RchiOBHm_Chr5g0058891

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
63677921 .. 63678217
297 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33550

Sequence Viewer

Length: 297 bp
ATGGCTAAGGAATGCTTCATCATCAAAGACACATGCTCCTCCCGACTGAAAATGGCAGTTGTAGATCACGTTGGCTATAACTACGCAATGTTTGGGTTTGCACCCTACGGACCATACTGGCGAGAAATGCGTAAGATTAACACTTTAGAGTTGCTCTCCAAGTGCCGGCTCGAGCTGCTCAAACAAATTCGAGGCTCGGAAGTGAGCACCTTTTTGAAAGAAATGTACAGAACTTGGAGCAGTAGAGCAAATGAAAAAAAAAAGGCTCAAACAGTGACCAAGTGTTGGTGGAGTTAA

Protein Analysis

98

Amino Acids

11.61

Weight (kDa)

9.62

Isoelectric Point (pI)

25.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 285
AcsI RAATTY 1 cut(s) 186
AfaI GTAC 1 cut(s) 227
AfiI CCNNNNNNNGG 2 cut(s) 165, 285
AgsI TTSAA 1 cut(s) 217
AluBI AGCT 1 cut(s) 175
AluI AGCT 1 cut(s) 175
Alw21I GWGCWC 1 cut(s) 209
Ama87I CYCGRG 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 175
ApoI RAATTY 1 cut(s) 186
AspS9I GGNCC 1 cut(s) 110
AvaI CYCGRG 1 cut(s) 170
AvaII GGWCC 1 cut(s) 110
Bbv12I GWGCWC 1 cut(s) 209
BbvI GCAGC 1 cut(s) 162
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme18I GGWCC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 170
BmgT120I GGNCC 1 cut(s) 110
BplI GAGNNNNNCTC 2 cut(s) 140, 172
Bpu10I CCTNAGC 1 cut(s) 6
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 285
Bse118I RCCGGY 1 cut(s) 165
Bse1I ACTGG 1 cut(s) 122
Bse3DI GCAATG 1 cut(s) 93
BseLI CCNNNNNNNGG 2 cut(s) 165, 285
BseMI GCAATG 1 cut(s) 93
BseNI ACTGG 1 cut(s) 122
BseRI GAGGAG 1 cut(s) 28
BseXI GCAGC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 209
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 1 cut(s) 166
BslI CCNNNNNNNGG 2 cut(s) 165, 285
BsmI GAATGC 1 cut(s) 17
BsoBI CYCGRG 1 cut(s) 170
Bsp1286I GDGCHC 1 cut(s) 209
Bsp1407I TGTACA 1 cut(s) 225
Bsp143I GATC 1 cut(s) 64
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 165
BsrGI TGTACA 1 cut(s) 225
BsrI ACTGG 1 cut(s) 122
BssAI RCCGGY 1 cut(s) 165
BssMI GATC 1 cut(s) 64
Bst4CI ACNGT 1 cut(s) 274
BstAUI TGTACA 1 cut(s) 225
BstC8I GCNNGC 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 6
BstKTI GATC 1 cut(s) 67
BstMBI GATC 1 cut(s) 64
BstMWI GCNNNNNNNGC 2 cut(s) 127, 175
BstNSI RCATGY 1 cut(s) 36
BstV1I GCAGC 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 279
Cac8I GCNNGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 165
Cfr13I GGNCC 1 cut(s) 110
Csp6I GTAC 1 cut(s) 226
CviAII CATG 1 cut(s) 33
CviJI RGCY 6 cut(s) 5, 75, 169, 175, 195, 266
