Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Reverse (-)

1907481 .. 1910347

Gene Structure 2867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g03090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGATTCCCTCCCTTATGCAAACTCCATCGCTGCTGGATTATTCACAATAATCATCGTGTCCTATTACTTATCACGAAGATGGAGAGCTGCCGATTCCACGGGCTCCCCACCTGAAGCCAAGGGTGCGTGGCCTATATTGGGTCACCTTCCTTTGTTAGGGGGCTCCACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTACGGACCCATTTTCACCATCCGAATTGGCGTCTATCCGTCGTTGGTGATAAGCAGCAGTGAGATCGCAAAAGAATGCTTCACAACCAATGACTTGAGCCTAAACTCGCGCCCAAAGATGGCGGCTGTAGAGCACATTGGCTACAACTACGCCATGTTTGGGTTCGGACCATCTGGACCCTATTGGCGAGAAATTCGCAAGATCGTCACGTTGGAGTTGCTCTCAATCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGTATTGGAAGTGACTACTTTCTTGGAAGAATTGCACAAAACTTGGAGTACAAGACAAAAGGAGGGCTCGAATGATGGAGTGGTTGTAGAGCTGAAGCAATGGTTTGGGGACATGACGCTGAACGTGCTTGTCAGAATGGTGAACGGAAAGCGGTATTCAGTAGCTGCCGATGAGGATGAGAAGAAAGAAGCGCGTAGGGTTCAGAATGCATTGAGGGAGTTTTTTCATTATGCGGGACTGTTTTTGGTGGGTGATGCGGTTCCTTATCTGCGGTGGTTGGATTTGGGTGGACATGAGAAGGCAATAAAGAAAATTGCGAAGGAATTGGACACCATTGTTGGCGAGTGGGTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGATGCAAAAGGAGAGCAGGACTTCATAGATGCGATGCTTTCTGTGCTTGATGGTGCAGAACTTGGCGGTTTTGATGCTGATACGATCAACAAAGCCACAAGCTTGAATATGATTGCAGCAGGTAGCGATACCATCATGGTGATATTGACATGGGCAATATCGTTATTGTTGAACAACTCGCACGTTTTGGAAAGAGCCTTAGACGAACTGGACACCAAAATAGGTAGACAAAGAGTTGTGAGTGAGCAAGATCTAAGCAACTTAGTCTACATCCAAGCTATTATAAAGGAGACGTTACGTTTGTACCCACCAGCACCATTATCAGGACCACGTGAGTTAATTGAGGATTGCACCATTGCTGGGTACCATATCAGAAAAGGCACCCGGTTAACCATGAACCTCTGGAAGCTCCAAACTGACCCGAAAAATTGGCCCAAGCCATTTGAGTTCAAGCCAGAAAGATTTCTTACCACCCACAAGAAAGTTGATGTGAAGGGTCAACACTTTGAGTTGATTCCGTTTGGAAGTGGTAGAAGGGCATGCCCTGGTTTGGCATTTGGCCTTCAAATGGTGCAATTTACGTTGGCTAGTTTTCTACATGCGTTTGAAATCTTGAACCCGTCAAGTACACCAATTGATATGACGGAGAGCTTTGGATTAACCAACAATAAGAGAACTCCACTCAAAGTTCTCATCAAACCTCGTTTGTCTTCTGAACTTTATGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

525

Amino Acids

58.77

Weight (kDa)

8.65

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1130
Acc36I	ACCTGC	1 cut(s)	956
Acc65I	GGTACC	1 cut(s)	1209
AccB1I	GGYRCC	2 cut(s)	1209, 1226
AccI	GTMKAC	2 cut(s)	1072, 1113
AccII	CGCG	2 cut(s)	316, 658
AccIII	TCCGGA	1 cut(s)	435
AciI	CCGC	7 cut(s)	200, 329, 616, 698, 722, 736, 912
AcsI	RAATTY	1 cut(s)	399
