Rmu_ssc0000371.1_g000009

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000371.1
Physical Location & Seq
Reverse (-)
48162 .. 48797
636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000371.1_g000009.1.cds

Sequence Viewer

Length: 636 bp
atgtacatttcatatgtccttttggaggcggttcttctaggagggacagatacctcaacagtgacattaacctgggctctttctttgttactcaacaatcctaaagtcctgaagaaggctcaacttgagttggacaaccatgttggtagggaaaggcaagtgaatgaatcagatgtgaagaacctagcctatctccaagccattatcaaggaaacgttgcggctataccctgctggacctctctcagtaccacatgaatccagagaaaactgcacaataggtaactatcatgtaacctcaggtacgcgtcttcttatcaacctttcaaagattcatcgcgatccaaatgtctggctcgacccatgtctattccaaccagaaaggtttcttacaactcacaagaatgttgatgttaggggccagaattttgaatttataccatttggaagtggtagacgaatatgtccaggaatctctctagcacttcaagttactcaacttacactggctcatttgcttcatgggtttgaaattacagccccatctgatgaaccagttgatatgggtgagttcaggaataacaaacatgaagacaaccccactagaggtccttctcactccacgcctgcatcctaa

Protein Analysis

211

Amino Acids

23.6

Weight (kDa)

6.5

Isoelectric Point (pI)

