Rmu_ssc0000371.1_g000012

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000371.1
Physical Location & Seq
Reverse (-)
62458 .. 63345
888 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000371.1_g000012.1.cds

Sequence Viewer

Length: 888 bp
atggctgacaagtacggaccgctcttcactatcaagcttggtgtgcaccgagctcttgttgtaagcagttgggatgtggctaaagaatgtctcaccacaaatgataaagcttttgccaaccgcccgaaagctttatactcagagattatggggtacgactatgccgtgttcggtcgtagcccttacggaccttactggcgccagatgcgaaagataaccacgctgcacatcctctccaaccacaagttggagttgctcaaccacgtccgagaatcggaggtgaaggtgtcaaccaaacatatatttgatatgcgggagcgaaacaaaggtgtctcagataaggtgctggtggacatgaagaggtggtttggagacttaactttaaatgtcatgttcaggatggttgttggaaagcgattttctggggctaactcggcgcaagagaatgaagagaatgaatgctttcggaaggcgttgagggaatttttaagattgggtggcgaatttgtaatctcagatgcagtcccatttcttaggtggttggattggggaggttatgcgaaagccatgaagaagacagctaaagaactcgatggtgcgcttaaaaaatggttagaagagcataagcacaagagaagtactaattctttgcaacatgattgtgagcgtgatttcatggatatgatgcttaccgtccttgatgatgatagcagagaagagtttgctggttcaataattactgctgattcaattatcaaagctacatgcctggtatatataccgatgaacctttctcttcaacttgattatatcatgaatttcaacttcgaattcctaaacattatctcctataacacacacacacacactactaaaaagatccattag

Protein Analysis

295

Amino Acids

34.29

Weight (kDa)

