RchiOBHm_Chr7g0233631

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000137
Physical Location & Seq
Reverse (-)
58162627 .. 58165085
2459 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20942

Sequence Viewer

Length: 1620 bp
ATGGAGTACTCCCACCTCTTACCTGTTGTTTTGGCCTTTTCAATAATATTTCTCTACTCTCTGATACTAAAATACTCCTCAAGGGTAGCGAGAAAACTCAACCTTCCACCGCAAGCCTGCGGCGCTAGGCCGATAATCGGCCACCTCCACTTATTGAGAGGCTCATCAGAACCAGCCCACATAGTGTTGGGTAAGATGGCCGATCAGTACGGACCCATCTTCACTATGAAGATGGGGATGAAGAGAACCATAGTCGTCAGCAACTCAGAAATGGCCAAGGAGTGTTTAAAGACAAATGACGTCATCTTCGCCGGCCGTCCGAAGGGTCTAGCCAGAGAAACCCTCGGCTACGACGGTGCCTTCTTTGTCTTCAGCCGTTACGACCACTACTTCCGTAAGATAAGGAGGATAGTCATGACGGAAGCCTTGTCCAGCCACCGCCTCGAAACCCTAAAACACATTCGGGAATCCGAAGTGAAGGCGGCGATAAAGGGAATCTTTGACAGAATCAGGAGGAGGGATGGTGGTGGTTCGAATTCGAAGAAGGATTCCGGGGTGGTGGTGGAGATGGAAGAATGGTTTGAGGGCATAAACGAGAACGTGATATTTCGGATGATAGTAGGGAAACGATTTTCAGAAGCTGGGAAGATCTTAAATTCTGAGAAAGGTGATTTGATTTTGAGGGAGAAGATTAGGGGATATGTGAAATTGCTTGCAGCTTTTGCAGTGTCCGATACGATACCATTCTTGAGGTGGTTGGACTTGTTTAGGGTTAAGAGAGAGATGAAGAAGATGGCTAAAGAGGTGGACGTTCTGCTTGAAGGATGGTTGGAAGAGCATAAGCAGAAGAGGAAGACGAATAACTCAAAGAGTGATAGTGATGATAATGAGGAGAGAGATTTCATGGATGTGATGATTTCAATTCTAGATGGTGATGACAATGTTACTTCTACTTATGATGCTGATACTATCAATAAAGCTGTCTCCTTGACTATTATCTTAGGAGGTATAGATACTATAACCGGGACATTGACATGGATTCTGACTTTACTTCTCAACAACCGTGAAGTGCTAAAGAAGGCTCAACAAGAGTTAGACCAACATGTTGGTAGAGAGAGGCAAGTCAAGGAATCAGACACTGAAAACTTGGTTTATCTCCAAGCCGTTATCAAAGAAACCCTGCGCTTATACCCTCCTGGACCAATCCCACGGCCTGATCACGAGTCCACGGAAGACTGCGTCGTCGGTGGCTACCATATCCCAGCAAAAACTCGCCTCGTGATAAATATTTCCAAGATTCAACGTGATCCGAAGGTGTGGCCTGACCCGAATGAGTTTCGACCTGAGAGGTTTCTCACAACTCACAAGAGCGTTGATGTTAGAGGTCAGGATTTTGAGTTGATACCCTTCAGCAGTGGTAGAAGAATTTGTCCTGGAATGTATCTTGCCCTAAAGAGTATGCCTCTTCTACTCGCTTCTTTGCTTCACGGTTTTGAACTTTCGACCCTAGGGGAAGAGCCGGTTGACATGAGTGAGGCAGGGGGACTGACCAACCATAAATCTGGCAAGGTTGAAGTCTTGCTCACTCCACGCCTTCCCGCTCGACTCTATGGGCATTAG

Protein Analysis

539

Amino Acids

61.15

Weight (kDa)

9.01

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 522 1e-91 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1241
AatII GACGTC 1 cut(s) 303
AccB1I GGYRCC 1 cut(s) 356
AccBSI CCGCTC 1 cut(s) 1601
