RchiOBHm_Chr6g0300131

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
61085512 .. 61086127
616 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26951

Sequence Viewer

Length: 330 bp
ATGAAAAAGAAGGGAAACTCGGATGGTGACCGCGTAGTGTTGGTGGCGTTGAAACAAATGTTTGGGGACTTAACTCTCAATGTGATTCTTAAAATGATTGCAGGGAAGCGATATTCTGTTGCGACCAATGAGGATGAGAAGAAAGAAGCGTGGCTGTTTGCGGTGGGTGATGCGATTCCTTATCTTCGGTGGTTGGATTTGGGTGGACATGAGAAGGCGATGAAGAAAACTGCGAAAGAAATGGACGCCATTGTTGGGGGCTGGCTAGAAGAGCATAAGCGAAAAAGAGAACTCGGAGAAGAAGGAGATGATATAGAAGAGCCCGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.26

Weight (kDa)

5.74

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 33
AciI CCGC 2 cut(s) 31, 161
AcyI GRCGYC 1 cut(s) 246
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 1 cut(s) 52
Ama87I CYCGRG 1 cut(s) 323
AsuC2I CCSGG 2 cut(s) 324, 325
AsuHPI GGTGA 2 cut(s) 38, 179
AvaI CYCGRG 1 cut(s) 323
BanII GRGCYC 1 cut(s) 324
BccI CCATC 1 cut(s) 17
BcnI CCSGG 2 cut(s) 324, 325
BfaI CTAG 1 cut(s) 266
Bme1390I CCNGG 2 cut(s) 324, 325
BmeT110I CYCGRG 1 cut(s) 323
BmrFI CCNGG 2 cut(s) 324, 325
BmsI GCATC 1 cut(s) 160
BpuMI CCSGG 2 cut(s) 324, 325
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 1 cut(s) 323
Bsc4I CCNNNNNNNGG 1 cut(s) 255
BseDI CCNNGG 1 cut(s) 323
BseGI GGATG 2 cut(s) 28, 139
BseLI CCNNNNNNNGG 1 cut(s) 255
Bsh1236I CGCG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 323
BsiSI CCGG 1 cut(s) 324
BslFI GGGAC 1 cut(s) 80
BslI CCNNNNNNNGG 1 cut(s) 255
BsmFI GGGAC 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 323
Bsp1286I GDGCHC 1 cut(s) 324
BspACI CCGC 2 cut(s) 31, 161
BspFNI CGCG 1 cut(s) 33
BspQI GCTCTTC 2 cut(s) 264, 312
BssECI CCNNGG 1 cut(s) 323
BssNI GRCGYC 1 cut(s) 246
Bst6I CTCTTC 2 cut(s) 264, 312
BstACI GRCGYC 1 cut(s) 246
BstC8I GCNNGC 1 cut(s) 263
BstEII GGTNACC 1 cut(s) 26
BstF5I GGATG 2 cut(s) 28, 139
BstFNI CGCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 1 cut(s) 271
BstPI GGTNACC 1 cut(s) 26
BstSCI CCNGG 2 cut(s) 322, 323
BstUI CGCG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 233
BtsCI GGATG 2 cut(s) 28, 139
Cac8I GCNNGC 1 cut(s) 263
Cfr9I CCCGGG 1 cut(s) 323
CseI GACGC 1 cut(s) 254
CviAII CATG 1 cut(s) 209
CviJI RGCY 4 cut(s) 154, 261, 265, 322
CviKI_1 RGCY 4 cut(s) 154, 261, 265, 322
Eam1104I CTCTTC 2 cut(s) 264, 312
EarI CTCTTC 2 cut(s) 264, 312
Eco24I GRGCYC 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 323
Eco91I GGTNACC 1 cut(s) 26
EcoO65I GGTNACC 1 cut(s) 26
EcoT38I GRGCYC 1 cut(s) 324
FaeI CATG 1 cut(s) 212
FaiI YATR 3 cut(s) 210, 276, 314
FaqI GGGAC 1 cut(s) 80
FatI CATG 1 cut(s) 208
FokI GGATG 2 cut(s) 35, 146
FriOI GRGCYC 1 cut(s) 324
FspBI CTAG 1 cut(s) 266
HapII CCGG 1 cut(s) 324
HgaI GACGC 1 cut(s) 254
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 1 cut(s) 212
HinfI GANTC 2 cut(s) 85, 175
HpaII CCGG 1 cut(s) 324
HphI GGTGA 2 cut(s) 38, 179
Hpy166II GTNNAC 1 cut(s) 206
Hpy188I TCNGA 2 cut(s) 22, 296
Hpy8I GTNNAC 1 cut(s) 206
HpyAV CCTTC 3 cut(s) 4, 208, 296
HpyCH4V TGCA 1 cut(s) 101
HpyF10VI GCNNNNNNNGC 1 cut(s) 271
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 1 cut(s) 212
LguI GCTCTTC 2 cut(s) 264, 312
LpnPI CCDG 2 cut(s) 87, 247
LweI GCATC 1 cut(s) 160
MaeI CTAG 1 cut(s) 266
MaeIII GTNAC 1 cut(s) 26
MboII GAAGA 6 cut(s) 151, 176, 235, 281, 311, 329
MhlI GDGCHC 1 cut(s) 324
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 1 cut(s) 124
MseI TTAA 2 cut(s) 71, 90
MspI CCGG 1 cut(s) 324
MspR9I CCNGG 2 cut(s) 324, 325
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 1 cut(s) 271
NciI CCSGG 2 cut(s) 324, 325
NlaIII CATG 1 cut(s) 212
NmuCI GTSAC 1 cut(s) 26
PciSI GCTCTTC 2 cut(s) 264, 312
PfeI GAWTC 2 cut(s) 85, 175
PspEI GGTNACC 1 cut(s) 26
SapI GCTCTTC 2 cut(s) 264, 312
SaqAI TTAA 2 cut(s) 71, 90
ScrFI CCNGG 2 cut(s) 324, 325
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 1 cut(s) 160
SgeI CNNG 8 cut(s) 31, 44, 114, 162, 221, 274, 278, 305
SmaI CCCGGG 1 cut(s) 325
SsiI CCGC 2 cut(s) 31, 161
SspMI CTAG 1 cut(s) 266
StyD4I CCNGG 2 cut(s) 322, 323
TfiI GAWTC 2 cut(s) 85, 175
Tru1I TTAA 2 cut(s) 71, 90
Tru9I TTAA 2 cut(s) 71, 90
TseFI GTSAC 1 cut(s) 26
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 2 cut(s) 17, 236
TspMI CCCGGG 1 cut(s) 323
XmaI CCCGGG 1 cut(s) 323
XspI CTAG 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.