Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Reverse (-)

2286759 .. 2288938

Gene Structure 2180 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1032900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGATTCTTTCCCTTATGCAAACTCTATCACTGCTGGTTTATTCACAATAATCATCGTGTCATATTACTTATCACGAAGATGGAGAGCTGCCAATCACAAGGGCAAATTGTCACCACCTGAAGCCAAGGGTGCATGGCCTATATTGGGTCACCTTCCTTTGTTAGGAGGCTCTACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTATGGACCCCTTTACACTATCCGCCTTGGCGTCTATCCGTCATTGGTGATAAGCAGCAGCGAGATCGCAAAAGAATGCTTCACAACCAATGACTTGAAAGTAAACTCGCGCCCAAAGATGGCAGTTGTCGACCACATTGGCTACAACTACGCCATGTTTGGGTTCGCACCATCTGGACCCTATTGGCGAGAAATTCGCAAGATCACCACCTTGGAGTTGCTCTCAAACCGGAGGGTTGAGCTGCTCAAGCACATTCGAGTCTCGGAAAGCTCGAAATCTGGAGTGGTGGTAGAGCTGAAGCAATGGTTTGGGGACATGTCGCTGAACGTGATTGTTAGAATGGTGGCCGGAAAGAGGTATTCAGTAGCTGCCGATGAGGATGAGAAGAAAGAAGCGCTCAGGGTTCAGAATGCATTGAGGGAGTTTTTTCACTTTGTGGGATTGTTTTTGGTGGGTGATGCGGTTCCTTATCTGCGGTGGTTGGATTTGGGTGGGCATGAGAAGGCAATGAAGAAAACTGCAAAGGAATTGGACGCCATTGTTGGAGAGTGGGTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGGTGCAAAGGGAGAGCAGGACTTCATAGATGCGATGCTTTCTGTGCTTGATGGTGCAGACCTTGGCGGTTTTGATGCTGATACGATCAACAAAGCCACAAGCTTGAATATGATTGCAGGAGGTACCGATACCACCATGGTGACATTAACGTGGGCAATATCATTGTTGGTGAACAACCCTCACATTCTGAAGAGAGCCCTAAACGAACTGGACACGAAAATAGGCAGACAAAGAGTTGTGAGTGAAGAAGATATAAGCAACTTGGTCTACATCCAAGCTATTGTAAAGGAGACATTACGTTTATACCCAGCAGCACCATTATCAGGGCCACGTGAATTCACTGAGGATTGCACCATTGCTGGGTGCCATATTCGAAAGGGCACCCGGTTGATCATGAACCTCTGGAAGCTCCAAACAGACCCTAAAAATTGGCCCGATCCATTCGAGTTCAAGCCAGAGAGATTTCTTACCACCCATAAGGATGTTGATGTGAAGGGTCATCATTTTGAGTTGATTCCATTTGGAAGTGGTAGAAGAGCATGCCCTGGTTTGGCATTTGGCCTTCAAATTGTGCAATTTACATTGGCTAGCTTTCTACATGCGTTTGAAATCTCGAACCCATCTAGTGCACCAATTGATATGACGGAGAGTTTTGGGCTGACCAACGTGAAGGCTACTCCACTCAAAGTTCTTATCAAACCTCGCTTGTTTTTTGAATTATATAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

509

Amino Acids

56.76

Weight (kDa)

9.04

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	40 - 487	2.1e-90	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	920
AccB1I	GGYRCC	3 cut(s)	920, 1161, 1178
AccI	GTMKAC	2 cut(s)	342, 1065
AccII	CGCG	1 cut(s)	322
AciI	CCGC	5 cut(s)	206, 235, 674, 688, 864
AclWI	GGATC	1 cut(s)	1229
AcoI	YGGCCR	1 cut(s)	558
AcsI	RAATTY	2 cut(s)	405, 1133
AcuI	CTGAAG	3 cut(s)	141, 530, 1007
AcvI	CACGTG	1 cut(s)	1130
AcyI	GRCGYC	2 cut(s)	243, 747
