, 1166, 1178
BmiI GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
BmrFI CCNGG 3 cut(s) 387, 1237, 1398
BmsI GCATC 4 cut(s) 715, 844, 871, 916
BpiI GAAGAC 1 cut(s) 1406
BplI GAGNNNNNCTC 2 cut(s) 419, 451
Bpu10I CCTNAGC 1 cut(s) 1287
BpuEI CTTGAG 2 cut(s) 328, 443
BpuMI CCSGG 1 cut(s) 1237
BsaBI GATNNNNATC 1 cut(s) 1338
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 7 cut(s) 126, 201, 238, 423, 913, 987, 1396
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 540, 570
Bsc4I CCNNNNNNNGG 5 cut(s) 146, 331, 621, 1175, 1402
Bse1I ACTGG 1 cut(s) 1065
Bse3DI GCAATG 4 cut(s) 372, 575, 780, 1206
Bse8I GATNNNNATC 1 cut(s) 1338
BseAI TCCGGA 1 cut(s) 441
BseBI CCWGG 2 cut(s) 387, 1398
BseDI CCNNGG 7 cut(s) 126, 201, 238, 423, 913, 987, 1396
BseGI GGATG 6 cut(s) 140, 247, 652, 1122, 1221, 1339
BseJI GATNNNNATC 1 cut(s) 1338
BseLI CCNNNNNNNGG 5 cut(s) 146, 331, 621, 1175, 1402
BseMI GCAATG 4 cut(s) 372, 575, 780, 1206
BseMII CTCAG 2 cut(s) 450, 1278
BseNI ACTGG 1 cut(s) 1065
BseRI GAGGAG 2 cut(s) 171, 853
BseSI GKGCMC 2 cut(s) 1235, 1483
BseXI GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BseYI CCCAGC 1 cut(s) 641
BsgI GTGCAG 1 cut(s) 927
Bsh1236I CGCG 2 cut(s) 664, 1183
BshFI GGCC 5 cut(s) 39, 139, 614, 1180, 1285
BshNI GGYRCC 1 cut(s) 1232
BsiHKAI GWGCWC 1 cut(s) 1483
BsiSI CCGG 3 cut(s) 442, 615, 1237
BslFI GGGAC 1 cut(s) 593
BslI CCNNNNNNNGG 5 cut(s) 146, 331, 621, 1175, 1402
BsmAI GTCTC 1 cut(s) 1136
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 1 cut(s) 593
BsmI GAATGC 1 cut(s) 293
BsnI GGCC 5 cut(s) 39, 139, 614, 1180, 1285
Bsp1286I GDGCHC 3 cut(s) 539, 1235, 1483
Bsp13I TCCGGA 1 cut(s) 441
Bsp143I GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
Bsp19I CCATGG 2 cut(s) 201, 987
BspACI CCGC 7 cut(s) 206, 235, 622, 639, 728, 742, 1181
BspANI GGCC 5 cut(s) 39, 139, 614, 1180, 1285
BspCNI CTCAG 2 cut(s) 449, 1279
BspEI TCCGGA 1 cut(s) 441
BspFNI CGCG 2 cut(s) 664, 1183
BspLI GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
BspPI GGATC 2 cut(s) 1237, 1255
BspQI GCTCTTC 1 cut(s) 819
BspT107I GGYRCC 1 cut(s) 1232
BsrDI GCAATG 4 cut(s) 372, 575, 780, 1206
BsrI ACTGG 1 cut(s) 1065
BssECI CCNNGG 7 cut(s) 126, 201, 238, 423, 913, 987, 1396
BssMI GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 6 cut(s) 126, 201, 238, 423, 913, 987
Bst2UI CCWGG 2 cut(s) 387, 1398
Bst4CI ACNGT 1 cut(s) 49
Bst6I CTCTTC 1 cut(s) 819
BstACI GRCGYC 1 cut(s) 243