AcuI	CTGAAG	2 cut(s)	135, 578
AcvI	CACGTG	1 cut(s)	1178
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	5 cut(s)	209, 514, 1151, 1211, 1474
AfiI	CCNNNNNNNGG	8 cut(s)	140, 158, 325, 366, 1169, 1206, 1396, 1414
AgsI	TTSAA	7 cut(s)	818, 952, 1018, 1297, 1412, 1454, 1462
AjnI	CCWGG	1 cut(s)	1390
AluBI	AGCT	8 cut(s)	89, 448, 556, 629, 948, 1124, 1255, 1497
AluI	AGCT	8 cut(s)	89, 448, 556, 629, 948, 1124, 1255, 1497
Alw21I	GWGCWC	1 cut(s)	342
Alw26I	GTCTC	1 cut(s)	1130
AlwNI	CAGNNNCTG	1 cut(s)	629
Aor13HI	TCCGGA	1 cut(s)	435
AoxI	GGCC	3 cut(s)	131, 1277, 1405
ApeKI	GCWGC	6 cut(s)	32, 89, 261, 448, 629, 962
ApoI	RAATTY	1 cut(s)	399
ArsI	GACNNNNNNTTYG	2 cut(s)	1129, 1161
Asp700I	GAANNNNTTC	1 cut(s)	1308
Asp718I	GGTACC	1 cut(s)	1209
AspLEI	GCGC	2 cut(s)	318, 658
AspS9I	GGNCC	5 cut(s)	212, 374, 383, 1172, 1278
AsuC2I	CCSGG	1 cut(s)	1231
AsuHPI	GGTGA	7 cut(s)	137, 214, 265, 616, 728, 857, 997
AvaII	GGWCC	4 cut(s)	212, 374, 383, 1172
BaeI	ACNNNNGTAYC	2 cut(s)	1133, 1166
BanI	GGYRCC	2 cut(s)	1209, 1226
BanII	GRGCYC	3 cut(s)	107, 167, 533
BbrPI	CACGTG	1 cut(s)	1178
BbsI	GAAGAC	1 cut(s)	1548
Bbv12I	GWGCWC	1 cut(s)	342
BbvI	GCAGC	6 cut(s)	19, 76, 273, 435, 616, 974
BccI	CCATC	8 cut(s)	35, 75, 233, 319, 385, 533, 890, 986
BcgI	CGANNNNNNTGC	2 cut(s)	253, 287
BciT130I	CCWGG	1 cut(s)	1392
BcnI	CCSGG	1 cut(s)	1231
BcoDI	GTCTC	1 cut(s)	1130
BfaI	CTAG	1 cut(s)	1434
BfmI	CTRYAG	1 cut(s)	333
BfuAI	ACCTGC	1 cut(s)	956
BglII	AGATCT	1 cut(s)	1096
BisI	GCNGC	7 cut(s)	33, 90, 262, 330, 449, 630, 963
BlsI	GCNGC	7 cut(s)	34, 91, 263, 331, 450, 631, 964
Bme1390I	CCNGG	2 cut(s)	1231, 1392
Bme18I	GGWCC	4 cut(s)	212, 374, 383, 1172
BmgT120I	GGNCC	5 cut(s)	212, 374, 383, 1172, 1278
BmiI	GGNNCC	8 cut(s)	106, 166, 193, 214, 385, 726, 1211, 1228
BmrFI	CCNGG	2 cut(s)	1231, 1392
BmsI	GCATC	5 cut(s)	709, 838, 865, 870, 910
BpiI	GAAGAC	1 cut(s)	1548
BplI	GAGNNNNNCTC	2 cut(s)	413, 445
BpuEI	CTTGAG	2 cut(s)	322, 437
BpuMI	CCSGG	1 cut(s)	1231
BsaAI	YACGTR	1 cut(s)	1178
BsaHI	GRCGYC	1 cut(s)	237
BsaJI	CCNNGG	4 cut(s)	99, 120, 195, 1390
BsaWI	WCCGGW	1 cut(s)	435
BsaXI	ACNNNNNCTCC	2 cut(s)	534, 564
Bsc4I	CCNNNNNNNGG	8 cut(s)	140, 158, 325, 366, 1169, 1206, 1396, 1414
Bse1I	ACTGG	1 cut(s)	1059
Bse3DI	GCAATG	2 cut(s)	569, 1200
BseAI	TCCGGA	1 cut(s)	435
BseBI	CCWGG	1 cut(s)	1392
