MD15G1028700.v1.1

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000137
Physical Location & Seq
Forward (+)
1741377 .. 1743587
2211 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1028700.v1.1.491

Sequence Viewer

Length: 1581 bp
ATGGATTCTCTCCCATATGTAAACTCTATCACTGCTGGCTTGTTCACAGTAATCATCGTGTTCTATTACTTGTCACGAAGATGGAGAGCTGCAAATCACAAGCGCAAATTATCACCACCTGAAGCCAAGGGCGGTTGGCCTATATTTGGTCACCTTCCTTTGTTTGGAGGCTCCATACCTCCTCACTTAACTTTGGGAGCCATGGCGGACAAGTACGGACCCATTTTCACTATCCGCCTTGGCGTCCATCCGTCGTTGGTGATAAGCAGCAGTGAGATCGCAAAAGAATGCTTCACAACCAAAGACTTGAGCATAATCTCACGCCCAAGGATGGTGGTTCTAGACCACGTTAGCTACGACTACGCCATGTTTGGGTTCGGACCAGGTGGACCCTTTTGGCGAGAAATTCGCAAGCTAGTCACCTTGGAGTTGCTCTCAGTCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGTGTCGGAAGTGGCTACTTTCTTAAAAGAATTGCACGAACTTTGGAGTACAAAGAAAAAGGAGGGCTCGAAAGATGGAGTGGTTGTAGAGCTAAAGCAATGGCTTGGGGACATGACGCTGAACGTGATTCTTACAATGGTGGCCGGAAAGCGGTATTCCGTGGCTGCCGCTGGGGATGAGAAGAAAGAAGCGCGTAAGGTTCAGACTGCATTGAGGGAGTTATTTGATTATCTGGGCATGTTTTTGCTGGGTGATGCGGTTCCTTATCTGCGGTGGTTGGATTGGGGTGGACATGAGAAGGCAATGAAGAAAAGTGCAACGGAAATGCACGCCATTGTTGAAGAGTGGGTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGATGCAAAAGGAGAACAGGACTTCATAGATGCGATGCTCTCTGTGCTTGATGGTGCAGACCTTGGCAATTTTGATGCTGATACGATCGTCAAAGCCACAAGCTTGAATGTTATTGCAGGAGGTGGCGACACCACCATGGTGACATTGACCTGGGCAATATCGTTATTGCTGAACAACCCTCACGTTATGAAAAAAGCCCTAAATGAACTAGACATCAAAATAGGCAGACAAAGAGTTGTGAGTGAGGAAGATTTAAGCAACTTGGTCTACCTCCAAGCTATTGTGAAGGAGACGTTACGTTTGTACCCAGTAGGACCATTAGCAGGGCCACGTATGTTCAATGAAGATTGCACCATTGCTGGCTACCATATTCGAAAGGGCACCCGCTTCTTCCCAAACCTCTGGAAGATCCAAATTGACCCGAAAAATTGGCCCGAGCCACTTGAGTTCAAGCCAGAGAGATTTCTTACGACGCACAAGGACATTGATCTGAGGGGTCAACATTTTGAGCTTATTCCTTTTGGAAGTGGTAGAAGATCATGCCCTGGTTTGGCATTTGGCCTTCAAATGGTGCAATTTACATTGGCTAGTTTTCTACATGCGTTTGAAATCTCAAACCCATCAAGTGCCCCAGTTGATATGACAGAGAGTTTTGGAATGACCAACGTTAGGGCAGCTCCACTCAACGTTCTCATCAAACCTCGCTTATCTTCTGAACTCTATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

527

Amino Acids

59.04

Weight (kDa)

8.91

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 505 6.7e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1232
AccI GTMKAC 1 cut(s) 1119
AccII CGCG 1 cut(s) 664
AccIII TCCGGA 1 cut(s) 441
AciI CCGC 8 cut(s) 132, 206, 235, 622, 639, 728, 742, 1237
AclI AACGTT 2 cut(s) 1518, 1539
AclWI GGATC 1 cut(s) 1255
AcoI YGGCCR 1 cut(s) 612
