Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Forward (+)

43919162 .. 43921532

Gene Structure 2371 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G537700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGCTGCAACCTAGATGCTCTTATATATGTCACAAGTTTTTCAGCTCCAAATCCTCAAACTCAAACCCAATTGAAGAACAACTATACCCAGCTATGGAGTTTTTTAACTTCTCATGCTCATCTGATCTTTTGATACCTCTTGTGGCAGCTGCCTTTTCACTCTTTCTTTCCTCTCTCTTCATGAAATCAAGAGGGGAAAGAAAATCACCACCAAAAGCTGGGGGTGCATGGCCTATAATCGGCCACCTCCACTTACTAGGAGGTTCAAAACCACCCCATTTAGTTTTGGGTAAAATGGCTGAGAGGTATGGGCCAATCTTCACGGTAAATATAGGAGTGCAAAAAGCTCTGATTGTAAGCAGCTCAGAAATAGCAAAAGAGTGTTTTACTACCAACGACAAAGTGTTTGCTAGTCGTCCGAAATTCATGGCGGCTGAAATCATGGCCTACAACTATGCCTTGTTCCCCTTCAGCCCTTACAGCCACTACTCTCGCCAAGTTCGCAAGATAGTTCTGCTTGAGGTTCTCTCCAACAGCCGCCTCGAGATGCTCAAACACGTTCGAGAATCCGAAGTGAAGGCGTCCATGAAAGGAATATACGAGCGATGCGTGACCAACGGGAAGAGTAGTACCAGTTCGAACAAGGCGTTGGTGGAGATGAGGGAATGGTTTTTGGACATAAATGAAAACATTGTGATTAGGATGATTGTAGGGAAACGATTTAGGGAAGCTACAAGCTCAAATTCCAAAGGCAGTAACTATTATTTAAAGAAGGAGACGTACATGGATTTTCTGAGATTGTCTGGGACTTTTGTGCTGTCCGATGCGATTCCCTGGTTGAGGTGGTTGGACTTGGGTGGCCATGAGAGGGCCATGAAGAAGGTAGCCAAGGAGCTTGATCTTGTGTTTAATGGATGGCTAGAAGAGCACAAGCAGAGGAGGAAGATTTCAGGCCAAGTGAAGGGTGGTGATGATCAGCTTGATTTCATGGATGTGATGCTTTCCATTCTTGATGTTGATGGTGCTAATGAGATTACTTCAGATTATGATGCTGATACTGTCAACAAAGCAACTTCCATGGCTCTTATAGTAGCCGGCGTAGAGGCGCCTGCGGTGCAGATGACATGGGCTCTGGCTTTACTTCTCAACAACCGCGAAGCTCTCAAGAAGGCCCAGGAAGAGCTAGACCAAATCATTGGTAAAGACAGACAAGTGAAGGAATCAGACATCAAGAACTTGGTCTATCTCCAAGCCATTATTAAAGAATCAATGCGTTTATACCCTGCTGGACCATTATCCCTGCCTCACGAGTCGACTGAAGATTGCATGGTCGGTGACTATCATGTCCCGGCAGGCACGCGCCTCCTTGTTAACCTTTCAAAGCTTCATCGAGACCCAAGGGTTTGGTCCGATCCGAATGAGTTTCGACCAGAGCGATTTCTCACAACCCACAAGAGCTTTGACGTTAAGGGTCATGATTTCGAGTTAATTCCATTTGGAAGTGGTAGAAGAATGTGTCCTGGAATGTCACTTGCCCTTAAGGTTATAGCATTAACACTTGCTTCTTTGCTTCACGGTTTTGAAATTGGAACTCCAACGGATGAAACGGTCGACATGGGTGAGACGGTGGGAGTGACCAACAATAAAGCTACCCCACTTGAAGTCCTTTTCACTCCACGCCTTCCTGCTCAACTATACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00980 ko00981 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map00981 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

568

Amino Acids

63.71

Weight (kDa)

8.27

Isoelectric Point (pI)

38.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1343
AccB1I	GGYRCC	1 cut(s)	1105
AccB7I	CCANNNNNTGG	1 cut(s)	218
AccI	GTMKAC	2 cut(s)	1313, 1611