AciI CCGC 5 cut(s) 110, 120, 439, 482, 1599
AclWI GGATC 1 cut(s) 1301
AcoI YGGCCR 4 cut(s) 139, 198, 273, 313
AcsI RAATTY 3 cut(s) 535, 655, 1425
AcuI CTGAAG 2 cut(s) 355, 1393
AcyI GRCGYC 1 cut(s) 300
AdeI CACNNNGTG 1 cut(s) 184
AfaI GTAC 2 cut(s) 8, 209
AfiI CCNNNNNNNGG 2 cut(s) 137, 322
AflIII ACRYGT 1 cut(s) 1102
AgsI TTSAA 6 cut(s) 42, 821, 921, 1301, 1496, 1574
AjnI CCWGG 2 cut(s) 1195, 1432
AluBI AGCT 3 cut(s) 641, 719, 980
AluI AGCT 3 cut(s) 641, 719, 980
Alw26I GTCTC 1 cut(s) 988
AlwI GGATC 1 cut(s) 1301
AlwNI CAGNNNCTG 2 cut(s) 641, 1139
AoxI GGCC 8 cut(s) 33, 128, 139, 198, 273, 313, 1211, 1319
ApeKI GCWGC 1 cut(s) 716
ApoI RAATTY 3 cut(s) 535, 655, 1425
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
AspA2I CCTAGG 1 cut(s) 1507
AspLEI GCGC 2 cut(s) 125, 1185
AspS9I GGNCC 2 cut(s) 212, 1199
AsuC2I CCSGG 2 cut(s) 553, 1024
AsuHPI GGTGA 2 cut(s) 680, 944
AsuII TTCGAA 2 cut(s) 533, 539
AvaII GGWCC 2 cut(s) 212, 1199
AvrII CCTAGG 1 cut(s) 1507
BalI TGGCCA 1 cut(s) 275
BanI GGYRCC 1 cut(s) 356
BauI CACGAG 2 cut(s) 1220, 1277
BbsI GAAGAC 3 cut(s) 361, 860, 1239
BbvI GCAGC 1 cut(s) 728
BccI CCATC 8 cut(s) 190, 224, 226, 515, 562, 787, 819, 923
BceAI ACGGC 4 cut(s) 300, 360, 1148, 1226
BciT130I CCWGG 2 cut(s) 1197, 1434
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 2 cut(s) 553, 1024
BcoDI GTCTC 1 cut(s) 988
BfaI CTAG 4 cut(s) 126, 329, 926, 1508
BfoI RGCGCY 1 cut(s) 126
BglII AGATCT 1 cut(s) 648
BisI GCNGC 3 cut(s) 121, 483, 717
BlnI CCTAGG 1 cut(s) 1507
BlsI GCNGC 3 cut(s) 122, 484, 718
BmcAI AGTACT 1 cut(s) 8
Bme1390I CCNGG 4 cut(s) 553, 1024, 1197, 1434
Bme18I GGWCC 2 cut(s) 212, 1199
BmgT120I GGNCC 2 cut(s) 212, 1199
BmiI GGNNCC 2 cut(s) 214, 358
BmrFI CCNGG 4 cut(s) 553, 1024, 1197, 1434
BmsI GCATC 1 cut(s) 949
BpiI GAAGAC 3 cut(s) 361, 860, 1239
BplI GAGNNNNNCTC 4 cut(s) 327, 359, 1447, 1479
Bpu14I TTCGAA 2 cut(s) 533, 539
BpuEI CTTGAG 2 cut(s) 64, 769
BpuMI CCSGG 2 cut(s) 553, 1024
BsaHI GRCGYC 1 cut(s) 300
BsaJI CCNNGG 6 cut(s) 276, 343, 552, 1208, 1227, 1507
BsaXI ACNNNNNCTCC 2 cut(s) 508, 538
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 322
Bse118I RCCGGY 2 cut(s) 311, 1519