8.86

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 198
AccB7I CCANNNNNTGG 1 cut(s) 247
AccBSI CCGCTC 1 cut(s) 22
AciI CCGC 3 cut(s) 20, 121, 313
AclWI GGATC 1 cut(s) 874
AcsI RAATTY 4 cut(s) 482, 503, 817, 830
AcyI GRCGYC 1 cut(s) 199
AfaI GTAC 3 cut(s) 14, 155, 640
AfiI CCNNNNNNNGG 2 cut(s) 247, 274
AgsI TTSAA 4 cut(s) 732, 750, 800, 823
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 1 cut(s) 768
AluBI AGCT 6 cut(s) 37, 53, 110, 131, 581, 761
AluI AGCT 6 cut(s) 37, 53, 110, 131, 581, 761
Alw21I GWGCWC 2 cut(s) 48, 55
Alw26I GTCTC 3 cut(s) 95, 337, 366
Alw44I GTGCAC 1 cut(s) 44
AlwI GGATC 1 cut(s) 874
ApaLI GTGCAC 1 cut(s) 44
ApeKI GCWGC 1 cut(s) 223
ApoI RAATTY 4 cut(s) 482, 503, 817, 830
Asp700I GAANNNNTTC 1 cut(s) 462
AspLEI GCGC 3 cut(s) 201, 439, 601
AspS9I GGNCC 2 cut(s) 17, 188
AsuHPI GGTGA 2 cut(s) 85, 292
AsuII TTCGAA 1 cut(s) 828
AvaII GGWCC 2 cut(s) 17, 188
BaeGI GKGCMC 1 cut(s) 48
BanI GGYRCC 1 cut(s) 198
BanII GRGCYC 1 cut(s) 55
BbsI GAAGAC 1 cut(s) 581
Bbv12I GWGCWC 2 cut(s) 48, 55
BbvI GCAGC 1 cut(s) 210
BccI CCATC 2 cut(s) 394, 587
BceAI ACGGC 1 cut(s) 149
BciT130I CCWGG 1 cut(s) 770
BcoDI GTCTC 3 cut(s) 95, 337, 366
BfoI RGCGCY 1 cut(s) 202
BisI GCNGC 1 cut(s) 224
BlsI GCNGC 1 cut(s) 225
BmcAI AGTACT 1 cut(s) 640
Bme1390I CCNGG 1 cut(s) 770
Bme18I GGWCC 2 cut(s) 17, 188
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 2 cut(s) 17, 188
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 770
BmsI GCATC 3 cut(s) 195, 508, 675
BpiI GAAGAC 1 cut(s) 581
Bpu14I TTCGAA 1 cut(s) 828
BsaHI GRCGYC 1 cut(s) 199
BsaXI ACNNNNNCTCC 4 cut(s) 218, 248, 830, 860
Bsc4I CCNNNNNNNGG 2 cut(s) 247, 274
Bse1I ACTGG 1 cut(s) 200
BseBI CCWGG 1 cut(s) 770
BseGI GGATG 3 cut(s) 79, 228, 405
BseLI CCNNNNNNNGG 2 cut(s) 247, 274
BseMII CTCAG 3 cut(s) 153, 348, 528
BseNI ACTGG 1 cut(s) 200
BseSI GKGCMC 1 cut(s) 48
BseXI GCAGC 1 cut(s) 210
BsgI GTGCAG 1 cut(s) 209
Bsh1285I CGRYCG 1 cut(s) 175
BshNI GGYRCC 1 cut(s) 198
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 2 cut(s) 48, 55
BslFI GGGAC 1 cut(s) 509
BslI CCNNNNNNNGG 2 cut(s) 247, 274
BsmAI GTCTC 3 cut(s) 95, 337, 366
BsmFI GGGAC 1 cut(s) 509
BsmI GAATGC 1 cut(s) 464
Bsp119I TTCGAA 1 cut(s) 828
Bsp1286I GDGCHC 2 cut(s) 48, 55
Bsp143I GATC 1 cut(s) 879
BspACI CCGC 3 cut(s) 20, 121, 313
BspCNI CTCAG 3 cut(s) 152, 347, 527
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 1 cut(s) 200
BspPI GGATC 1 cut(s) 874
BspQI GCTCTTC 2 cut(s) 29, 612
BspT104I TTCGAA 1 cut(s) 828
BspT107I GGYRCC 1 cut(s) 198
BsrBI CCGCTC 1 cut(s) 22
BsrI ACTGG 1 cut(s) 200
BssMI GATC 1 cut(s) 879
BssNI GRCGYC 1 cut(s) 199
Bst2UI CCWGG 1 cut(s) 770
Bst4CI ACNGT 1 cut(s) 694
Bst6I CTCTTC 6 cut(s) 29, 353, 444, 612, 711, 801
BstACI GRCGYC 1 cut(s) 199
