RLG00000035258

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
63790603 .. 63791361
759 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035258

Sequence Viewer

Length: 759 bp
ATGGATTTTCTCATTCCCTATCTCGCAAGCCCCACCACGGTTGGATTGCTTGCAATAATAACCATTTCCTATTGTTTAATCTCAAGGAGTTGGAGAGCTTCCAAGGGCAAAACAGCTCCTGAAGCCAAGGGTGCATGGCCTCTATTTGGTCACCTTCCCTTGTTAGGACGGTCGGGCAAGCCTCTTCACATGATCTTGGGAGCCATGGCTAACAAGTACGGACCCCTTTTCACCGTCCGGCTTGGGGTGCATCAATCATTGGTGGTGAGTAGTAGTGAGATGGCTAAGGAGTGCTTTACGATCAACGACGCGTGCTTGTCCTCCCGCCCGAAAATGGCAGTTGCAGAGCACATCGGCTATAACTACGCAATGTTTGGGCTCGCACCCTACGGGCCATACTGGCGTGAAATGCGTAAGATTACCACTTTAGAGTTGCTCTCCAACCGCCGACTCGAGCTGCTAAAAAACATTCGAGTCTCGGAGGTGACCACCTTTTTGAAAGAAATGTACAAAACTTGGAGCAGTAGAGCAAATGTAAACAAGGGCTCCGACGGTGACCAAGTGTTGGTGGAGTTAAAACAATGGTTCGGGGACCTCACTTTAAATGTGATTCTCAGGATGGTGGCTGGAAAGCGTTACTCTGTTGCTATCGACGAAGAAGAGAAGAACGAAGCACGTCAAGTTCAGAAGGCAGTGAAGGAGTTCTTTGACCTTACTGGGTTATTTTTGGTGGGCGATGTGATTCCTTATCTTCAGTGA

Protein Analysis

253

Amino Acids

28.31

Weight (kDa)

