RchiOBHm_Chr5g0058931

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
63714074 .. 63714975
902 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33554

Sequence Viewer

Length: 309 bp
ATGGATTTAATAGTTTCCAAGGGCATAATAGCTCCTGAAGCCAAGGGTGCATGGTCTATATTTGGTCACCTTCCCTTTTTAGGAGGGTCGACCAAGCCTCTTCATGAAGCCTTGGGAGCCATGGCGGACAAGTACGGACCCTTTTTCACTGCCCGCCTCGAGATGCATCAATCTTTGGTGGTAAGCAATAGTGATATGGCTAAGGAGTGCTTCACGATCAAAGACACATGCATGTCCTCCCGCCCCAAAATAGCACTTGCAAATCACATGGGCTATAACTATGCCATGTTTGCATTAGCACCAGCCTGA

Protein Analysis

102

Amino Acids

11.04

Weight (kDa)

7.82

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 15 - 90 8.6e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 89
AciI CCGC 3 cut(s) 125, 154, 241
AcuI CTGAAG 1 cut(s) 57
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 1 cut(s) 80
AluBI AGCT 1 cut(s) 32
AluI AGCT 1 cut(s) 32
Ama87I CYCGRG 1 cut(s) 158
AspS9I GGNCC 1 cut(s) 137
AsuHPI GGTGA 1 cut(s) 59
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 1 cut(s) 137
Bme18I GGWCC 1 cut(s) 137
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 137
BmiI GGNNCC 2 cut(s) 118, 139
BmsI GCATC 2 cut(s) 153, 175
Bpu10I CCTNAGC 1 cut(s) 201
BsaJI CCNNGG 4 cut(s) 18, 42, 111, 120
Bsc4I CCNNNNNNNGG 1 cut(s) 80
BseDI CCNNGG 4 cut(s) 18, 42, 111, 120
BseLI CCNNNNNNNGG 1 cut(s) 80
BsiHKCI CYCGRG 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 158
Bsp143I GATC 1 cut(s) 216
Bsp19I CCATGG 1 cut(s) 120
BspACI CCGC 3 cut(s) 125, 154, 241
BspHI TCATGA 1 cut(s) 103
BspLI GGNNCC 2 cut(s) 118, 139
BssECI CCNNGG 4 cut(s) 18, 42, 111, 120
BssMI GATC 1 cut(s) 216
BssT1I CCWWGG 4 cut(s) 18, 42, 111, 120
Bst6I CTCTTC 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 154
BstDEI CTNAG 1 cut(s) 201
BstDSI CCRYGG 1 cut(s) 120
BstEII GGTNACC 1 cut(s) 65
BstKTI GATC 1 cut(s) 219
BstMBI GATC 1 cut(s) 216
BstMWI GCNNNNNNNGC 4 cut(s) 38, 47, 116, 290
BstNSI RCATGY 2 cut(s) 231, 235
BstPI GGTNACC 1 cut(s) 65
BtgI CCRYGG 1 cut(s) 120
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 147
Cac8I GCNNGC 1 cut(s) 154
CciI TCATGA 1 cut(s) 103
Cfr13I GGNCC 1 cut(s) 137
Csp6I GTAC 1 cut(s) 133
CviAII CATG 7 cut(s) 51, 104, 121, 228, 232, 268, 286
CviJI RGCY 8 cut(s) 32, 41, 97, 110, 119, 200, 273, 305
CviKI_1 RGCY 8 cut(s) 32, 41, 97, 110, 119, 200, 273, 305
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 1 cut(s) 201
DpnI GATC 1 cut(s) 218
DpnII GATC 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
EciI GGCGGA 1 cut(s) 140