AccII	CGCG	2 cut(s)	1155, 1360
AciI	CCGC	4 cut(s)	431, 538, 1112, 1153
AclWI	GGATC	1 cut(s)	1406
AcoI	YGGCCR	2 cut(s)	241, 859
AcsI	RAATTY	2 cut(s)	422, 742
AcuI	CTGAAG	3 cut(s)	454, 1023, 1338
AcyI	GRCGYC	2 cut(s)	581, 1106
AfaI	GTAC	2 cut(s)	631, 782
AfiI	CCNNNNNNNGG	6 cut(s)	94, 218, 239, 840, 868, 961
AflII	CTTAAG	1 cut(s)	1538
AflIII	ACRYGT	1 cut(s)	556
AgsI	TTSAA	5 cut(s)	74, 267, 1380, 1583, 1661
AjnI	CCWGG	3 cut(s)	833, 1173, 1519
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
Alw21I	GWGCWC	1 cut(s)	930
Alw26I	GTCTC	3 cut(s)	770, 1386, 1616
AlwI	GGATC	1 cut(s)	1406
Ama87I	CYCGRG	1 cut(s)	542
AoxI	GGCC	8 cut(s)	230, 241, 311, 444, 859, 870, 952, 1170
ApeKI	GCWGC	4 cut(s)	4, 146, 149, 360
ApoI	RAATTY	2 cut(s)	422, 742
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
AspLEI	GCGC	2 cut(s)	1108, 1362
AspS9I	GGNCC	5 cut(s)	311, 870, 1171, 1289, 1407
AsuC2I	CCSGG	1 cut(s)	1349
AsuHPI	GGTGA	4 cut(s)	198, 980, 1346, 1631
AsuII	TTCGAA	1 cut(s)	638
AvaI	CYCGRG	1 cut(s)	542
AvaII	GGWCC	2 cut(s)	1289, 1407
BalI	TGGCCA	1 cut(s)	861
BanI	GGYRCC	1 cut(s)	1105
BanII	GRGCYC	1 cut(s)	1132
BarI	GAAGNNNNNNTAC	2 cut(s)	764, 796
BauI	CACGAG	1 cut(s)	1307
Bbv12I	GWGCWC	1 cut(s)	930
BbvI	GCAGC	3 cut(s)	136, 158, 372
BccI	CCATC	2 cut(s)	909, 1013
BciT130I	CCWGG	3 cut(s)	835, 1175, 1521
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	1349
BcoDI	GTCTC	3 cut(s)	770, 1386, 1616
BfaI	CTAG	5 cut(s)	12, 257, 411, 920, 1184
BfoI	RGCGCY	1 cut(s)	1109
BfrI	CTTAAG	1 cut(s)	1538
BisI	GCNGC	6 cut(s)	5, 147, 150, 361, 432, 538
BlsI	GCNGC	6 cut(s)	6, 148, 151, 362, 433, 539
Bme1390I	CCNGG	4 cut(s)	835, 1175, 1349, 1521
Bme18I	GGWCC	2 cut(s)	1289, 1407
BmeT110I	CYCGRG	1 cut(s)	542
BmgT120I	GGNCC	5 cut(s)	311, 870, 1171, 1289, 1407
BmiI	GGNNCC	1 cut(s)	1107
BmrFI	CCNGG	4 cut(s)	835, 1175, 1349, 1521
BmsI	GCATC	6 cut(s)	5, 537, 596, 814, 987, 1039
BplI	GAGNNNNNCTC	2 cut(s)	512, 544
Bpu14I	TTCGAA	1 cut(s)	638
BpuEI	CTTGAG	2 cut(s)	539, 1148
BpuMI	CCSGG	1 cut(s)	1349
BsaHI	GRCGYC	2 cut(s)	581, 1106
BsaI	GGTCTC	1 cut(s)	1386
BsaJI	CCNNGG	5 cut(s)	833, 888, 1077, 1173, 1397
Bsc4I	CCNNNNNNNGG	6 cut(s)	94, 218, 239, 840, 868, 961
Bse118I	RCCGGY	1 cut(s)	1094
Bse1I	ACTGG	1 cut(s)	633
BseBI	CCWGG	3 cut(s)	835, 1175, 1521
BseDI	CCNNGG	5 cut(s)	833, 888, 1077, 1173, 1397
BseGI	GGATG	4 cut(s)	708, 920, 997, 1606