9.35

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 242 7.3e-21 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 565
AccII CGCG 1 cut(s) 311
AciI CCGC 2 cut(s) 325, 445
AcuI CTGAAG 2 cut(s) 141, 737
AfaI GTAC 2 cut(s) 218, 509
AfiI CCNNNNNNNGG 6 cut(s) 37, 146, 164, 244, 334, 565
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 1 cut(s) 499
AjiI CACGTC 1 cut(s) 677
AluBI AGCT 3 cut(s) 98, 116, 457
AluI AGCT 3 cut(s) 98, 116, 457
Alw21I GWGCWC 1 cut(s) 351
Alw26I GTCTC 1 cut(s) 481
AlwNI CAGNNNCTG 1 cut(s) 119
Ama87I CYCGRG 1 cut(s) 452
AoxI GGCC 2 cut(s) 137, 392
ApeKI GCWGC 1 cut(s) 457
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
Asp700I GAANNNNTTC 1 cut(s) 701
AspS9I GGNCC 3 cut(s) 221, 392, 592
AsuHPI GGTGA 5 cut(s) 143, 223, 277, 496, 566
AvaI CYCGRG 1 cut(s) 452
AvaII GGWCC 2 cut(s) 221, 592
BanII GRGCYC 2 cut(s) 381, 548
Bbv12I GWGCWC 1 cut(s) 351
BbvI GCAGC 1 cut(s) 444
BccI CCATC 2 cut(s) 274, 613
BcoDI GTCTC 1 cut(s) 481
BglI GCCNNNNNGGC 1 cut(s) 400
BisI GCNGC 1 cut(s) 458
BlsI GCNGC 1 cut(s) 459
Bme18I GGWCC 2 cut(s) 221, 592
BmeT110I CYCGRG 1 cut(s) 452
BmgBI CACGTC 1 cut(s) 677
BmgT120I GGNCC 3 cut(s) 221, 392, 592
BmiI GGNNCC 4 cut(s) 202, 223, 547, 593
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 1 cut(s) 259
BmuI ACTGGG 1 cut(s) 726
BplI GAGNNNNNCTC 2 cut(s) 422, 454
Bpu10I CCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 67
BsaJI CCNNGG 4 cut(s) 36, 102, 126, 204
BsaXI ACNNNNNCTCC 2 cut(s) 530, 560
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 146, 164, 244, 334, 565
Bse1I ACTGG 2 cut(s) 404, 721
Bse3DI GCAATG 1 cut(s) 375
BseDI CCNNGG 4 cut(s) 36, 102, 126, 204
BseGI GGATG 1 cut(s) 624
BseLI CCNNNNNNNGG 6 cut(s) 37, 146, 164, 244, 334, 565
BseMI GCAATG 1 cut(s) 375
BseMII CTCAG 1 cut(s) 628
BseNI ACTGG 2 cut(s) 404, 721
BseXI GCAGC 1 cut(s) 444
Bsh1236I CGCG 1 cut(s) 311
Bsh1285I CGRYCG 1 cut(s) 173
BshFI GGCC 2 cut(s) 139, 394
BsiEI CGRYCG 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 351
BsiHKCI CYCGRG 1 cut(s) 452
BsiSI CCGG 1 cut(s) 238
BslFI GGGAC 1 cut(s) 605
BslI CCNNNNNNNGG 6 cut(s) 37, 146, 164, 244, 334, 565
BsmAI GTCTC 1 cut(s) 481
BsmFI GGGAC 1 cut(s) 605
BsnI GGCC 2 cut(s) 139, 394
BsoBI CYCGRG 1 cut(s) 452
Bsp1286I GDGCHC 3 cut(s) 351, 381, 548
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 2 cut(s) 192, 300
Bsp19I CCATGG 1 cut(s) 204
BspACI CCGC 2 cut(s) 325, 445
BspANI GGCC 2 cut(s) 139, 394
BspCNI CTCAG 1 cut(s) 627
BspFNI CGCG 1 cut(s) 311
BspLI GGNNCC 4 cut(s) 202, 223, 547, 593
BsrDI GCAATG 1 cut(s) 375