BseDI	CCNNGG	4 cut(s)	99, 120, 195, 1390
BseGI	GGATG	3 cut(s)	225, 646, 1116
BseLI	CCNNNNNNNGG	8 cut(s)	140, 158, 325, 366, 1169, 1206, 1396, 1414
BseMI	GCAATG	2 cut(s)	569, 1200
BseNI	ACTGG	1 cut(s)	1059
BseRI	GAGGAG	2 cut(s)	165, 847
BseXI	GCAGC	6 cut(s)	19, 76, 273, 435, 616, 974
BseYI	CCCAGC	1 cut(s)	1205
BsgI	GTGCAG	1 cut(s)	921
Bsh1236I	CGCG	2 cut(s)	316, 658
BshFI	GGCC	3 cut(s)	133, 1279, 1407
BshNI	GGYRCC	2 cut(s)	1209, 1226
BsiHKAI	GWGCWC	1 cut(s)	342
BsiSI	CCGG	2 cut(s)	436, 1231
BslFI	GGGAC	2 cut(s)	587, 714
BslI	CCNNNNNNNGG	8 cut(s)	140, 158, 325, 366, 1169, 1206, 1396, 1414
BsmAI	GTCTC	1 cut(s)	1130
BsmBI	CGTCTC	1 cut(s)	1130
BsmFI	GGGAC	2 cut(s)	587, 714
BsmI	GAATGC	2 cut(s)	287, 676
BsnI	GGCC	3 cut(s)	133, 1279, 1407
Bsp1286I	GDGCHC	4 cut(s)	107, 167, 342, 533
Bsp13I	TCCGGA	1 cut(s)	435
Bsp143I	GATC	4 cut(s)	270, 408, 930, 1096
Bsp19I	CCATGG	1 cut(s)	195
BspACI	CCGC	7 cut(s)	200, 329, 616, 698, 722, 736, 912
BspANI	GGCC	3 cut(s)	133, 1279, 1407
BspEI	TCCGGA	1 cut(s)	435
BspFNI	CGCG	2 cut(s)	316, 658
BspLI	GGNNCC	8 cut(s)	106, 166, 193, 214, 385, 726, 1211, 1228
BspMI	ACCTGC	1 cut(s)	956
BspQI	GCTCTTC	1 cut(s)	813
BspT107I	GGYRCC	2 cut(s)	1209, 1226
BsrDI	GCAATG	2 cut(s)	569, 1200
BsrI	ACTGG	1 cut(s)	1059
BssECI	CCNNGG	4 cut(s)	99, 120, 195, 1390
BssMI	GATC	4 cut(s)	270, 408, 930, 1096
BssNI	GRCGYC	1 cut(s)	237
BssT1I	CCWWGG	2 cut(s)	120, 195
Bst2UI	CCWGG	1 cut(s)	1392
Bst4CI	ACNGT	1 cut(s)	705
Bst6I	CTCTTC	1 cut(s)	813
BstACI	GRCGYC	1 cut(s)	237
BstBAI	YACGTR	1 cut(s)	1178
BstC8I	GCNNGC	1 cut(s)	1387
BstDEI	CTNAG	3 cut(s)	1045, 1100, 1108
BstDSI	CCRYGG	2 cut(s)	99, 195
BstEII	GGTNACC	1 cut(s)	143
BstENI	CCTNNNNNAGG	1 cut(s)	156
BstF5I	GGATG	3 cut(s)	225, 646, 1116
BstFNI	CGCG	2 cut(s)	316, 658
BstHHI	GCGC	2 cut(s)	318, 658
BstKTI	GATC	4 cut(s)	273, 411, 933, 1099
BstMAI	GTCTC	1 cut(s)	1130
BstMBI	GATC	4 cut(s)	270, 408, 930, 1096
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 454, 589, 889
BstNI	CCWGG	1 cut(s)	1392
BstNSI	RCATGY	2 cut(s)	1389, 1448
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	2 cut(s)	1229, 1390
BstSFI	CTRYAG	1 cut(s)	333
BstUI	CGCG	2 cut(s)	316, 658
BstV1I	GCAGC	6 cut(s)	19, 76, 273, 435, 616, 974
BstV2I	GAAGAC	1 cut(s)	1548
BstX2I	RGATCY	1 cut(s)	1096
BstYI	RGATCY	1 cut(s)	1096