BseLI	CCNNNNNNNGG	6 cut(s)	94, 218, 239, 840, 868, 961
BseMII	CTCAG	3 cut(s)	291, 378, 785
BseNI	ACTGG	1 cut(s)	633
BseRI	GAGGAG	1 cut(s)	952
BseXI	GCAGC	3 cut(s)	136, 158, 372
BseYI	CCCAGC	2 cut(s)	88, 218
BsgI	GTGCAG	1 cut(s)	1136
Bsh1236I	CGCG	2 cut(s)	1155, 1360
Bsh1285I	CGRYCG	1 cut(s)	1611
BshFI	GGCC	8 cut(s)	232, 243, 313, 446, 861, 872, 954, 1172
BshNI	GGYRCC	1 cut(s)	1105
BsiEI	CGRYCG	1 cut(s)	1611
BsiHKAI	GWGCWC	1 cut(s)	930
BsiHKCI	CYCGRG	1 cut(s)	542
BsiSI	CCGG	2 cut(s)	1095, 1349
BslFI	GGGAC	2 cut(s)	820, 1331
BslI	CCNNNNNNNGG	6 cut(s)	94, 218, 239, 840, 868, 961
BsmAI	GTCTC	3 cut(s)	770, 1386, 1616
BsmBI	CGTCTC	2 cut(s)	770, 1616
BsmFI	GGGAC	2 cut(s)	820, 1331
BsnI	GGCC	8 cut(s)	232, 243, 313, 446, 861, 872, 954, 1172
Bso31I	GGTCTC	1 cut(s)	1386
BsoBI	CYCGRG	1 cut(s)	542
Bsp119I	TTCGAA	1 cut(s)	638
Bsp1286I	GDGCHC	2 cut(s)	930, 1132
Bsp143I	GATC	4 cut(s)	124, 898, 973, 1411
Bsp19I	CCATGG	1 cut(s)	1077
BspACI	CCGC	4 cut(s)	431, 538, 1112, 1153
BspANI	GGCC	8 cut(s)	232, 243, 313, 446, 861, 872, 954, 1172
BspCNI	CTCAG	3 cut(s)	292, 377, 786
BspFNI	CGCG	2 cut(s)	1155, 1360
BspHI	TCATGA	2 cut(s)	180, 1474
BspLI	GGNNCC	1 cut(s)	1107
BspPI	GGATC	1 cut(s)	1406
BspQI	GCTCTTC	2 cut(s)	918, 1173
BspT104I	TTCGAA	1 cut(s)	638
BspT107I	GGYRCC	1 cut(s)	1105
BspTI	CTTAAG	1 cut(s)	1538
BspTNI	GGTCTC	1 cut(s)	1386
BsrFI	RCCGGY	1 cut(s)	1094
BsrI	ACTGG	1 cut(s)	633
BssAI	RCCGGY	1 cut(s)	1094
BssECI	CCNNGG	5 cut(s)	833, 888, 1077, 1173, 1397
BssMI	GATC	4 cut(s)	124, 898, 973, 1411
BssNI	GRCGYC	2 cut(s)	581, 1106
BssSI	CACGAG	1 cut(s)	1307
BssT1I	CCWWGG	3 cut(s)	888, 1077, 1397
Bst2BI	CACGAG	1 cut(s)	1307
Bst2UI	CCWGG	3 cut(s)	835, 1175, 1521
Bst4CI	ACNGT	5 cut(s)	325, 1060, 1577, 1609, 1627
Bst6I	CTCTTC	4 cut(s)	182, 617, 918, 1173
BstACI	GRCGYC	2 cut(s)	581, 1106
BstAFI	CTTAAG	1 cut(s)	1538
BstBI	TTCGAA	1 cut(s)	638
BstC8I	GCNNGC	4 cut(s)	1096, 1110, 1354, 1358
BstDEI	CTNAG	3 cut(s)	300, 364, 794
BstDSI	CCRYGG	1 cut(s)	1077
BstENI	CCTNNNNNAGG	1 cut(s)	838
BstF5I	GGATG	4 cut(s)	708, 920, 997, 1606
BstFNI	CGCG	2 cut(s)	1155, 1360
BstH2I	RGCGCY	1 cut(s)	1109
BstHHI	GCGC	2 cut(s)	1108, 1362
BstKTI	GATC	4 cut(s)	127, 901, 976, 1414
BstMAI	GTCTC	3 cut(s)	770, 1386, 1616
BstMBI	GATC	4 cut(s)	124, 898, 973, 1411
BstMCI	CGRYCG	1 cut(s)	1611
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 480, 501, 925, 1114