BsrGI TGTACA 1 cut(s) 507
BsrI ACTGG 2 cut(s) 404, 721
BssECI CCNNGG 4 cut(s) 36, 102, 126, 204
BssMI GATC 2 cut(s) 192, 300
BssT1I CCWWGG 3 cut(s) 102, 126, 204
Bst4CI ACNGT 4 cut(s) 40, 171, 235, 554
Bst6I CTCTTC 2 cut(s) 189, 654
BstAUI TGTACA 1 cut(s) 507
BstC8I GCNNGC 5 cut(s) 28, 51, 179, 313, 381
BstDEI CTNAG 2 cut(s) 285, 614
BstDSI CCRYGG 2 cut(s) 36, 204
BstEII GGTNACC 3 cut(s) 149, 484, 554
BstF5I GGATG 1 cut(s) 624
BstFNI CGCG 1 cut(s) 311
BstKTI GATC 2 cut(s) 195, 303
BstMAI GTCTC 1 cut(s) 481
BstMBI GATC 2 cut(s) 192, 300
BstMCI CGRYCG 1 cut(s) 173
BstMWI GCNNNNNNNGC 5 cut(s) 122, 131, 247, 400, 409
BstPI GGTNACC 3 cut(s) 149, 484, 554
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 1 cut(s) 444
BsuRI GGCC 2 cut(s) 139, 394
BtgI CCRYGG 2 cut(s) 36, 204
BtgZI GCGATG 1 cut(s) 750
BtrI CACGTC 1 cut(s) 677
BtsCI GGATG 1 cut(s) 624
BtsI GCAGTG 1 cut(s) 699
BtsIMutI CAGTG 1 cut(s) 699
Cac8I GCNNGC 5 cut(s) 28, 51, 179, 313, 381
CaiI CAGNNNCTG 1 cut(s) 119
Cfr13I GGNCC 3 cut(s) 221, 392, 592
CseI GACGC 1 cut(s) 317
Csp6I GTAC 2 cut(s) 217, 508
CspCI CAANNNNNGTGG 2 cut(s) 22, 57
CviAII CATG 3 cut(s) 135, 190, 205
CviQI GTAC 2 cut(s) 217, 508
DdeI CTNAG 2 cut(s) 285, 614
DpnI GATC 2 cut(s) 194, 302
DpnII GATC 2 cut(s) 192, 300
DraI TTTAAA 1 cut(s) 603
Eam1104I CTCTTC 2 cut(s) 189, 654
EarI CTCTTC 2 cut(s) 189, 654
Eco130I CCWWGG 3 cut(s) 102, 126, 204
Eco24I GRGCYC 2 cut(s) 381, 548
Eco47I GGWCC 2 cut(s) 221, 592
Eco57I CTGAAG 2 cut(s) 141, 737
Eco88I CYCGRG 1 cut(s) 452
Eco91I GGTNACC 3 cut(s) 149, 484, 554
EcoO109I RGGNCCY 1 cut(s) 592
EcoO65I GGTNACC 3 cut(s) 149, 484, 554
EcoT14I CCWWGG 3 cut(s) 102, 126, 204
EcoT38I GRGCYC 2 cut(s) 381, 548
ErhI CCWWGG 3 cut(s) 102, 126, 204
FaeI CATG 3 cut(s) 138, 193, 208
FaiI YATR 5 cut(s) 136, 191, 206, 360, 397
FalI AAGNNNNNCTT 4 cut(s) 278, 310, 689, 721
FaqI GGGAC 1 cut(s) 605
FatI CATG 3 cut(s) 134, 189, 204
FauI CCCGC 1 cut(s) 332
Fnu4HI GCNGC 1 cut(s) 458
FokI GGATG 1 cut(s) 631
FriOI GRGCYC 2 cut(s) 381, 548
Fsp4HI GCNGC 1 cut(s) 458
GluI GCNGC 1 cut(s) 458
HaeIII GGCC 2 cut(s) 139, 394
HapII CCGG 1 cut(s) 238
HgaI GACGC 1 cut(s) 317
Hin1II CATG 3 cut(s) 138, 193, 208
HinfI GANTC 4 cut(s) 450, 474, 610, 742
HpaII CCGG 1 cut(s) 238
HphI GGTGA 5 cut(s) 143, 223, 277, 496, 566
Hpy166II GTNNAC 1 cut(s) 538
Hpy188I TCNGA 3 cut(s) 481, 550, 687
Hpy188III TCNNGA 2 cut(s) 119, 616
Hpy8I GTNNAC 1 cut(s) 538
Hpy99I CGWCG 3 cut(s) 311, 554, 656
HpyAV CCTTC 3 cut(s) 164, 682, 691
HpyCH4III ACNGT 4 cut(s) 40, 171, 235, 554
HpyCH4IV ACGT 1 cut(s) 676
HpyCH4V TGCA 4 cut(s) 53, 134, 250, 344
