Rorug07G0281800

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
27364137 .. 27366519
2383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0281800.1

Sequence Viewer

Length: 876 bp
ATGTTAATTCTAGTAGTTGGTGGAGGTGGAATTTATTCATACGAAGATGGGATAACTGCGCTGAAGCAGTTGCCAAGAGAAAAAATTCAATTAGCCACGAAATTTGGTATTGTTGGAAGAGTGGATCCTCCTGGTATTACAGCCAAGGGTACTCCGGAGTATGTCCGCTCATGCTGTGAGGCTAGCTTGAAGCGTCTTGATGTGGACTACATTGATCTGTATTATCAACATCGGGTGGACACTTCGGTGCCTATAGAGGAAACTATGGGTGAGCTGAAGAAACTGGTGGAAGAAGGAAAAATAAAATATATCGGGTTATCTGAAGCCAGTCCAGACACCATAAGGAGGGCTCATGCAGTTCATCCCATCACGGCTCTACAAATGGAGTGGTCCCTCTGGACTCGTGATATTGAGGAAGAAATTGTTCCACTTTGCAGGGAGCTTGGCATTGGAATAGTTCCATATAGTCCTCTTGGTCGTGGGTTTTTCGGTGGGAAAGCAGTTGTGGAAAGTGTGCCTTCAAATAGTTTCGTGTCGACACATCCTCGGTTCATAGGAGAAAACTTGGAGAAGAACAAGAACATTTACAATCGCATGGAAAGCCTTGCTAAGATACACCAATGCTTTCCTGCTCAACTAGCACTAGCATGGGTTCTCCACCAAGGAGATGATGTTGTACCTATCCCCGGGACAACAAAGATTAAGAACCTGGATGCAAACATTGGCTCCTTGAAGGTGAAACTTGGGAAAGAGGACTTGAAAGAAGTTTCTGGTGCTGTACCACTCGACCAAGTCGCTGGTGACAGAACTTATGGAAGCCTGATGCCTTTGCAATGGAAATTCGCCAACACTCCGCCGAAAGAATCCAAGGTCTGA

Protein Analysis

291

Amino Acids

32.15

Weight (kDa)