BstC8I GCNNGC 4 cut(s) 37, 801, 1213, 1452
BstDEI CTNAG 2 cut(s) 436, 1287
BstDSI CCRYGG 2 cut(s) 201, 987
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 6 cut(s) 140, 247, 652, 1122, 1221, 1339
BstFNI CGCG 2 cut(s) 664, 1183
BstHHI GCGC 1 cut(s) 664
BstKTI GATC 8 cut(s) 279, 346, 417, 939, 1245, 1263, 1342, 1391
BstMAI GTCTC 1 cut(s) 1136
BstMBI GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
BstMWI GCNNNNNNNGC 3 cut(s) 460, 809, 895
BstNI CCWGG 2 cut(s) 387, 1398
BstNSI RCATGY 2 cut(s) 712, 1454
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 3 cut(s) 385, 1235, 1396
BstSFI CTRYAG 1 cut(s) 1161
BstSLI GKGCMC 2 cut(s) 1235, 1483
BstUI CGCG 2 cut(s) 664, 1183
BstV1I GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BstV2I GAAGAC 1 cut(s) 1406
BstX2I RGATCY 1 cut(s) 1260
BstXI CCANNNNNNTGG 1 cut(s) 1254
BstYI RGATCY 1 cut(s) 1260
BsuRI GGCC 5 cut(s) 39, 139, 614, 1180, 1285
BtgI CCRYGG 2 cut(s) 201, 987
BtrI CACGTC 1 cut(s) 1002
BtsCI GGATG 6 cut(s) 140, 247, 652, 1122, 1221, 1339
BtsI GCAGTG 2 cut(s) 30, 277
BtsIMutI CAGTG 3 cut(s) 30, 277, 1191
Cac8I GCNNGC 4 cut(s) 37, 801, 1213, 1452
CfoI GCGC 1 cut(s) 664
Cfr13I GGNCC 5 cut(s) 218, 380, 389, 1166, 1178
CseI GACGC 2 cut(s) 232, 595
Csp6I GTAC 4 cut(s) 214, 314, 519, 1156
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviAII CATG 7 cut(s) 202, 583, 709, 764, 988, 1392, 1451
CviQI GTAC 4 cut(s) 214, 314, 519, 1156
DdeI CTNAG 2 cut(s) 436, 1287
DpnI GATC 8 cut(s) 278, 345, 416, 938, 1244, 1262, 1341, 1390
DpnII GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
EaeI YGGCCR 1 cut(s) 612
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
EciI GGCGGA 2 cut(s) 221, 224
Eco130I CCWWGG 6 cut(s) 126, 201, 238, 423, 913, 987
Eco24I GRGCYC 1 cut(s) 539
Eco47I GGWCC 4 cut(s) 218, 380, 389, 1166
Eco57I CTGAAG 2 cut(s) 1215, 1364
Eco91I GGTNACC 1 cut(s) 149
EcoO65I GGTNACC 1 cut(s) 149
EcoRII CCWGG 2 cut(s) 385, 1396
EcoT14I CCWWGG 6 cut(s) 126, 201, 238, 423, 913, 987
EcoT22I ATGCAT 1 cut(s) 1456
EcoT38I GRGCYC 1 cut(s) 539
ErhI CCWWGG 6 cut(s) 126, 201, 238, 423, 913, 987
Esp3I CGTCTC 1 cut(s) 1136
FaeI CATG 7 cut(s) 205, 586, 712, 767, 991, 1395, 1454
FaqI GGGAC 1 cut(s) 593
FatI CATG 7 cut(s) 201, 582, 708, 763, 987, 1391, 1450
FblI GTMKAC 1 cut(s) 1119
Fnu4HI GCNGC 7 cut(s) 90, 268, 455, 636, 639, 1181, 1527
FokI GGATG 6 cut(s) 147, 234, 659, 1109, 1208, 1346
FriOI GRGCYC 1 cut(s) 539
Fsp4HI GCNGC 7 cut(s) 90, 268, 455, 636, 639, 1181, 1527
