RLG00000035276

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
64016466 .. 64018545
2080 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035276

Sequence Viewer

Length: 375 bp
ATGTGGCCGGATGACCCGTTAGGGTTTAAGCCGGAGAGATTTCTAACCACCCATAAGGATGTTGATGTTAAGGGTCAACACTTTGAGTTCATTCCATTTGGAAGTGGAAGAAGAGCATGCCCTGGACTGGCTTTCAACATTCAAATGGTGCAATTTACATTGGCCAGCTTCCTACATGCGTTCCAAGTTTCAACTCTTCCCGATAATGAACCAATTGATATGAGTGAGAGTCTTGGGCTCACTAACGTTAAGGCTACTCCACTTGAAGTTCCATCAAACCTCTTGATAGGTGGAGATCGTGGAGGGTGGGGGGCCGCGACCGAGATTGTCCGTCCAGGATGGCGGTGGGATGGAGGTGCGACTGGATCGAGTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

13.52

Weight (kDa)

5.2

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 81 7.8e-18 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 317
AciI CCGC 2 cut(s) 315, 343
AclI AACGTT 1 cut(s) 246
AclWI GGATC 1 cut(s) 373
AcoI YGGCCR 2 cut(s) 5, 162
AfiI CCNNNNNNNGG 1 cut(s) 127
AgsI TTSAA 4 cut(s) 136, 143, 192, 266
AjnI CCWGG 2 cut(s) 121, 334
AluBI AGCT 1 cut(s) 168
AluI AGCT 1 cut(s) 168
AlwI GGATC 1 cut(s) 373
AoxI GGCC 3 cut(s) 5, 162, 312
AspS9I GGNCC 1 cut(s) 312
BalI TGGCCA 1 cut(s) 164
BanII GRGCYC 1 cut(s) 240
BccI CCATC 3 cut(s) 280, 333, 344
BciT130I CCWGG 2 cut(s) 123, 336
BisI GCNGC 1 cut(s) 315
BlsI GCNGC 1 cut(s) 316
Bme1390I CCNGG 2 cut(s) 123, 336
BmgT120I GGNCC 1 cut(s) 312
BmiI GGNNCC 1 cut(s) 313
BmrFI CCNGG 2 cut(s) 123, 336
BsaJI CCNNGG 1 cut(s) 121
Bsc4I CCNNNNNNNGG 1 cut(s) 127
Bse1I ACTGG 2 cut(s) 132, 367
BseBI CCWGG 2 cut(s) 123, 336
BseDI CCNNGG 1 cut(s) 121
BseGI GGATG 4 cut(s) 16, 64, 344, 355
BseLI CCNNNNNNNGG 1 cut(s) 127
BseNI ACTGG 2 cut(s) 132, 367
Bsh1236I CGCG 1 cut(s) 317
Bsh1285I CGRYCG 1 cut(s) 321
BshFI GGCC 3 cut(s) 7, 164, 314
BsiEI CGRYCG 1 cut(s) 321
BsiSI CCGG 2 cut(s) 8, 32
BslI CCNNNNNNNGG 1 cut(s) 127
BsnI GGCC 3 cut(s) 7, 164, 314
Bsp1286I GDGCHC 1 cut(s) 240
Bsp143I GATC 2 cut(s) 295, 365
BspACI CCGC 2 cut(s) 315, 343
BspANI GGCC 3 cut(s) 7, 164, 314
BspFNI CGCG 1 cut(s) 317
BspLI GGNNCC 1 cut(s) 313
BspPI GGATC 1 cut(s) 373
BspQI GCTCTTC 1 cut(s) 106
BsrI ACTGG 2 cut(s) 132, 367
BssECI CCNNGG 1 cut(s) 121
BssMI GATC 2 cut(s) 295, 365
Bst2UI CCWGG 2 cut(s) 123, 336
Bst6I CTCTTC 2 cut(s) 106, 201
BstC8I GCNNGC 2 cut(s) 118, 166
BstF5I GGATG 4 cut(s) 16, 64, 344, 355
BstFNI CGCG 1 cut(s) 317
BstKTI GATC 2 cut(s) 298, 368
BstMBI GATC 2 cut(s) 295, 365
BstMCI CGRYCG 1 cut(s) 321
BstNI CCWGG 2 cut(s) 123, 336
BstNSI RCATGY 2 cut(s) 120, 179
BstSCI CCNGG 2 cut(s) 121, 334
BstUI CGCG 1 cut(s) 317
BsuRI GGCC 3 cut(s) 7, 164, 314
BtsCI GGATG 4 cut(s) 16, 64, 344, 355
Cac8I GCNNGC 2 cut(s) 118, 166
Cfr13I GGNCC 1 cut(s) 312
CviAII CATG 2 cut(s) 117, 176
CviJI RGCY 8 cut(s) 7, 31, 131, 164, 168, 238, 254, 314
CviKI_1 RGCY 8 cut(s) 7, 31, 131, 164, 168, 238, 254, 314
DpnI GATC 2 cut(s) 297, 367