6.61

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 22 - 257 1.7e-59 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 247
AccBSI CCGCTC 1 cut(s) 168
AccI GTMKAC 1 cut(s) 536
AccIII TCCGGA 1 cut(s) 154
AciI CCGC 2 cut(s) 166, 854
AclWI GGATC 2 cut(s) 119, 132
AcsI RAATTY 4 cut(s) 30, 84, 101, 839
AcuI CTGAAG 3 cut(s) 83, 296, 342
AfaI GTAC 3 cut(s) 151, 678, 780
AfiI CCNNNNNNNGG 2 cut(s) 345, 686
AgsI TTSAA 5 cut(s) 89, 190, 522, 733, 760
AjnI CCWGG 2 cut(s) 130, 708
AleI CACNNNNGTG 1 cut(s) 245
AluBI AGCT 3 cut(s) 186, 274, 442
AluI AGCT 3 cut(s) 186, 274, 442
AlwI GGATC 2 cut(s) 119, 132
Ama87I CYCGRG 1 cut(s) 686
Aor13HI TCCGGA 1 cut(s) 154
ApoI RAATTY 4 cut(s) 30, 84, 101, 839
Asp700I GAANNNNTTC 3 cut(s) 34, 84, 423
AspLEI GCGC 1 cut(s) 61
AspS9I GGNCC 1 cut(s) 390
AsuC2I CCSGG 2 cut(s) 687, 688
AsuHPI GGTGA 3 cut(s) 281, 748, 812
AsuNHI GCTAGC 1 cut(s) 182
AvaI CYCGRG 1 cut(s) 686
AvaII GGWCC 1 cut(s) 390
BamHI GGATCC 1 cut(s) 124
BanI GGYRCC 1 cut(s) 247
BanII GRGCYC 1 cut(s) 352
BauI CACGAG 1 cut(s) 402
BccI CCATC 2 cut(s) 41, 374
BceAI ACGGC 1 cut(s) 387
BciT130I CCWGG 2 cut(s) 132, 710
BcnI CCSGG 2 cut(s) 687, 688
BfaI CTAG 4 cut(s) 11, 183, 638, 644
BfmI CTRYAG 1 cut(s) 252
Bme1390I CCNGG 4 cut(s) 132, 687, 688, 710
Bme18I GGWCC 1 cut(s) 390
BmeT110I CYCGRG 1 cut(s) 686
BmgT120I GGNCC 1 cut(s) 390
BmiI GGNNCC 4 cut(s) 126, 249, 392, 727
BmrFI CCNGG 4 cut(s) 132, 687, 688, 710
BmsI GCATC 2 cut(s) 703, 813
BmtI GCTAGC 1 cut(s) 186
BpuMI CCSGG 2 cut(s) 687, 688
BsaJI CCNNGG 6 cut(s) 144, 545, 661, 685, 686, 867
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 4 cut(s) 657, 687, 710, 740
Bsc4I CCNNNNNNNGG 2 cut(s) 345, 686
Bse1I ACTGG 2 cut(s) 288, 327
Bse3DI GCAATG 1 cut(s) 839
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 2 cut(s) 132, 710
BseDI CCNNGG 6 cut(s) 144, 545, 661, 685, 686, 867
BseGI GGATG 3 cut(s) 361, 541, 718
BseLI CCNNNNNNNGG 2 cut(s) 345, 686
BseMI GCAATG 1 cut(s) 839
BseNI ACTGG 2 cut(s) 288, 327
BshNI GGYRCC 1 cut(s) 247
BsiHKCI CYCGRG 1 cut(s) 686
BsiSI CCGG 2 cut(s) 155, 687
BslFI GGGAC 2 cut(s) 376, 703
BslI CCNNNNNNNGG 2 cut(s) 345, 686
BsmFI GGGAC 2 cut(s) 376, 703
BsoBI CYCGRG 1 cut(s) 686
Bsp1286I GDGCHC 1 cut(s) 352
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 2 cut(s) 124, 214
BspACI CCGC 2 cut(s) 166, 854
BspEI TCCGGA 1 cut(s) 154
BspLI GGNNCC 4 cut(s) 126, 249, 392, 727
BspOI GCTAGC 1 cut(s) 186
BspPI GGATC 2 cut(s) 119, 132
BspT107I GGYRCC 1 cut(s) 247
