RchiOBHm_Chr2g0107681

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
19209487 .. 19209687
201 bp
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UTR
Exon/CDS
Intron
PRQ48170

Sequence Viewer

Length: 201 bp
ATGGGTGCATGGCTTTTTGTAGGTCATCTTCCCTTGTTCAGAGGACCGCAGCCTCCCCACATAGCATTTGGAGCCATGGCTGACAAGTATGGACCACTTTTCTCGGTATGGCTTGGTGTCTATCAAACTTTGGTGGTGAGTAGCAGTGAGGTAGCCAAGGAATGTTTTACAACCCTTGACTTGAGAGCCTCCTCGCGCTAG

Protein Analysis

66

Amino Acids

7.26

Weight (kDa)

7.96

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 3 - 59 2.7e-07 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 196
AciI CCGC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 49
AspLEI GCGC 1 cut(s) 198
AspS9I GGNCC 2 cut(s) 44, 92
AsuHPI GGTGA 1 cut(s) 148
AvaII GGWCC 2 cut(s) 44, 92
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BbvI GCAGC 1 cut(s) 61
BfaI CTAG 1 cut(s) 199
BisI GCNGC 1 cut(s) 50
BlsI GCNGC 1 cut(s) 51
Bme18I GGWCC 2 cut(s) 44, 92
BmgT120I GGNCC 2 cut(s) 44, 92
BmiI GGNNCC 1 cut(s) 73
BsaJI CCNNGG 2 cut(s) 75, 156
BseDI CCNNGG 2 cut(s) 75, 156
BseRI GAGGAG 1 cut(s) 181
BseXI GCAGC 1 cut(s) 61
Bsh1236I CGCG 1 cut(s) 196
Bsp19I CCATGG 1 cut(s) 75
BspACI CCGC 1 cut(s) 47
BspFNI CGCG 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 73
BssECI CCNNGG 2 cut(s) 75, 156
BssT1I CCWWGG 2 cut(s) 75, 156
BstDSI CCRYGG 1 cut(s) 75
BstFNI CGCG 1 cut(s) 196
BstHHI GCGC 1 cut(s) 198
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstUI CGCG 1 cut(s) 196
BstV1I GCAGC 1 cut(s) 61
BtgI CCRYGG 1 cut(s) 75
BtsI GCAGTG 1 cut(s) 151
BtsIMutI CAGTG 1 cut(s) 151
CfoI GCGC 1 cut(s) 198
Cfr13I GGNCC 2 cut(s) 44, 92
CviAII CATG 2 cut(s) 9, 76
CviJI RGCY 7 cut(s) 13, 52, 74, 80, 112, 155, 188
CviKI_1 RGCY 7 cut(s) 13, 52, 74, 80, 112, 155, 188
Eco130I CCWWGG 2 cut(s) 75, 156
Eco47I GGWCC 2 cut(s) 44, 92
EcoT14I CCWWGG 2 cut(s) 75, 156
ErhI CCWWGG 2 cut(s) 75, 156
FaeI CATG 2 cut(s) 12, 79
FaiI YATR 5 cut(s) 10, 62, 77, 90, 109
FatI CATG 2 cut(s) 8, 75
Fnu4HI GCNGC 1 cut(s) 50
Fsp4HI GCNGC 1 cut(s) 50
FspBI CTAG 1 cut(s) 199
GlaI GCGC 1 cut(s) 197
GluI GCNGC 1 cut(s) 50
HhaI GCGC 1 cut(s) 198
Hin1II CATG 2 cut(s) 12, 79
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HphI GGTGA 1 cut(s) 148
Hpy188I TCNGA 1 cut(s) 41
HpyCH4V TGCA 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
Hsp92II CATG 2 cut(s) 12, 79
HspAI GCGC 1 cut(s) 196
LmnI GCTCC 1 cut(s) 71
Lsp1109I GCAGC 1 cut(s) 61
MaeI CTAG 1 cut(s) 199
MboII GAAGA 1 cut(s) 20
MnlI CCTC 4 cut(s) 35, 63, 142, 199
MvnI CGCG 1 cut(s) 196
MwoI GCNNNNNNNGC 1 cut(s) 71
NcoI CCATGG 1 cut(s) 75
NlaIII CATG 2 cut(s) 12, 79
NlaIV GGNNCC 1 cut(s) 73
PkrI GCNGC 1 cut(s) 51
PspN4I GGNNCC 1 cut(s) 73
PspPI GGNCC 2 cut(s) 44, 92
SatI GCNGC 1 cut(s) 50
Sau96I GGNCC 2 cut(s) 44, 92
SetI ASST 2 cut(s) 25, 153
SgeI CNNG 9 cut(s) 21, 46, 88, 97, 115, 125, 169, 188, 193
SinI GGWCC 2 cut(s) 44, 92
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SsiI CCGC 1 cut(s) 47
SspMI CTAG 1 cut(s) 199
StyI CCWWGG 2 cut(s) 75, 156
TscAI CASTG 1 cut(s) 151
TseI GCWGC 1 cut(s) 49
TspRI CASTG 1 cut(s) 151
VpaK11BI GGWCC 2 cut(s) 44, 92
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XspI CTAG 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.