BstBI TTCGAA 1 cut(s) 828
BstDEI CTNAG 4 cut(s) 139, 334, 514, 533
BstF5I GGATG 3 cut(s) 79, 228, 405
BstH2I RGCGCY 1 cut(s) 202
BstHHI GCGC 3 cut(s) 201, 439, 601
BstKTI GATC 1 cut(s) 882
BstMAI GTCTC 3 cut(s) 95, 337, 366
BstMBI GATC 1 cut(s) 879
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 3 cut(s) 43, 205, 434
BstNI CCWGG 1 cut(s) 770
BstNSI RCATGY 1 cut(s) 768
BstSCI CCNGG 1 cut(s) 768
BstSLI GKGCMC 1 cut(s) 48
BstV1I GCAGC 1 cut(s) 210
BstV2I GAAGAC 1 cut(s) 581
BstX2I RGATCY 1 cut(s) 879
BstYI RGATCY 1 cut(s) 879
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 3 cut(s) 79, 228, 405
CciI TCATGA 1 cut(s) 813
CfoI GCGC 3 cut(s) 201, 439, 601
Cfr13I GGNCC 2 cut(s) 17, 188
CpoI CGGWCCG 1 cut(s) 17
Csp6I GTAC 3 cut(s) 13, 154, 639
CspI CGGWCCG 1 cut(s) 17
CviAII CATG 7 cut(s) 355, 391, 568, 656, 676, 765, 814
CviQI GTAC 3 cut(s) 13, 154, 639
DdeI CTNAG 4 cut(s) 139, 334, 514, 533
DinI GGCGCC 1 cut(s) 200
DpnI GATC 1 cut(s) 881
DpnII GATC 1 cut(s) 879
DraI TTTAAA 1 cut(s) 384
Eam1104I CTCTTC 6 cut(s) 29, 353, 444, 612, 711, 801
EarI CTCTTC 6 cut(s) 29, 353, 444, 612, 711, 801
Ecl136II GAGCTC 1 cut(s) 53
Eco24I GRGCYC 1 cut(s) 55
Eco47I GGWCC 2 cut(s) 17, 188
Eco53kI GAGCTC 1 cut(s) 53
EcoICRI GAGCTC 1 cut(s) 53
EcoRI GAATTC 1 cut(s) 830
EcoRII CCWGG 1 cut(s) 768
EcoT38I GRGCYC 1 cut(s) 55
EgeI GGCGCC 1 cut(s) 200
EheI GGCGCC 1 cut(s) 200
FaeI CATG 7 cut(s) 358, 394, 571, 659, 679, 768, 817
FaqI GGGAC 1 cut(s) 509
FatI CATG 7 cut(s) 354, 390, 567, 655, 675, 764, 813
FauI CCCGC 1 cut(s) 306
Fnu4HI GCNGC 1 cut(s) 224
FokI GGATG 3 cut(s) 86, 215, 412
FriOI GRGCYC 1 cut(s) 55
Fsp4HI GCNGC 1 cut(s) 224
GlaI GCGC 3 cut(s) 200, 438, 600
GluI GCNGC 1 cut(s) 224
HaeII RGCGCY 1 cut(s) 202
HhaI GCGC 3 cut(s) 201, 439, 601
Hin1I GRCGYC 1 cut(s) 199
Hin1II CATG 7 cut(s) 358, 394, 571, 659, 679, 768, 817
Hin6I GCGC 3 cut(s) 199, 437, 599
HinP1I GCGC 3 cut(s) 199, 437, 599
HincII GTYRAC 1 cut(s) 291
HindII GTYRAC 1 cut(s) 291
HindIII AAGCTT 3 cut(s) 35, 108, 129
HinfI GANTC 2 cut(s) 272, 746
HphI GGTGA 2 cut(s) 85, 292
Hpy166II GTNNAC 3 cut(s) 46, 291, 352
Hpy188I TCNGA 6 cut(s) 142, 269, 277, 337, 468, 517
Hpy188III TCNNGA 2 cut(s) 397, 814
Hpy8I GTNNAC 3 cut(s) 46, 291, 352
HpyAV CCTTC 2 cut(s) 277, 463
HpyCH4III ACNGT 1 cut(s) 694
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 4 cut(s) 46, 226, 521, 652
HpyF10VI GCNNNNNNNGC 3 cut(s) 43, 205, 434
HpyF3I CTNAG 4 cut(s) 139, 334, 514, 533
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 199
Hsp92II CATG 7 cut(s) 358, 394, 571, 659, 679, 768, 817
HspAI GCGC 3 cut(s) 199, 437, 599
KasI GGCGCC 1 cut(s) 198
Kzo9I GATC 1 cut(s) 879
LguI GCTCTTC 2 cut(s) 29, 612
LmnI GCTCC 1 cut(s) 316