AdeI	CACNNNGTG	1 cut(s)	649
AfaI	GTAC	1 cut(s)	922
AfeI	AGCGCT	1 cut(s)	609
AfiI	CCNNNNNNNGG	8 cut(s)	146, 164, 331, 372, 567, 1121, 1158, 1348
AflIII	ACRYGT	1 cut(s)	528
AgsI	TTSAA	7 cut(s)	310, 770, 904, 1249, 1364, 1406, 1514
AjnI	CCWGG	1 cut(s)	1342
AleI	CACNNNNGTG	1 cut(s)	935
AluBI	AGCT	9 cut(s)	89, 454, 483, 508, 581, 900, 1076, 1207, 1389
AluI	AGCT	9 cut(s)	89, 454, 483, 508, 581, 900, 1076, 1207, 1389
Alw21I	GWGCWC	1 cut(s)	1429
Alw26I	GTCTC	2 cut(s)	478, 1082
Alw44I	GTGCAC	1 cut(s)	1425
AlwI	GGATC	1 cut(s)	1229
AlwNI	CAGNNNCTG	1 cut(s)	581
Aor51HI	AGCGCT	1 cut(s)	609
AoxI	GGCC	5 cut(s)	137, 558, 1124, 1229, 1357
ApaLI	GTGCAC	1 cut(s)	1425
ApeKI	GCWGC	6 cut(s)	89, 267, 270, 454, 581, 1109
ApoI	RAATTY	2 cut(s)	405, 1133
Asp718I	GGTACC	1 cut(s)	920
AspLEI	GCGC	2 cut(s)	324, 610
AspS9I	GGNCC	4 cut(s)	218, 389, 1124, 1230
AsuC2I	CCSGG	1 cut(s)	1183
AsuHPI	GGTGA	7 cut(s)	105, 143, 271, 409, 680, 949, 979
AsuII	TTCGAA	1 cut(s)	1171
AsuNHI	GCTAGC	1 cut(s)	1385
AvaII	GGWCC	2 cut(s)	218, 389
BaeGI	GKGCMC	2 cut(s)	1181, 1429
BanI	GGYRCC	3 cut(s)	920, 1161, 1178
BanII	GRGCYC	1 cut(s)	997
BbrPI	CACGTG	1 cut(s)	1130
Bbv12I	GWGCWC	1 cut(s)	1429
BbvI	GCAGC	6 cut(s)	76, 279, 282, 441, 568, 1121
BccI	CCATC	5 cut(s)	75, 325, 391, 842, 1426
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	1 cut(s)	1344
BclI	TGATCA	1 cut(s)	1188
BcnI	CCSGG	1 cut(s)	1183
BcoDI	GTCTC	2 cut(s)	478, 1082
BfaI	CTAG	2 cut(s)	1386, 1422
BfoI	RGCGCY	1 cut(s)	611
BisI	GCNGC	6 cut(s)	90, 268, 271, 455, 582, 1110
BlsI	GCNGC	6 cut(s)	91, 269, 272, 456, 583, 1111
Bme1390I	CCNGG	2 cut(s)	1183, 1344
Bme18I	GGWCC	2 cut(s)	218, 389
BmgT120I	GGNCC	4 cut(s)	218, 389, 1124, 1230
BmiI	GGNNCC	7 cut(s)	199, 220, 391, 678, 922, 1163, 1180
BmrFI	CCNGG	2 cut(s)	1183, 1344
BmsI	GCATC	4 cut(s)	661, 817, 822, 862
BmtI	GCTAGC	1 cut(s)	1389
BplI	GAGNNNNNCTC	2 cut(s)	419, 451
BpmI	CTGGAG	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	611
Bpu14I	TTCGAA	1 cut(s)	1171
BpuEI	CTTGAG	1 cut(s)	443
BpuMI	CCSGG	1 cut(s)	1183
BsaAI	YACGTR	1 cut(s)	1130
BsaHI	GRCGYC	2 cut(s)	243, 747
BsaJI	CCNNGG	7 cut(s)	126, 201, 238, 423, 859, 933, 1342
BsaWI	WCCGGW	1 cut(s)	441
BsaXI	ACNNNNNCTCC	4 cut(s)	486, 516, 750, 780
Bsc4I	CCNNNNNNNGG	8 cut(s)	146, 164, 331, 372, 567, 1121, 1158, 1348
Bse1I	ACTGG	1 cut(s)	1011