BsrBI CCGCTC 1 cut(s) 168
BsrDI GCAATG 1 cut(s) 839
BsrI ACTGG 2 cut(s) 288, 327
BssECI CCNNGG 6 cut(s) 144, 545, 661, 685, 686, 867
BssMI GATC 2 cut(s) 124, 214
BssSI CACGAG 1 cut(s) 402
BssT1I CCWWGG 3 cut(s) 144, 661, 867
Bst2BI CACGAG 1 cut(s) 402
Bst2UI CCWGG 2 cut(s) 132, 710
Bst6I CTCTTC 1 cut(s) 112
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 1 cut(s) 609
BstF5I GGATG 3 cut(s) 361, 541, 718
BstHHI GCGC 1 cut(s) 61
BstKTI GATC 2 cut(s) 127, 217
BstMBI GATC 2 cut(s) 124, 214
BstMWI GCNNNNNNNGC 2 cut(s) 600, 638
BstNI CCWGG 2 cut(s) 132, 710
BstSCI CCNGG 4 cut(s) 130, 685, 686, 708
BstSFI CTRYAG 1 cut(s) 252
BstX2I RGATCY 1 cut(s) 124
BstXI CCANNNNNNTGG 1 cut(s) 797
BstYI RGATCY 1 cut(s) 124
BtsCI GGATG 3 cut(s) 361, 541, 718
Cac8I GCNNGC 1 cut(s) 184
CfoI GCGC 1 cut(s) 61
Cfr13I GGNCC 1 cut(s) 390
Cfr9I CCCGGG 1 cut(s) 686
CseI GACGC 1 cut(s) 182
Csp6I GTAC 3 cut(s) 150, 677, 779
CspCI CAANNNNNGTGG 4 cut(s) 85, 120, 368, 403
CviAII CATG 4 cut(s) 171, 353, 595, 648
CviQI GTAC 3 cut(s) 150, 677, 779
DdeI CTNAG 1 cut(s) 609
DpnI GATC 2 cut(s) 126, 216
DpnII GATC 2 cut(s) 124, 214
Eam1104I CTCTTC 1 cut(s) 112
EarI CTCTTC 1 cut(s) 112
EciI GGCGGA 1 cut(s) 843
Eco130I CCWWGG 3 cut(s) 144, 661, 867
Eco24I GRGCYC 1 cut(s) 352
Eco47I GGWCC 1 cut(s) 390
Eco57I CTGAAG 3 cut(s) 83, 296, 342
Eco88I CYCGRG 1 cut(s) 686
EcoRII CCWGG 2 cut(s) 130, 708
EcoT14I CCWWGG 3 cut(s) 144, 661, 867
EcoT38I GRGCYC 1 cut(s) 352
ErhI CCWWGG 3 cut(s) 144, 661, 867
FaeI CATG 4 cut(s) 174, 356, 598, 651
FalI AAGNNNNNCTT 2 cut(s) 502, 534
FaqI GGGAC 2 cut(s) 376, 703
FatI CATG 4 cut(s) 170, 352, 594, 647
FblI GTMKAC 1 cut(s) 536
FokI GGATG 3 cut(s) 348, 528, 725
FriOI GRGCYC 1 cut(s) 352
FspBI CTAG 4 cut(s) 11, 183, 638, 644
GlaI GCGC 1 cut(s) 60
HapII CCGG 2 cut(s) 155, 687
HgaI GACGC 1 cut(s) 182
HhaI GCGC 1 cut(s) 61
Hin1II CATG 4 cut(s) 174, 356, 598, 651
Hin6I GCGC 1 cut(s) 59
HinP1I GCGC 1 cut(s) 59
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HinfI GANTC 2 cut(s) 400, 863
HpaII CCGG 2 cut(s) 155, 687
HphI GGTGA 3 cut(s) 281, 748, 812
Hpy166II GTNNAC 3 cut(s) 205, 238, 537
Hpy188I TCNGA 2 cut(s) 322, 875
Hpy188III TCNNGA 5 cut(s) 155, 197, 332, 397, 404
Hpy8I GTNNAC 3 cut(s) 205, 238, 537
HpyAV CCTTC 3 cut(s) 287, 528, 727
HpyCH4V TGCA 4 cut(s) 356, 435, 716, 832
HpyF10VI GCNNNNNNNGC 2 cut(s) 600, 638
HpyF3I CTNAG 1 cut(s) 609
Hsp92II CATG 4 cut(s) 174, 356, 598, 651
HspAI GCGC 1 cut(s) 59
Kpn2I TCCGGA 1 cut(s) 154
