MD00G1175000.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
40605109 .. 40607345
2237 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1175000.v1.1.491

Sequence Viewer

Length: 894 bp
ATGGATTCTCTCCCTTATGCAAACTCCATCGCTGCTGGATTATTCACAATAATCATCGTGTCCTATTACTTATCACGAAGATGGAGAGCTGCCGAATACAAGGGCTCCCCACCTGAAGCCAAGGGTGCGTGGCCTATACTGGGTCACCTTCCTTTGTTAGGAGGTTCCACACCTCCTCACATAGCTTTGGGAGCCATGGCGGACAAGTATGGACCCATTTTCACCATCCGCGTTGGTGTGTCTATCCGTCATCGTCACCTTGGAGTTGCTCTCTCAATCCGGAAGTTGGAGCTGCTCAAGCACATTCGAGTATCGGAAGTGACTACTTTCTTGGAAGAATTGCACAAAACTTGGAGTACAAGACAAAGGGAGGGCTCGAACGATGGAGTGGTTGTAGAGCTGAAGCAATGGTTTGGGGACATGACGCTGAACGTGCTTGTCAGAATGGTGACCGGAAAGCGGTATTCAGTGGCTGCCGATGAGGATGAGAAGAAAGAAGCGCGTAGGGTTCAGAATGCATTGAGGGAGTTTTTTCATTATGCGGGGCTGTTTTTGGTGGGTGATGCGGTTCCTTGTCTGCGGTGGTTGGATTTGGGTGGACATGAGAAGGCAATAAAGAAAACTGCAAAGGAATTGGACACCATTGTTGGCGAGTGGGTTGAAGAGCATAAGCGGAGGAGAGCAAAAGGTGATGCAAAAGGAGAGCAGGACTTCATAGATGCGATGCTTTCTGTGCTTGATGGTGCAGAACTTGGCGGGTTTGATGCTGATACGATCAACAAAGCCACAAGCTTGAATATGATTGCAGCGGGTAGTGATACCATCATGGTGACATTGACATGGGCAATATCGTTATTGTTGAACAACTCTCGCGCGTTTTGGAAAGAGCCCTAA

Protein Analysis

298

Amino Acids

33.1

Weight (kDa)

8.82

Isoelectric Point (pI)