Bse3DI	GCAATG	3 cut(s)	521, 726, 1152
BseBI	CCWGG	1 cut(s)	1344
BseDI	CCNNGG	7 cut(s)	126, 201, 238, 423, 859, 933, 1342
BseGI	GGATG	3 cut(s)	598, 1068, 1285
BseLI	CCNNNNNNNGG	8 cut(s)	146, 164, 331, 372, 567, 1121, 1158, 1348
BseMI	GCAATG	3 cut(s)	521, 726, 1152
BseMII	CTCAG	2 cut(s)	625, 1131
BseNI	ACTGG	1 cut(s)	1011
BseRI	GAGGAG	2 cut(s)	171, 799
BseSI	GKGCMC	2 cut(s)	1181, 1429
BseXI	GCAGC	6 cut(s)	76, 279, 282, 441, 568, 1121
BseYI	CCCAGC	2 cut(s)	1105, 1157
BsgI	GTGCAG	1 cut(s)	873
Bsh1236I	CGCG	1 cut(s)	322
BshFI	GGCC	5 cut(s)	139, 560, 1126, 1231, 1359
BshNI	GGYRCC	3 cut(s)	920, 1161, 1178
BsiHKAI	GWGCWC	1 cut(s)	1429
BsiSI	CCGG	3 cut(s)	442, 561, 1183
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	8 cut(s)	146, 164, 331, 372, 567, 1121, 1158, 1348
BsmAI	GTCTC	2 cut(s)	478, 1082
BsmFI	GGGAC	1 cut(s)	539
BsmI	GAATGC	2 cut(s)	293, 628
BsnI	GGCC	5 cut(s)	139, 560, 1126, 1231, 1359
Bsp119I	TTCGAA	1 cut(s)	1171
Bsp1286I	GDGCHC	3 cut(s)	997, 1181, 1429
Bsp143I	GATC	5 cut(s)	276, 414, 882, 1188, 1234
Bsp19I	CCATGG	2 cut(s)	201, 933
BspACI	CCGC	5 cut(s)	206, 235, 674, 688, 864
BspANI	GGCC	5 cut(s)	139, 560, 1126, 1231, 1359
BspCNI	CTCAG	2 cut(s)	624, 1132
BspFNI	CGCG	1 cut(s)	322
BspHI	TCATGA	1 cut(s)	1191
BspLI	GGNNCC	7 cut(s)	199, 220, 391, 678, 922, 1163, 1180
BspOI	GCTAGC	1 cut(s)	1389
BspPI	GGATC	1 cut(s)	1229
BspQI	GCTCTTC	2 cut(s)	765, 1327
BspT104I	TTCGAA	1 cut(s)	1171
BspT107I	GGYRCC	3 cut(s)	920, 1161, 1178
BsrDI	GCAATG	3 cut(s)	521, 726, 1152
BsrI	ACTGG	1 cut(s)	1011
BssECI	CCNNGG	7 cut(s)	126, 201, 238, 423, 859, 933, 1342
BssMI	GATC	5 cut(s)	276, 414, 882, 1188, 1234
BssNI	GRCGYC	2 cut(s)	243, 747
BssT1I	CCWWGG	6 cut(s)	126, 201, 238, 423, 859, 933
Bst2UI	CCWGG	1 cut(s)	1344
Bst6I	CTCTTC	3 cut(s)	765, 983, 1327
BstACI	GRCGYC	2 cut(s)	243, 747
BstBAI	YACGTR	1 cut(s)	1130
BstBI	TTCGAA	1 cut(s)	1171
BstC8I	GCNNGC	2 cut(s)	1339, 1387
BstDEI	CTNAG	2 cut(s)	611, 1140
BstDSI	CCRYGG	2 cut(s)	201, 933
BstEII	GGTNACC	1 cut(s)	149
BstENI	CCTNNNNNAGG	1 cut(s)	162
BstF5I	GGATG	3 cut(s)	598, 1068, 1285
BstFNI	CGCG	1 cut(s)	322
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	2 cut(s)	324, 610
BstKTI	GATC	5 cut(s)	279, 417, 885, 1191, 1237
BstMAI	GTCTC	2 cut(s)	478, 1082
BstMBI	GATC	5 cut(s)	276, 414, 882, 1188, 1234
BstMWI	GCNNNNNNNGC	3 cut(s)	131, 460, 841