29.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 462
AccI GTMKAC 1 cut(s) 454
AccII CGCG 2 cut(s) 307, 339
AciI CCGC 2 cut(s) 29, 220
AclI AACGTT 1 cut(s) 215
AclWI GGATC 1 cut(s) 335
AcsI RAATTY 2 cut(s) 424, 431
AcuI CTGAAG 1 cut(s) 131
AfaI GTAC 3 cut(s) 5, 249, 304
AfiI CCNNNNNNNGG 3 cut(s) 25, 115, 605
AflIII ACRYGT 1 cut(s) 305
AgsI TTSAA 4 cut(s) 327, 431, 488, 530
AjnI CCWGG 2 cut(s) 71, 466
AlwI GGATC 1 cut(s) 335
AoxI GGCC 1 cut(s) 418
ApoI RAATTY 2 cut(s) 424, 431
Asp700I GAANNNNTTC 1 cut(s) 384
AspS9I GGNCC 3 cut(s) 236, 418, 608
AsuHPI GGTGA 1 cut(s) 578
AvaII GGWCC 2 cut(s) 236, 608
AxyI CCTNAGG 1 cut(s) 298
BanII GRGCYC 1 cut(s) 79
BbsI GAAGAC 2 cut(s) 302, 597
BccI CCATC 1 cut(s) 550
BciT130I CCWGG 2 cut(s) 73, 468
BfaI CTAG 4 cut(s) 38, 185, 479, 603
BisI GCNGC 1 cut(s) 221
BlsI GCNGC 1 cut(s) 222
Bme1390I CCNGG 2 cut(s) 73, 468
Bme18I GGWCC 2 cut(s) 236, 608
BmgT120I GGNCC 3 cut(s) 236, 418, 608
BmiI GGNNCC 1 cut(s) 419
BmrFI CCNGG 2 cut(s) 73, 468
BoxI GACNNNNGTC 1 cut(s) 363
BpiI GAAGAC 2 cut(s) 302, 597
BpuEI CTTGAG 1 cut(s) 146
BsaJI CCNNGG 1 cut(s) 72
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 115, 605
Bse1I ACTGG 2 cut(s) 510, 554
Bse21I CCTNAGG 1 cut(s) 298
BseBI CCWGG 2 cut(s) 73, 468
BseDI CCNNGG 1 cut(s) 72
BseGI GGATG 1 cut(s) 629
BseLI CCNNNNNNNGG 3 cut(s) 25, 115, 605
BseMII CTCAG 2 cut(s) 258, 312
BseNI ACTGG 2 cut(s) 510, 554
BsgI GTGCAG 1 cut(s) 256
Bsh1236I CGCG 2 cut(s) 307, 339
BshFI GGCC 1 cut(s) 420
BslFI GGGAC 1 cut(s) 58
BslI CCNNNNNNNGG 3 cut(s) 25, 115, 605
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 1 cut(s) 420
Bsp1286I GDGCHC 1 cut(s) 79
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 1 cut(s) 340
Bsp68I TCGCGA 1 cut(s) 339
BspACI CCGC 2 cut(s) 29, 220
BspANI GGCC 1 cut(s) 420
BspCNI CTCAG 2 cut(s) 257, 311
BspFNI CGCG 2 cut(s) 307, 339
BspLI GGNNCC 1 cut(s) 419
BspPI GGATC 1 cut(s) 335
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 510, 554
BssECI CCNNGG 1 cut(s) 72
BssMI GATC 1 cut(s) 340
Bst2UI CCWGG 2 cut(s) 73, 468
Bst4CI ACNGT 1 cut(s) 61
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 627
BstDEI CTNAG 2 cut(s) 244, 298
BstENI CCTNNNNNAGG 2 cut(s) 23, 113
BstF5I GGATG 1 cut(s) 629
BstFNI CGCG 2 cut(s) 307, 339
BstKTI GATC 1 cut(s) 343
BstMBI GATC 1 cut(s) 340
BstNI CCWGG 2 cut(s) 73, 468
BstPAI GACNNNNGTC 1 cut(s) 363
BstSCI CCNGG 2 cut(s) 71, 466
BstUI CGCG 2 cut(s) 307, 339
BstV2I GAAGAC 2 cut(s) 302, 597
BstXI CCANNNNNNTGG 1 cut(s) 351
Bsu36I CCTNAGG 1 cut(s) 298
BsuRI GGCC 1 cut(s) 420
BtgZI GCGATG 1 cut(s) 320
BtsCI GGATG 1 cut(s) 629
BtsIMutI CAGTG 2 cut(s) 66, 503
BtuMI TCGCGA 1 cut(s) 339
Cac8I GCNNGC 1 cut(s) 627
Cfr13I GGNCC 3 cut(s) 236, 418, 608
CseI GACGC 1 cut(s) 296
Csp6I GTAC 3 cut(s) 4, 248, 303
CviAII CATG 6 cut(s) 140, 254, 290, 363, 521, 587
CviJI RGCY 9 cut(s) 77, 119, 188, 200, 223, 355, 420, 509, 539
CviKI_1 RGCY 9 cut(s) 77, 119, 188, 200, 223, 355, 420, 509, 539
CviQI GTAC 3 cut(s) 4, 248, 303
DdeI CTNAG 2 cut(s) 244, 298
DpnI GATC 1 cut(s) 342
DpnII GATC 1 cut(s) 340
DrdI GACNNNNNNGTC 1 cut(s) 462
DseDI GACNNNNNNGTC 1 cut(s) 462
Eco24I GRGCYC 1 cut(s) 79
Eco47I GGWCC 2 cut(s) 236, 608
Eco57I CTGAAG 1 cut(s) 131
Eco81I CCTNAGG 1 cut(s) 298
EcoNI CCTNNNNNAGG 2 cut(s) 23, 113