40.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 100 - 289 6.6e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 4 cut(s) 231, 502, 873, 875
AccIII TCCGGA 1 cut(s) 279
AciI CCGC 9 cut(s) 200, 229, 460, 542, 566, 580, 673, 756, 809
AcuI CTGAAG 2 cut(s) 135, 422
AfaI GTAC 1 cut(s) 358
AfiI CCNNNNNNNGG 4 cut(s) 140, 158, 286, 459
AgsI TTSAA 3 cut(s) 662, 796, 862
AluBI AGCT 5 cut(s) 89, 185, 292, 400, 792
AluI AGCT 5 cut(s) 89, 185, 292, 400, 792
AlwNI CAGNNNCTG 1 cut(s) 473
Aor13HI TCCGGA 1 cut(s) 279
AoxI GGCC 1 cut(s) 131
ApeKI GCWGC 5 cut(s) 32, 89, 292, 473, 806
AspLEI GCGC 2 cut(s) 502, 875
AspS9I GGNCC 1 cut(s) 212
AsuHPI GGTGA 7 cut(s) 137, 214, 248, 460, 572, 701, 841
AvaII GGWCC 1 cut(s) 212
BanII GRGCYC 3 cut(s) 107, 377, 891
BbvI GCAGC 5 cut(s) 19, 76, 279, 460, 818
BccI CCATC 6 cut(s) 35, 75, 233, 377, 734, 830
BisI GCNGC 5 cut(s) 33, 90, 293, 474, 807
BlsI GCNGC 5 cut(s) 34, 91, 294, 475, 808
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 1 cut(s) 212
BmiI GGNNCC 5 cut(s) 106, 166, 193, 214, 570
BmrI ACTGGG 1 cut(s) 149
BmsI GCATC 5 cut(s) 553, 682, 709, 714, 754
BmuI ACTGGG 1 cut(s) 149
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpuEI CTTGAG 1 cut(s) 281
BsaJI CCNNGG 3 cut(s) 120, 195, 259
BsaWI WCCGGW 2 cut(s) 279, 452
BsaXI ACNNNNNCTCC 4 cut(s) 89, 119, 378, 408
Bsc4I CCNNNNNNNGG 4 cut(s) 140, 158, 286, 459
Bse1I ACTGG 1 cut(s) 144
Bse3DI GCAATG 1 cut(s) 413
BseAI TCCGGA 1 cut(s) 279
BseDI CCNNGG 3 cut(s) 120, 195, 259
BseGI GGATG 2 cut(s) 225, 490
BseLI CCNNNNNNNGG 4 cut(s) 140, 158, 286, 459
BseMI GCAATG 1 cut(s) 413
BseNI ACTGG 1 cut(s) 144
BseRI GAGGAG 2 cut(s) 165, 691
BseXI GCAGC 5 cut(s) 19, 76, 279, 460, 818
BsgI GTGCAG 1 cut(s) 765
Bsh1236I CGCG 4 cut(s) 231, 502, 873, 875
BshFI GGCC 1 cut(s) 133
BsiSI CCGG 2 cut(s) 280, 453
BslFI GGGAC 1 cut(s) 431
BslI CCNNNNNNNGG 4 cut(s) 140, 158, 286, 459
BsmFI GGGAC 1 cut(s) 431
BsmI GAATGC 1 cut(s) 520
BsnI GGCC 1 cut(s) 133
Bsp1286I GDGCHC 3 cut(s) 107, 377, 891
Bsp13I TCCGGA 1 cut(s) 279
Bsp143I GATC 1 cut(s) 774
Bsp19I CCATGG 1 cut(s) 195
BspACI CCGC 9 cut(s) 200, 229, 460, 542, 566, 580, 673, 756, 809
BspANI GGCC 1 cut(s) 133
BspEI TCCGGA 1 cut(s) 279
BspFNI CGCG 4 cut(s) 231, 502, 873, 875
BspLI GGNNCC 5 cut(s) 106, 166, 193, 214, 570
BspQI GCTCTTC 1 cut(s) 657
BsrDI GCAATG 1 cut(s) 413
BsrI ACTGG 1 cut(s) 144
BssECI CCNNGG 3 cut(s) 120, 195, 259
BssMI GATC 1 cut(s) 774
BssT1I CCWWGG 3 cut(s) 120, 195, 259
Bst6I CTCTTC 1 cut(s) 657
BstDSI CCRYGG 1 cut(s) 195
BstEII GGTNACC 2 cut(s) 143, 448
BstENI CCTNNNNNAGG 1 cut(s) 156
BstF5I GGATG 2 cut(s) 225, 490
BstFNI CGCG 4 cut(s) 231, 502, 873, 875
BstHHI GCGC 2 cut(s) 502, 875
BstKTI GATC 1 cut(s) 777
BstMBI GATC 1 cut(s) 774
BstMWI GCNNNNNNNGC 5 cut(s) 125, 191, 298, 433, 733
BstPI GGTNACC 2 cut(s) 143, 448
BstUI CGCG 4 cut(s) 231, 502, 873, 875
BstV1I GCAGC 5 cut(s) 19, 76, 279, 460, 818
BsuRI GGCC 1 cut(s) 133
BtgI CCRYGG 1 cut(s) 195
BtgZI GCGATG 2 cut(s) 13, 737
BtsCI GGATG 2 cut(s) 225, 490
BtsIMutI CAGTG 1 cut(s) 474
CaiI CAGNNNCTG 1 cut(s) 473
CfoI GCGC 2 cut(s) 502, 875
Cfr13I GGNCC 1 cut(s) 212
CseI GACGC 1 cut(s) 433
Csp6I GTAC 1 cut(s) 357
CviAII CATG 5 cut(s) 196, 421, 602, 826, 840
CviQI GTAC 1 cut(s) 357
DpnI GATC 1 cut(s) 776
DpnII GATC 1 cut(s) 774
Eam1104I CTCTTC 1 cut(s) 657
EarI CTCTTC 1 cut(s) 657
EciI GGCGGA 1 cut(s) 215
Eco130I CCWWGG 3 cut(s) 120, 195, 259
Eco24I GRGCYC 3 cut(s) 107, 377, 891
Eco47I GGWCC 1 cut(s) 212
Eco57I CTGAAG 2 cut(s) 135, 422
Eco91I GGTNACC 2 cut(s) 143, 448
EcoNI CCTNNNNNAGG 1 cut(s) 156
EcoO65I GGTNACC 2 cut(s) 143, 448