BstNI	CCWGG	1 cut(s)	1344
BstNSI	RCATGY	3 cut(s)	532, 1341, 1400
BstPI	GGTNACC	1 cut(s)	149
BstSCI	CCNGG	2 cut(s)	1181, 1342
BstSLI	GKGCMC	2 cut(s)	1181, 1429
BstUI	CGCG	1 cut(s)	322
BstV1I	GCAGC	6 cut(s)	76, 279, 282, 441, 568, 1121
BsuRI	GGCC	5 cut(s)	139, 560, 1126, 1231, 1359
BtgI	CCRYGG	2 cut(s)	201, 933
BtgZI	GCGATG	1 cut(s)	845
BtsCI	GGATG	3 cut(s)	598, 1068, 1285
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	2 cut(s)	30, 1137
Cac8I	GCNNGC	2 cut(s)	1339, 1387
CaiI	CAGNNNCTG	1 cut(s)	581
CciI	TCATGA	1 cut(s)	1191
CfoI	GCGC	2 cut(s)	324, 610
Cfr13I	GGNCC	4 cut(s)	218, 389, 1124, 1230
CseI	GACGC	2 cut(s)	232, 755
Csp6I	GTAC	1 cut(s)	921
CviAII	CATG	9 cut(s)	135, 202, 367, 529, 710, 934, 1192, 1338, 1397
CviQI	GTAC	1 cut(s)	921
DdeI	CTNAG	2 cut(s)	611, 1140
DpnI	GATC	5 cut(s)	278, 416, 884, 1190, 1236
DpnII	GATC	5 cut(s)	276, 414, 882, 1188, 1234
DraIII	CACNNNGTG	1 cut(s)	649
EaeI	YGGCCR	1 cut(s)	558
Eam1104I	CTCTTC	3 cut(s)	765, 983, 1327
EarI	CTCTTC	3 cut(s)	765, 983, 1327
EciI	GGCGGA	2 cut(s)	221, 224
Eco130I	CCWWGG	6 cut(s)	126, 201, 238, 423, 859, 933
Eco24I	GRGCYC	1 cut(s)	997
Eco47I	GGWCC	2 cut(s)	218, 389
Eco47III	AGCGCT	1 cut(s)	609
Eco57I	CTGAAG	3 cut(s)	141, 530, 1007
Eco72I	CACGTG	1 cut(s)	1130
Eco91I	GGTNACC	1 cut(s)	149
EcoNI	CCTNNNNNAGG	1 cut(s)	162
EcoO65I	GGTNACC	1 cut(s)	149
EcoRI	GAATTC	1 cut(s)	1133
EcoRII	CCWGG	1 cut(s)	1342
EcoT14I	CCWWGG	6 cut(s)	126, 201, 238, 423, 859, 933
EcoT22I	ATGCAT	1 cut(s)	628
EcoT38I	GRGCYC	1 cut(s)	997
ErhI	CCWWGG	6 cut(s)	126, 201, 238, 423, 859, 933
FaeI	CATG	9 cut(s)	138, 205, 370, 532, 713, 937, 1195, 1341, 1400
FaqI	GGGAC	1 cut(s)	539
FatI	CATG	9 cut(s)	134, 201, 366, 528, 709, 933, 1191, 1337, 1396
FbaI	TGATCA	1 cut(s)	1188
FblI	GTMKAC	2 cut(s)	342, 1065
Fnu4HI	GCNGC	6 cut(s)	90, 268, 271, 455, 582, 1110
FokI	GGATG	3 cut(s)	605, 1055, 1292
FriOI	GRGCYC	1 cut(s)	997
Fsp4HI	GCNGC	6 cut(s)	90, 268, 271, 455, 582, 1110
FspBI	CTAG	2 cut(s)	1386, 1422
GlaI	GCGC	2 cut(s)	323, 609
GluI	GCNGC	6 cut(s)	90, 268, 271, 455, 582, 1110
GsaI	CCCAGC	2 cut(s)	1109, 1161
GsuI	CTGGAG	1 cut(s)	513
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	5 cut(s)	139, 560, 1126, 1231, 1359
HapII	CCGG	3 cut(s)	442, 561, 1183
HgaI	GACGC	2 cut(s)	232, 755
HhaI	GCGC	2 cut(s)	324, 610
Hin1I	GRCGYC	2 cut(s)	243, 747
