MD08G1234700.v1.1

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000137
Physical Location & Seq
Reverse (-)
30161595 .. 30164033
2439 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1234700.v1.1.491

Sequence Viewer

Length: 1578 bp
ATGGATTCTCTCCCATATGCAAACTCTATCACTGCTGGCTTGTTCACAGTAATCATCGTGTTCTATTACTTATCACGAAGATGGAGAGCTGCAAATCACAAGGGCAAATTATCACCACCTGAAGCCAAGGGTGGATGGCCTATATTTGGTCACCTTCCTTTGTTTGGAGACTCCATGCCTCCTCACAGAACTTTGGGAGCCATGGCGGACAAGTACGGACCCATTTTTACTATCCGCCTTGGCGTCCATCCGGCTTTGGTGATAAGCAGCAGTGAGATCGTAAAAGAATGCTACACAACCAAAGACGTGAGCTCACTCTCCCGCCCAAAGATGGTGGTTGTAGACCACGTTAGCTACGACTACGCCATGTTTGGGTTCGGACCATCTGGACCCTATTGGCGAGAAATTCGCAAGCTAGTCTCCTTGGAGTTGCTCTCAGTCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGCATATGAAGTGACTGCTTTCTTGAAAGATTTATACGAACTTTGGAGAACAAAGAAGGAGAGCTCGAAAGATGGAGTGGTTGTAGACCTGAAGCCATGGCTTGGGGACATGATGCTGAACGTGATTCTTAAAATGGTGGTCGGAAAGCGGTACTCCGTGGCTGCCACTGGGGATGAGAAGAAAGAAGCGCTTAAGGTTCAGACTGCATTGAAGGAGTTATTTGATTATATGGGCATGTTTTTGGTGGGTGATGCAGTTCCTTATCTGCGGTGGTTGGATTGGGGTGGATATGAGAAGGCGATGAAGAAAAGTGCAACGGAAATGCACGCAATTGCTGCAGAGTGGCTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGATGCAAAAGGAGAACAGGACTTCATGGATGCGATGCTTTCTGTGCTTGATGGTGCAGACCTTGGCGGTTTTGATGCTGATACGATCGTCAAAGCCACAAGCTTGACTGTTATTGCAGGAGGTAACGATACCACCATGGTGACAATGACGTGGGCAATATCGTTATTGCTGAACCACCCTCACGCTATGAAAAAAGCCCTAAACGAACTGGACACCAAAATAGGCCGACAAAGAGTTGTGAGTGAGGAAGATTTGAGCAACTTGGTCTACATCCAAGCTATTGTAAAGGAGACGTTACGTTTGTACCCAGCAGGACCACTATCAGGGCCACGTGTATTCGAGGAGGATTGCACCATTGCTGGCTACCATATCCGAAAGGGCACCCGATTTATCCCAAACCTCTGGAAGATCCAAGTTGACCCAAAAAATTGGTCCGAGCCATTAGAGTTCAAGCCAGAGAGATTTCTAACCACGCACAAGGATGTTGATCTGAAGGGTCAGCATTTTCAGTTTATTCCTTTTGGAAGTGGTAGAAGATCATGCCCTGGTATGGCATTTGGCCTTCAATTGGTGCAATATACGTTGGCTAGTTTTCTACATGCATTTGAAATCTCAAACCCGTCGAGTGCACCAATTGATATGACGGAGAGTTTTGGACTGACCAACGTTAAGGCAACTCCACTCAATATTCTCATCGAACCTCACTTATCTTCTGAATTCTATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

526

Amino Acids

58.95

Weight (kDa)

8.42

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 504 1.1e-94 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1229
AccB7I CCANNNNNTGG 1 cut(s) 572
AccI GTMKAC 3 cut(s) 342, 555, 1116
AccIII TCCGGA 1 cut(s) 441
AciI CCGC 6 cut(s) 206, 235, 322, 619, 739, 915
AclI AACGTT 1 cut(s) 1515
AclWI GGATC 1 cut(s) 1252
AcsI RAATTY 2 cut(s) 405, 1565
AcuI CTGAAG 3 cut(s) 141, 581, 1361
AcvI CACGTG 1 cut(s) 1181