Kzo9I GATC 2 cut(s) 124, 214
LmnI GCTCC 2 cut(s) 439, 731
LweI GCATC 2 cut(s) 703, 813
MaeI CTAG 4 cut(s) 11, 183, 638, 644
MaeIII GTNAC 1 cut(s) 800
MalI GATC 2 cut(s) 126, 216
MbiI CCGCTC 1 cut(s) 168
MboI GATC 2 cut(s) 124, 214
MboII GAAGA 6 cut(s) 56, 129, 289, 302, 428, 583
MflI RGATCY 1 cut(s) 124
MhlI GDGCHC 1 cut(s) 352
MluCI AATT 7 cut(s) 6, 30, 84, 89, 101, 420, 839
MlyI GAGTC 1 cut(s) 394
MmeI TCCRAC 1 cut(s) 94
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 3 cut(s) 34, 84, 423
MseI TTAA 2 cut(s) 5, 702
MslI CAYNNNNRTG 2 cut(s) 245, 646
MspI CCGG 2 cut(s) 155, 687
MspR9I CCNGG 4 cut(s) 132, 687, 688, 710
MvaI CCWGG 2 cut(s) 132, 710
MwoI GCNNNNNNNGC 2 cut(s) 600, 638
NciI CCSGG 2 cut(s) 687, 688
NdeII GATC 2 cut(s) 124, 214
NheI GCTAGC 1 cut(s) 182
NlaIII CATG 4 cut(s) 174, 356, 598, 651
NlaIV GGNNCC 4 cut(s) 126, 249, 392, 727
NmuCI GTSAC 1 cut(s) 800
OliI CACNNNNGTG 1 cut(s) 245
PdmI GAANNNNTTC 3 cut(s) 34, 84, 423
PfeI GAWTC 1 cut(s) 863
PflFI GACNNNGTC 1 cut(s) 791
PleI GAGTC 1 cut(s) 394
PpsI GAGTC 1 cut(s) 394
Psp6I CCWGG 2 cut(s) 130, 708
PspGI CCWGG 2 cut(s) 130, 708
PspN4I GGNNCC 4 cut(s) 126, 249, 392, 727
PspPI GGNCC 1 cut(s) 390
PsuI RGATCY 1 cut(s) 124
PsyI GACNNNGTC 1 cut(s) 791
RsaI GTAC 3 cut(s) 151, 678, 780
RsaNI GTAC 3 cut(s) 150, 677, 779
RseI CAYNNNNRTG 2 cut(s) 245, 646
SalI GTCGAC 1 cut(s) 535
SaqAI TTAA 2 cut(s) 5, 702
Sau3AI GATC 2 cut(s) 124, 214
Sau96I GGNCC 1 cut(s) 390
SchI GAGTC 1 cut(s) 394
ScrFI CCNGG 4 cut(s) 132, 687, 688, 710
SduI GDGCHC 1 cut(s) 352
SetI ASST 8 cut(s) 28, 188, 276, 444, 682, 711, 738, 873
SfaNI GCATC 2 cut(s) 703, 813
SfcI CTRYAG 1 cut(s) 252
SinI GGWCC 1 cut(s) 390
SmaI CCCGGG 1 cut(s) 688
SmiMI CAYNNNNRTG 2 cut(s) 245, 646
Sse9I AATT 7 cut(s) 6, 30, 84, 89, 101, 420, 839
SsiI CCGC 2 cut(s) 166, 854
SspMI CTAG 4 cut(s) 11, 183, 638, 644
StyD4I CCNGG 4 cut(s) 130, 685, 686, 708
StyI CCWWGG 3 cut(s) 144, 661, 867
TaqI TCGA 2 cut(s) 536, 786
TasI AATT 7 cut(s) 6, 30, 84, 89, 101, 420, 839
TfiI GAWTC 1 cut(s) 863
Tru1I TTAA 2 cut(s) 5, 702
Tru9I TTAA 2 cut(s) 5, 702
TseFI GTSAC 1 cut(s) 800
Tsp45I GTSAC 1 cut(s) 800
TspDTI ATGAA 3 cut(s) 27, 350, 541
TspMI CCCGGG 1 cut(s) 686
Tth111I GACNNNGTC 1 cut(s) 791
VpaK11BI GGWCC 1 cut(s) 390
XapI RAATTY 4 cut(s) 30, 84, 101, 839
XmaI CCCGGG 1 cut(s) 686
XmiI GTMKAC 1 cut(s) 536
XmnI GAANNNNTTC 3 cut(s) 34, 84, 423
XspI CTAG 4 cut(s) 11, 183, 638, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.