Hin1II	CATG	9 cut(s)	138, 205, 370, 532, 713, 937, 1195, 1341, 1400
Hin6I	GCGC	2 cut(s)	322, 608
HinP1I	GCGC	2 cut(s)	322, 608
HincII	GTYRAC	1 cut(s)	343
HindII	GTYRAC	1 cut(s)	343
HindIII	AAGCTT	1 cut(s)	898
HinfI	GANTC	3 cut(s)	5, 471, 1312
HpaII	CCGG	3 cut(s)	442, 561, 1183
HphI	GGTGA	7 cut(s)	105, 143, 271, 409, 680, 949, 979
Hpy166II	GTNNAC	5 cut(s)	316, 343, 970, 1066, 1427
Hpy188I	TCNGA	3 cut(s)	478, 621, 987
Hpy188III	TCNNGA	6 cut(s)	75, 387, 492, 1192, 1201, 1411
Hpy8I	GTNNAC	5 cut(s)	316, 343, 970, 1066, 1427
HpyAV	CCTTC	5 cut(s)	164, 709, 1285, 1370, 1462
HpyCH4IV	ACGT	5 cut(s)	540, 947, 1096, 1129, 1464
HpyF10VI	GCNNNNNNNGC	3 cut(s)	131, 460, 841
HpyF3I	CTNAG	2 cut(s)	611, 1140
HpySE526I	ACGT	5 cut(s)	540, 947, 1096, 1129, 1464
Hsp92I	GRCGYC	2 cut(s)	243, 747
Hsp92II	CATG	9 cut(s)	138, 205, 370, 532, 713, 937, 1195, 1341, 1400
HspAI	GCGC	2 cut(s)	322, 608
KpnI	GGTACC	1 cut(s)	924
Ksp22I	TGATCA	1 cut(s)	1188
Kzo9I	GATC	5 cut(s)	276, 414, 882, 1188, 1234
LguI	GCTCTTC	2 cut(s)	765, 1327
LmnI	GCTCC	2 cut(s)	197, 1212
Lsp1109I	GCAGC	6 cut(s)	76, 279, 282, 441, 568, 1121
LweI	GCATC	4 cut(s)	661, 817, 822, 862
MaeI	CTAG	2 cut(s)	1386, 1422
MaeII	ACGT	5 cut(s)	540, 947, 1096, 1129, 1464
MaeIII	GTNAC	3 cut(s)	111, 149, 937
MalI	GATC	5 cut(s)	278, 416, 884, 1190, 1236
MboI	GATC	5 cut(s)	276, 414, 882, 1188, 1234
MboII	GAAGA	8 cut(s)	90, 610, 736, 782, 1000, 1055, 1058, 1344
MfeI	CAATTG	1 cut(s)	1431
MhlI	GDGCHC	3 cut(s)	997, 1181, 1429
MluCI	AATT	9 cut(s)	107, 405, 740, 1133, 1225, 1365, 1373, 1431, 1514
MlyI	GAGTC	1 cut(s)	480
MmeI	TCCRAC	2 cut(s)	675, 736
Mph1103I	ATGCAT	1 cut(s)	628
MseI	TTAA	1 cut(s)	944
MslI	CAYNNNNRTG	4 cut(s)	79, 935, 946, 1278
MspI	CCGG	3 cut(s)	442, 561, 1183
MspR9I	CCNGG	2 cut(s)	1183, 1344
MunI	CAATTG	1 cut(s)	1431
Mva1269I	GAATGC	2 cut(s)	293, 628
MvaI	CCWGG	1 cut(s)	1344
MvnI	CGCG	1 cut(s)	322
MwoI	GCNNNNNNNGC	3 cut(s)	131, 460, 841
NciI	CCSGG	1 cut(s)	1183
NcoI	CCATGG	2 cut(s)	201, 933
NdeII	GATC	5 cut(s)	276, 414, 882, 1188, 1234
NheI	GCTAGC	1 cut(s)	1385
NlaIII	CATG	9 cut(s)	138, 205, 370, 532, 713, 937, 1195, 1341, 1400
NlaIV	GGNNCC	7 cut(s)	199, 220, 391, 678, 922, 1163, 1180
NmuCI	GTSAC	3 cut(s)	111, 149, 937
NsiI	ATGCAT	1 cut(s)	628
NspI	RCATGY	3 cut(s)	532, 1341, 1400
NspV	TTCGAA	1 cut(s)	1171
OliI	CACNNNNGTG	1 cut(s)	935