BseBI CCWGG 2 cut(s) 1197, 1434
BseDI CCNNGG 6 cut(s) 276, 343, 552, 1208, 1227, 1507
BseGI GGATG 5 cut(s) 243, 526, 618, 830, 913
BseLI CCNNNNNNNGG 2 cut(s) 137, 322
BseMII CTCAG 3 cut(s) 279, 651, 1335
BseRI GAGGAG 3 cut(s) 67, 529, 905
BseX3I CGGCCG 1 cut(s) 313
BseXI GCAGC 1 cut(s) 728
BseYI CCCAGC 2 cut(s) 641, 1261
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 8 cut(s) 35, 130, 141, 200, 275, 315, 1213, 1321
BshNI GGYRCC 1 cut(s) 356
BsiEI CGRYCG 1 cut(s) 316
BsiSI CCGG 4 cut(s) 312, 552, 1023, 1520
BslFI GGGAC 2 cut(s) 1039, 1557
BslI CCNNNNNNNGG 2 cut(s) 137, 322
BsmAI GTCTC 1 cut(s) 988
BsmFI GGGAC 2 cut(s) 1039, 1557
BsnI GGCC 8 cut(s) 35, 130, 141, 200, 275, 315, 1213, 1321
Bsp119I TTCGAA 2 cut(s) 533, 539
Bsp143I GATC 4 cut(s) 202, 648, 1216, 1306
BspACI CCGC 5 cut(s) 110, 120, 439, 482, 1599
BspANI GGCC 8 cut(s) 35, 130, 141, 200, 275, 315, 1213, 1321
BspCNI CTCAG 3 cut(s) 278, 652, 1336
BspHI TCATGA 1 cut(s) 414
BspLI GGNNCC 2 cut(s) 214, 358
BspPI GGATC 1 cut(s) 1301
BspQI GCTCTTC 2 cut(s) 828, 1509
BspT104I TTCGAA 2 cut(s) 533, 539
BspT107I GGYRCC 1 cut(s) 356
BsrBI CCGCTC 1 cut(s) 1601
BsrFI RCCGGY 2 cut(s) 311, 1519
BssAI RCCGGY 2 cut(s) 311, 1519
BssECI CCNNGG 6 cut(s) 276, 343, 552, 1208, 1227, 1507
BssMI GATC 4 cut(s) 202, 648, 1216, 1306
BssNI GRCGYC 1 cut(s) 300
BssSI CACGAG 2 cut(s) 1220, 1277
BssT1I CCWWGG 2 cut(s) 276, 1507
Bst2BI CACGAG 2 cut(s) 1220, 1277
Bst2UI CCWGG 2 cut(s) 1197, 1434
Bst4CI ACNGT 3 cut(s) 356, 1064, 1490
Bst6I CTCTTC 5 cut(s) 236, 828, 842, 1470, 1509
BstACI GRCGYC 1 cut(s) 300
BstAPI GCANNNNNTGC 1 cut(s) 722
BstBI TTCGAA 2 cut(s) 533, 539
BstC8I GCNNGC 4 cut(s) 114, 118, 313, 714
BstDEI CTNAG 4 cut(s) 265, 660, 1000, 1344
BstDSI CCRYGG 2 cut(s) 1208, 1227
BstF5I GGATG 5 cut(s) 243, 526, 618, 830, 913
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 2 cut(s) 125, 1185
BstKTI GATC 4 cut(s) 205, 651, 1219, 1309
BstMAI GTCTC 1 cut(s) 988
BstMBI GATC 4 cut(s) 202, 648, 1216, 1306
BstMCI CGRYCG 1 cut(s) 316
BstMWI GCNNNNNNNGC 2 cut(s) 122, 722
BstNI CCWGG 2 cut(s) 1197, 1434
BstNSI RCATGY 1 cut(s) 1106
BstSCI CCNGG 4 cut(s) 551, 1022, 1195, 1432