BsuRI	GGCC	3 cut(s)	133, 1279, 1407
BtgI	CCRYGG	2 cut(s)	99, 195
BtgZI	GCGATG	2 cut(s)	13, 893
BtsCI	GGATG	3 cut(s)	225, 646, 1116
BtsI	GCAGTG	1 cut(s)	271
BtsIMutI	CAGTG	1 cut(s)	271
BveI	ACCTGC	1 cut(s)	956
Cac8I	GCNNGC	1 cut(s)	1387
CaiI	CAGNNNCTG	1 cut(s)	629
CfoI	GCGC	2 cut(s)	318, 658
Cfr13I	GGNCC	5 cut(s)	212, 374, 383, 1172, 1278
CseI	GACGC	2 cut(s)	226, 589
Csp6I	GTAC	5 cut(s)	208, 513, 1150, 1210, 1473
CviAII	CATG	9 cut(s)	196, 361, 577, 758, 982, 996, 1240, 1386, 1445
CviQI	GTAC	5 cut(s)	208, 513, 1150, 1210, 1473
DdeI	CTNAG	3 cut(s)	1045, 1100, 1108
DpnI	GATC	4 cut(s)	272, 410, 932, 1098
DpnII	GATC	4 cut(s)	270, 408, 930, 1096
Eam1104I	CTCTTC	1 cut(s)	813
EarI	CTCTTC	1 cut(s)	813
EciI	GGCGGA	1 cut(s)	215
Eco130I	CCWWGG	2 cut(s)	120, 195
Eco24I	GRGCYC	3 cut(s)	107, 167, 533
Eco47I	GGWCC	4 cut(s)	212, 374, 383, 1172
Eco57I	CTGAAG	2 cut(s)	135, 578
Eco72I	CACGTG	1 cut(s)	1178
Eco91I	GGTNACC	1 cut(s)	143
EcoNI	CCTNNNNNAGG	1 cut(s)	156
EcoO65I	GGTNACC	1 cut(s)	143
EcoRII	CCWGG	1 cut(s)	1390
EcoT14I	CCWWGG	2 cut(s)	120, 195
EcoT22I	ATGCAT	1 cut(s)	676
EcoT38I	GRGCYC	3 cut(s)	107, 167, 533
ErhI	CCWWGG	2 cut(s)	120, 195
Esp3I	CGTCTC	1 cut(s)	1130
FaeI	CATG	9 cut(s)	199, 364, 580, 761, 985, 999, 1243, 1389, 1448
FaqI	GGGAC	2 cut(s)	587, 714
FatI	CATG	9 cut(s)	195, 360, 576, 757, 981, 995, 1239, 1385, 1444
FauI	CCCGC	1 cut(s)	691
FblI	GTMKAC	2 cut(s)	1072, 1113
Fnu4HI	GCNGC	7 cut(s)	33, 90, 262, 330, 449, 630, 963
FokI	GGATG	3 cut(s)	212, 653, 1103
FriOI	GRGCYC	3 cut(s)	107, 167, 533
Fsp4HI	GCNGC	7 cut(s)	33, 90, 262, 330, 449, 630, 963
FspBI	CTAG	1 cut(s)	1434
GlaI	GCGC	2 cut(s)	317, 657
GluI	GCNGC	7 cut(s)	33, 90, 262, 330, 449, 630, 963
GsaI	CCCAGC	1 cut(s)	1209
HaeIII	GGCC	3 cut(s)	133, 1279, 1407
HapII	CCGG	2 cut(s)	436, 1231
HgaI	GACGC	2 cut(s)	226, 589
HhaI	GCGC	2 cut(s)	318, 658
Hin1I	GRCGYC	1 cut(s)	237
Hin1II	CATG	9 cut(s)	199, 364, 580, 761, 985, 999, 1243, 1389, 1448
Hin6I	GCGC	2 cut(s)	316, 656
HinP1I	GCGC	2 cut(s)	316, 656
HincII	GTYRAC	2 cut(s)	1236, 1346
HindII	GTYRAC	2 cut(s)	1236, 1346
HindIII	AAGCTT	1 cut(s)	946
HinfI	GANTC	3 cut(s)	5, 95, 1360
HpaI	GTTAAC	1 cut(s)	1236
HpaII	CCGG	2 cut(s)	436, 1231
HphI	GGTGA	7 cut(s)	137, 214, 265, 616, 728, 857, 997
Hpy166II	GTNNAC	7 cut(s)	607, 755, 1073, 1114, 1236, 1346, 1475