PaeI	GCATGC	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	1191
PciI	ACATGT	1 cut(s)	528
PciSI	GCTCTTC	2 cut(s)	765, 1327
PcsI	WCGNNNNNNNCGW	1 cut(s)	482
PctI	GAATGC	2 cut(s)	293, 628
PfeI	GAWTC	2 cut(s)	5, 1312
PkrI	GCNGC	6 cut(s)	91, 269, 272, 456, 583, 1111
PleI	GAGTC	1 cut(s)	479
PmaCI	CACGTG	1 cut(s)	1130
PmlI	CACGTG	1 cut(s)	1130
PpsI	GAGTC	1 cut(s)	479
Ppu21I	YACGTR	1 cut(s)	1130
PscI	ACATGT	1 cut(s)	528
Psp6I	CCWGG	1 cut(s)	1342
PspCI	CACGTG	1 cut(s)	1130
PspEI	GGTNACC	1 cut(s)	149
PspFI	CCCAGC	2 cut(s)	1105, 1157
PspGI	CCWGG	1 cut(s)	1342
PspN4I	GGNNCC	7 cut(s)	199, 220, 391, 678, 922, 1163, 1180
PspPI	GGNCC	4 cut(s)	218, 389, 1124, 1230
PstNI	CAGNNNCTG	1 cut(s)	581
RsaI	GTAC	1 cut(s)	922
RsaNI	GTAC	1 cut(s)	921
RseI	CAYNNNNRTG	4 cut(s)	79, 935, 946, 1278
SalI	GTCGAC	1 cut(s)	341
SapI	GCTCTTC	2 cut(s)	765, 1327
SaqAI	TTAA	1 cut(s)	944
SatI	GCNGC	6 cut(s)	90, 268, 271, 455, 582, 1110
Sau3AI	GATC	5 cut(s)	276, 414, 882, 1188, 1234
Sau96I	GGNCC	4 cut(s)	218, 389, 1124, 1230
SchI	GAGTC	1 cut(s)	480
ScrFI	CCNGG	2 cut(s)	1183, 1344
SduI	GDGCHC	3 cut(s)	997, 1181, 1429
SfaNI	GCATC	4 cut(s)	661, 817, 822, 862
SfuI	TTCGAA	1 cut(s)	1171
SinI	GGWCC	2 cut(s)	218, 389
SmiMI	CAYNNNNRTG	4 cut(s)	79, 935, 946, 1278
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
SphI	GCATGC	1 cut(s)	1341
Sse9I	AATT	9 cut(s)	107, 405, 740, 1133, 1225, 1365, 1373, 1431, 1514
SsiI	CCGC	5 cut(s)	206, 235, 674, 688, 864
SspMI	CTAG	2 cut(s)	1386, 1422
StyD4I	CCNGG	2 cut(s)	1181, 1342
StyI	CCWWGG	6 cut(s)	126, 201, 238, 423, 859, 933
TaiI	ACGT	5 cut(s)	543, 950, 1099, 1132, 1467
TaqI	TCGA	6 cut(s)	342, 469, 485, 1171, 1242, 1412
TasI	AATT	9 cut(s)	107, 405, 740, 1133, 1225, 1365, 1373, 1431, 1514
TfiI	GAWTC	2 cut(s)	5, 1312
Tru1I	TTAA	1 cut(s)	944
Tru9I	TTAA	1 cut(s)	944
TscAI	CASTG	2 cut(s)	37, 1144
TseFI	GTSAC	3 cut(s)	111, 149, 937
TseI	GCWGC	6 cut(s)	89, 267, 270, 454, 581, 1109
Tsp45I	GTSAC	3 cut(s)	111, 149, 937
TspDTI	ATGAA	3 cut(s)	737, 811, 1208
TspGWI	ACGGA	2 cut(s)	240, 1457
TspRI	CASTG	2 cut(s)	37, 1144
VneI	GTGCAC	1 cut(s)	1425
VpaK11BI	GGWCC	2 cut(s)	218, 389
XagI	CCTNNNNNAGG	1 cut(s)	162
XapI	RAATTY	2 cut(s)	405, 1133
XceI	RCATGY	3 cut(s)	532, 1341, 1400
XmiI	GTMKAC	2 cut(s)	342, 1065
XspI	CTAG	2 cut(s)	1386, 1422
Zsp2I	ATGCAT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.