Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003712.1

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Reverse (-)

87506 .. 89599

Gene Structure 2094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003712.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

atggagatggagtactcccatctcttacctgttgttttggccttttcaataatatttctctactctctgatactaaaatactcctcaagggtagcgagaaaactcaaccttccaccgcaagccggcggcgctaggccaataatcggccacctccacttattgagaggctcatcagaaccagcccacatagtgttgggtaagatggccgatcagtacggacccatcttcactatgaagatggggatgaagagaaccatagtcgtcagcaactcggaaatggccaaggagtgtttaaagacaaatgacgtcgtcttcgccagccgtccgaagagtctagccagagaaaccctcggctacgacggtgccttctttgtcttcagccgttacgaccactacttccgtaagatacggaggatagtcatgaaggaagccttgtccagccaccgcctcgaaaccctaaaacacattcgggaatccgaagtaaaggcggcgataaagggaatcttcgacagaatcaggaggagggatgctggtggttcgaattcggagaaggattccggggtggtggtggagatggaagaatggtttgagggcataaacgagaacgtgatatttcggatgatagtagggaaacgattttcggaagctgggaagatcttaaactctgagaaaggtgatttgattttgagggagaagattaggggatatgtgaaattgcttgcggctttcgcagtgtccgatacgattccattcttgaggtggttggacttgtttagggttaagagagagatgaagaagatggctaaagaggtggacgttctgcttgaaggatggttggaagagcataagcagaagaggaagatgaataactcaaagggtgatggtgatgataatgaggagagagatttcatggatgcgatgatttcaattctagatggtgaagacaatgttacttctacttatgatgctgatactatcaataaagctgtctccttgaccattatcttaggaggtatagatactataactgggacattgacatggattctgactttacttctcaacaaccgcggagtgctaaagacggctcaacaagagttagataaacatgttggtagagagaggcaagtcaaggaatcagacactgaaaacttggtttatctccaagccgttatcaaagaaaccctgcgcttataccctcctggaccaatcccaaggcctgatcacgagtccacggaagactgcgtcgtcggcggctaccatatcccagcaaaaactcgcctcgtgataaatatttccaagattcaacgtgatccgaaggtgtggcctgacccgaatgggtttcgacctgagaggtttctcacaactcacaagagcgttgatgtcagaggtcaggattttgagttgatacccttcagcagtggtagaagaatttgtcctggaatgtatcttgccttaaagagtatgcctcttctactcgcttctttgcttcatggttttgaactttcgaccctaggggatgagccggttgacatgagtgaggcagggggactgaccaaccataaagctggcaaagttgaagtctttctcactccacgccttcccgctcgactctatgagcattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00980 ko00981 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map00981 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

541

Amino Acids

61.31

Weight (kDa)

8.97

Isoelectric Point (pI)