DpnII GATC 2 cut(s) 295, 365
EaeI YGGCCR 2 cut(s) 5, 162
Eam1104I CTCTTC 2 cut(s) 106, 201
EarI CTCTTC 2 cut(s) 106, 201
Eco24I GRGCYC 1 cut(s) 240
EcoRII CCWGG 2 cut(s) 121, 334
EcoT38I GRGCYC 1 cut(s) 240
FaeI CATG 2 cut(s) 120, 179
FaiI YATR 4 cut(s) 54, 118, 177, 221
FatI CATG 2 cut(s) 116, 175
Fnu4HI GCNGC 1 cut(s) 315
FokI GGATG 4 cut(s) 23, 71, 351, 362
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 1 cut(s) 315
GluI GCNGC 1 cut(s) 315
HaeIII GGCC 3 cut(s) 7, 164, 314
HapII CCGG 2 cut(s) 8, 32
Hin1II CATG 2 cut(s) 120, 179
HincII GTYRAC 1 cut(s) 77
HindII GTYRAC 1 cut(s) 77
HinfI GANTC 1 cut(s) 229
HpaII CCGG 2 cut(s) 8, 32
Hpy166II GTNNAC 1 cut(s) 77
Hpy188III TCNNGA 2 cut(s) 200, 283
Hpy8I GTNNAC 1 cut(s) 77
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 1 cut(s) 151
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 2 cut(s) 120, 179
Kzo9I GATC 2 cut(s) 295, 365
LguI GCTCTTC 1 cut(s) 106
LpnPI CCDG 9 cut(s) 21, 45, 108, 113, 135, 178, 321, 348, 348
MaeII ACGT 1 cut(s) 246
MalI GATC 2 cut(s) 297, 367
MboI GATC 2 cut(s) 295, 365
MboII GAAGA 3 cut(s) 120, 123, 188
MfeI CAATTG 1 cut(s) 213
MhlI GDGCHC 1 cut(s) 240
MlsI TGGCCA 1 cut(s) 164
MluCI AATT 2 cut(s) 152, 213
MluNI TGGCCA 1 cut(s) 164
MlyI GAGTC 1 cut(s) 238
MnlI CCTC 3 cut(s) 290, 296, 347
Mox20I TGGCCA 1 cut(s) 164
MscI TGGCCA 1 cut(s) 164
MseI TTAA 3 cut(s) 27, 69, 249
MslI CAYNNNNRTG 2 cut(s) 57, 143
Msp20I TGGCCA 1 cut(s) 164
MspI CCGG 2 cut(s) 8, 32
MspR9I CCNGG 2 cut(s) 123, 336
MunI CAATTG 1 cut(s) 213
MvaI CCWGG 2 cut(s) 123, 336
MvnI CGCG 1 cut(s) 317
NdeII GATC 2 cut(s) 295, 365
NlaIII CATG 2 cut(s) 120, 179
NlaIV GGNNCC 1 cut(s) 313
NspI RCATGY 2 cut(s) 120, 179
PaeI GCATGC 1 cut(s) 120
PciSI GCTCTTC 1 cut(s) 106
PfoI TCCNGGA 1 cut(s) 334
PkrI GCNGC 1 cut(s) 316
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
Psp1406I AACGTT 1 cut(s) 246
Psp6I CCWGG 2 cut(s) 121, 334
PspGI CCWGG 2 cut(s) 121, 334
PspN4I GGNNCC 1 cut(s) 313
PspPI GGNCC 1 cut(s) 312
RseI CAYNNNNRTG 2 cut(s) 57, 143
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 3 cut(s) 27, 69, 249
SatI GCNGC 1 cut(s) 315
Sau3AI GATC 2 cut(s) 295, 365
Sau96I GGNCC 1 cut(s) 312
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 2 cut(s) 123, 336
SduI GDGCHC 1 cut(s) 240
SetI ASST 5 cut(s) 170, 249, 282, 292, 358
SmiMI CAYNNNNRTG 2 cut(s) 57, 143
SphI GCATGC 1 cut(s) 120
Sse9I AATT 2 cut(s) 152, 213
SsiI CCGC 2 cut(s) 315, 343
StyD4I CCNGG 2 cut(s) 121, 334
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 368
TaqII GACCGA 1 cut(s) 335
TasI AATT 2 cut(s) 152, 213
TauI GCSGC 1 cut(s) 317
Tru1I TTAA 3 cut(s) 27, 69, 249
Tru9I TTAA 3 cut(s) 27, 69, 249
TspDTI ATGAA 2 cut(s) 79, 222
TspGWI ACGGA 1 cut(s) 320
XceI RCATGY 2 cut(s) 120, 179
XcmI CCANNNNNNNNNTGG 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.