FspBI CTAG 1 cut(s) 1440
GlaI GCGC 1 cut(s) 663
GluI GCNGC 7 cut(s) 90, 268, 455, 636, 639, 1181, 1527
GsaI CCCAGC 1 cut(s) 645
HaeIII GGCC 5 cut(s) 39, 139, 614, 1180, 1285
HapII CCGG 3 cut(s) 442, 615, 1237
HgaI GACGC 2 cut(s) 232, 595
HhaI GCGC 1 cut(s) 664
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 7 cut(s) 205, 586, 712, 767, 991, 1395, 1454
Hin6I GCGC 1 cut(s) 662
HinP1I GCGC 1 cut(s) 662
HincII GTYRAC 1 cut(s) 1352
HindII GTYRAC 1 cut(s) 1352
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 1 cut(s) 5
HpaII CCGG 3 cut(s) 442, 615, 1237
HphI GGTGA 5 cut(s) 143, 734, 863, 931, 1003
Hpy166II GTNNAC 5 cut(s) 45, 761, 1120, 1352, 1481
Hpy188I TCNGA 7 cut(s) 167, 380, 478, 675, 1226, 1344, 1567
Hpy188III TCNNGA 3 cut(s) 75, 442, 1255
Hpy8I GTNNAC 5 cut(s) 45, 761, 1120, 1352, 1481
Hpy99I CGWCG 2 cut(s) 256, 1477
HpyAV CCTTC 4 cut(s) 164, 439, 763, 1339
HpyCH4III ACNGT 1 cut(s) 49
HpyCH4IV ACGT 7 cut(s) 348, 594, 1001, 1035, 1145, 1150, 1518
HpyF10VI GCNNNNNNNGC 3 cut(s) 460, 809, 895
HpyF3I CTNAG 2 cut(s) 436, 1287
HpySE526I ACGT 7 cut(s) 348, 594, 1001, 1035, 1145, 1150, 1518
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 7 cut(s) 205, 586, 712, 767, 991, 1395, 1454
HspAI GCGC 1 cut(s) 662
Kpn2I TCCGGA 1 cut(s) 441
Kzo9I GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
LguI GCTCTTC 1 cut(s) 819
LmnI GCTCC 3 cut(s) 176, 197, 1534
Lsp1109I GCAGC 5 cut(s) 76, 279, 441, 622, 1538
LweI GCATC 4 cut(s) 715, 844, 871, 916
MaeI CTAG 1 cut(s) 1440
MaeII ACGT 7 cut(s) 348, 594, 1001, 1035, 1145, 1150, 1518
MaeIII GTNAC 5 cut(s) 149, 418, 481, 991, 1146
MalI GATC 8 cut(s) 278, 345, 416, 938, 1244, 1262, 1341, 1390
MboI GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
MfeI CAATTG 1 cut(s) 1485
MflI RGATCY 1 cut(s) 1260
MhlI GDGCHC 3 cut(s) 539, 1235, 1483
MluCI AATT 6 cut(s) 107, 405, 500, 1279, 1427, 1485
MmeI TCCRAC 2 cut(s) 456, 729
Mph1103I ATGCAT 1 cut(s) 1456
MroI TCCGGA 1 cut(s) 441
MseI TTAA 2 cut(s) 494, 1521
MslI CAYNNNNRTG 5 cut(s) 79, 470, 989, 1000, 1332
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 3 cut(s) 442, 615, 1237
MspR9I CCNGG 3 cut(s) 387, 1237, 1398
MunI CAATTG 1 cut(s) 1485
Mva1269I GAATGC 1 cut(s) 293
MvaI CCWGG 2 cut(s) 387, 1398
MvnI CGCG 2 cut(s) 664, 1183
MwoI GCNNNNNNNGC 3 cut(s) 460, 809, 895
NciI CCSGG 1 cut(s) 1237
NcoI CCATGG 2 cut(s) 201, 987
NdeII GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