42.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1247
AatII	GACGTC	1 cut(s)	309
AccB1I	GGYRCC	1 cut(s)	362
AccBSI	CCGCTC	1 cut(s)	1607
AccII	CGCG	1 cut(s)	1071
AciI	CCGC	9 cut(s)	116, 126, 445, 488, 722, 1069, 1071, 1254, 1605
AclWI	GGATC	1 cut(s)	1307
AcoI	YGGCCR	3 cut(s)	145, 204, 279
AcsI	RAATTY	2 cut(s)	541, 1431
AcuI	CTGAAG	2 cut(s)	361, 1399
AcyI	GRCGYC	1 cut(s)	306
AdeI	CACNNNGTG	1 cut(s)	190
AfaI	GTAC	2 cut(s)	14, 215
AfiI	CCNNNNNNNGG	2 cut(s)	122, 143
AflIII	ACRYGT	1 cut(s)	1108
AgsI	TTSAA	6 cut(s)	48, 827, 927, 1307, 1502, 1580
AjnI	CCWGG	2 cut(s)	1201, 1438
AluBI	AGCT	3 cut(s)	647, 986, 1568
AluI	AGCT	3 cut(s)	647, 986, 1568
Alw26I	GTCTC	1 cut(s)	994
AlwI	GGATC	1 cut(s)	1307
AlwNI	CAGNNNCTG	1 cut(s)	1145
AoxI	GGCC	7 cut(s)	39, 134, 145, 204, 279, 1217, 1325
ApoI	RAATTY	2 cut(s)	541, 1431
ArsI	GACNNNNNNTTYG	4 cut(s)	296, 328, 1566, 1598
Asp700I	GAANNNNTTC	1 cut(s)	1584
AspA2I	CCTAGG	1 cut(s)	1513
AspLEI	GCGC	2 cut(s)	131, 1191
AspS9I	GGNCC	2 cut(s)	218, 1205
AsuC2I	CCSGG	1 cut(s)	559
AsuHPI	GGTGA	4 cut(s)	686, 890, 896, 950
AsuII	TTCGAA	1 cut(s)	539
AvaII	GGWCC	2 cut(s)	218, 1205
AvrII	CCTAGG	1 cut(s)	1513
BalI	TGGCCA	1 cut(s)	281
BanI	GGYRCC	1 cut(s)	362
BauI	CACGAG	2 cut(s)	1226, 1283
BbsI	GAAGAC	4 cut(s)	304, 367, 948, 1245
BccI	CCATC	9 cut(s)	27, 196, 230, 232, 568, 793, 825, 875, 929
BceAI	ACGGC	4 cut(s)	306, 366, 1101, 1154
BciT130I	CCWGG	2 cut(s)	1203, 1440
BclI	TGATCA	1 cut(s)	1222
BcnI	CCSGG	1 cut(s)	559
BcoDI	GTCTC	1 cut(s)	994
BfaI	CTAG	4 cut(s)	132, 335, 932, 1514
BfoI	RGCGCY	1 cut(s)	132
BglII	AGATCT	1 cut(s)	654
BisI	GCNGC	4 cut(s)	127, 489, 723, 1255
BlnI	CCTAGG	1 cut(s)	1513
BlsI	GCNGC	4 cut(s)	128, 490, 724, 1256
BmcAI	AGTACT	1 cut(s)	14
Bme1390I	CCNGG	3 cut(s)	559, 1203, 1440
Bme18I	GGWCC	2 cut(s)	218, 1205
BmgT120I	GGNCC	2 cut(s)	218, 1205
BmiI	GGNNCC	2 cut(s)	220, 364
BmrFI	CCNGG	3 cut(s)	559, 1203, 1440
BmrI	ACTGGG	1 cut(s)	1038
BmsI	GCATC	3 cut(s)	517, 904, 955
BmuI	ACTGGG	1 cut(s)	1038
BpiI	GAAGAC	4 cut(s)	304, 367, 948, 1245
BplI	GAGNNNNNCTC	4 cut(s)	333, 365, 1453, 1485
Bpu14I	TTCGAA	1 cut(s)	539
BpuEI	CTTGAG	2 cut(s)	70, 775
BpuMI	CCSGG	1 cut(s)	559
BsaHI	GRCGYC	1 cut(s)	306
BsaJI	CCNNGG	7 cut(s)	282, 349, 558, 1069, 1214, 1233, 1513