AcsI RAATTY 1 cut(s) 405
AcuI CTGAAG 1 cut(s) 141
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 3 cut(s) 215, 520, 1157
AfiI CCNNNNNNNGG 9 cut(s) 146, 164, 331, 372, 621, 1175, 1402, 1420, 1521
AgsI TTSAA 7 cut(s) 812, 824, 958, 1192, 1303, 1418, 1460
AjnI CCWGG 3 cut(s) 382, 1001, 1396
AleI CACNNNNGTG 1 cut(s) 989
AluBI AGCT 9 cut(s) 89, 354, 415, 454, 562, 954, 1130, 1363, 1529
AluI AGCT 9 cut(s) 89, 354, 415, 454, 562, 954, 1130, 1363, 1529
Alw26I GTCTC 1 cut(s) 1136
AlwI GGATC 1 cut(s) 1255
Ama87I CYCGRG 1 cut(s) 1286
Aor13HI TCCGGA 1 cut(s) 441
AoxI GGCC 5 cut(s) 137, 612, 1178, 1283, 1411
ApeKI GCWGC 5 cut(s) 89, 267, 454, 635, 1526
ApoI RAATTY 1 cut(s) 405
ArsI GACNNNNNNTTYG 2 cut(s) 1135, 1167
AspLEI GCGC 2 cut(s) 105, 664
AspS9I GGNCC 6 cut(s) 218, 380, 389, 1166, 1178, 1284
AsuHPI GGTGA 7 cut(s) 105, 143, 271, 412, 734, 863, 1003
AsuII TTCGAA 1 cut(s) 1225
AvaI CYCGRG 1 cut(s) 1286
AvaII GGWCC 4 cut(s) 218, 380, 389, 1166
BaeGI GKGCMC 2 cut(s) 1235, 1483
BaeI ACNNNNGTAYC 4 cut(s) 924, 957, 1139, 1172
BanI GGYRCC 1 cut(s) 1232
BanII GRGCYC 1 cut(s) 539
BbvI GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BccI CCATC 6 cut(s) 75, 255, 325, 539, 896, 1480
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 3 cut(s) 384, 1003, 1398
BcoDI GTCTC 1 cut(s) 1136
BfaI CTAG 4 cut(s) 341, 416, 1061, 1440
BisI GCNGC 6 cut(s) 90, 268, 455, 636, 639, 1527
BlsI GCNGC 6 cut(s) 91, 269, 456, 637, 640, 1528
Bme1390I CCNGG 3 cut(s) 384, 1003, 1398
Bme18I GGWCC 4 cut(s) 218, 380, 389, 1166
BmeT110I CYCGRG 1 cut(s) 1286
BmgT120I GGNCC 6 cut(s) 218, 380, 389, 1166, 1178, 1284
BmiI GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
BmrFI CCNGG 3 cut(s) 384, 1003, 1398
BmrI ACTGGG 2 cut(s) 1154, 1478
BmsI GCATC 5 cut(s) 715, 844, 871, 876, 916
BmuI ACTGGG 2 cut(s) 1154, 1478
BplI GAGNNNNNCTC 2 cut(s) 419, 451
Bpu14I TTCGAA 1 cut(s) 1225
BpuEI CTTGAG 3 cut(s) 328, 443, 1316
BsaAI YACGTR 1 cut(s) 1184
BsaHI GRCGYC 1 cut(s) 243
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 540, 570
Bsc4I CCNNNNNNNGG 9 cut(s) 146, 164, 331, 372, 621, 1175, 1402, 1420, 1521
Bse1I ACTGG 2 cut(s) 1160, 1484
Bse3DI GCAATG 3 cut(s) 575, 780, 1206
BseAI TCCGGA 1 cut(s) 441
BseBI CCWGG 3 cut(s) 384, 1003, 1398
BseGI GGATG 3 cut(s) 247, 336, 652