LpnPI CCDG 8 cut(s) 181, 215, 332, 382, 408, 711, 755, 782
Lsp1109I GCAGC 1 cut(s) 210
LweI GCATC 3 cut(s) 195, 508, 675
MaeII ACGT 1 cut(s) 264
MalI GATC 1 cut(s) 881
MbiI CCGCTC 1 cut(s) 22
MboI GATC 1 cut(s) 879
MboII GAAGA 8 cut(s) 16, 370, 461, 583, 586, 629, 728, 788
MflI RGATCY 1 cut(s) 879
MhlI GDGCHC 2 cut(s) 48, 55
MluCI AATT 7 cut(s) 482, 503, 643, 735, 750, 817, 830
Mly113I GGCGCC 1 cut(s) 199
MmeI TCCRAC 4 cut(s) 228, 261, 388, 522
MnlI CCTC 5 cut(s) 242, 271, 354, 471, 545
MroXI GAANNNNTTC 1 cut(s) 462
MseI TTAA 4 cut(s) 377, 383, 488, 603
MslI CAYNNNNRTG 2 cut(s) 660, 680
MspR9I CCNGG 1 cut(s) 770
Mva1269I GAATGC 1 cut(s) 464
MvaI CCWGG 1 cut(s) 770
MwoI GCNNNNNNNGC 3 cut(s) 43, 205, 434
NarI GGCGCC 1 cut(s) 199
NdeII GATC 1 cut(s) 879
NlaIII CATG 7 cut(s) 358, 394, 571, 659, 679, 768, 817
NlaIV GGNNCC 1 cut(s) 200
NmeAIII GCCGAG 1 cut(s) 413
NspI RCATGY 1 cut(s) 768
NspV TTCGAA 1 cut(s) 828
PagI TCATGA 1 cut(s) 813
PciSI GCTCTTC 2 cut(s) 29, 612
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PctI GAATGC 1 cut(s) 464
PdmI GAANNNNTTC 1 cut(s) 462
PfeI GAWTC 2 cut(s) 272, 746
PflMI CCANNNNNTGG 1 cut(s) 247
PkrI GCNGC 1 cut(s) 225
PluTI GGCGCC 1 cut(s) 202
Psp124BI GAGCTC 1 cut(s) 55
Psp6I CCWGG 1 cut(s) 768
PspGI CCWGG 1 cut(s) 768
PspN4I GGNNCC 1 cut(s) 200
PspPI GGNCC 2 cut(s) 17, 188
PsuI RGATCY 1 cut(s) 879
RsaI GTAC 3 cut(s) 14, 155, 640
RsaNI GTAC 3 cut(s) 13, 154, 639
RseI CAYNNNNRTG 2 cut(s) 660, 680
Rsr2I CGGWCCG 1 cut(s) 17
RsrII CGGWCCG 1 cut(s) 17
SacI GAGCTC 1 cut(s) 55
SapI GCTCTTC 2 cut(s) 29, 612
SaqAI TTAA 4 cut(s) 377, 383, 488, 603
SatI GCNGC 1 cut(s) 224
Sau3AI GATC 1 cut(s) 879
Sau96I GGNCC 2 cut(s) 17, 188
ScaI AGTACT 1 cut(s) 640
ScrFI CCNGG 1 cut(s) 770
SduI GDGCHC 2 cut(s) 48, 55
SfaNI GCATC 3 cut(s) 195, 508, 675
SfoI GGCGCC 1 cut(s) 200
SfuI TTCGAA 1 cut(s) 828
SinI GGWCC 2 cut(s) 17, 188
SmiMI CAYNNNNRTG 2 cut(s) 660, 680
Sse9I AATT 7 cut(s) 482, 503, 643, 735, 750, 817, 830
SsiI CCGC 3 cut(s) 20, 121, 313
SspDI GGCGCC 1 cut(s) 198
SstI GAGCTC 1 cut(s) 55
StyD4I CCNGG 1 cut(s) 768
TaaI ACNGT 1 cut(s) 694
TaiI ACGT 1 cut(s) 267
TaqI TCGA 2 cut(s) 591, 828
TaqII GACCGA 1 cut(s) 161
TasI AATT 7 cut(s) 482, 503, 643, 735, 750, 817, 830
TatI WGTACW 1 cut(s) 638
TfiI GAWTC 2 cut(s) 272, 746
Tru1I TTAA 4 cut(s) 377, 383, 488, 603
Tru9I TTAA 4 cut(s) 377, 383, 488, 603
TseI GCWGC 1 cut(s) 223
TspDTI ATGAA 7 cut(s) 371, 462, 471, 584, 664, 800, 830
TspGWI ACGGA 2 cut(s) 30, 201
Van91I CCANNNNNTGG 1 cut(s) 247
VneI GTGCAC 1 cut(s) 44
VpaK11BI GGWCC 2 cut(s) 17, 188
XapI RAATTY 4 cut(s) 482, 503, 817, 830
XceI RCATGY 1 cut(s) 768
XcmI CCANNNNNNNNNTGG 2 cut(s) 244, 534
XmnI GAANNNNTTC 1 cut(s) 462
ZrmI AGTACT 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.