Hpy188I	TCNGA	6 cut(s)	230, 374, 599, 669, 1220, 1561
Hpy188III	TCNNGA	6 cut(s)	75, 381, 436, 1170, 1249, 1459
Hpy8I	GTNNAC	7 cut(s)	607, 755, 1073, 1114, 1236, 1346, 1475
Hpy99I	CGWCG	1 cut(s)	250
HpyAV	CCTTC	7 cut(s)	158, 433, 757, 778, 1333, 1374, 1418
HpyCH4III	ACNGT	1 cut(s)	705
HpyCH4IV	ACGT	7 cut(s)	416, 588, 1029, 1139, 1144, 1177, 1427
HpyCH4V	TGCA	8 cut(s)	20, 499, 674, 851, 902, 962, 1197, 1420
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 454, 589, 889
HpyF3I	CTNAG	3 cut(s)	1045, 1100, 1108
HpySE526I	ACGT	7 cut(s)	416, 588, 1029, 1139, 1144, 1177, 1427
Hsp92I	GRCGYC	1 cut(s)	237
Hsp92II	CATG	9 cut(s)	199, 364, 580, 761, 985, 999, 1243, 1389, 1448
HspAI	GCGC	2 cut(s)	316, 656
Kpn2I	TCCGGA	1 cut(s)	435
KpnI	GGTACC	1 cut(s)	1213
KspAI	GTTAAC	1 cut(s)	1236
Kzo9I	GATC	4 cut(s)	270, 408, 930, 1096
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	4 cut(s)	110, 170, 191, 1260
Lsp1109I	GCAGC	6 cut(s)	19, 76, 273, 435, 616, 974
LweI	GCATC	5 cut(s)	709, 838, 865, 870, 910
MaeI	CTAG	1 cut(s)	1434
MaeII	ACGT	7 cut(s)	416, 588, 1029, 1139, 1144, 1177, 1427
MaeIII	GTNAC	4 cut(s)	143, 412, 475, 1140
MalI	GATC	4 cut(s)	272, 410, 932, 1098
MboI	GATC	4 cut(s)	270, 408, 930, 1096
MboII	GAAGA	5 cut(s)	90, 503, 658, 830, 1548
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	1 cut(s)	1096
MhlI	GDGCHC	4 cut(s)	107, 167, 342, 533
MluCI	AATT	9 cut(s)	231, 399, 494, 777, 788, 1185, 1273, 1421, 1479
MmeI	TCCRAC	2 cut(s)	399, 723
Mph1103I	ATGCAT	1 cut(s)	676
MroI	TCCGGA	1 cut(s)	435
MroXI	GAANNNNTTC	1 cut(s)	1308
MseI	TTAA	3 cut(s)	1184, 1235, 1505
MslI	CAYNNNNRTG	2 cut(s)	79, 983
MspI	CCGG	2 cut(s)	436, 1231
MspR9I	CCNGG	2 cut(s)	1231, 1392
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	2 cut(s)	287, 676
MvaI	CCWGG	1 cut(s)	1392
MvnI	CGCG	2 cut(s)	316, 658
MwoI	GCNNNNNNNGC	4 cut(s)	125, 454, 589, 889
NciI	CCSGG	1 cut(s)	1231
NcoI	CCATGG	1 cut(s)	195
NdeII	GATC	4 cut(s)	270, 408, 930, 1096
NlaIII	CATG	9 cut(s)	199, 364, 580, 761, 985, 999, 1243, 1389, 1448
NlaIV	GGNNCC	8 cut(s)	106, 166, 193, 214, 385, 726, 1211, 1228
NmuCI	GTSAC	3 cut(s)	143, 412, 475
NsiI	ATGCAT	1 cut(s)	676
NspI	RCATGY	2 cut(s)	1389, 1448
PaeI	GCATGC	1 cut(s)	1389
PciSI	GCTCTTC	1 cut(s)	813
PctI	GAATGC	2 cut(s)	287, 676
PdmI	GAANNNNTTC	1 cut(s)	1308