BseLI CCNNNNNNNGG 9 cut(s) 146, 164, 331, 372, 621, 1175, 1402, 1420, 1521
BseMI GCAATG 3 cut(s) 575, 780, 1206
BseMII CTCAG 2 cut(s) 450, 1334
BseNI ACTGG 2 cut(s) 1160, 1484
BseRI GAGGAG 2 cut(s) 171, 853
BseSI GKGCMC 2 cut(s) 1235, 1483
BseXI GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BseYI CCCAGC 2 cut(s) 641, 718
BsgI GTGCAG 1 cut(s) 927
Bsh1236I CGCG 1 cut(s) 664
Bsh1285I CGRYCG 1 cut(s) 939
BshFI GGCC 5 cut(s) 139, 614, 1180, 1285, 1413
BshNI GGYRCC 1 cut(s) 1232
BsiEI CGRYCG 1 cut(s) 939
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 2 cut(s) 442, 615
BslFI GGGAC 1 cut(s) 593
BslI CCNNNNNNNGG 9 cut(s) 146, 164, 331, 372, 621, 1175, 1402, 1420, 1521
BsmAI GTCTC 1 cut(s) 1136
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 1 cut(s) 593
BsmI GAATGC 1 cut(s) 293
BsnI GGCC 5 cut(s) 139, 614, 1180, 1285, 1413
BsoBI CYCGRG 1 cut(s) 1286
Bsp119I TTCGAA 1 cut(s) 1225
Bsp1286I GDGCHC 3 cut(s) 539, 1235, 1483
Bsp13I TCCGGA 1 cut(s) 441
Bsp143I GATC 5 cut(s) 276, 936, 1260, 1339, 1388
Bsp19I CCATGG 2 cut(s) 201, 987
BspACI CCGC 8 cut(s) 132, 206, 235, 622, 639, 728, 742, 1237
BspANI GGCC 5 cut(s) 139, 614, 1180, 1285, 1413
BspCNI CTCAG 2 cut(s) 449, 1335
BspEI TCCGGA 1 cut(s) 441
BspFNI CGCG 1 cut(s) 664
BspLI GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
BspPI GGATC 1 cut(s) 1255
BspQI GCTCTTC 1 cut(s) 819
BspT104I TTCGAA 1 cut(s) 1225
BspT107I GGYRCC 1 cut(s) 1232
BsrDI GCAATG 3 cut(s) 575, 780, 1206
BsrI ACTGG 2 cut(s) 1160, 1484
BssMI GATC 5 cut(s) 276, 936, 1260, 1339, 1388
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 7 cut(s) 126, 201, 238, 326, 423, 913, 987
Bst2UI CCWGG 3 cut(s) 384, 1003, 1398
Bst4CI ACNGT 1 cut(s) 49
Bst6I CTCTTC 2 cut(s) 807, 819
BstACI GRCGYC 1 cut(s) 243
BstBAI YACGTR 1 cut(s) 1184
BstBI TTCGAA 1 cut(s) 1225
BstC8I GCNNGC 4 cut(s) 37, 413, 801, 1213
BstDEI CTNAG 2 cut(s) 436, 1343
BstDSI CCRYGG 3 cut(s) 201, 630, 987
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 3 cut(s) 247, 336, 652
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 2 cut(s) 105, 664
BstKTI GATC 5 cut(s) 279, 939, 1263, 1342, 1391
BstMAI GTCTC 1 cut(s) 1136
BstMBI GATC 5 cut(s) 276, 936, 1260, 1339, 1388
BstMCI CGRYCG 1 cut(s) 939
BstMWI GCNNNNNNNGC 2 cut(s) 460, 895
BstNI CCWGG 3 cut(s) 384, 1003, 1398