Eco130I CCWWGG 4 cut(s) 18, 42, 111, 120
Eco47I GGWCC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 57
Eco88I CYCGRG 1 cut(s) 158
Eco91I GGTNACC 1 cut(s) 65
EcoO65I GGTNACC 1 cut(s) 65
EcoT14I CCWWGG 4 cut(s) 18, 42, 111, 120
EcoT22I ATGCAT 2 cut(s) 168, 233
ErhI CCWWGG 4 cut(s) 18, 42, 111, 120
FaeI CATG 7 cut(s) 54, 107, 124, 231, 235, 271, 289
FalI AAGNNNNNCTT 2 cut(s) 194, 226
FatI CATG 7 cut(s) 50, 103, 120, 227, 231, 267, 285
FauI CCCGC 2 cut(s) 161, 248
FblI GTMKAC 1 cut(s) 89
Hin1II CATG 7 cut(s) 54, 107, 124, 231, 235, 271, 289
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
HphI GGTGA 1 cut(s) 59
Hpy166II GTNNAC 1 cut(s) 90
Hpy188III TCNNGA 4 cut(s) 35, 104, 160, 214
Hpy8I GTNNAC 1 cut(s) 90
HpyAV CCTTC 1 cut(s) 80
HpyCH4V TGCA 5 cut(s) 50, 166, 231, 260, 293
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 47, 116, 290
HpyF3I CTNAG 1 cut(s) 201
Hsp92II CATG 7 cut(s) 54, 107, 124, 231, 235, 271, 289
Kzo9I GATC 1 cut(s) 216
LmnI GCTCC 2 cut(s) 37, 116
LpnPI CCDG 1 cut(s) 48
LweI GCATC 2 cut(s) 153, 175
MaeIII GTNAC 1 cut(s) 65
MalI GATC 1 cut(s) 218
MboI GATC 1 cut(s) 216
MboII GAAGA 1 cut(s) 92
MnlI CCTC 4 cut(s) 77, 108, 167, 247
Mph1103I ATGCAT 2 cut(s) 168, 233
MseI TTAA 1 cut(s) 8
MslI CAYNNNNRTG 1 cut(s) 230
MwoI GCNNNNNNNGC 4 cut(s) 38, 47, 116, 290
NcoI CCATGG 1 cut(s) 120
NdeII GATC 1 cut(s) 216
NlaIII CATG 7 cut(s) 54, 107, 124, 231, 235, 271, 289
NlaIV GGNNCC 2 cut(s) 118, 139
NmuCI GTSAC 1 cut(s) 65
NsiI ATGCAT 2 cut(s) 168, 233
NspI RCATGY 2 cut(s) 231, 235
PaeR7I CTCGAG 1 cut(s) 158
PagI TCATGA 1 cut(s) 103
PspEI GGTNACC 1 cut(s) 65
PspN4I GGNNCC 2 cut(s) 118, 139
PspPI GGNCC 1 cut(s) 137
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
RseI CAYNNNNRTG 1 cut(s) 230
SalI GTCGAC 1 cut(s) 88
SaqAI TTAA 1 cut(s) 8
Sau3AI GATC 1 cut(s) 216
Sau96I GGNCC 1 cut(s) 137
SetI ASST 2 cut(s) 34, 72
SfaNI GCATC 2 cut(s) 153, 175
Sfr274I CTCGAG 1 cut(s) 158
SinI GGWCC 1 cut(s) 137
SlaI CTCGAG 1 cut(s) 158
SmiMI CAYNNNNRTG 1 cut(s) 230
SmlI CTYRAG 1 cut(s) 158
SmoI CTYRAG 1 cut(s) 158
SsiI CCGC 3 cut(s) 125, 154, 241
StyI CCWWGG 4 cut(s) 18, 42, 111, 120
TaqI TCGA 2 cut(s) 89, 159
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 2 cut(s) 92, 120
TspGWI ACGGA 1 cut(s) 150
TspRI CASTG 1 cut(s) 154
VpaK11BI GGWCC 1 cut(s) 137
XceI RCATGY 2 cut(s) 231, 235
XhoI CTCGAG 1 cut(s) 158
XmiI GTMKAC 1 cut(s) 89
Zsp2I ATGCAT 2 cut(s) 168, 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.