PfeI	GAWTC	3 cut(s)	5, 95, 1360
PkrI	GCNGC	7 cut(s)	34, 91, 263, 331, 450, 631, 964
PmaCI	CACGTG	1 cut(s)	1178
PmlI	CACGTG	1 cut(s)	1178
Ppu21I	YACGTR	1 cut(s)	1178
PsiI	TTATAA	1 cut(s)	1130
Psp6I	CCWGG	1 cut(s)	1390
PspCI	CACGTG	1 cut(s)	1178
PspEI	GGTNACC	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	1205
PspGI	CCWGG	1 cut(s)	1390
PspN4I	GGNNCC	8 cut(s)	106, 166, 193, 214, 385, 726, 1211, 1228
PspPI	GGNCC	5 cut(s)	212, 374, 383, 1172, 1278
PstNI	CAGNNNCTG	1 cut(s)	629
PsuI	RGATCY	1 cut(s)	1096
RsaI	GTAC	5 cut(s)	209, 514, 1151, 1211, 1474
RsaNI	GTAC	5 cut(s)	208, 513, 1150, 1210, 1473
RseI	CAYNNNNRTG	2 cut(s)	79, 983
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	3 cut(s)	1184, 1235, 1505
SatI	GCNGC	7 cut(s)	33, 90, 262, 330, 449, 630, 963
Sau3AI	GATC	4 cut(s)	270, 408, 930, 1096
Sau96I	GGNCC	5 cut(s)	212, 374, 383, 1172, 1278
ScrFI	CCNGG	2 cut(s)	1231, 1392
SduI	GDGCHC	4 cut(s)	107, 167, 342, 533
SfaNI	GCATC	5 cut(s)	709, 838, 865, 870, 910
SfcI	CTRYAG	1 cut(s)	333
SinI	GGWCC	4 cut(s)	212, 374, 383, 1172
SmiMI	CAYNNNNRTG	2 cut(s)	79, 983
SmlI	CTYRAG	2 cut(s)	301, 452
SmoI	CTYRAG	2 cut(s)	301, 452
SphI	GCATGC	1 cut(s)	1389
Sse9I	AATT	9 cut(s)	231, 399, 494, 777, 788, 1185, 1273, 1421, 1479
SsiI	CCGC	7 cut(s)	200, 329, 616, 698, 722, 736, 912
SspMI	CTAG	1 cut(s)	1434
StyD4I	CCNGG	2 cut(s)	1229, 1390
StyI	CCWWGG	2 cut(s)	120, 195
TaaI	ACNGT	1 cut(s)	705
TaiI	ACGT	7 cut(s)	419, 591, 1032, 1142, 1147, 1180, 1430
TaqI	TCGA	2 cut(s)	463, 533
TasI	AATT	9 cut(s)	231, 399, 494, 777, 788, 1185, 1273, 1421, 1479
TatI	WGTACW	2 cut(s)	512, 1472
TauI	GCSGC	1 cut(s)	332
TfiI	GAWTC	3 cut(s)	5, 95, 1360
Tru1I	TTAA	3 cut(s)	1184, 1235, 1505
Tru9I	TTAA	3 cut(s)	1184, 1235, 1505
TscAI	CASTG	1 cut(s)	271
TseFI	GTSAC	3 cut(s)	143, 412, 475
TseI	GCWGC	6 cut(s)	32, 89, 261, 448, 629, 962
Tsp45I	GTSAC	3 cut(s)	143, 412, 475
TspDTI	ATGAA	3 cut(s)	680, 859, 1256
TspGWI	ACGGA	5 cut(s)	225, 234, 624, 1353, 1505
TspRI	CASTG	1 cut(s)	271
VpaK11BI	GGWCC	4 cut(s)	212, 374, 383, 1172
XagI	CCTNNNNNAGG	1 cut(s)	156
XapI	RAATTY	1 cut(s)	399
XceI	RCATGY	2 cut(s)	1389, 1448
XmiI	GTMKAC	2 cut(s)	1072, 1113
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	1 cut(s)	1434
Zsp2I	ATGCAT	1 cut(s)	676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.