RchiOBHm_Chr5g0058861

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
63676713 .. 63677195
483 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33547

Sequence Viewer

Length: 483 bp
ATGAGCAAGCTAGTTTATATCCAAGCCATAGTGAAAGAGACGCTTCGGTTATACCCGGCAACACCGTTATCGAGACCACATGAATTCAACCAGTATAGCATCATCGATGGCTACTATGTCCCAAAGGGTACACGGTTGATCACAAACCTATGGAAGATCCAAACTGACCCAAAAATGTGGCCGGATGACCTACTAAGGTTCAAGCCGGAGAGATTTCTAACCACCCATAAAGATGTCGATGTTAGGGGTCAACATTTTGAGTTAGTTCTGTTTGGAAGTGGAAGAAGAGCATGCCCTAGACTAGATTTTGGCATTCAAATGGTGCAATTTACATTGGCTAGCTTCTTACATGCGTTCCAAGTTTCGACTATCTCTGGTAATGCACCAATTGATATGACCGAGAGTTTTGGGCTCACAAACGTCAAAGCTACTCCACTTGAAGTTCTCATCAAACCTCGTTTATCTCATAAACTTTACGGGTAG

Protein Analysis

160

Amino Acids

18.4

Weight (kDa)

9.55

Isoelectric Point (pI)