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	2 cut(s)	122, 143
Bse118I	RCCGGY	2 cut(s)	122, 1525
Bse1I	ACTGG	1 cut(s)	1033
BseBI	CCWGG	2 cut(s)	1203, 1440
BseDI	CCNNGG	7 cut(s)	282, 349, 558, 1069, 1214, 1233, 1513
BseGI	GGATG	6 cut(s)	249, 532, 624, 836, 919, 1525
BseLI	CCNNNNNNNGG	2 cut(s)	122, 143
BseMII	CTCAG	2 cut(s)	657, 1341
BseNI	ACTGG	1 cut(s)	1033
BseRI	GAGGAG	3 cut(s)	73, 535, 911
BseYI	CCCAGC	2 cut(s)	647, 1267
Bsh1236I	CGCG	1 cut(s)	1071
BshFI	GGCC	7 cut(s)	41, 136, 147, 206, 281, 1219, 1327
BshNI	GGYRCC	1 cut(s)	362
BsiSI	CCGG	3 cut(s)	123, 558, 1526
BslFI	GGGAC	2 cut(s)	1045, 1563
BslI	CCNNNNNNNGG	2 cut(s)	122, 143
BsmAI	GTCTC	1 cut(s)	994
BsmFI	GGGAC	2 cut(s)	1045, 1563
BsnI	GGCC	7 cut(s)	41, 136, 147, 206, 281, 1219, 1327
Bsp119I	TTCGAA	1 cut(s)	539
Bsp143I	GATC	4 cut(s)	208, 654, 1222, 1312
BspACI	CCGC	9 cut(s)	116, 126, 445, 488, 722, 1069, 1071, 1254, 1605
BspANI	GGCC	7 cut(s)	41, 136, 147, 206, 281, 1219, 1327
BspCNI	CTCAG	2 cut(s)	658, 1342
BspFNI	CGCG	1 cut(s)	1071
BspHI	TCATGA	1 cut(s)	420
BspLI	GGNNCC	2 cut(s)	220, 364
BspPI	GGATC	1 cut(s)	1307
BspQI	GCTCTTC	1 cut(s)	834
BspT104I	TTCGAA	1 cut(s)	539
BspT107I	GGYRCC	1 cut(s)	362
BsrBI	CCGCTC	1 cut(s)	1607
BsrFI	RCCGGY	2 cut(s)	122, 1525
BsrI	ACTGG	1 cut(s)	1033
BssAI	RCCGGY	2 cut(s)	122, 1525
BssECI	CCNNGG	7 cut(s)	282, 349, 558, 1069, 1214, 1233, 1513
BssMI	GATC	4 cut(s)	208, 654, 1222, 1312
BssNI	GRCGYC	1 cut(s)	306
BssSI	CACGAG	2 cut(s)	1226, 1283
BssT1I	CCWWGG	3 cut(s)	282, 1214, 1513
Bst2BI	CACGAG	2 cut(s)	1226, 1283
Bst2UI	CCWGG	2 cut(s)	1203, 1440
Bst4CI	ACNGT	1 cut(s)	362
Bst6I	CTCTTC	5 cut(s)	242, 323, 834, 848, 1476
BstACI	GRCGYC	1 cut(s)	306
BstBI	TTCGAA	1 cut(s)	539
BstC8I	GCNNGC	5 cut(s)	120, 124, 319, 720, 1570
BstDEI	CTNAG	3 cut(s)	666, 1006, 1350
BstDSI	CCRYGG	2 cut(s)	1069, 1233
BstF5I	GGATG	6 cut(s)	249, 532, 624, 836, 919, 1525
BstFNI	CGCG	1 cut(s)	1071
BstH2I	RGCGCY	1 cut(s)	132
BstHHI	GCGC	2 cut(s)	131, 1191
BstKTI	GATC	4 cut(s)	211, 657, 1225, 1315
BstMAI	GTCTC	1 cut(s)	994
BstMBI	GATC	4 cut(s)	208, 654, 1222, 1312
BstMWI	GCNNNNNNNGC	3 cut(s)	128, 728, 1251
BstNI	CCWGG	2 cut(s)	1203, 1440
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	3 cut(s)	557, 1201, 1438
BstUI	CGCG	1 cut(s)	1071
BstV2I	GAAGAC	4 cut(s)	304, 367, 948, 1245