BstNSI RCATGY 2 cut(s) 712, 1454
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 3 cut(s) 382, 1001, 1396
BstSLI GKGCMC 2 cut(s) 1235, 1483
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 5 cut(s) 76, 279, 441, 622, 1538
BstX2I RGATCY 1 cut(s) 1260
BstXI CCANNNNNNTGG 1 cut(s) 1254
BstYI RGATCY 1 cut(s) 1260
BsuRI GGCC 5 cut(s) 139, 614, 1180, 1285, 1413
BtgI CCRYGG 3 cut(s) 201, 630, 987
BtgZI GCGATG 1 cut(s) 899
BtsCI GGATG 3 cut(s) 247, 336, 652
BtsI GCAGTG 2 cut(s) 30, 277
BtsIMutI CAGTG 2 cut(s) 30, 277
Cac8I GCNNGC 4 cut(s) 37, 413, 801, 1213
CfoI GCGC 2 cut(s) 105, 664
Cfr13I GGNCC 6 cut(s) 218, 380, 389, 1166, 1178, 1284
CseI GACGC 3 cut(s) 232, 595, 1333
CsiI ACCWGGT 1 cut(s) 382
Csp6I GTAC 3 cut(s) 214, 519, 1156
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviAII CATG 8 cut(s) 202, 367, 583, 709, 764, 988, 1392, 1451
CviQI GTAC 3 cut(s) 214, 519, 1156
DdeI CTNAG 2 cut(s) 436, 1343
DpnI GATC 5 cut(s) 278, 938, 1262, 1341, 1390
DpnII GATC 5 cut(s) 276, 936, 1260, 1339, 1388
EaeI YGGCCR 1 cut(s) 612
Eam1104I CTCTTC 2 cut(s) 807, 819
EarI CTCTTC 2 cut(s) 807, 819
EciI GGCGGA 2 cut(s) 221, 224
Eco130I CCWWGG 7 cut(s) 126, 201, 238, 326, 423, 913, 987
Eco24I GRGCYC 1 cut(s) 539
Eco47I GGWCC 4 cut(s) 218, 380, 389, 1166
Eco57I CTGAAG 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 1286
Eco91I GGTNACC 1 cut(s) 149
EcoO65I GGTNACC 1 cut(s) 149
EcoRII CCWGG 3 cut(s) 382, 1001, 1396
EcoT14I CCWWGG 7 cut(s) 126, 201, 238, 326, 423, 913, 987
EcoT38I GRGCYC 1 cut(s) 539
ErhI CCWWGG 7 cut(s) 126, 201, 238, 326, 423, 913, 987
Esp3I CGTCTC 1 cut(s) 1136
FaeI CATG 8 cut(s) 205, 370, 586, 712, 767, 991, 1395, 1454
FaqI GGGAC 1 cut(s) 593
FatI CATG 8 cut(s) 201, 366, 582, 708, 763, 987, 1391, 1450
FauI CCCGC 1 cut(s) 1244
FauNDI CATATG 1 cut(s) 16
FblI GTMKAC 1 cut(s) 1119
Fnu4HI GCNGC 6 cut(s) 90, 268, 455, 636, 639, 1527
FokI GGATG 3 cut(s) 234, 343, 659
FriOI GRGCYC 1 cut(s) 539
Fsp4HI GCNGC 6 cut(s) 90, 268, 455, 636, 639, 1527
FspBI CTAG 4 cut(s) 341, 416, 1061, 1440
GlaI GCGC 2 cut(s) 104, 663
GluI GCNGC 6 cut(s) 90, 268, 455, 636, 639, 1527
GsaI CCCAGC 2 cut(s) 645, 722
HaeIII GGCC 5 cut(s) 139, 614, 1180, 1285, 1413
HapII CCGG 2 cut(s) 442, 615
HgaI GACGC 3 cut(s) 232, 595, 1333
HhaI GCGC 2 cut(s) 105, 664