23.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 139 1.2e-33 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 151
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 1 cut(s) 83
AfaI GTAC 1 cut(s) 130
AgsI TTSAA 4 cut(s) 88, 202, 317, 440
AluBI AGCT 3 cut(s) 10, 342, 428
AluI AGCT 3 cut(s) 10, 342, 428
Alw26I GTCTC 2 cut(s) 32, 67
AlwI GGATC 1 cut(s) 151
AoxI GGCC 1 cut(s) 179
ApoI RAATTY 1 cut(s) 83
AsuC2I CCSGG 1 cut(s) 56
AsuNHI GCTAGC 1 cut(s) 338
BanII GRGCYC 1 cut(s) 414
BccI CCATC 1 cut(s) 101
BclI TGATCA 1 cut(s) 138
BcnI CCSGG 1 cut(s) 56
BcoDI GTCTC 2 cut(s) 32, 67
BfaI CTAG 4 cut(s) 11, 297, 302, 339
Bme1390I CCNGG 1 cut(s) 56
BmrFI CCNGG 1 cut(s) 56
BmsI GCATC 1 cut(s) 108
BmtI GCTAGC 1 cut(s) 342
BpuMI CCSGG 1 cut(s) 56
Bsa29I ATCGAT 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 67
Bse1I ACTGG 1 cut(s) 91
BseCI ATCGAT 1 cut(s) 105
BseGI GGATG 1 cut(s) 190
BseNI ACTGG 1 cut(s) 91
BshFI GGCC 1 cut(s) 181
BshVI ATCGAT 1 cut(s) 105
BsiSI CCGG 3 cut(s) 56, 182, 206
BslFI GGGAC 1 cut(s) 104
BsmAI GTCTC 2 cut(s) 32, 67
BsmBI CGTCTC 1 cut(s) 32
BsmFI GGGAC 1 cut(s) 104
BsmI GAATGC 1 cut(s) 312
BsnI GGCC 1 cut(s) 181
Bso31I GGTCTC 1 cut(s) 67
Bsp1286I GDGCHC 1 cut(s) 414
Bsp143I GATC 2 cut(s) 138, 156
BspANI GGCC 1 cut(s) 181
BspDI ATCGAT 1 cut(s) 105
BspOI GCTAGC 1 cut(s) 342
BspPI GGATC 1 cut(s) 151
BspQI GCTCTTC 1 cut(s) 280
BspTNI GGTCTC 1 cut(s) 67
BsrI ACTGG 1 cut(s) 91
BssMI GATC 2 cut(s) 138, 156
Bst4CI ACNGT 2 cut(s) 66, 135
Bst6I CTCTTC 1 cut(s) 280
BstC8I GCNNGC 3 cut(s) 8, 292, 340
BstDEI CTNAG 1 cut(s) 194
BstF5I GGATG 1 cut(s) 190
BstKTI GATC 2 cut(s) 141, 159
BstMAI GTCTC 2 cut(s) 32, 67
BstMBI GATC 2 cut(s) 138, 156
BstNSI RCATGY 2 cut(s) 294, 353
BstSCI CCNGG 1 cut(s) 54
BstX2I RGATCY 1 cut(s) 156
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 1 cut(s) 156
Bsu15I ATCGAT 1 cut(s) 105
BsuRI GGCC 1 cut(s) 181
BsuTUI ATCGAT 1 cut(s) 105
BtsCI GGATG 1 cut(s) 190
Cac8I GCNNGC 3 cut(s) 8, 292, 340
ClaI ATCGAT 1 cut(s) 105
CseI GACGC 1 cut(s) 49
Csp6I GTAC 1 cut(s) 129
CviAII CATG 3 cut(s) 80, 291, 350
CviJI RGCY 9 cut(s) 10, 26, 111, 181, 205, 338, 342, 412, 428
CviKI_1 RGCY 9 cut(s) 10, 26, 111, 181, 205, 338, 342, 412, 428
CviQI GTAC 1 cut(s) 129
DdeI CTNAG 1 cut(s) 194
DpnI GATC 2 cut(s) 140, 158
DpnII GATC 2 cut(s) 138, 156
EaeI YGGCCR 1 cut(s) 179
Eam1104I CTCTTC 1 cut(s) 280
EarI CTCTTC 1 cut(s) 280
Eco24I GRGCYC 1 cut(s) 414
Eco31I GGTCTC 1 cut(s) 67
EcoRI GAATTC 1 cut(s) 83
EcoT38I GRGCYC 1 cut(s) 414
Esp3I CGTCTC 1 cut(s) 32
FaeI CATG 3 cut(s) 83, 294, 353
FalI AAGNNNNNCTT 2 cut(s) 27, 59
FaqI GGGAC 1 cut(s) 104
FatI CATG 3 cut(s) 79, 290, 349
FbaI TGATCA 1 cut(s) 138
FokI GGATG 1 cut(s) 197
FriOI GRGCYC 1 cut(s) 414
FspBI CTAG 4 cut(s) 11, 297, 302, 339
HaeIII GGCC 1 cut(s) 181
HapII CCGG 3 cut(s) 56, 182, 206
HgaI GACGC 1 cut(s) 49
Hin1II CATG 3 cut(s) 83, 294, 353
HincII GTYRAC 1 cut(s) 251
HindII GTYRAC 1 cut(s) 251
HpaII CCGG 3 cut(s) 56, 182, 206
Hpy166II GTNNAC 2 cut(s) 131, 251
Hpy188III TCNNGA 1 cut(s) 72
Hpy8I GTNNAC 2 cut(s) 131, 251
HpyCH4III ACNGT 2 cut(s) 66, 135
HpyCH4IV ACGT 1 cut(s) 420
HpyCH4V TGCA 2 cut(s) 325, 383
HpyF3I CTNAG 1 cut(s) 194
HpySE526I ACGT 1 cut(s) 420
Hsp92II CATG 3 cut(s) 83, 294, 353
Ksp22I TGATCA 1 cut(s) 138
Kzo9I GATC 2 cut(s) 138, 156
LguI GCTCTTC 1 cut(s) 280
LpnPI CCDG 5 cut(s) 69, 104, 195, 219, 360
LweI GCATC 1 cut(s) 108
MaeI CTAG 4 cut(s) 11, 297, 302, 339
MaeII ACGT 1 cut(s) 420
MalI GATC 2 cut(s) 140, 158
MboI GATC 2 cut(s) 138, 156
MboII GAAGA 3 cut(s) 166, 294, 297
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 156
MhlI GDGCHC 1 cut(s) 414
MluCI AATT 3 cut(s) 83, 326, 387
MnlI CCTC 1 cut(s) 465
MslI CAYNNNNRTG 2 cut(s) 231, 317
MspI CCGG 3 cut(s) 56, 182, 206
MspR9I CCNGG 1 cut(s) 56
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 312
NciI CCSGG 1 cut(s) 56
NdeII GATC 2 cut(s) 138, 156
NheI GCTAGC 1 cut(s) 338
NlaIII CATG 3 cut(s) 83, 294, 353
NspI RCATGY 2 cut(s) 294, 353
PaeI GCATGC 1 cut(s) 294
PciSI GCTCTTC 1 cut(s) 280
PctI GAATGC 1 cut(s) 312
PsuI RGATCY 1 cut(s) 156
RsaI GTAC 1 cut(s) 130
RsaNI GTAC 1 cut(s) 129
RseI CAYNNNNRTG 2 cut(s) 231, 317
SapI GCTCTTC 1 cut(s) 280
Sau3AI GATC 2 cut(s) 138, 156
ScrFI CCNGG 1 cut(s) 56
SduI GDGCHC 1 cut(s) 414
SetI ASST 8 cut(s) 12, 150, 192, 200, 344, 423, 430, 457
SfaNI GCATC 1 cut(s) 108
SmiMI CAYNNNNRTG 2 cut(s) 231, 317
SphI GCATGC 1 cut(s) 294
Sse9I AATT 3 cut(s) 83, 326, 387
SspMI CTAG 4 cut(s) 11, 297, 302, 339
StyD4I CCNGG 1 cut(s) 54
TaaI ACNGT 2 cut(s) 66, 135
TaiI ACGT 1 cut(s) 423
TaqI TCGA 4 cut(s) 71, 105, 237, 365
TaqII GACCGA 1 cut(s) 413
TasI AATT 3 cut(s) 83, 326, 387
TspDTI ATGAA 1 cut(s) 96
XapI RAATTY 1 cut(s) 83
XceI RCATGY 2 cut(s) 294, 353
XspI CTAG 4 cut(s) 11, 297, 302, 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.