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 3 cut(s) 215, 623, 1154
AfeI AGCGCT 1 cut(s) 660
AfiI CCNNNNNNNGG 8 cut(s) 146, 164, 331, 372, 572, 1172, 1399, 1417
AflII CTTAAG 1 cut(s) 662
AflIII ACRYGT 1 cut(s) 1180
AgsI TTSAA 6 cut(s) 496, 682, 821, 1300, 1415, 1457
AjiI CACGTC 2 cut(s) 307, 999
AjnI CCWGG 1 cut(s) 1393
AleI CACNNNNGTG 1 cut(s) 986
AluBI AGCT 8 cut(s) 89, 312, 354, 415, 454, 534, 951, 1127
AluI AGCT 8 cut(s) 89, 312, 354, 415, 454, 534, 951, 1127
Alw21I GWGCWC 3 cut(s) 314, 536, 1480
Alw26I GTCTC 3 cut(s) 162, 424, 1133
Alw44I GTGCAC 1 cut(s) 1476
AlwI GGATC 1 cut(s) 1252
Aor13HI TCCGGA 1 cut(s) 441
Aor51HI AGCGCT 1 cut(s) 660
AoxI GGCC 4 cut(s) 137, 1072, 1175, 1408
ApaLI GTGCAC 1 cut(s) 1476
ApeKI GCWGC 5 cut(s) 89, 267, 454, 632, 806
ApoI RAATTY 2 cut(s) 405, 1565
ArsI GACNNNNNNTTYG 4 cut(s) 1132, 1164, 1265, 1297
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 6 cut(s) 218, 380, 389, 1163, 1175, 1281
AsuHPI GGTGA 6 cut(s) 105, 143, 271, 731, 860, 1000
AvaII GGWCC 5 cut(s) 218, 380, 389, 1163, 1281
BaeGI GKGCMC 2 cut(s) 1232, 1480
BaeI ACNNNNGTAYC 4 cut(s) 921, 954, 1136, 1169
BanI GGYRCC 1 cut(s) 1229
BanII GRGCYC 2 cut(s) 314, 536
BbrPI CACGTG 1 cut(s) 1181
Bbv12I GWGCWC 3 cut(s) 314, 536, 1480
BbvI GCAGC 5 cut(s) 76, 279, 441, 619, 793
BccI CCATC 7 cut(s) 75, 129, 255, 325, 391, 536, 893
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 1 cut(s) 1395
BcoDI GTCTC 3 cut(s) 162, 424, 1133
BfaI CTAG 2 cut(s) 416, 1437
BfmI CTRYAG 1 cut(s) 807
BfoI RGCGCY 1 cut(s) 662
BfrI CTTAAG 1 cut(s) 662
BisI GCNGC 5 cut(s) 90, 268, 455, 633, 807
BlsI GCNGC 5 cut(s) 91, 269, 456, 634, 808
Bme1390I CCNGG 1 cut(s) 1395
Bme18I GGWCC 5 cut(s) 218, 380, 389, 1163, 1281
BmgBI CACGTC 2 cut(s) 307, 999
BmgT120I GGNCC 6 cut(s) 218, 380, 389, 1163, 1175, 1281
BmiI GGNNCC 4 cut(s) 199, 220, 391, 1231
BmrFI CCNGG 1 cut(s) 1395
BmrI ACTGGG 1 cut(s) 648
BmsI GCATC 6 cut(s) 573, 712, 841, 868, 873, 913
BmuI ACTGGG 1 cut(s) 648
BplI GAGNNNNNCTC 2 cut(s) 419, 451
BpuEI CTTGAG 1 cut(s) 443
BsaAI YACGTR 1 cut(s) 1181
BsaBI GATNNNNATC 1 cut(s) 1335
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 9 cut(s) 126, 201, 238, 423, 566, 627, 910, 984, 1393
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 2 cut(s) 537, 567
Bsc4I CCNNNNNNNGG 8 cut(s) 146, 164, 331, 372, 572, 1172, 1399, 1417
Bse1I ACTGG 2 cut(s) 643, 1062
Bse3DI GCAATG 1 cut(s) 1203