BstNI	CCWGG	3 cut(s)	835, 1175, 1521
BstSCI	CCNGG	4 cut(s)	833, 1173, 1347, 1519
BstUI	CGCG	2 cut(s)	1155, 1360
BstV1I	GCAGC	3 cut(s)	136, 158, 372
BstXI	CCANNNNNNTGG	2 cut(s)	1196, 1404
BsuRI	GGCC	8 cut(s)	232, 243, 313, 446, 861, 872, 954, 1172
BtgI	CCRYGG	1 cut(s)	1077
BtgZI	GCGATG	1 cut(s)	619
BtsCI	GGATG	4 cut(s)	708, 920, 997, 1606
Cac8I	GCNNGC	4 cut(s)	1096, 1110, 1354, 1358
CciI	TCATGA	2 cut(s)	180, 1474
CfoI	GCGC	2 cut(s)	1108, 1362
Cfr10I	RCCGGY	1 cut(s)	1094
Cfr13I	GGNCC	5 cut(s)	311, 870, 1171, 1289, 1407
CseI	GACGC	1 cut(s)	570
Csp6I	GTAC	2 cut(s)	630, 781
CviQI	GTAC	2 cut(s)	630, 781
DdeI	CTNAG	3 cut(s)	300, 364, 794
DinI	GGCGCC	1 cut(s)	1107
DpnI	GATC	4 cut(s)	126, 900, 975, 1413
DpnII	GATC	4 cut(s)	124, 898, 973, 1411
DraI	TTTAAA	1 cut(s)	768
DrdI	GACNNNNNNGTC	1 cut(s)	1343
DseDI	GACNNNNNNGTC	1 cut(s)	1343
EaeI	YGGCCR	2 cut(s)	241, 859
Eam1104I	CTCTTC	4 cut(s)	182, 617, 918, 1173
EarI	CTCTTC	4 cut(s)	182, 617, 918, 1173
Eco130I	CCWWGG	3 cut(s)	888, 1077, 1397
Eco24I	GRGCYC	1 cut(s)	1132
Eco31I	GGTCTC	1 cut(s)	1386
Eco47I	GGWCC	2 cut(s)	1289, 1407
Eco57I	CTGAAG	3 cut(s)	454, 1023, 1338
Eco88I	CYCGRG	1 cut(s)	542
EcoNI	CCTNNNNNAGG	1 cut(s)	838
EcoRII	CCWGG	3 cut(s)	833, 1173, 1519
EcoT14I	CCWWGG	3 cut(s)	888, 1077, 1397
EcoT38I	GRGCYC	1 cut(s)	1132
EgeI	GGCGCC	1 cut(s)	1107
EheI	GGCGCC	1 cut(s)	1107
ErhI	CCWWGG	3 cut(s)	888, 1077, 1397
Esp3I	CGTCTC	2 cut(s)	770, 1616
FaqI	GGGAC	2 cut(s)	820, 1331
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	2 cut(s)	1313, 1611
Fnu4HI	GCNGC	6 cut(s)	5, 147, 150, 361, 432, 538
FokI	GGATG	4 cut(s)	715, 927, 1004, 1613
FriOI	GRGCYC	1 cut(s)	1132
Fsp4HI	GCNGC	6 cut(s)	5, 147, 150, 361, 432, 538
FspBI	CTAG	5 cut(s)	12, 257, 411, 920, 1184
GlaI	GCGC	2 cut(s)	1107, 1361
GluI	GCNGC	6 cut(s)	5, 147, 150, 361, 432, 538
GsaI	CCCAGC	2 cut(s)	92, 222
HaeII	RGCGCY	1 cut(s)	1109
HaeIII	GGCC	8 cut(s)	232, 243, 313, 446, 861, 872, 954, 1172
HapII	CCGG	2 cut(s)	1095, 1349
HgaI	GACGC	1 cut(s)	570
HhaI	GCGC	2 cut(s)	1108, 1362
Hin1I	GRCGYC	2 cut(s)	581, 1106
Hin6I	GCGC	2 cut(s)	1106, 1360
HinP1I	GCGC	2 cut(s)	1106, 1360
HincII	GTYRAC	4 cut(s)	1063, 1314, 1372, 1612
HindII	GTYRAC	4 cut(s)	1063, 1314, 1372, 1612
HindIII	AAGCTT	1 cut(s)	1382
HinfI	GANTC	5 cut(s)	566, 829, 1220, 1265, 1310
HpaI	GTTAAC	1 cut(s)	1372
HpaII	CCGG	2 cut(s)	1095, 1349