BstX2I	RGATCY	1 cut(s)	654
BstXI	CCANNNNNNTGG	1 cut(s)	1568
BstYI	RGATCY	1 cut(s)	654
BsuRI	GGCC	7 cut(s)	41, 136, 147, 206, 281, 1219, 1327
BtgI	CCRYGG	2 cut(s)	1069, 1233
BtgZI	GCGATG	1 cut(s)	932
BtsCI	GGATG	6 cut(s)	249, 532, 624, 836, 919, 1525
BtsI	GCAGTG	2 cut(s)	738, 1426
BtsIMutI	CAGTG	3 cut(s)	738, 1143, 1426
Cac8I	GCNNGC	5 cut(s)	120, 124, 319, 720, 1570
CaiI	CAGNNNCTG	1 cut(s)	1145
CciI	TCATGA	1 cut(s)	420
CfoI	GCGC	2 cut(s)	131, 1191
Cfr10I	RCCGGY	2 cut(s)	122, 1525
Cfr13I	GGNCC	2 cut(s)	218, 1205
Cfr42I	CCGCGG	1 cut(s)	1072
CseI	GACGC	1 cut(s)	1234
Csp6I	GTAC	2 cut(s)	13, 214
CviAII	CATG	6 cut(s)	421, 910, 1041, 1109, 1493, 1534
CviQI	GTAC	2 cut(s)	13, 214
DdeI	CTNAG	3 cut(s)	666, 1006, 1350
DpnI	GATC	4 cut(s)	210, 656, 1224, 1314
DpnII	GATC	4 cut(s)	208, 654, 1222, 1312
DraI	TTTAAA	1 cut(s)	294
DraIII	CACNNNGTG	1 cut(s)	190
DrdI	GACNNNNNNGTC	1 cut(s)	1247
DseDI	GACNNNNNNGTC	1 cut(s)	1247
EaeI	YGGCCR	3 cut(s)	145, 204, 279
Eam1104I	CTCTTC	5 cut(s)	242, 323, 834, 848, 1476
EarI	CTCTTC	5 cut(s)	242, 323, 834, 848, 1476
Eco130I	CCWWGG	3 cut(s)	282, 1214, 1513
Eco147I	AGGCCT	1 cut(s)	1219
Eco47I	GGWCC	2 cut(s)	218, 1205
Eco57I	CTGAAG	2 cut(s)	361, 1399
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	2 cut(s)	1201, 1438
EcoT14I	CCWWGG	3 cut(s)	282, 1214, 1513
ErhI	CCWWGG	3 cut(s)	282, 1214, 1513
FaeI	CATG	6 cut(s)	424, 913, 1044, 1112, 1496, 1537
FalI	AAGNNNNNCTT	4 cut(s)	416, 448, 488, 520
FaqI	GGGAC	2 cut(s)	1045, 1563
FatI	CATG	6 cut(s)	420, 909, 1040, 1108, 1492, 1533
FauI	CCCGC	1 cut(s)	1612
FbaI	TGATCA	1 cut(s)	1222
Fnu4HI	GCNGC	4 cut(s)	127, 489, 723, 1255
FokI	GGATG	6 cut(s)	256, 539, 631, 843, 926, 1532
Fsp4HI	GCNGC	4 cut(s)	127, 489, 723, 1255
FspBI	CTAG	4 cut(s)	132, 335, 932, 1514
GlaI	GCGC	2 cut(s)	130, 1190
GluI	GCNGC	4 cut(s)	127, 489, 723, 1255
GsaI	CCCAGC	2 cut(s)	651, 1271
HaeII	RGCGCY	1 cut(s)	132
HaeIII	GGCC	7 cut(s)	41, 136, 147, 206, 281, 1219, 1327
HapII	CCGG	3 cut(s)	123, 558, 1526
HgaI	GACGC	1 cut(s)	1234
HhaI	GCGC	2 cut(s)	131, 1191
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	6 cut(s)	424, 913, 1044, 1112, 1496, 1537
Hin6I	GCGC	2 cut(s)	129, 1189
HinP1I	GCGC	2 cut(s)	129, 1189
HincII	GTYRAC	1 cut(s)	1531
HindII	GTYRAC	1 cut(s)	1531
HpaII	CCGG	3 cut(s)	123, 558, 1526