Bse8I GATNNNNATC 1 cut(s) 1335
BseAI TCCGGA 1 cut(s) 441
BseBI CCWGG 1 cut(s) 1395
BseDI CCNNGG 9 cut(s) 126, 201, 238, 423, 566, 627, 910, 984, 1393
BseGI GGATG 6 cut(s) 140, 247, 649, 883, 1119, 1336
BseJI GATNNNNATC 1 cut(s) 1335
BseLI CCNNNNNNNGG 8 cut(s) 146, 164, 331, 372, 572, 1172, 1399, 1417
BseMI GCAATG 1 cut(s) 1203
BseMII CTCAG 1 cut(s) 450
BseNI ACTGG 2 cut(s) 643, 1062
BseRI GAGGAG 3 cut(s) 171, 850, 1205
BseSI GKGCMC 2 cut(s) 1232, 1480
BseXI GCAGC 5 cut(s) 76, 279, 441, 619, 793
BseYI CCCAGC 1 cut(s) 1156
BsgI GTGCAG 1 cut(s) 924
Bsh1285I CGRYCG 1 cut(s) 936
BshFI GGCC 4 cut(s) 139, 1074, 1177, 1410
BshNI GGYRCC 1 cut(s) 1229
BsiEI CGRYCG 1 cut(s) 936
BsiHKAI GWGCWC 3 cut(s) 314, 536, 1480
BsiSI CCGG 2 cut(s) 251, 442
BslFI GGGAC 1 cut(s) 590
BslI CCNNNNNNNGG 8 cut(s) 146, 164, 331, 372, 572, 1172, 1399, 1417
BsmAI GTCTC 3 cut(s) 162, 424, 1133
BsmBI CGTCTC 1 cut(s) 1133
BsmFI GGGAC 1 cut(s) 590
BsmI GAATGC 1 cut(s) 293
BsnI GGCC 4 cut(s) 139, 1074, 1177, 1410
Bsp1286I GDGCHC 4 cut(s) 314, 536, 1232, 1480
Bsp13I TCCGGA 1 cut(s) 441
Bsp143I GATC 5 cut(s) 276, 933, 1257, 1336, 1385
Bsp19I CCATGG 3 cut(s) 201, 566, 984
BspACI CCGC 6 cut(s) 206, 235, 322, 619, 739, 915
BspANI GGCC 4 cut(s) 139, 1074, 1177, 1410
BspCNI CTCAG 1 cut(s) 449
BspEI TCCGGA 1 cut(s) 441
BspLI GGNNCC 4 cut(s) 199, 220, 391, 1231
BspMAI CTGCAG 1 cut(s) 811
BspPI GGATC 1 cut(s) 1252
BspQI GCTCTTC 1 cut(s) 816
BspT107I GGYRCC 1 cut(s) 1229
BspTI CTTAAG 1 cut(s) 662
BsrDI GCAATG 1 cut(s) 1203
BsrI ACTGG 2 cut(s) 643, 1062
BssECI CCNNGG 9 cut(s) 126, 201, 238, 423, 566, 627, 910, 984, 1393
BssMI GATC 5 cut(s) 276, 933, 1257, 1336, 1385
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 7 cut(s) 126, 201, 238, 423, 566, 910, 984
Bst2UI CCWGG 1 cut(s) 1395
Bst4CI ACNGT 2 cut(s) 49, 958
Bst6I CTCTTC 1 cut(s) 816
BstACI GRCGYC 1 cut(s) 243
BstAFI CTTAAG 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 806
BstBAI YACGTR 1 cut(s) 1181
BstC8I GCNNGC 4 cut(s) 37, 413, 798, 1210
BstDEI CTNAG 1 cut(s) 436
BstDSI CCRYGG 4 cut(s) 201, 566, 627, 984
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 6 cut(s) 140, 247, 649, 883, 1119, 1336
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 5 cut(s) 279, 936, 1260, 1339, 1388
BstMAI GTCTC 3 cut(s) 162, 424, 1133
BstMBI GATC 5 cut(s) 276, 933, 1257, 1336, 1385
BstMCI CGRYCG 1 cut(s) 936
BstMWI GCNNNNNNNGC 4 cut(s) 460, 806, 823, 892