BstV1I GCAGC 1 cut(s) 728
BstV2I GAAGAC 3 cut(s) 361, 860, 1239
BstX2I RGATCY 1 cut(s) 648
BstXI CCANNNNNNTGG 2 cut(s) 1106, 1562
BstYI RGATCY 1 cut(s) 648
BstZI CGGCCG 1 cut(s) 313
BsuRI GGCC 8 cut(s) 35, 130, 141, 200, 275, 315, 1213, 1321
BtgI CCRYGG 2 cut(s) 1208, 1227
BtsCI GGATG 5 cut(s) 243, 526, 618, 830, 913
BtsI GCAGTG 2 cut(s) 732, 1420
BtsIMutI CAGTG 3 cut(s) 732, 1137, 1420
Cac8I GCNNGC 4 cut(s) 114, 118, 313, 714
CaiI CAGNNNCTG 2 cut(s) 641, 1139
CciI TCATGA 1 cut(s) 414
CfoI GCGC 2 cut(s) 125, 1185
Cfr10I RCCGGY 2 cut(s) 311, 1519
Cfr13I GGNCC 2 cut(s) 212, 1199
CseI GACGC 1 cut(s) 1228
Csp6I GTAC 2 cut(s) 7, 208
CviAII CATG 5 cut(s) 415, 904, 1035, 1103, 1528
CviQI GTAC 2 cut(s) 7, 208
DdeI CTNAG 4 cut(s) 265, 660, 1000, 1344
DpnI GATC 4 cut(s) 204, 650, 1218, 1308
DpnII GATC 4 cut(s) 202, 648, 1216, 1306
DraI TTTAAA 1 cut(s) 288
DraIII CACNNNGTG 1 cut(s) 184
DrdI GACNNNNNNGTC 1 cut(s) 1241
DseDI GACNNNNNNGTC 1 cut(s) 1241
EaeI YGGCCR 4 cut(s) 139, 198, 273, 313
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 5 cut(s) 236, 828, 842, 1470, 1509
EarI CTCTTC 5 cut(s) 236, 828, 842, 1470, 1509
EclXI CGGCCG 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 276, 1507
Eco47I GGWCC 2 cut(s) 212, 1199
Eco52I CGGCCG 1 cut(s) 313
Eco57I CTGAAG 2 cut(s) 355, 1393
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 2 cut(s) 1195, 1432
EcoT14I CCWWGG 2 cut(s) 276, 1507
ErhI CCWWGG 2 cut(s) 276, 1507
FaeI CATG 5 cut(s) 418, 907, 1038, 1106, 1531
FalI AAGNNNNNCTT 2 cut(s) 482, 514
FaqI GGGAC 2 cut(s) 1039, 1557
FatI CATG 5 cut(s) 414, 903, 1034, 1102, 1527
FauI CCCGC 1 cut(s) 1606
FbaI TGATCA 1 cut(s) 1216
Fnu4HI GCNGC 3 cut(s) 121, 483, 717
FokI GGATG 5 cut(s) 250, 533, 625, 837, 920
Fsp4HI GCNGC 3 cut(s) 121, 483, 717
FspBI CTAG 4 cut(s) 126, 329, 926, 1508
GlaI GCGC 2 cut(s) 124, 1184
GluI GCNGC 3 cut(s) 121, 483, 717
GsaI CCCAGC 2 cut(s) 645, 1265
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 8 cut(s) 35, 130, 141, 200, 275, 315, 1213, 1321
HapII CCGG 4 cut(s) 312, 552, 1023, 1520
HgaI GACGC 1 cut(s) 1228
HhaI GCGC 2 cut(s) 125, 1185
Hin1I GRCGYC 1 cut(s) 300
Hin1II CATG 5 cut(s) 418, 907, 1038, 1106, 1531