HphI	GGTGA	4 cut(s)	686, 890, 896, 950
Hpy166II	GTNNAC	3 cut(s)	814, 1233, 1531
Hpy188III	TCNNGA	8 cut(s)	421, 470, 517, 754, 932, 1226, 1285, 1394
Hpy8I	GTNNAC	3 cut(s)	814, 1233, 1531
Hpy99I	CGWCG	4 cut(s)	311, 362, 1250, 1253
HpyAV	CCTTC	8 cut(s)	119, 376, 418, 544, 821, 1312, 1423, 1610
HpyCH4III	ACNGT	1 cut(s)	362
HpyCH4IV	ACGT	4 cut(s)	306, 606, 816, 1309
HpyF10VI	GCNNNNNNNGC	3 cut(s)	128, 728, 1251
HpyF3I	CTNAG	3 cut(s)	666, 1006, 1350
HpySE526I	ACGT	4 cut(s)	306, 606, 816, 1309
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	6 cut(s)	424, 913, 1044, 1112, 1496, 1537
HspAI	GCGC	2 cut(s)	129, 1189
KroI	GCCGGC	1 cut(s)	122
KroNI	GCCGGC	1 cut(s)	124
Ksp22I	TGATCA	1 cut(s)	1222
KspI	CCGCGG	1 cut(s)	1072
Kzo9I	GATC	4 cut(s)	208, 654, 1222, 1312
LguI	GCTCTTC	1 cut(s)	834
LweI	GCATC	3 cut(s)	517, 904, 955
MaeI	CTAG	4 cut(s)	132, 335, 932, 1514
MaeII	ACGT	4 cut(s)	306, 606, 816, 1309
MaeIII	GTNAC	2 cut(s)	383, 949
MalI	GATC	4 cut(s)	210, 656, 1224, 1314
MbiI	CCGCTC	1 cut(s)	1607
MboI	GATC	4 cut(s)	208, 654, 1222, 1312
MflI	RGATCY	1 cut(s)	654
MlsI	TGGCCA	1 cut(s)	281
MluCI	AATT	4 cut(s)	541, 713, 927, 1431
MluNI	TGGCCA	1 cut(s)	281
MlyI	GAGTC	3 cut(s)	340, 1238, 1605
MmeI	TCCRAC	2 cut(s)	744, 816
Mox20I	TGGCCA	1 cut(s)	281
MroNI	GCCGGC	1 cut(s)	122
MroXI	GAANNNNTTC	1 cut(s)	1584
MscI	TGGCCA	1 cut(s)	281
MseI	TTAA	4 cut(s)	293, 659, 780, 1457
MslI	CAYNNNNRTG	1 cut(s)	1039
Msp20I	TGGCCA	1 cut(s)	281
MspA1I	CMGCKG	1 cut(s)	1071
MspI	CCGG	3 cut(s)	123, 558, 1526
MspR9I	CCNGG	3 cut(s)	559, 1203, 1440
MvaI	CCWGG	2 cut(s)	1203, 1440
MvnI	CGCG	1 cut(s)	1071
MwoI	GCNNNNNNNGC	3 cut(s)	128, 728, 1251
NaeI	GCCGGC	1 cut(s)	124
NciI	CCSGG	1 cut(s)	559
NdeII	GATC	4 cut(s)	208, 654, 1222, 1312
NgoMIV	GCCGGC	1 cut(s)	122
NlaIII	CATG	6 cut(s)	424, 913, 1044, 1112, 1496, 1537
NlaIV	GGNNCC	2 cut(s)	220, 364
NmeAIII	GCCGAG	1 cut(s)	330
NspI	RCATGY	1 cut(s)	1112
NspV	TTCGAA	1 cut(s)	539
PagI	TCATGA	1 cut(s)	420
PceI	AGGCCT	1 cut(s)	1219
PciI	ACATGT	1 cut(s)	1108
PciSI	GCTCTTC	1 cut(s)	834
PcsI	WCGNNNNNNNCGW	1 cut(s)	735
PdiI	GCCGGC	1 cut(s)	124
PdmI	GAANNNNTTC	1 cut(s)	1584
PfeI	GAWTC	8 cut(s)	473, 501, 513, 554, 745, 1045, 1136, 1303
PflFI	GACNNNGTC	2 cut(s)	308, 1244
PfoI	TCCNGGA	2 cut(s)	1201, 1438