BstNI CCWGG 1 cut(s) 1395
BstNSI RCATGY 2 cut(s) 709, 1451
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 1393
BstSFI CTRYAG 1 cut(s) 807
BstSLI GKGCMC 2 cut(s) 1232, 1480
BstV1I GCAGC 5 cut(s) 76, 279, 441, 619, 793
BstX2I RGATCY 1 cut(s) 1257
BstXI CCANNNNNNTGG 2 cut(s) 1251, 1278
BstYI RGATCY 1 cut(s) 1257
BsuRI GGCC 4 cut(s) 139, 1074, 1177, 1410
BtgI CCRYGG 4 cut(s) 201, 566, 627, 984
BtgZI GCGATG 2 cut(s) 785, 896
BtrI CACGTC 2 cut(s) 307, 999
BtsCI GGATG 6 cut(s) 140, 247, 649, 883, 1119, 1336
BtsI GCAGTG 2 cut(s) 30, 277
BtsIMutI CAGTG 3 cut(s) 30, 277, 636
Cac8I GCNNGC 4 cut(s) 37, 413, 798, 1210
CfoI GCGC 1 cut(s) 661
Cfr13I GGNCC 6 cut(s) 218, 380, 389, 1163, 1175, 1281
CseI GACGC 1 cut(s) 232
Csp6I GTAC 3 cut(s) 214, 622, 1153
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviQI GTAC 3 cut(s) 214, 622, 1153
DdeI CTNAG 1 cut(s) 436
DpnI GATC 5 cut(s) 278, 935, 1259, 1338, 1387
DpnII GATC 5 cut(s) 276, 933, 1257, 1336, 1385
Eam1104I CTCTTC 1 cut(s) 816
EarI CTCTTC 1 cut(s) 816
EciI GGCGGA 2 cut(s) 221, 224
Ecl136II GAGCTC 2 cut(s) 312, 534
Eco130I CCWWGG 7 cut(s) 126, 201, 238, 423, 566, 910, 984
Eco24I GRGCYC 2 cut(s) 314, 536
Eco47I GGWCC 5 cut(s) 218, 380, 389, 1163, 1281
Eco47III AGCGCT 1 cut(s) 660
Eco53kI GAGCTC 2 cut(s) 312, 534
Eco57I CTGAAG 3 cut(s) 141, 581, 1361
Eco72I CACGTG 1 cut(s) 1181
Eco91I GGTNACC 1 cut(s) 149
EcoICRI GAGCTC 2 cut(s) 312, 534
EcoO65I GGTNACC 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 1565
EcoRII CCWGG 1 cut(s) 1393
EcoT14I CCWWGG 7 cut(s) 126, 201, 238, 423, 566, 910, 984
EcoT22I ATGCAT 1 cut(s) 1453
EcoT38I GRGCYC 2 cut(s) 314, 536
ErhI CCWWGG 7 cut(s) 126, 201, 238, 423, 566, 910, 984
Esp3I CGTCTC 1 cut(s) 1133
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 1 cut(s) 590
FauI CCCGC 1 cut(s) 329
FauNDI CATATG 2 cut(s) 16, 475
FblI GTMKAC 3 cut(s) 342, 555, 1116
Fnu4HI GCNGC 5 cut(s) 90, 268, 455, 633, 807
FokI GGATG 6 cut(s) 147, 234, 656, 890, 1106, 1343
FriOI GRGCYC 2 cut(s) 314, 536
Fsp4HI GCNGC 5 cut(s) 90, 268, 455, 633, 807
FspBI CTAG 2 cut(s) 416, 1437
GlaI GCGC 1 cut(s) 660
GluI GCNGC 5 cut(s) 90, 268, 455, 633, 807
GsaI CCCAGC 1 cut(s) 1160
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 4 cut(s) 139, 1074, 1177, 1410
HapII CCGG 2 cut(s) 251, 442
HgaI GACGC 1 cut(s) 232
HhaI GCGC 1 cut(s) 661
Hin1I GRCGYC 1 cut(s) 243