Hin6I GCGC 2 cut(s) 123, 1183
HinP1I GCGC 2 cut(s) 123, 1183
HincII GTYRAC 1 cut(s) 1525
HindII GTYRAC 1 cut(s) 1525
HinfI GANTC 9 cut(s) 467, 495, 507, 548, 1039, 1130, 1223, 1297, 1605
HpaII CCGG 4 cut(s) 312, 552, 1023, 1520
HphI GGTGA 2 cut(s) 680, 944
Hpy166II GTNNAC 3 cut(s) 808, 1227, 1525
Hpy188III TCNNGA 8 cut(s) 415, 464, 511, 748, 926, 1220, 1279, 1388
Hpy8I GTNNAC 3 cut(s) 808, 1227, 1525
Hpy99I CGWCG 3 cut(s) 356, 1244, 1247
HpyCH4III ACNGT 3 cut(s) 356, 1064, 1490
HpyCH4IV ACGT 4 cut(s) 300, 600, 810, 1303
HpyCH4V TGCA 2 cut(s) 716, 725
HpyF10VI GCNNNNNNNGC 2 cut(s) 122, 722
HpyF3I CTNAG 4 cut(s) 265, 660, 1000, 1344
HpySE526I ACGT 4 cut(s) 300, 600, 810, 1303
Hsp92I GRCGYC 1 cut(s) 300
Hsp92II CATG 5 cut(s) 418, 907, 1038, 1106, 1531
HspAI GCGC 2 cut(s) 123, 1183
KroI GCCGGC 1 cut(s) 311
KroNI GCCGGC 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 4 cut(s) 202, 648, 1216, 1306
LguI GCTCTTC 2 cut(s) 828, 1509
Lsp1109I GCAGC 1 cut(s) 728
LweI GCATC 1 cut(s) 949
MaeI CTAG 4 cut(s) 126, 329, 926, 1508
MaeII ACGT 4 cut(s) 300, 600, 810, 1303
MaeIII GTNAC 2 cut(s) 377, 943
MalI GATC 4 cut(s) 204, 650, 1218, 1308
MbiI CCGCTC 1 cut(s) 1601
MboI GATC 4 cut(s) 202, 648, 1216, 1306
MflI RGATCY 1 cut(s) 648
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 5 cut(s) 535, 655, 707, 921, 1425
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 1232, 1599
MmeI TCCRAC 2 cut(s) 738, 810
Mox20I TGGCCA 1 cut(s) 275
MroNI GCCGGC 1 cut(s) 311
MscI TGGCCA 1 cut(s) 275
MseI TTAA 3 cut(s) 287, 653, 774
MslI CAYNNNNRTG 2 cut(s) 908, 1033
Msp20I TGGCCA 1 cut(s) 275
MspI CCGG 4 cut(s) 312, 552, 1023, 1520
MspR9I CCNGG 4 cut(s) 553, 1024, 1197, 1434
MvaI CCWGG 2 cut(s) 1197, 1434
MwoI GCNNNNNNNGC 2 cut(s) 122, 722
NaeI GCCGGC 1 cut(s) 313
NciI CCSGG 2 cut(s) 553, 1024
NdeII GATC 4 cut(s) 202, 648, 1216, 1306
NgoMIV GCCGGC 1 cut(s) 311
NlaIII CATG 5 cut(s) 418, 907, 1038, 1106, 1531
NlaIV GGNNCC 2 cut(s) 214, 358
NmeAIII GCCGAG 1 cut(s) 324
NspI RCATGY 1 cut(s) 1106
NspV TTCGAA 2 cut(s) 533, 539
PagI TCATGA 1 cut(s) 414
PciI ACATGT 1 cut(s) 1102
PciSI GCTCTTC 2 cut(s) 828, 1509
PdiI GCCGGC 1 cut(s) 313