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 8 cut(s) 205, 370, 586, 712, 767, 991, 1395, 1454
Hin6I GCGC 2 cut(s) 103, 662
HinP1I GCGC 2 cut(s) 103, 662
HincII GTYRAC 1 cut(s) 1352
HindII GTYRAC 1 cut(s) 1352
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 2 cut(s) 5, 598
HpaII CCGG 2 cut(s) 442, 615
HphI GGTGA 7 cut(s) 105, 143, 271, 412, 734, 863, 1003
Hpy166II GTNNAC 6 cut(s) 22, 45, 389, 761, 1120, 1352
Hpy188I TCNGA 5 cut(s) 380, 478, 675, 1344, 1567
Hpy188III TCNNGA 4 cut(s) 75, 341, 442, 1255
Hpy8I GTNNAC 6 cut(s) 22, 45, 389, 761, 1120, 1352
Hpy99I CGWCG 2 cut(s) 256, 1327
HpyAV CCTTC 5 cut(s) 164, 439, 763, 1132, 1424
HpyCH4III ACNGT 1 cut(s) 49
HpyCH4IV ACGT 8 cut(s) 348, 594, 1035, 1145, 1150, 1183, 1518, 1539
HpyF10VI GCNNNNNNNGC 2 cut(s) 460, 895
HpyF3I CTNAG 2 cut(s) 436, 1343
HpySE526I ACGT 8 cut(s) 348, 594, 1035, 1145, 1150, 1183, 1518, 1539
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 8 cut(s) 205, 370, 586, 712, 767, 991, 1395, 1454
HspAI GCGC 2 cut(s) 103, 662
Kpn2I TCCGGA 1 cut(s) 441
Kzo9I GATC 5 cut(s) 276, 936, 1260, 1339, 1388
LguI GCTCTTC 1 cut(s) 819
LmnI GCTCC 3 cut(s) 176, 197, 1534
Lsp1109I GCAGC 5 cut(s) 76, 279, 441, 622, 1538
LweI GCATC 5 cut(s) 715, 844, 871, 876, 916
MabI ACCWGGT 1 cut(s) 382
MaeI CTAG 4 cut(s) 341, 416, 1061, 1440
MaeII ACGT 8 cut(s) 348, 594, 1035, 1145, 1150, 1183, 1518, 1539
MaeIII GTNAC 5 cut(s) 72, 149, 418, 991, 1146
MalI GATC 5 cut(s) 278, 938, 1262, 1341, 1390
MboI GATC 5 cut(s) 276, 936, 1260, 1339, 1388
MflI RGATCY 1 cut(s) 1260
MhlI GDGCHC 3 cut(s) 539, 1235, 1483
MluCI AATT 7 cut(s) 107, 405, 500, 919, 1266, 1279, 1427
MmeI TCCRAC 2 cut(s) 456, 729
MroI TCCGGA 1 cut(s) 441
MseI TTAA 3 cut(s) 188, 494, 1106
MslI CAYNNNNRTG 4 cut(s) 79, 470, 986, 989
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 2 cut(s) 442, 615
MspR9I CCNGG 3 cut(s) 384, 1003, 1398
Mva1269I GAATGC 1 cut(s) 293
MvaI CCWGG 3 cut(s) 384, 1003, 1398
MvnI CGCG 1 cut(s) 664
MwoI GCNNNNNNNGC 2 cut(s) 460, 895
NcoI CCATGG 2 cut(s) 201, 987
NdeI CATATG 1 cut(s) 16
NdeII GATC 5 cut(s) 276, 936, 1260, 1339, 1388
NlaIII CATG 8 cut(s) 205, 370, 586, 712, 767, 991, 1395, 1454
NlaIV GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
NmuCI GTSAC 4 cut(s) 72, 149, 418, 991
NspI RCATGY 2 cut(s) 712, 1454
NspV TTCGAA 1 cut(s) 1225