HphI	GGTGA	4 cut(s)	198, 980, 1346, 1631
Hpy166II	GTNNAC	4 cut(s)	1063, 1314, 1372, 1612
Hpy8I	GTNNAC	4 cut(s)	1063, 1314, 1372, 1612
HpyAV	CCTTC	8 cut(s)	478, 571, 766, 874, 955, 1162, 1210, 1691
HpyCH4III	ACNGT	5 cut(s)	325, 1060, 1577, 1609, 1627
HpyCH4IV	ACGT	3 cut(s)	558, 779, 1464
HpyCH4V	TGCA	5 cut(s)	7, 227, 340, 1117, 1326
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 480, 501, 925, 1114
HpyF3I	CTNAG	3 cut(s)	300, 364, 794
HpySE526I	ACGT	3 cut(s)	558, 779, 1464
Hsp92I	GRCGYC	2 cut(s)	581, 1106
HspAI	GCGC	2 cut(s)	1106, 1360
KasI	GGCGCC	1 cut(s)	1105
KroI	GCCGGC	1 cut(s)	1094
KroNI	GCCGGC	1 cut(s)	1096
Ksp22I	TGATCA	1 cut(s)	973
KspAI	GTTAAC	1 cut(s)	1372
Kzo9I	GATC	4 cut(s)	124, 898, 973, 1411
LguI	GCTCTTC	2 cut(s)	918, 1173
LmnI	GCTCC	2 cut(s)	50, 892
Lsp1109I	GCAGC	3 cut(s)	136, 158, 372
LweI	GCATC	6 cut(s)	5, 537, 596, 814, 987, 1039
MaeI	CTAG	5 cut(s)	12, 257, 411, 920, 1184
MaeII	ACGT	3 cut(s)	558, 779, 1464
MaeIII	GTNAC	6 cut(s)	29, 610, 755, 1334, 1527, 1633
MalI	GATC	4 cut(s)	126, 900, 975, 1413
MboI	GATC	4 cut(s)	124, 898, 973, 1411
MfeI	CAATTG	1 cut(s)	69
MhlI	GDGCHC	2 cut(s)	930, 1132
MlsI	TGGCCA	1 cut(s)	861
MluCI	AATT	5 cut(s)	69, 422, 742, 1488, 1584
MluNI	TGGCCA	1 cut(s)	861
Mly113I	GGCGCC	1 cut(s)	1106
MlyI	GAGTC	1 cut(s)	1319
MmeI	TCCRAC	3 cut(s)	555, 828, 1619
Mox20I	TGGCCA	1 cut(s)	861
MroNI	GCCGGC	1 cut(s)	1094
MscI	TGGCCA	1 cut(s)	861
MseI	TTAA	9 cut(s)	105, 767, 909, 1260, 1371, 1467, 1487, 1539, 1553
MslI	CAYNNNNRTG	1 cut(s)	992
Msp20I	TGGCCA	1 cut(s)	861
MspA1I	CMGCKG	1 cut(s)	149
MspCI	CTTAAG	1 cut(s)	1538
MspI	CCGG	2 cut(s)	1095, 1349
MspR9I	CCNGG	4 cut(s)	835, 1175, 1349, 1521
MunI	CAATTG	1 cut(s)	69
MvaI	CCWGG	3 cut(s)	835, 1175, 1521
MvnI	CGCG	2 cut(s)	1155, 1360
MwoI	GCNNNNNNNGC	5 cut(s)	224, 480, 501, 925, 1114
NaeI	GCCGGC	1 cut(s)	1096
NarI	GGCGCC	1 cut(s)	1106
NciI	CCSGG	1 cut(s)	1349
NcoI	CCATGG	1 cut(s)	1077
NdeII	GATC	4 cut(s)	124, 898, 973, 1411
NgoMIV	GCCGGC	1 cut(s)	1094
NlaIV	GGNNCC	1 cut(s)	1107
NmuCI	GTSAC	5 cut(s)	29, 610, 1334, 1527, 1633
NspV	TTCGAA	1 cut(s)	638
PaeR7I	CTCGAG	1 cut(s)	542
PagI	TCATGA	2 cut(s)	180, 1474
PciSI	GCTCTTC	2 cut(s)	918, 1173
PcsI	WCGNNNNNNNCGW	3 cut(s)	606, 644, 1432
PdiI	GCCGGC	1 cut(s)	1096
PfeI	GAWTC	4 cut(s)	566, 829, 1220, 1265
PflMI	CCANNNNNTGG	1 cut(s)	218
PfoI	TCCNGGA	1 cut(s)	1519