NlaIII CATG 7 cut(s) 205, 586, 712, 767, 991, 1395, 1454
NlaIV GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
NmuCI GTSAC 3 cut(s) 149, 481, 991
NsiI ATGCAT 1 cut(s) 1456
NspI RCATGY 2 cut(s) 712, 1454
OliI CACNNNNGTG 1 cut(s) 989
PaeI GCATGC 1 cut(s) 1454
PciSI GCTCTTC 1 cut(s) 819
PctI GAATGC 1 cut(s) 293
PfeI GAWTC 1 cut(s) 5
PkrI GCNGC 7 cut(s) 91, 269, 456, 637, 640, 1182, 1528
Psp1406I AACGTT 2 cut(s) 594, 1518
Psp6I CCWGG 2 cut(s) 385, 1396
PspEI GGTNACC 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 641
PspGI CCWGG 2 cut(s) 385, 1396
PspN4I GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
PspPI GGNCC 5 cut(s) 218, 380, 389, 1166, 1178
PsuI RGATCY 1 cut(s) 1260
RsaI GTAC 4 cut(s) 215, 315, 520, 1157
RsaNI GTAC 4 cut(s) 214, 314, 519, 1156
RseI CAYNNNNRTG 5 cut(s) 79, 470, 989, 1000, 1332
SapI GCTCTTC 1 cut(s) 819
SaqAI TTAA 2 cut(s) 494, 1521
SatI GCNGC 7 cut(s) 90, 268, 455, 636, 639, 1181, 1527
Sau3AI GATC 8 cut(s) 276, 343, 414, 936, 1242, 1260, 1339, 1388
Sau96I GGNCC 5 cut(s) 218, 380, 389, 1166, 1178
ScrFI CCNGG 3 cut(s) 387, 1237, 1398
SduI GDGCHC 3 cut(s) 539, 1235, 1483
SfaNI GCATC 4 cut(s) 715, 844, 871, 916
SfcI CTRYAG 1 cut(s) 1161
SinI GGWCC 4 cut(s) 218, 380, 389, 1166
SmiMI CAYNNNNRTG 5 cut(s) 79, 470, 989, 1000, 1332
SmlI CTYRAG 2 cut(s) 307, 458
SmoI CTYRAG 2 cut(s) 307, 458
SphI GCATGC 1 cut(s) 1454
Sse9I AATT 6 cut(s) 107, 405, 500, 1279, 1427, 1485
SsiI CCGC 7 cut(s) 206, 235, 622, 639, 728, 742, 1181
SspMI CTAG 1 cut(s) 1440
StyD4I CCNGG 3 cut(s) 385, 1235, 1396
StyI CCWWGG 6 cut(s) 126, 201, 238, 423, 913, 987
TaaI ACNGT 1 cut(s) 49
TaiI ACGT 7 cut(s) 351, 597, 1004, 1038, 1148, 1153, 1521
TaqI TCGA 4 cut(s) 469, 539, 1296, 1475
TasI AATT 6 cut(s) 107, 405, 500, 1279, 1427, 1485
TatI WGTACW 1 cut(s) 518
TauI GCSGC 2 cut(s) 641, 1183
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 2 cut(s) 494, 1521
Tru9I TTAA 2 cut(s) 494, 1521
TscAI CASTG 3 cut(s) 37, 277, 1198
TseFI GTSAC 3 cut(s) 149, 481, 991
TseI GCWGC 5 cut(s) 89, 267, 454, 635, 1526
Tsp45I GTSAC 3 cut(s) 149, 481, 991
TspDTI ATGAA 4 cut(s) 43, 146, 791, 865
TspGWI ACGGA 3 cut(s) 231, 240, 806
TspRI CASTG 3 cut(s) 37, 277, 1198
VneI GTGCAC 1 cut(s) 1479
VpaK11BI GGWCC 4 cut(s) 218, 380, 389, 1166
XapI RAATTY 1 cut(s) 405
XceI RCATGY 2 cut(s) 712, 1454
XmiI GTMKAC 1 cut(s) 1119
XspI CTAG 1 cut(s) 1440
Zsp2I ATGCAT 1 cut(s) 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.