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 131, 247, 400, 409
HpyF3I CTNAG 2 cut(s) 285, 614
HpySE526I ACGT 1 cut(s) 676
Hsp92II CATG 3 cut(s) 138, 193, 208
Kzo9I GATC 2 cut(s) 192, 300
LmnI GCTCC 4 cut(s) 121, 200, 519, 551
LpnPI CCDG 6 cut(s) 132, 251, 385, 601, 612, 702
Lsp1109I GCAGC 1 cut(s) 444
LweI GCATC 1 cut(s) 259
MaeII ACGT 1 cut(s) 676
MaeIII GTNAC 4 cut(s) 149, 484, 554, 635
MalI GATC 2 cut(s) 194, 302
MboI GATC 2 cut(s) 192, 300
MboII GAAGA 5 cut(s) 176, 668, 671, 676, 743
MhlI GDGCHC 3 cut(s) 351, 381, 548
MluI ACGCGT 1 cut(s) 309
MlyI GAGTC 2 cut(s) 444, 483
MmeI TCCRAC 4 cut(s) 22, 71, 465, 573
MnlI CCTC 5 cut(s) 150, 192, 331, 475, 605
MroXI GAANNNNTTC 1 cut(s) 701
MseI TTAA 3 cut(s) 77, 575, 602
MspI CCGG 1 cut(s) 238
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 5 cut(s) 122, 131, 247, 400, 409
NcoI CCATGG 1 cut(s) 204
NdeII GATC 2 cut(s) 192, 300
NlaIII CATG 3 cut(s) 138, 193, 208
NlaIV GGNNCC 4 cut(s) 202, 223, 547, 593
NmuCI GTSAC 3 cut(s) 149, 484, 554
PaeR7I CTCGAG 1 cut(s) 452
PdmI GAANNNNTTC 1 cut(s) 701
PfeI GAWTC 2 cut(s) 610, 742
PflMI CCANNNNNTGG 1 cut(s) 565
PkrI GCNGC 1 cut(s) 459
PleI GAGTC 2 cut(s) 444, 482
PpsI GAGTC 2 cut(s) 444, 482
PpuMI RGGWCCY 1 cut(s) 592
Psp5II RGGWCCY 1 cut(s) 592
PspEI GGTNACC 3 cut(s) 149, 484, 554
PspN4I GGNNCC 4 cut(s) 202, 223, 547, 593
PspPI GGNCC 3 cut(s) 221, 392, 592
PspPPI RGGWCCY 1 cut(s) 592
PspXI VCTCGAGB 1 cut(s) 452
PstNI CAGNNNCTG 1 cut(s) 119
RsaI GTAC 2 cut(s) 218, 509
RsaNI GTAC 2 cut(s) 217, 508
SaqAI TTAA 3 cut(s) 77, 575, 602
SatI GCNGC 1 cut(s) 458
Sau3AI GATC 2 cut(s) 192, 300
Sau96I GGNCC 3 cut(s) 221, 392, 592
SchI GAGTC 2 cut(s) 444, 483
SduI GDGCHC 3 cut(s) 351, 381, 548
SetI ASST 9 cut(s) 100, 118, 156, 459, 486, 494, 597, 679, 714
SfaNI GCATC 1 cut(s) 259
Sfr274I CTCGAG 1 cut(s) 452
SinI GGWCC 2 cut(s) 221, 592
SlaI CTCGAG 1 cut(s) 452
SmlI CTYRAG 2 cut(s) 82, 452
SmoI CTYRAG 2 cut(s) 82, 452
SsiI CCGC 2 cut(s) 325, 445
StyI CCWWGG 3 cut(s) 102, 126, 204
TaaI ACNGT 4 cut(s) 40, 171, 235, 554
TaiI ACGT 1 cut(s) 679
TaqI TCGA 3 cut(s) 453, 472, 651
TatI WGTACW 1 cut(s) 507
TfiI GAWTC 2 cut(s) 610, 742
Tru1I TTAA 3 cut(s) 77, 575, 602
Tru9I TTAA 3 cut(s) 77, 575, 602
TscAI CASTG 1 cut(s) 699
TseFI GTSAC 3 cut(s) 149, 484, 554
TseI GCWGC 1 cut(s) 457
Tsp45I GTSAC 3 cut(s) 149, 484, 554
TspGWI ACGGA 1 cut(s) 234
TspRI CASTG 1 cut(s) 699
Van91I CCANNNNNTGG 1 cut(s) 565
VpaK11BI GGWCC 2 cut(s) 221, 592
XhoI CTCGAG 1 cut(s) 452
XmnI GAANNNNTTC 1 cut(s) 701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.