PkrI	GCNGC	6 cut(s)	6, 148, 151, 362, 433, 539
PleI	GAGTC	1 cut(s)	1318
PluTI	GGCGCC	1 cut(s)	1109
PpsI	GAGTC	1 cut(s)	1318
Psp6I	CCWGG	3 cut(s)	833, 1173, 1519
PspFI	CCCAGC	2 cut(s)	88, 218
PspGI	CCWGG	3 cut(s)	833, 1173, 1519
PspN4I	GGNNCC	1 cut(s)	1107
PspPI	GGNCC	5 cut(s)	311, 870, 1171, 1289, 1407
PsrI	GAACNNNNNNTAC	2 cut(s)	619, 651
PvuII	CAGCTG	1 cut(s)	149
RsaI	GTAC	2 cut(s)	631, 782
RsaNI	GTAC	2 cut(s)	630, 781
RseI	CAYNNNNRTG	1 cut(s)	992
SalI	GTCGAC	2 cut(s)	1312, 1610
SapI	GCTCTTC	2 cut(s)	918, 1173
SaqAI	TTAA	9 cut(s)	105, 767, 909, 1260, 1371, 1467, 1487, 1539, 1553
SatI	GCNGC	6 cut(s)	5, 147, 150, 361, 432, 538
Sau3AI	GATC	4 cut(s)	124, 898, 973, 1411
Sau96I	GGNCC	5 cut(s)	311, 870, 1171, 1289, 1407
SchI	GAGTC	1 cut(s)	1319
ScrFI	CCNGG	4 cut(s)	835, 1175, 1349, 1521
SduI	GDGCHC	2 cut(s)	930, 1132
SfaNI	GCATC	6 cut(s)	5, 537, 596, 814, 987, 1039
SfoI	GGCGCC	1 cut(s)	1107
Sfr274I	CTCGAG	1 cut(s)	542
SfuI	TTCGAA	1 cut(s)	638
SinI	GGWCC	2 cut(s)	1289, 1407
SlaI	CTCGAG	1 cut(s)	542
SmiMI	CAYNNNNRTG	1 cut(s)	992
SmlI	CTYRAG	4 cut(s)	518, 542, 1163, 1538
SmoI	CTYRAG	4 cut(s)	518, 542, 1163, 1538
Sse9I	AATT	5 cut(s)	69, 422, 742, 1488, 1584
SsiI	CCGC	4 cut(s)	431, 538, 1112, 1153
SspDI	GGCGCC	1 cut(s)	1105
SspMI	CTAG	5 cut(s)	12, 257, 411, 920, 1184
StyD4I	CCNGG	4 cut(s)	833, 1173, 1347, 1519
StyI	CCWWGG	3 cut(s)	888, 1077, 1397
TaaI	ACNGT	5 cut(s)	325, 1060, 1577, 1609, 1627
TaiI	ACGT	3 cut(s)	561, 782, 1467
TaqI	TCGA	8 cut(s)	543, 562, 638, 1313, 1390, 1426, 1482, 1611
TasI	AATT	5 cut(s)	69, 422, 742, 1488, 1584
TauI	GCSGC	2 cut(s)	434, 540
TfiI	GAWTC	4 cut(s)	566, 829, 1220, 1265
Tru1I	TTAA	9 cut(s)	105, 767, 909, 1260, 1371, 1467, 1487, 1539, 1553
Tru9I	TTAA	9 cut(s)	105, 767, 909, 1260, 1371, 1467, 1487, 1539, 1553
TseFI	GTSAC	5 cut(s)	29, 610, 1334, 1527, 1633
TseI	GCWGC	4 cut(s)	4, 146, 149, 360
Tsp45I	GTSAC	5 cut(s)	29, 610, 1334, 1527, 1633
TspDTI	ATGAA	9 cut(s)	169, 197, 415, 602, 699, 890, 976, 1376, 1617
TspGWI	ACGGA	1 cut(s)	1613
Van91I	CCANNNNNTGG	1 cut(s)	218
Vha464I	CTTAAG	1 cut(s)	1538
VpaK11BI	GGWCC	2 cut(s)	1289, 1407
XagI	CCTNNNNNAGG	1 cut(s)	838
XapI	RAATTY	2 cut(s)	422, 742
XcmI	CCANNNNNNNNNTGG	1 cut(s)	962
XhoI	CTCGAG	1 cut(s)	542
XmiI	GTMKAC	2 cut(s)	1313, 1611
XspI	CTAG	5 cut(s)	12, 257, 411, 920, 1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.