EcoT14I CCWWGG 3 cut(s) 120, 195, 259
EcoT22I ATGCAT 1 cut(s) 520
EcoT38I GRGCYC 3 cut(s) 107, 377, 891
ErhI CCWWGG 3 cut(s) 120, 195, 259
FaeI CATG 5 cut(s) 199, 424, 605, 829, 843
FaqI GGGAC 1 cut(s) 431
FatI CATG 5 cut(s) 195, 420, 601, 825, 839
FauI CCCGC 3 cut(s) 535, 749, 802
Fnu4HI GCNGC 5 cut(s) 33, 90, 293, 474, 807
FokI GGATG 2 cut(s) 212, 497
FriOI GRGCYC 3 cut(s) 107, 377, 891
Fsp4HI GCNGC 5 cut(s) 33, 90, 293, 474, 807
GlaI GCGC 2 cut(s) 501, 874
GluI GCNGC 5 cut(s) 33, 90, 293, 474, 807
HaeIII GGCC 1 cut(s) 133
HapII CCGG 2 cut(s) 280, 453
HgaI GACGC 1 cut(s) 433
HhaI GCGC 2 cut(s) 502, 875
Hin1II CATG 5 cut(s) 199, 424, 605, 829, 843
Hin6I GCGC 2 cut(s) 500, 873
HinP1I GCGC 2 cut(s) 500, 873
HindIII AAGCTT 1 cut(s) 790
HinfI GANTC 1 cut(s) 5
HpaII CCGG 2 cut(s) 280, 453
HphI GGTGA 7 cut(s) 137, 214, 248, 460, 572, 701, 841
Hpy166II GTNNAC 1 cut(s) 599
Hpy188I TCNGA 3 cut(s) 316, 443, 513
Hpy188III TCNNGA 2 cut(s) 75, 280
Hpy8I GTNNAC 1 cut(s) 599
HpyAV CCTTC 2 cut(s) 158, 601
HpyCH4IV ACGT 1 cut(s) 432
HpyCH4V TGCA 7 cut(s) 20, 343, 518, 626, 695, 746, 806
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 191, 298, 433, 733
HpySE526I ACGT 1 cut(s) 432
Hsp92II CATG 5 cut(s) 199, 424, 605, 829, 843
HspAI GCGC 2 cut(s) 500, 873
Kpn2I TCCGGA 1 cut(s) 279
Kzo9I GATC 1 cut(s) 774
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 3 cut(s) 110, 191, 289
LpnPI CCDG 6 cut(s) 21, 125, 126, 293, 466, 692
Lsp1109I GCAGC 5 cut(s) 19, 76, 279, 460, 818
LweI GCATC 5 cut(s) 553, 682, 709, 714, 754
MaeII ACGT 1 cut(s) 432
MaeIII GTNAC 5 cut(s) 143, 254, 319, 448, 829
MalI GATC 1 cut(s) 776
MboI GATC 1 cut(s) 774
MboII GAAGA 4 cut(s) 90, 347, 502, 674
MhlI GDGCHC 3 cut(s) 107, 377, 891
MluCI AATT 2 cut(s) 338, 632
MmeI TCCRAC 2 cut(s) 267, 567
MnlI CCTC 7 cut(s) 155, 183, 186, 364, 475, 516, 669
Mph1103I ATGCAT 1 cut(s) 520
MroI TCCGGA 1 cut(s) 279
MslI CAYNNNNRTG 3 cut(s) 79, 827, 838
MspA1I CMGCKG 1 cut(s) 809
MspI CCGG 2 cut(s) 280, 453
Mva1269I GAATGC 1 cut(s) 520
MvnI CGCG 4 cut(s) 231, 502, 873, 875
MwoI GCNNNNNNNGC 5 cut(s) 125, 191, 298, 433, 733
NcoI CCATGG 1 cut(s) 195
NdeII GATC 1 cut(s) 774
NlaIII CATG 5 cut(s) 199, 424, 605, 829, 843
NlaIV GGNNCC 5 cut(s) 106, 166, 193, 214, 570
NmuCI GTSAC 5 cut(s) 143, 254, 319, 448, 829
NsiI ATGCAT 1 cut(s) 520
PciSI GCTCTTC 1 cut(s) 657
PctI GAATGC 1 cut(s) 520
PfeI GAWTC 1 cut(s) 5
PkrI GCNGC 5 cut(s) 34, 91, 294, 475, 808
PspEI GGTNACC 2 cut(s) 143, 448
PspN4I GGNNCC 5 cut(s) 106, 166, 193, 214, 570
PspPI GGNCC 1 cut(s) 212
PstNI CAGNNNCTG 1 cut(s) 473
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 3 cut(s) 79, 827, 838
SapI GCTCTTC 1 cut(s) 657
SatI GCNGC 5 cut(s) 33, 90, 293, 474, 807
Sau3AI GATC 1 cut(s) 774
Sau96I GGNCC 1 cut(s) 212
SduI GDGCHC 3 cut(s) 107, 377, 891
SfaNI GCATC 5 cut(s) 553, 682, 709, 714, 754
SinI GGWCC 1 cut(s) 212
SmiMI CAYNNNNRTG 3 cut(s) 79, 827, 838
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
Sse9I AATT 2 cut(s) 338, 632
SsiI CCGC 9 cut(s) 200, 229, 460, 542, 566, 580, 673, 756, 809
StyI CCWWGG 3 cut(s) 120, 195, 259
TaiI ACGT 1 cut(s) 435
TaqI TCGA 2 cut(s) 307, 377
TasI AATT 2 cut(s) 338, 632
TatI WGTACW 1 cut(s) 356
TfiI GAWTC 1 cut(s) 5
TscAI CASTG 1 cut(s) 474
TseFI GTSAC 5 cut(s) 143, 254, 319, 448, 829
TseI GCWGC 5 cut(s) 32, 89, 292, 473, 806
Tsp45I GTSAC 5 cut(s) 143, 254, 319, 448, 829
TspDTI ATGAA 2 cut(s) 524, 703
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 474
VpaK11BI GGWCC 1 cut(s) 212
XagI CCTNNNNNAGG 1 cut(s) 156
Zsp2I ATGCAT 1 cut(s) 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.