PkrI	GCNGC	4 cut(s)	128, 490, 724, 1256
PleI	GAGTC	3 cut(s)	339, 1237, 1605
PpsI	GAGTC	3 cut(s)	339, 1237, 1605
PscI	ACATGT	1 cut(s)	1108
Psp6I	CCWGG	2 cut(s)	1201, 1438
PspFI	CCCAGC	2 cut(s)	647, 1267
PspGI	CCWGG	2 cut(s)	1201, 1438
PspN4I	GGNNCC	2 cut(s)	220, 364
PspPI	GGNCC	2 cut(s)	218, 1205
PstNI	CAGNNNCTG	1 cut(s)	1145
PsuI	RGATCY	1 cut(s)	654
PsyI	GACNNNGTC	2 cut(s)	308, 1244
RsaI	GTAC	2 cut(s)	14, 215
RsaNI	GTAC	2 cut(s)	13, 214
RseI	CAYNNNNRTG	1 cut(s)	1039
SacII	CCGCGG	1 cut(s)	1072
SapI	GCTCTTC	1 cut(s)	834
SaqAI	TTAA	4 cut(s)	293, 659, 780, 1457
SatI	GCNGC	4 cut(s)	127, 489, 723, 1255
Sau3AI	GATC	4 cut(s)	208, 654, 1222, 1312
Sau96I	GGNCC	2 cut(s)	218, 1205
ScaI	AGTACT	1 cut(s)	14
SchI	GAGTC	3 cut(s)	340, 1238, 1605
ScrFI	CCNGG	3 cut(s)	559, 1203, 1440
SfaNI	GCATC	3 cut(s)	517, 904, 955
Sfr303I	CCGCGG	1 cut(s)	1072
SfuI	TTCGAA	1 cut(s)	539
SgrBI	CCGCGG	1 cut(s)	1072
SinI	GGWCC	2 cut(s)	218, 1205
SmiMI	CAYNNNNRTG	1 cut(s)	1039
SmlI	CTYRAG	2 cut(s)	85, 754
SmoI	CTYRAG	2 cut(s)	85, 754
Sse9I	AATT	4 cut(s)	541, 713, 927, 1431
SseBI	AGGCCT	1 cut(s)	1219
SsiI	CCGC	9 cut(s)	116, 126, 445, 488, 722, 1069, 1071, 1254, 1605
SspI	AATATT	2 cut(s)	54, 1294
SspMI	CTAG	4 cut(s)	132, 335, 932, 1514
StuI	AGGCCT	1 cut(s)	1219
StyD4I	CCNGG	3 cut(s)	557, 1201, 1438
StyI	CCWWGG	3 cut(s)	282, 1214, 1513
TaaI	ACNGT	1 cut(s)	362
TaiI	ACGT	4 cut(s)	309, 609, 819, 1312
TaqI	TCGA	6 cut(s)	450, 507, 539, 1345, 1508, 1609
TasI	AATT	4 cut(s)	541, 713, 927, 1431
TatI	WGTACW	1 cut(s)	12
TauI	GCSGC	4 cut(s)	129, 491, 725, 1257
TfiI	GAWTC	8 cut(s)	473, 501, 513, 554, 745, 1045, 1136, 1303
Tru1I	TTAA	4 cut(s)	293, 659, 780, 1457
Tru9I	TTAA	4 cut(s)	293, 659, 780, 1457
TscAI	CASTG	3 cut(s)	738, 1150, 1426
TspDTI	ATGAA	7 cut(s)	248, 260, 437, 806, 878, 898, 1481
TspGWI	ACGGA	4 cut(s)	231, 389, 424, 1250
TspRI	CASTG	3 cut(s)	738, 1150, 1426
Tth111I	GACNNNGTC	2 cut(s)	308, 1244
VpaK11BI	GGWCC	2 cut(s)	218, 1205
XapI	RAATTY	2 cut(s)	541, 1431
XbaI	TCTAGA	1 cut(s)	931
XceI	RCATGY	1 cut(s)	1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	756
XmaJI	CCTAGG	1 cut(s)	1513
XmnI	GAANNNNTTC	1 cut(s)	1584
XspI	CTAG	4 cut(s)	132, 335, 932, 1514
ZraI	GACGTC	1 cut(s)	307
ZrmI	AGTACT	1 cut(s)	14

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.