OliI CACNNNNGTG 1 cut(s) 989
PciSI GCTCTTC 1 cut(s) 819
PcsI WCGNNNNNNNCGW 1 cut(s) 354
PctI GAATGC 1 cut(s) 293
PfeI GAWTC 2 cut(s) 5, 598
PkrI GCNGC 6 cut(s) 91, 269, 456, 637, 640, 1528
Ple19I CGATCG 1 cut(s) 939
Ppu21I YACGTR 1 cut(s) 1184
Psp1406I AACGTT 2 cut(s) 1518, 1539
Psp6I CCWGG 3 cut(s) 382, 1001, 1396
PspEI GGTNACC 1 cut(s) 149
PspFI CCCAGC 2 cut(s) 641, 718
PspGI CCWGG 3 cut(s) 382, 1001, 1396
PspN4I GGNNCC 6 cut(s) 172, 199, 220, 391, 732, 1234
PspPI GGNCC 6 cut(s) 218, 380, 389, 1166, 1178, 1284
PsuI RGATCY 1 cut(s) 1260
PvuI CGATCG 1 cut(s) 939
RsaI GTAC 3 cut(s) 215, 520, 1157
RsaNI GTAC 3 cut(s) 214, 519, 1156
RseI CAYNNNNRTG 4 cut(s) 79, 470, 986, 989
SapI GCTCTTC 1 cut(s) 819
SaqAI TTAA 3 cut(s) 188, 494, 1106
SatI GCNGC 6 cut(s) 90, 268, 455, 636, 639, 1527
Sau3AI GATC 5 cut(s) 276, 936, 1260, 1339, 1388
Sau96I GGNCC 6 cut(s) 218, 380, 389, 1166, 1178, 1284
ScrFI CCNGG 3 cut(s) 384, 1003, 1398
SduI GDGCHC 3 cut(s) 539, 1235, 1483
SexAI ACCWGGT 1 cut(s) 382
SfaNI GCATC 5 cut(s) 715, 844, 871, 876, 916
SfuI TTCGAA 1 cut(s) 1225
SinI GGWCC 4 cut(s) 218, 380, 389, 1166
SmiMI CAYNNNNRTG 4 cut(s) 79, 470, 986, 989
SmlI CTYRAG 3 cut(s) 307, 458, 1295
SmoI CTYRAG 3 cut(s) 307, 458, 1295
Sse9I AATT 7 cut(s) 107, 405, 500, 919, 1266, 1279, 1427
SsiI CCGC 8 cut(s) 132, 206, 235, 622, 639, 728, 742, 1237
SspMI CTAG 4 cut(s) 341, 416, 1061, 1440
StyD4I CCNGG 3 cut(s) 382, 1001, 1396
StyI CCWWGG 7 cut(s) 126, 201, 238, 326, 423, 913, 987
TaaI ACNGT 1 cut(s) 49
TaiI ACGT 8 cut(s) 351, 597, 1038, 1148, 1153, 1186, 1521, 1542
TaqI TCGA 3 cut(s) 469, 539, 1225
TasI AATT 7 cut(s) 107, 405, 500, 919, 1266, 1279, 1427
TatI WGTACW 1 cut(s) 518
TauI GCSGC 1 cut(s) 641
TfiI GAWTC 2 cut(s) 5, 598
Tru1I TTAA 3 cut(s) 188, 494, 1106
Tru9I TTAA 3 cut(s) 188, 494, 1106
TscAI CASTG 2 cut(s) 37, 277
TseFI GTSAC 4 cut(s) 72, 149, 418, 991
TseI GCWGC 5 cut(s) 89, 267, 454, 635, 1526
Tsp45I GTSAC 4 cut(s) 72, 149, 418, 991
TspDTI ATGAA 5 cut(s) 791, 865, 1055, 1071, 1209
TspGWI ACGGA 4 cut(s) 231, 240, 619, 806
TspRI CASTG 2 cut(s) 37, 277
VpaK11BI GGWCC 4 cut(s) 218, 380, 389, 1166
XapI RAATTY 1 cut(s) 405
XbaI TCTAGA 1 cut(s) 340
XceI RCATGY 2 cut(s) 712, 1454
XmiI GTMKAC 1 cut(s) 1119
XspI CTAG 4 cut(s) 341, 416, 1061, 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.