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 1 cut(s) 1267
HindII GTYRAC 1 cut(s) 1267
HindIII AAGCTT 1 cut(s) 949
HinfI GANTC 3 cut(s) 5, 170, 595
HpaII CCGG 2 cut(s) 251, 442
HphI GGTGA 6 cut(s) 105, 143, 271, 731, 860, 1000
Hpy166II GTNNAC 6 cut(s) 45, 343, 556, 1117, 1267, 1478
Hpy188I TCNGA 7 cut(s) 380, 614, 672, 1223, 1285, 1341, 1564
Hpy188III TCNNGA 5 cut(s) 75, 387, 442, 493, 1252
Hpy8I GTNNAC 6 cut(s) 45, 343, 556, 1117, 1267, 1478
Hpy99I CGWCG 1 cut(s) 1474
HpyAV CCTTC 7 cut(s) 164, 439, 520, 676, 760, 1336, 1421
HpyCH4III ACNGT 2 cut(s) 49, 958
HpyCH4IV ACGT 9 cut(s) 306, 348, 591, 998, 1142, 1147, 1180, 1430, 1515
HpyF10VI GCNNNNNNNGC 4 cut(s) 460, 806, 823, 892
HpyF3I CTNAG 1 cut(s) 436
HpySE526I ACGT 9 cut(s) 306, 348, 591, 998, 1142, 1147, 1180, 1430, 1515
Hsp92I GRCGYC 1 cut(s) 243
HspAI GCGC 1 cut(s) 659
Kpn2I TCCGGA 1 cut(s) 441
Kzo9I GATC 5 cut(s) 276, 933, 1257, 1336, 1385
LguI GCTCTTC 1 cut(s) 816
LmnI GCTCC 1 cut(s) 197
Lsp1109I GCAGC 5 cut(s) 76, 279, 441, 619, 793
LweI GCATC 6 cut(s) 573, 712, 841, 868, 873, 913
MaeI CTAG 2 cut(s) 416, 1437
MaeII ACGT 9 cut(s) 306, 348, 591, 998, 1142, 1147, 1180, 1430, 1515
MaeIII GTNAC 5 cut(s) 149, 481, 971, 988, 1143
MalI GATC 5 cut(s) 278, 935, 1259, 1338, 1387
MboI GATC 5 cut(s) 276, 933, 1257, 1336, 1385
MboII GAAGA 8 cut(s) 90, 661, 787, 833, 1109, 1267, 1395, 1551
MfeI CAATTG 3 cut(s) 801, 1415, 1482
MflI RGATCY 1 cut(s) 1257
MhlI GDGCHC 4 cut(s) 314, 536, 1232, 1480
MluCI AATT 7 cut(s) 107, 405, 801, 1276, 1415, 1482, 1565
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 2 cut(s) 592, 726
Mph1103I ATGCAT 1 cut(s) 1453
MroI TCCGGA 1 cut(s) 441
MseI TTAA 3 cut(s) 600, 663, 1518
MslI CAYNNNNRTG 3 cut(s) 79, 986, 1329
MspCI CTTAAG 1 cut(s) 662
MspI CCGG 2 cut(s) 251, 442
MspR9I CCNGG 1 cut(s) 1395
MunI CAATTG 3 cut(s) 801, 1415, 1482
Mva1269I GAATGC 1 cut(s) 293
MvaI CCWGG 1 cut(s) 1395
MwoI GCNNNNNNNGC 4 cut(s) 460, 806, 823, 892
NcoI CCATGG 3 cut(s) 201, 566, 984
NdeI CATATG 2 cut(s) 16, 475
NdeII GATC 5 cut(s) 276, 933, 1257, 1336, 1385
NlaIV GGNNCC 4 cut(s) 199, 220, 391, 1231
NmuCI GTSAC 3 cut(s) 149, 481, 988
NsiI ATGCAT 1 cut(s) 1453
NspI RCATGY 2 cut(s) 709, 1451
OliI CACNNNNGTG 1 cut(s) 986
PciSI GCTCTTC 1 cut(s) 816
PcsI WCGNNNNNNNCGW 1 cut(s) 354
PctI GAATGC 1 cut(s) 293
PfeI GAWTC 2 cut(s) 5, 595
PflMI CCANNNNNTGG 1 cut(s) 572
PkrI GCNGC 5 cut(s) 91, 269, 456, 634, 808