EcoO109I RGGNCCY 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 71, 466
EcoT38I GRGCYC 1 cut(s) 79
FaeI CATG 6 cut(s) 143, 257, 293, 366, 524, 590
FaqI GGGAC 1 cut(s) 58
FatI CATG 6 cut(s) 139, 253, 289, 362, 520, 586
FauNDI CATATG 1 cut(s) 13
FblI GTMKAC 1 cut(s) 454
Fnu4HI GCNGC 1 cut(s) 221
FokI GGATG 1 cut(s) 616
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 1 cut(s) 221
FspBI CTAG 4 cut(s) 38, 185, 479, 603
GluI GCNGC 1 cut(s) 221
HaeIII GGCC 1 cut(s) 420
HgaI GACGC 1 cut(s) 296
Hin1II CATG 6 cut(s) 143, 257, 293, 366, 524, 590
HinfI GANTC 4 cut(s) 167, 257, 331, 471
HphI GGTGA 1 cut(s) 578
Hpy166II GTNNAC 1 cut(s) 455
Hpy188I TCNGA 2 cut(s) 172, 547
Hpy188III TCNNGA 4 cut(s) 109, 261, 338, 574
Hpy8I GTNNAC 1 cut(s) 455
HpyAV CCTTC 2 cut(s) 109, 621
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 215
HpyCH4V TGCA 2 cut(s) 273, 629
HpyF3I CTNAG 2 cut(s) 244, 298
HpySE526I ACGT 1 cut(s) 215
Hsp92II CATG 6 cut(s) 143, 257, 293, 366, 524, 590
Kzo9I GATC 1 cut(s) 340
MaeI CTAG 4 cut(s) 38, 185, 479, 603
MaeII ACGT 1 cut(s) 215
MaeIII GTNAC 5 cut(s) 61, 87, 281, 292, 490
MalI GATC 1 cut(s) 342
MboI GATC 1 cut(s) 340
MboII GAAGA 5 cut(s) 26, 124, 190, 302, 602
MhlI GDGCHC 1 cut(s) 79
MluCI AATT 3 cut(s) 424, 431, 531
MluI ACGCGT 1 cut(s) 305
MmeI TCCRAC 2 cut(s) 111, 397
MnlI CCTC 6 cut(s) 19, 35, 64, 249, 307, 599
MroXI GAANNNNTTC 1 cut(s) 384
MseI TTAA 1 cut(s) 68
MslI CAYNNNNRTG 1 cut(s) 402
MspR9I CCNGG 2 cut(s) 73, 468
MvaI CCWGG 2 cut(s) 73, 468
MvnI CGCG 2 cut(s) 307, 339
NdeI CATATG 1 cut(s) 13
NdeII GATC 1 cut(s) 340
NlaIII CATG 6 cut(s) 143, 257, 293, 366, 524, 590
NlaIV GGNNCC 1 cut(s) 419
NmuCI GTSAC 1 cut(s) 61
NruI TCGCGA 1 cut(s) 339
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 4 cut(s) 167, 257, 331, 471
PfoI TCCNGGA 1 cut(s) 466
PkrI GCNGC 1 cut(s) 222
PpuMI RGGWCCY 1 cut(s) 608
PshAI GACNNNNGTC 1 cut(s) 363
Psp1406I AACGTT 1 cut(s) 215
Psp5II RGGWCCY 1 cut(s) 608
Psp6I CCWGG 2 cut(s) 71, 466
PspGI CCWGG 2 cut(s) 71, 466
PspN4I GGNNCC 1 cut(s) 419
PspPI GGNCC 3 cut(s) 236, 418, 608
PspPPI RGGWCCY 1 cut(s) 608
RruI TCGCGA 1 cut(s) 339
RsaI GTAC 3 cut(s) 5, 249, 304
RsaNI GTAC 3 cut(s) 4, 248, 303
RseI CAYNNNNRTG 1 cut(s) 402
SaqAI TTAA 1 cut(s) 68
SatI GCNGC 1 cut(s) 221
Sau3AI GATC 1 cut(s) 340
Sau96I GGNCC 3 cut(s) 236, 418, 608
ScrFI CCNGG 2 cut(s) 73, 468
SduI GDGCHC 1 cut(s) 79
SinI GGWCC 2 cut(s) 236, 608
SmiMI CAYNNNNRTG 1 cut(s) 402
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 3 cut(s) 424, 431, 531
SsiI CCGC 2 cut(s) 29, 220
SspMI CTAG 4 cut(s) 38, 185, 479, 603
StyD4I CCNGG 2 cut(s) 71, 466
TaaI ACNGT 1 cut(s) 61
TaiI ACGT 1 cut(s) 218
TaqI TCGA 1 cut(s) 357
TasI AATT 3 cut(s) 424, 431, 531
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 223
TfiI GAWTC 4 cut(s) 167, 257, 331, 471
Tru1I TTAA 1 cut(s) 68
Tru9I TTAA 1 cut(s) 68
TscAI CASTG 2 cut(s) 66, 510
TseFI GTSAC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 6 cut(s) 180, 270, 323, 509, 564, 603
TspRI CASTG 2 cut(s) 66, 510
VpaK11BI GGWCC 2 cut(s) 236, 608
XagI CCTNNNNNAGG 2 cut(s) 23, 113
XapI RAATTY 2 cut(s) 424, 431
XmiI GTMKAC 1 cut(s) 454
XmnI GAANNNNTTC 1 cut(s) 384
XspI CTAG 4 cut(s) 38, 185, 479, 603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.