PfeI GAWTC 7 cut(s) 467, 495, 507, 548, 1039, 1130, 1297
PflFI GACNNNGTC 1 cut(s) 1238
PfoI TCCNGGA 2 cut(s) 1195, 1432
PkrI GCNGC 3 cut(s) 122, 484, 718
PleI GAGTC 2 cut(s) 1231, 1599
PpsI GAGTC 2 cut(s) 1231, 1599
PscI ACATGT 1 cut(s) 1102
Psp6I CCWGG 2 cut(s) 1195, 1432
PspFI CCCAGC 2 cut(s) 641, 1261
PspGI CCWGG 2 cut(s) 1195, 1432
PspN4I GGNNCC 2 cut(s) 214, 358
PspPI GGNCC 2 cut(s) 212, 1199
PstNI CAGNNNCTG 2 cut(s) 641, 1139
PsuI RGATCY 1 cut(s) 648
PsyI GACNNNGTC 1 cut(s) 1238
RsaI GTAC 2 cut(s) 8, 209
RsaNI GTAC 2 cut(s) 7, 208
RseI CAYNNNNRTG 2 cut(s) 908, 1033
SapI GCTCTTC 2 cut(s) 828, 1509
SaqAI TTAA 3 cut(s) 287, 653, 774
SatI GCNGC 3 cut(s) 121, 483, 717
Sau3AI GATC 4 cut(s) 202, 648, 1216, 1306
Sau96I GGNCC 2 cut(s) 212, 1199
ScaI AGTACT 1 cut(s) 8
SchI GAGTC 2 cut(s) 1232, 1599
ScrFI CCNGG 4 cut(s) 553, 1024, 1197, 1434
SfaNI GCATC 1 cut(s) 949
SfuI TTCGAA 2 cut(s) 533, 539
SinI GGWCC 2 cut(s) 212, 1199
SmiMI CAYNNNNRTG 2 cut(s) 908, 1033
SmlI CTYRAG 2 cut(s) 79, 748
SmoI CTYRAG 2 cut(s) 79, 748
Sse9I AATT 5 cut(s) 535, 655, 707, 921, 1425
SsiI CCGC 5 cut(s) 110, 120, 439, 482, 1599
SspI AATATT 2 cut(s) 48, 1288
SspMI CTAG 4 cut(s) 126, 329, 926, 1508
StyD4I CCNGG 4 cut(s) 551, 1022, 1195, 1432
StyI CCWWGG 2 cut(s) 276, 1507
TaaI ACNGT 3 cut(s) 356, 1064, 1490
TaiI ACGT 4 cut(s) 303, 603, 813, 1306
TaqI TCGA 6 cut(s) 444, 533, 539, 1339, 1502, 1603
TasI AATT 5 cut(s) 535, 655, 707, 921, 1425
TatI WGTACW 1 cut(s) 6
TauI GCSGC 2 cut(s) 123, 485
TfiI GAWTC 7 cut(s) 467, 495, 507, 548, 1039, 1130, 1297
Tru1I TTAA 3 cut(s) 287, 653, 774
Tru9I TTAA 3 cut(s) 287, 653, 774
TscAI CASTG 3 cut(s) 732, 1144, 1420
TseI GCWGC 1 cut(s) 716
TspDTI ATGAA 4 cut(s) 242, 254, 800, 892
TspGWI ACGGA 4 cut(s) 225, 383, 434, 1244
TspRI CASTG 3 cut(s) 732, 1144, 1420
Tth111I GACNNNGTC 1 cut(s) 1238
VpaK11BI GGWCC 2 cut(s) 212, 1199
XapI RAATTY 3 cut(s) 535, 655, 1425
XbaI TCTAGA 1 cut(s) 925
XceI RCATGY 1 cut(s) 1106
XcmI CCANNNNNNNNNTGG 1 cut(s) 750
XmaJI CCTAGG 1 cut(s) 1507
XspI CTAG 4 cut(s) 126, 329, 926, 1508
ZraI GACGTC 1 cut(s) 301
ZrmI AGTACT 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.