Ple19I CGATCG 1 cut(s) 936
PleI GAGTC 1 cut(s) 164
PmaCI CACGTG 1 cut(s) 1181
PmlI CACGTG 1 cut(s) 1181
PpsI GAGTC 1 cut(s) 164
Ppu21I YACGTR 1 cut(s) 1181
Psp124BI GAGCTC 2 cut(s) 314, 536
Psp1406I AACGTT 1 cut(s) 1515
Psp6I CCWGG 1 cut(s) 1393
PspCI CACGTG 1 cut(s) 1181
PspEI GGTNACC 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 1156
PspGI CCWGG 1 cut(s) 1393
PspN4I GGNNCC 4 cut(s) 199, 220, 391, 1231
PspPI GGNCC 6 cut(s) 218, 380, 389, 1163, 1175, 1281
PstI CTGCAG 1 cut(s) 811
PsuI RGATCY 1 cut(s) 1257
PvuI CGATCG 1 cut(s) 936
RsaI GTAC 3 cut(s) 215, 623, 1154
RsaNI GTAC 3 cut(s) 214, 622, 1153
RseI CAYNNNNRTG 3 cut(s) 79, 986, 1329
SacI GAGCTC 2 cut(s) 314, 536
SapI GCTCTTC 1 cut(s) 816
SaqAI TTAA 3 cut(s) 600, 663, 1518
SatI GCNGC 5 cut(s) 90, 268, 455, 633, 807
Sau3AI GATC 5 cut(s) 276, 933, 1257, 1336, 1385
Sau96I GGNCC 6 cut(s) 218, 380, 389, 1163, 1175, 1281
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 1 cut(s) 1395
SduI GDGCHC 4 cut(s) 314, 536, 1232, 1480
SfaNI GCATC 6 cut(s) 573, 712, 841, 868, 873, 913
SfcI CTRYAG 1 cut(s) 807
SinI GGWCC 5 cut(s) 218, 380, 389, 1163, 1281
SmiMI CAYNNNNRTG 3 cut(s) 79, 986, 1329
SmlI CTYRAG 2 cut(s) 458, 662
SmoI CTYRAG 2 cut(s) 458, 662
Sse9I AATT 7 cut(s) 107, 405, 801, 1276, 1415, 1482, 1565
SsiI CCGC 6 cut(s) 206, 235, 322, 619, 739, 915
SspI AATATT 1 cut(s) 1537
SspMI CTAG 2 cut(s) 416, 1437
SstI GAGCTC 2 cut(s) 314, 536
StyD4I CCNGG 1 cut(s) 1393
StyI CCWWGG 7 cut(s) 126, 201, 238, 423, 566, 910, 984
TaaI ACNGT 2 cut(s) 49, 958
TaiI ACGT 9 cut(s) 309, 351, 594, 1001, 1145, 1150, 1183, 1433, 1518
TaqI TCGA 5 cut(s) 469, 536, 1188, 1472, 1545
TasI AATT 7 cut(s) 107, 405, 801, 1276, 1415, 1482, 1565
TfiI GAWTC 2 cut(s) 5, 595
Tru1I TTAA 3 cut(s) 600, 663, 1518
Tru9I TTAA 3 cut(s) 600, 663, 1518
TscAI CASTG 3 cut(s) 37, 277, 643
TseFI GTSAC 3 cut(s) 149, 481, 988
TseI GCWGC 5 cut(s) 89, 267, 454, 632, 806
Tsp45I GTSAC 3 cut(s) 149, 481, 988
TspDTI ATGAA 4 cut(s) 492, 788, 862, 1052
TspGWI ACGGA 4 cut(s) 231, 616, 803, 1508
TspRI CASTG 3 cut(s) 37, 277, 643
Van91I CCANNNNNTGG 1 cut(s) 572
Vha464I CTTAAG 1 cut(s) 662
VneI GTGCAC 1 cut(s) 1476
VpaK11BI GGWCC 5 cut(s) 218, 380, 389, 1163, 1281
XapI RAATTY 2 cut(s) 405, 1565
XceI RCATGY 2 cut(s) 709, 1451
XmiI GTMKAC 3 cut(s) 342, 555, 1116
XspI CTAG 2 cut(s) 416, 1437
Zsp2I ATGCAT 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.