CviKI_1 RGCY 6 cut(s) 5, 75, 169, 175, 195, 266
CviQI GTAC 1 cut(s) 226
DdeI CTNAG 1 cut(s) 6
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
Eco47I GGWCC 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 170
FaeI CATG 1 cut(s) 36
FaiI YATR 3 cut(s) 34, 78, 115
FalI AAGNNNNNCTT 1 cut(s) 31
FatI CATG 1 cut(s) 32
Fnu4HI GCNGC 1 cut(s) 176
Fsp4HI GCNGC 1 cut(s) 176
GluI GCNGC 1 cut(s) 176
HapII CCGG 1 cut(s) 166
Hin1II CATG 1 cut(s) 36
HpaII CCGG 1 cut(s) 166
Hpy188I TCNGA 1 cut(s) 199
Hpy188III TCNNGA 1 cut(s) 42
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 1 cut(s) 101
HpyF10VI GCNNNNNNNGC 2 cut(s) 127, 175
HpyF3I CTNAG 1 cut(s) 6
HpySE526I ACGT 1 cut(s) 69
Hsp92II CATG 1 cut(s) 36
KroI GCCGGC 1 cut(s) 165
KroNI GCCGGC 1 cut(s) 167
Kzo9I GATC 1 cut(s) 64
LmnI GCTCC 2 cut(s) 41, 237
LpnPI CCDG 2 cut(s) 103, 179
Lsp1109I GCAGC 1 cut(s) 162
MaeII ACGT 1 cut(s) 69
MaeIII GTNAC 1 cut(s) 274
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MhlI GDGCHC 1 cut(s) 209
MluCI AATT 1 cut(s) 186
MnlI CCTC 2 cut(s) 49, 185
MroNI GCCGGC 1 cut(s) 165
MseI TTAA 2 cut(s) 138, 295
MspI CCGG 1 cut(s) 166
Mva1269I GAATGC 1 cut(s) 17
MwoI GCNNNNNNNGC 2 cut(s) 127, 175
NaeI GCCGGC 1 cut(s) 167
NdeII GATC 1 cut(s) 64
NgoMIV GCCGGC 1 cut(s) 165
NlaIII CATG 1 cut(s) 36
NmuCI GTSAC 1 cut(s) 274
NspI RCATGY 1 cut(s) 36
PaeR7I CTCGAG 1 cut(s) 170
PctI GAATGC 1 cut(s) 17
PdiI GCCGGC 1 cut(s) 167
PflMI CCANNNNNTGG 1 cut(s) 285
PkrI GCNGC 1 cut(s) 177
PspPI GGNCC 1 cut(s) 110
PspXI VCTCGAGB 1 cut(s) 170
RsaI GTAC 1 cut(s) 227
RsaNI GTAC 1 cut(s) 226
SaqAI TTAA 2 cut(s) 138, 295
SatI GCNGC 1 cut(s) 176
Sau3AI GATC 1 cut(s) 64
Sau96I GGNCC 1 cut(s) 110
SduI GDGCHC 1 cut(s) 209
SetI ASST 3 cut(s) 72, 177, 212
Sfr274I CTCGAG 1 cut(s) 170
SinI GGWCC 1 cut(s) 110
SlaI CTCGAG 1 cut(s) 170
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
Sse9I AATT 1 cut(s) 186
TaaI ACNGT 1 cut(s) 274
TaiI ACGT 1 cut(s) 72
TaqI TCGA 2 cut(s) 171, 190
TasI AATT 1 cut(s) 186
TatI WGTACW 1 cut(s) 225
Tru1I TTAA 2 cut(s) 138, 295
Tru9I TTAA 2 cut(s) 138, 295
TscAI CASTG 1 cut(s) 279
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 1 cut(s) 175
Tsp45I GTSAC 1 cut(s) 274
TspDTI ATGAA 2 cut(s) 7, 267
TspGWI ACGGA 1 cut(s) 123
TspRI CASTG 1 cut(s) 279
Van91I CCANNNNNTGG 1 cut(s) 285
VpaK11BI GGWCC 1 cut(s) 110
XapI RAATTY 1 cut(s) 186
XceI RCATGY 1 cut(s) 36
XhoI CTCGAG 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.